View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2371_high_16 (Length: 436)
Name: NF2371_high_16
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2371_high_16 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 403; Significance: 0; HSPs: 57)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 1 - 419
Target Start/End: Complemental strand, 27570421 - 27570003
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaagtttttatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27570421 |
tatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaagtttttatt |
27570322 |
T |
|
| Q |
101 |
taaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27570321 |
taaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtccccctggtatcatcagaagggcatctttttctggaaaccgatcagcttc |
27570222 |
T |
|
| Q |
201 |
aaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcattt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27570221 |
aaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcattt |
27570122 |
T |
|
| Q |
301 |
caagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataacat |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27570121 |
caagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcctcaccattccttgcaccgaagatatctttcaacatataacat |
27570022 |
T |
|
| Q |
401 |
ctcgcatgaacgggatatg |
419 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
27570021 |
ctcgcatgaacgggatatg |
27570003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 398
Target Start/End: Original strand, 27420173 - 27420573
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaagttt---tt |
97 |
Q |
| |
|
|||||||||| | || ||||||||||| ||||||||||| |||||||||||||||||||||| || | ||||||||||| |||||||||||||| || |
|
|
| T |
27420173 |
tatatattcaaggctacaagcatttaggaccaacacaaaacattcacatcctaaagcattcagatttcaaaaacttggtctttgcttaaaagtttatttt |
27420272 |
T |
|
| Q |
98 |
atttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagc |
197 |
Q |
| |
|
|||| ||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||| |||||||||||| |
|
|
| T |
27420273 |
atttttaaaccatttcttctaaagttttaacacatacaacaatgggttttcgtttccctggtatcatcagaaaggcatcattttctgcaaaccgatcagc |
27420372 |
T |
|
| Q |
198 |
ttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttca |
297 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
27420373 |
ttcaaaatctgtggacgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatttaatccccgtatcatacttgagccaaccttca |
27420472 |
T |
|
| Q |
298 |
tttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataa |
397 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
27420473 |
tttcaaggcttgctgagtcaagttgaggaagagtttggatatgatcatcccatgggtggcctcaccattccttgcacggaagatgtctttcaacatataa |
27420572 |
T |
|
| Q |
398 |
c |
398 |
Q |
| |
|
| |
|
|
| T |
27420573 |
c |
27420573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 410
Target Start/End: Original strand, 27425597 - 27425989
Alignment:
| Q |
17 |
caagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaagtttttatttaaaaaccatttattc |
116 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||||| ||| | ||||||||| || ||||||| | || ||| ||||||| | | |||| |
|
|
| T |
27425597 |
caagcatttaggaccaacacaaatcattcacatcctaaaccattccaatttcaaaaacttgcttcttgcttacaggtctttttttaaaactgaat-attc |
27425695 |
T |
|
| Q |
117 |
tcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtg |
216 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||| ||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||||| ||| |
|
|
| T |
27425696 |
tcaagttttaacacatacaacaatgggttttcgttttgctggtatcatcagaaaggcatcattttctgcaaaccgatcagcttcgaaagctgtggacgtg |
27425795 |
T |
|
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| | |||||| |||||||||||||| |||||| |
|
|
| T |
27425796 |
ccaaagggatatcttgcagtatatgttggagagaaacaaaagcggtatgtgatcccaatatcatacttgaaccaaccatcatttcaagacttattgagtc |
27425895 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataacatctcgcatgaa |
410 |
Q |
| |
|
|| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||| ||||||||| |||| |
|
|
| T |
27425896 |
aatttgaggaagagtttggatatgatcatcccatgggtggcctcaccattccttgcaccgaggatgtatttcaacatatgacatctcgcttgaa |
27425989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 3 - 419
Target Start/End: Original strand, 27415394 - 27415807
Alignment:
| Q |
3 |
tatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaagttt-ttattt |
101 |
Q |
| |
|
|||||||| | || ||||||||||| ||||||||||| |||||||||||||||||||||| | | ||||||||| |||||||| || | | |||||| |
|
|
| T |
27415394 |
