View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2371_high_13 (Length: 459)
Name: NF2371_high_13
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2371_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 136 - 436
Target Start/End: Complemental strand, 25728672 - 25728377
Alignment:
| Q |
136 |
gttcaatgtaactatgcaaaatcaattaannnnnnnnngagttttgagactttatctaattctagcgagtcaccaaaattcaattccctcaaataaatta |
235 |
Q |
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| T |
25728672 |
gttcaatgtaactatgcaaaatcaattatttttctttagagttttgagactttatctaattctagcgagtcaccaaaattcaattccctcaaataaatt- |
25728574 |
T |
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| Q |
236 |
attgtatacaaaaatatttggcaaagtcaattagcttctcccgatcacttnnnnnnnttaggatttggatgttattctattgtaattggacggtgcacat |
335 |
Q |
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| T |
25728573 |
---gtatacaaaaatacttggcaaagtcaattagcttctcccgatcacttaaaaaa-ttaggatttggatgttattctattgtaattggacggtgcacat |
25728478 |
T |
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| Q |
336 |
gccttgctgggttatacaaaattagagagagagccatttttgatttgtacaaaataaaatcaattatttagatgtaatgattccacacgtggtgtacctt |
435 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25728477 |
gccttgctgggttatacaaaattagagagagagccatttttgatttatacaaaataaaatcaattatttagatgtaatgattccacacgtggtgtacctt |
25728378 |
T |
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