tatattcaaggctacaagcatttaggaccaacacaaaacattcacatcctaaagcattcagttttcaaaaacttg-ttattgctacaatttatcttattt |
27415492 |
T |
|
| Q |
102 |
aaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttca |
201 |
Q |
| |
|
||||| |||| ||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||| | ||| ||||||| || |||| | |||| |
|
|
| T |
27415493 |
taaaacaatttcttctcaagttttaacacatacaacaatgggttttcgtgtccctagtatcatcagaaagtcatcattttctgcaagccgagtaatttca |
27415592 |
T |
|
| Q |
202 |
aaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttc |
301 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||| ||||| | ||| | |||||||||| |||||||||| | |||||| || |||| |
|
|
| T |
27415593 |
aaagttgtggatgtgccaaagggatatcttgcagtgtatgttgga---aaacaaaagcgatttgtgatccccatatcatacttgaaccaaccatcgtttc |
27415689 |
T |
|
| Q |
302 |
aagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataacatc |
401 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||||| |||||||| |
|
|
| T |
27415690 |
aagacttgttgagtcaagctgaggaagagtttggatatgatcattccatgggtggcctcaccattccttgcacagaagatgtctttcaacacataacatc |
27415789 |
T |
|
| Q |
402 |
tcgcatgaacgggatatg |
419 |
Q |
| |
|
|||| ||||||| ||||| |
|
|
| T |
27415790 |
tcgcttgaacggaatatg |
27415807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 405
Target Start/End: Original strand, 27412441 - 27412836
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaagtttttatt |
100 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||||||||||||||||||||||| |||| ||| | ||||||||| || ||||||| |||| || | |
|
|
| T |
27412441 |
tatatattcatggctgcaagcatttaggacaaacacaaatcattcacatcctaaaccattttaatttcaaaaacttgcttcttgcttacaagtcttcct- |
27412539 |
T |
|
| Q |
101 |
taaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttc |
200 |
Q |
| |
|
| |||||||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| ||||||| ||| ||| |
|
|
| T |
27412540 |
--acaaccatttgaatttaagttctaacacatacaaaaatgggttttcgtttctctggtatcatcagaagggcatcattttctgcaaaccgagcagtttc |
27412637 |
T |
|
| Q |
201 |
aaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcattt |
300 |
Q |
| |
|
||||||||| || |||||||||||||| |||| || |||||||||||||||| ||| ||||||||| |||||||||| | |||||| | |||| |
|
|
| T |
27412638 |
aaaagctgttgacatgccaaagggatatattgccgtgtatgttggagagaaac------ggtttgtgatcccaatatcatacttgaaccaaccattattt |
27412731 |
T |
|
| Q |
301 |
caagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataacat |
400 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
27412732 |
caagacttattgagtcaagctgaagaagagtttggatatgatcatccaatgggtggcctcaccattccttgcacggaagatgtctttcaacatataacat |
27412831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 398
Target Start/End: Complemental strand, 27566322 - 27565926
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacacaaatcattcacatcctaaagcattcaaatctg-aaaaacttggttattgcttaaaagtttttat |
99 |
Q |
| |
|
|||||||||||| | ||||||||||| ||||||||||||||||||||||||||| ||||| ||| | ||||||||| || ||||||| |||| ||| | |
|
|
| T |
27566322 |
tatatattcatggttacaagcatttaggaccaacacaaatcattcacatcctaaaccattccaatttccaaaaacttgcttcttgcttacaagtcttttt |
27566223 |
T |
|
| Q |
100 |
ttaaaaaccatttattctcaagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagctt |
199 |
Q |
| |
|
| ||||||| || ||||||||| | ||| |||||| ||||||||||||||||||| |||| |||| ||||| ||| ||| |||||||||| ||| || |
|
|
| T |
27566222 |
t--aaaaccaatttttctcaagtttgaacgcatacagcaatgggttttcgtttccctagtattatcaaaagggcatcatttgttggaaaccgagcagttt |
27566125 |
T |
|
| Q |
200 |
caaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatt |
299 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| | ||| | |||||||||| |||||||| | | |||||| | || |
|
|
| T |
27566124 |
caaaagttgtggacgtgccaaagggatatcttgcagtgtatgttggagagaaacaaaagcgatttgtgatccccatatcatacctgaaccaaccattgtt |
27566025 |
T |
|
| Q |
300 |
tcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataac |
398 |
Q |
| |
|
|||||||||||||| |||| |||||||||| |||||||||||||| ||||||||| ||||||||||||| ||||||| |||| ||||||||||| |
|
|
| T |
27566024 |
tcaagacttgctgatacaagttgaggaagagcatggatatgatcatccaatgggtggcctcaccattccttgtggcgaagatgtcttccaacatataac |
27565926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 403
Target Start/End: Original strand, 27423010 - 27423392
Alignment:
| Q |
21 |
catttagaaccaacacaaatcattcacatcctaaag-cattca-aatctgaaaaacttggttattgcttaaaagtttttatttaaaaaccatttattctc |
118 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||| |||| ||| |||||||||||| |||||||| || ||||| | ||||||| || |||| |
|
|
| T |
27423010 |
catttagaaccaactctaatcattcacatcctaaaaacatttgcaatttgaaaaacttggctattgcttttaatttttttct--aaaaccacttcttcta |
27423107 |
T |
|
| Q |
119 |
aagtgttaacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgcc |
218 |
Q |
| |
|
| | ||||||||||||| ||||||| | |||||| ||||||| |||||||||| || ||||||| ||||||| || |||||||||| ||| |||| |
|
|
| T |
27423108 |
actttttaacacatacaacaatgggtatccgtttctctggtattatcagaagggcctcattttctgcaaaccgagcaatatcaaaagctgcggacatgcc |
27423207 |
T |
|
| Q |
219 |
aaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaa |
318 |
Q |
| |
|
|||| |||||||||| |||||||||||| |||||||||| ||| ||||||||| | |||||||||| | |||||||||||||||||| ||| |||||||| |
|
|
| T |
27423208 |
aaagagatatcttgctgtatatgttggatagaaacagacacggcatgtgatccgcatatcatacttgaaccaaccttcatttcaagaattgttgagtcaa |
27423307 |
T |
|
| Q |
319 |
gctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataacatctc |
403 |
Q |
| |
|
|| ||||||||||| || || ||||||||||||||||| ||||| |||||||||| |||||| | || ||||||||||| |||| |
|
|
| T |
27423308 |
gccgaggaagagtttggttacaatcatcccatgggtggcctcaccgttccttgcacggaagatgttttccaacatataacttctc |
27423392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 38 - 410
Target Start/End: Complemental strand, 27563689 - 27563309
Alignment:
| Q |
38 |
aatcattcacatcctaaagcattcaaatctgaaaaacttggttattgcttaaaagtttttat---------ttaaaaaccatttattctcaagtgttaac |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||| || ||||||||| ||||| |
|
|
| T |
27563689 |
aatcattcacatcctaaagcattcaaatttcaaaaacttggttattgcttaaaagtttttttgttctttttttaaaaa----ttcttctcaagttttaac |
27563594 |
T |
|
| Q |
129 |
acatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctt---tttctggaaaccgatcagcttcaaaagctgtggatgtgccaaaggga |
225 |
Q |
| |
|
||| || ||||||||||||||| ||||||||||| |||||| ||| | || || || |||||||| | |||||| |||||| ||||||||||| |
|
|
| T |
27563593 |
acactcagcaatgggttttcgtttacctggtatcattagaaggtcatcatcgtttacttcaagccgatcagttacaaaagttgtggacgtgccaaagggc |
27563494 |
T |
|
| Q |
226 |
tatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaagctgagg |
325 |
Q |
| |
|
||||||||||| || |||||||| ||||| | | | ||||||||||||||||||||| | |||| | | |||||||| |||||||||||||| || | |
|
|
| T |
27563493 |
tatcttgcagtgtacgttggagataaacaaaagagaattgtgatccccgtatcatacttgaaccaaacattgtttcaagatttgctgagtcaagccgaag |
27563394 |
T |
|
| Q |
326 |
aagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataacatctcgcatgaa |
410 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| |||| ||||||||||| |||||| ||||||||||||||| |||||| |||| |
|
|
| T |
27563393 |
aagagtttggatatgatcatccaatgggtggcctcacaattccttgcactgaagatgcctttcaacatataacttctcgcttgaa |
27563309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 219 - 397
Target Start/End: Complemental strand, 27468481 - 27468303
Alignment:
| Q |
219 |
aaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaa |
318 |
Q |
| |
|
|||||| ||| |||| || |||||||||||||||| | ||||| ||| |||| ||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
27468481 |
aaagggctatgttgcggtgtatgttggagagaaactggtgcggtttgtagtccctgtatcatacttaaaccaaccttcatttcaagacttgttgagtcaa |
27468382 |
T |
|
| Q |
319 |
gctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataa |
397 |
Q |
| |
|
| |||||||| || |||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||||| |
|
|
| T |
27468381 |
tccgaggaagaatttggatatgatcatcccatgggtggcctcaccattccttgcacggaagatgtcttccaacatataa |
27468303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 219 - 419
Target Start/End: Complemental strand, 27475733 - 27475533
Alignment:
| Q |
219 |
aaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaa |
318 |
Q |
| |
|
|||||| ||| |||| || ||||||||||||||| | |||||| ||| | || ||||||||||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
27475733 |
aaagggctatgttgccgtgtatgttggagagaaattggcgcggtttgtagttcctgtatcatacttgaatcaaccttcatttcaagacttgttgagtcaa |
27475634 |
T |
|
| Q |
319 |
gctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataacatctcgcatgaacgggatat |
418 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||| ||||||||||| ||| || |||| ||| ||| |
|
|
| T |
27475633 |
gccgaggaagagtttggatatgatcatcccatgggtggcctcaccattccttgctccgaagatgtcttccaacatataacttcttgcttgaatgggctat |
27475534 |
T |
|
| Q |
419 |
g |
419 |
Q |
| |
|
| |
|
|
| T |
27475533 |
g |
27475533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 398
Target Start/End: Original strand, 27506682 - 27506863
Alignment:
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
|||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||| | |||||||| ||||| || |
|
|
| T |
27506682 |
ccaaagggctatgttgcagtatatgtcggagagaaacagacgcggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagaattgctacatc |
27506781 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataac |
398 |
Q |
| |
|
|||| || ||||| || ||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||| ||||| |
|
|
| T |
27506782 |
aagcggaagaagaatttggatatgatcatcccatgggtggactcaccattccttgcactgaagatgtctttcaacacataac |
27506863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 238 - 398
Target Start/End: Original strand, 27503927 - 27504087
Alignment:
| Q |
238 |
tatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaagctgaggaagagttcggat |
337 |
Q |
| |
|
||||||||||||||| | |||||| ||| | || ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||||||| |||| |
|
|
| T |
27503927 |
tatgttggagagaaattggcgcggtttgtagttcctgtatcatacttgaaccaaccttcatttcaagacttgttgagtcaagccgaggaagagtttggat |
27504026 |
T |
|
| Q |
338 |
atgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataac |
398 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
27504027 |
atgatcatccaatgggtggcctcaccattccttgcaccgaagatgtcttccaacacataac |
27504087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 230 - 398
Target Start/End: Original strand, 27524521 - 27524689
Alignment:
| Q |
230 |
ttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaagctgaggaaga |
329 |
Q |
| |
|
||||||| |||||||||||||||| |||||||| | | || |||||||| || | |||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
27524521 |
ttgcagtgtatgttggagagaaactgacgcggttcatagttcctgtatcatatttgaaccaaccttcatttcaagacttgttgaatcaagctgaggaaga |
27524620 |
T |
|
| Q |
330 |
gttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataac |
398 |
Q |
| |
|
||| |||||||||||||| ||||||||| |||||||||| |||||||||||| |||| ||||||||||| |
|
|
| T |
27524621 |
gtttggatatgatcatccaatgggtggcctcaccattccgtgcaccgaagatgtcttccaacatataac |
27524689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 125 - 373
Target Start/End: Complemental strand, 27445033 - 27444794
Alignment:
| Q |
125 |
taacacatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaaggg |
224 |
Q |
| |
|
|||||||||||| ||||||||||||||| | |||||||||||||||| ||| ||||| | || ||||||||| ||||||||||||||||| |
|
|
| T |
27445033 |
taacacatacaagaatgggttttcgtttaaccggtatcatcagaaggg---------ctgcaaaccaaacatcttcaaaaggcgtggatgtgccaaaggg |
27444943 |
T |
|
| Q |
225 |
atatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaagctgag |
324 |
Q |
| |
|
||||||||||||||| ||||||||| || || | ||| ||||||||| |||||||||| |||||| | ||||||||||| || ||| |||||| ||| |
|
|
| T |
27444942 |
atatcttgcagtatacgttggagaggaaatgaagaggtttgtgatcccaatatcatacttgagccaatcatcatttcaagaattattgaatcaagccgag |
27444843 |
T |
|
| Q |
325 |
gaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
||| | ||||||||||| ||||| |||||||| |||| |||||||||| |
|
|
| T |
27444842 |
gaacaattcggatatgaccatccaatgggtggtctcacaattccttgca |
27444794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 410
Target Start/End: Complemental strand, 27497496 - 27497285
Alignment:
| Q |
199 |
tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat |
298 |
Q |
| |
|
|||||| |||| || || |||||||| ||| ||||||| ||||||||||| ||||| | ||||| ||||||||| | |||||||||| |||||| | | |
|
|
| T |
27497496 |
tcaaaatctgtagaagttccaaagggctatgttgcagtgtatgttggagataaacaaaagcggtttgtgatccctatctcatacttaaaccaaccattgt |
27497397 |
T |
|
| Q |
299 |
ttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataac |
398 |
Q |
| |
|
||||| | ||| |||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| ||| || |||| |||| ||||| |
|
|
| T |
27497396 |
ttcaatatttgttgagtcaagctgaggaagagtttggatatgatcatcccacaggtggcctcaccattccttgcactgaaaatgtcttccaacgcataac |
27497297 |
T |
|
| Q |
399 |
atctcgcatgaa |
410 |
Q |
| |
|
|||||| |||| |
|
|
| T |
27497296 |
ttctcgcttgaa |
27497285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 219 - 397
Target Start/End: Original strand, 27514877 - 27515055
Alignment:
| Q |
219 |
aaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaa |
318 |
Q |
| |
|
|||||| ||| |||| || |||||||||||||||| | ||||| ||| |||| ||||||||||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
27514877 |
aaagggctatgttgcggtgtatgttggagagaaactggtgcggtttgtagtccctgtatcatacttgaatcaaccttcatttcaagacttgttgagtcaa |
27514976 |
T |
|
| Q |
319 |
gctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataa |
397 |
Q |
| |
|
| |||||||| || |||||||||||||||||||||||| ||||||||||||| || |||||| |||| || ||||||| |
|
|
| T |
27514977 |
tccgaggaagaatttggatatgatcatcccatgggtggcctcaccattccttgtacagaagatgtcttccagcatataa |
27515055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 189 - 398
Target Start/End: Original strand, 27585644 - 27585853
Alignment:
| Q |
189 |
ccgatcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagc |
288 |
Q |
| |
|
|||||||| |||||||| |||||| ||||||||||||||||| ||||| | ||||| || ||||| | | | | ||||||||||||||||||||| | | |
|
|
| T |
27585644 |
ccgatcagtttcaaaagttgtggacgtgccaaagggatatctcgcagtgtgcgttggtgataaacaaaagagatttgtgatccccgtatcatacttgaac |
27585743 |
T |
|
| Q |
289 |
caaccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttc |
388 |
Q |
| |
|
||||| | |||||||| ||| |||||||||| || |||||||| |||||||||||||| ||||| || |||||||||||||||| |||||| ||| |
|
|
| T |
27585744 |
caaccattgtttcaagatttgatgagtcaagccgaagaagagtttggatatgatcatccaatgggaggtctcaccattccttgcacagaagatgccttca |
27585843 |
T |
|
| Q |
389 |
aacatataac |
398 |
Q |
| |
|
|||||||||| |
|
|
| T |
27585844 |
aacatataac |
27585853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 217 - 398
Target Start/End: Original strand, 27527145 - 27527322
Alignment:
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
|||||||| |||||||| || ||||||||||| ||||||| |||| ||||||||| ||||| |||||| |||||| || |||| ||| |||||||||| |
|
|
| T |
27527145 |
ccaaagggctatcttgcggtgtatgttggagataaacagaaacggtttgtgatcccaatatcacacttaaaccaaccatcgtttctagagttgctgagtc |
27527244 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataac |
398 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||| | |||||||||| |||||| |||| ||||||||||| |
|
|
| T |
27527245 |
aagctgaggaagagtttggatatgatcatcccatggg----atcccaattccttgcagtgaagatgtcttccaacatataac |
27527322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 219 - 398
Target Start/End: Original strand, 27508838 - 27509017
Alignment:
| Q |
219 |
aaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaa |
318 |
Q |
| |
|
|||||| ||| ||||||| |||||||||||||||| |||||| | ||| | || || ||||| || | |||||||||||||||||||||| ||| ||| |
|
|
| T |
27508838 |
aaagggctatgttgcagtgtatgttggagagaaactgacgcgttttgtcgttcctgtgtcatatttgaaccaaccttcatttcaagacttgttgaatcag |
27508937 |
T |
|
| Q |
319 |
gctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataac |
398 |
Q |
| |
|
|||||||||||||| |||||||||||||| | ||||||| |||||||||| ||| |||||||| | || ||||||||||| |
|
|
| T |
27508938 |
gctgaggaagagtttggatatgatcatccaacgggtggcctcaccattccatgctccgaagatgtgttccaacatataac |
27509017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 217 - 419
Target Start/End: Complemental strand, 27479039 - 27478837
Alignment:
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
|||||||| ||| ||||||| ||||||||||||||||||| ||||| ||| |||| |||||||||| | |||||| | |||||||| ||||| || |
|
|
| T |
27479039 |
ccaaagggctatgttgcagtgtatgttggagagaaacagaagcggtttgttgtcccaatatcatacttgaaccaaccattgtttcaagaattgctacatc |
27478940 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatataacatctcgcatgaacgggat |
416 |
Q |
| |
|
|||| || ||||| || |||||||||||||||||||||||| |||||||||||||| |||||||| | || ||||||||||| ||| || |||| ||| | |
|
|
| T |
27478939 |
aagcggaagaagaatttggatatgatcatcccatgggtggcctcaccattccttgctccgaagatgtgttccaacatataacttcttgcttgaatgggct |
27478840 |
T |
|
| Q |
417 |
atg |
419 |
Q |
| |
|
||| |
|
|
| T |
27478839 |
atg |
27478837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 129 - 373
Target Start/End: Original strand, 27557394 - 27557629
Alignment:
| Q |
129 |
acatacaaaaatgggttttcgtttccctggtatcatcagaagggaatctttttctggaaaccgatcagcttcaaaagctgtggatgtgccaaagggatat |
228 |
Q |
| |
|
||||| || ||||||||||||||| |||| |||||||||||||| ||| ||||| | || ||||||| | |||||||||||||| ||||||| |
|
|
| T |
27557394 |
acatataagaatgggttttcgtttacctgttatcatcagaagggcatc---------aaaccaagcatcttcaaagggtgtggatgtgccaaggggatat |
27557484 |
T |
|
| Q |
229 |
cttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaagctgaggaag |
328 |
Q |
| |
|
||||| ||||||||||||||| || || | ||| ||||||||| | |||||||||| |||||| ||||||||||| ||||||| ||||||||||||| |
|
|
| T |
27557485 |
cttgccgtatatgttggagaggaaatgaagaggtttgtgatcccaatgtcatacttaaaccaaccatcatttcaagaattgctgaatcaagctgaggaac |
27557584 |
T |
|
| Q |
329 |
agttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
| || | ||||| |||||| |||||||| |||| ||||| |||| |
|
|
| T |
27557585 |
aatttgaatatgttcatccaatgggtggtctcactattccatgca |
27557629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 381
Target Start/End: Original strand, 17970278 - 17970447
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
|||||||||||||||||||||| || || ||||||||| || || ||||| ||||||||| |||||||| | |||| ||||||||||| ||||||| |
|
|
| T |
17970278 |
atgtgccaaagggatatcttgcggtgtacgttggagaggaaatgaagcggtttgtgatccctacgtcatacttgaaccaaacttcatttcaatacttgct |
17970377 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagat |
381 |
Q |
| |
|
||||| || |||||||| |||||||| |||||||| ||||||||| |||| ||||||||||| |||||| |
|
|
| T |
17970378 |
gagtcgggcagaggaagaattcggatacgatcatccaatgggtggcctcacaattccttgcacagaagat |
17970447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 192 - 373
Target Start/End: Complemental strand, 27500519 - 27500338
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| |||||||| ||||||| || ||||| |||||||| ||||| || || ||||||||| || ||| | ||||||||| |||||||||||| |||| |
|
|
| T |
27500519 |
atcatcttcaaaatctgtggacgtaccaaaaggatatctagcagtgtacgtaggagagaaaatgaagcgatttgtgatccctatatcatacttaaaccaa |
27500420 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
|||||| ||||| |||||||| ||| |||| ||| ||||||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
27500419 |
agttcattccaagaattgctgagccaatctgaagaacagttcggatatgaccatccaatgggtggcatcactattccttgca |
27500338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 392
Target Start/End: Complemental strand, 27486099 - 27485924
Alignment:
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
|||||||| ||| ||||||| ||||||||||||||||||| ||||| ||| |||| |||||||||| | |||||| | |||||||| ||||| || |
|
|
| T |
27486099 |
ccaaagggctatgttgcagtgtatgttggagagaaacagaagcggtttgttgtcccaatatcatacttgaaccaaccattgtttcaagaattgctacatc |
27486000 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaaca |
392 |
Q |
| |
|
|||| || ||||| || |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |
|
|
| T |
27485999 |
aagcggaagaagaatttggatatgatcatcccatgggtggcctcaccattccttgcactgaaggcgtctttcaaca |
27485924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 192 - 373
Target Start/End: Complemental strand, 27526293 - 27526112
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| ||||||||| ||| ||||| |||||||||||||| ||||| ||||||||||||||| || ||||| |||||| || ||||||||||| | |||| |
|
|
| T |
27526293 |
atcatcttcaaaaggtgtcgatgttccaaagggatatctagcagtgtatgttggagagaaaatgaagcggtttgtgattcctgtatcatacttgaaccaa |
27526194 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
| ||||| ||||| ||| |||| |||||||||||| | || | |||||||||||| | |||||| |||| |||||||||| |
|
|
| T |
27526193 |
acctcattccaagaattgttgagccaagctgaggaacaatttgaatatgatcatccaacgggtggtctcactattccttgca |
27526112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 369
Target Start/End: Original strand, 27489946 - 27490096
Alignment:
| Q |
219 |
aaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaa |
318 |
Q |
| |
|
|||||| ||| ||| ||| ||||||||||||||||| | |||| ||| |||| || |||||||||| | |||| ||||||||||| ||| ||| |||| |
|
|
| T |
27489946 |
aaagggctatgttgtagtgtatgttggagagaaacaaaaacggtttgtagtccctgtgtcatacttaaacaaaccatcatttcaagatttgttgaatcaa |
27490045 |
T |
|
| Q |
319 |
gctgaggaagagttcggatatgatcatcccatgggtggcatcaccattcct |
369 |
Q |
| |
|
|| ||||||||||| |||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
27490046 |
gccgaggaagagtttggatatgatcatccaatgggtggcctcaccattcct |
27490096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 192 - 373
Target Start/End: Original strand, 27486942 - 27487123
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||||||| ||||| || || ||||||||| || ||||| ||||||||| |||||||||||| |||| |
|
|
| T |
27486942 |
atcatcttcaaaagctgtggacgttccaaagggatatctagcagtgtacgtaggagagaaaatgaagcggtttgtgatccctttatcatacttaaaccaa |
27487041 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
|| || |||||||| ||| ||| |||||||| ||| | || | |||||||||||| |||||||| | || |||||||||| |
|
|
| T |
27487042 |
ccatcgtttcaagaattgttgaaccaagctgaagaacaatttgaatatgatcatccaatgggtggtcttactattccttgca |
27487123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 197 - 347
Target Start/End: Original strand, 27554273 - 27554423
Alignment:
| Q |
197 |
cttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttc |
296 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||||||||||||| || || ||||| |||||| | | || | ||||||||||| || |
|
|
| T |
27554273 |
cttcaaaaggagtggatgtgccaaagggataccttgcagtatatgttggagaggaaatgaagcggtttgtgatatcaatttctttgttaagccaaccatc |
27554372 |
T |
|
| Q |
297 |
atttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcc |
347 |
Q |
| |
|
|||||||| ||||||| ||||||||||||| | || |||||||||||||| |
|
|
| T |
27554373 |
gtttcaagaattgctgaatcaagctgaggaacaatttggatatgatcatcc |
27554423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 197 - 372
Target Start/End: Original strand, 27498379 - 27498554
Alignment:
| Q |
197 |
cttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttc |
296 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| |||||||||||||||||| || || || | ||||||||| |||||||||| | |||||| || |
|
|
| T |
27498379 |
cttcaaaaggcgtggacatgccaaagggatatctagcagtatatgttggagaggaaatgaaacgttttgtgatccctatatcatacttgaaccaaccatc |
27498478 |
T |
|
| Q |
297 |
atttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgc |
372 |
Q |
| |
|
|| ||||||||| ||| ||||| |||||| | |||| |||||||||||| |||||||| |||| ||||||||| |
|
|
| T |
27498479 |
gttccaagacttgttgaaccaagccgaggaacaattcgaatatgatcatccaatgggtggtctcactattccttgc |
27498554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 356
Target Start/End: Complemental strand, 27502988 - 27502824
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||| || ||||| |||||||| || ||||| |||||| || | ||||| || | ||| |
|
|
| T |
27502988 |
atcatcttcaaaaggcttggatgtgccaaaaggatatcttgccgtttatgtaggagagaagatgaagcggtttgtgattccaatgtcatatttgaatcaa |
27502889 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtgg |
356 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||| || |||||||| ||||| |||||||| |
|
|
| T |
27502888 |
acttcatttcaagacttgctgagccaagctgtggaagaatttggatatgaccatccaatgggtgg |
27502824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 27431309 - 27431148
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| || || || | ||| ||||||||| |||||||||| | |||||| ||||||||||| ||| | |
|
|
| T |
27431309 |
atgtgccaaagggatatattgcagtatatgttggggatgaaatgaagaggtttgtgatcccaatatcatacttgaaccaaccgtcatttcaagaattgtt |
27431210 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
|| |||||| |||||| | || |||||||| ||||| | ||||| |||| |||||||||| |
|
|
| T |
27431209 |
gaatcaagccgaggaacaatttggatatgaccatccaaccggtggtctcacaattccttgca |
27431148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 373
Target Start/End: Original strand, 27476646 - 27476827
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| |||||||| | ||||| || |||||||||||||| ||||| |||||||| |||||| || ||||| |||||| || ||||||||||| | |||| |
|
|
| T |
27476646 |
atcatcttcaaaaaccgtggacgttccaaagggatatctagcagtgtatgttggtgagaaaatgaagcggtttgtgattcctgtatcatacttgaaccaa |
27476745 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
| ||||| ||||| ||||||| ||| ||||||| | || | |||||||||||| |||||||| | || |||||||||| |
|
|
| T |
27476746 |
acctcattccaagaactgctgagccaaagtgaggaacaatttgaatatgatcatccaatgggtggtctaactattccttgca |
27476827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 373
Target Start/End: Original strand, 27479860 - 27480041
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| ||||||||| | |||| |||||||| || ||||| |||||||| || ||||||||| || ||| | |||||| || ||||||||||| | |||| |
|
|
| T |
27479860 |
atcatcttcaaaaggtttggacgtgccaaaaggctatctagcagtatacgtaggagagaaaatgaagcgttttgtgattcctgtatcatacttgaaccaa |
27479959 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
| ||||| ||| | ||| ||| |||||||||||| | || | |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
27479960 |
acatcattccaaaagttgttgaaccaagctgaggaacaatttgaatatgatcatccaatgggtggtctcaccattccttgca |
27480041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 373
Target Start/End: Complemental strand, 27505883 - 27505702
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| ||||||||| | |||| ||||||||||| ||||| ||||| || || ||||||||| || ||||| |||||| || ||||||||||| | |||| |
|
|
| T |
27505883 |
atcatcttcaaaaggtttggaggtgccaaaggggtatctagcagtgtacgtaggagagaaaatgaagcggtttgtgattcctgtatcatacttgaaccaa |
27505784 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
| ||||| ||||| ||| ||| |||||||||||| | || | |||||| ||||| |||||||| |||| |||||||||| |
|
|
| T |
27505783 |
acctcattccaagaattgttgaaccaagctgaggaacaatttgaatatgaccatccaatgggtggtctcactattccttgca |
27505702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 373
Target Start/End: Complemental strand, 27513957 - 27513776
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| ||||||||||||| || |||||||| |||||||| ||||| ||||| ||||||||| || ||||| ||||||||| |||||||||| | |||| |
|
|
| T |
27513957 |
atcatcttcaaaagctgttgacgtgccaaaaggatatctagcagtgtatgtaggagagaaaatgaagcggtttgtgatcccaatatcatacttgaaccaa |
27513858 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
| || || ||||| ||| ||| |||||||| ||| | | | |||||||||||| |||||||| |||| |||||||||| |
|
|
| T |
27513857 |
acctcgttccaagaattgttgaaccaagctgaagaacaatatgaatatgatcatccaatgggtggtctcactattccttgca |
27513776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 217 - 373
Target Start/End: Complemental strand, 27424670 - 27424514
Alignment:
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
||||| || ||||| ||||| ||||||||||| || || ||||| |||||| || ||||||||||| | |||||||||||||||||| ||||| | || |
|
|
| T |
27424670 |
ccaaaaggctatctcgcagtctatgttggagatcaaatgaggcggtttgtgattccagtatcatacttgaaccaaccttcatttcaagaattgctaaatc |
27424571 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
|| |||| ||||| | |||||||||||||| |||||||| | |||||||| |||| |
|
|
| T |
27424570 |
aatctgaagaagaatatggatatgatcatccaatgggtggtcttaccattccgtgca |
27424514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 371
Target Start/End: Original strand, 27501276 - 27501455
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| ||||||||| ||| || || |||||||||| ||| |||||||||||||||||| || || |||| ||||||||| |||||||||||| |||| |
|
|
| T |
27501276 |
atcatcttcaaaaggtgtcgaggttccaaagggatgtctagcagtatatgttggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaa |
27501375 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttg |
371 |
Q |
| |
|
|| | |||||||||||| ||| ||||| |||||| | || | ||| |||||||| | |||||| |||| |||||||| |
|
|
| T |
27501376 |
ccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcactattccttg |
27501455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 373
Target Start/End: Complemental strand, 27523584 - 27523403
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| |||||||||||||||| || |||||||| ||||| ||||| || || ||||||||| || ||||| |||||| || |||||||| || | |||| |
|
|
| T |
27523584 |
atcatcttcaaaagctgtggacgttccaaagggctatctagcagtgtacgtaggagagaaaatgaagcggtttgtgattcctgtatcatatttgaaccaa |
27523485 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
||||||| ||||| ||| |||| |||| |||||| | || | |||||| ||||| |||||||| | || |||||||||| |
|
|
| T |
27523484 |
acttcattccaagaattgttgagcgaagccgaggaacaatttgaatatgaccatccaatgggtggtctaactattccttgca |
27523403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 356
Target Start/End: Complemental strand, 27414463 - 27414321
Alignment:
| Q |
214 |
gtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctga |
313 |
Q |
| |
|
|||||||| || ||||||||||| || |||||||| ||| || |||| |||||| || ||||||||||| | |||||| ||||||||||| || || | |
|
|
| T |
27414463 |
gtgccaaaaggctatcttgcagtctacgttggagataaaatgagacggtttgtgattcctgtatcatacttgaaccaaccctcatttcaagaattactaa |
27414364 |
T |
|
| Q |
314 |
gtcaagctgaggaagagttcggatatgatcatcccatgggtgg |
356 |
Q |
| |
|
|||| | || ||||| || |||||||||||||| |||||||| |
|
|
| T |
27414363 |
atcaatcagaagaagaatttggatatgatcatccaatgggtgg |
27414321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 373
Target Start/End: Original strand, 27469419 - 27469600
Alignment:
| Q |
192 |
atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa |
291 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||||||| ||||| || || ||||||||| || ||||| ||||||||| ||||||| || | ||| |
|
|
| T |
27469419 |
atcatcttcaaaagctgtggacgttccaaagggatatctagcagtgtacgtaggagagaaaatgaagcggtttgtgatccctatatcatatttgaagcaa |
27469518 |
T |
|
| Q |
292 |
ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
| ||||| ||||| || |||| |||||||| ||| | || | |||||| ||||| |||||||| | || |||||||||| |
|
|
| T |
27469519 |
acatcattacaagaactgttgagccaagctgaagaacaatttgaatatgaacatccaatgggtggtctaactattccttgca |
27469600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27516965 - 27516917
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacacaaatcattcacat |
49 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27516965 |
tatatattcatggctgcaagcatttagcaccaacacaaatcattcacat |
27516917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 373
Target Start/End: Complemental strand, 27411564 - 27411456
Alignment:
| Q |
265 |
gtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcacca |
364 |
Q |
| |
|
||||| || ||||||||||| | |||||| || |||||||| || || | |||||| || ||||| || |||||||||||||| |||||||| |||| | |
|
|
| T |
27411564 |
gtgattccagtatcatacttgaaccaaccatcgtttcaagaattactaaatcaagcagaagaagaatttggatatgatcatcctatgggtggtctcacaa |
27411465 |
T |
|
| Q |
365 |
ttccttgca |
373 |
Q |
| |
|
||||||||| |
|
|
| T |
27411464 |
ttccttgca |
27411456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27466598 - 27466646
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacacaaatcattcacat |
49 |
Q |
| |
|
|||||||||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
27466598 |
tatatattcatggctgcaagcctttagcaccaacacaaatcattcacat |
27466646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 27498326 - 27498371
Alignment:
| Q |
126 |
aacacatacaaaaatgggttttcgtttccctggtatcatcagaagg |
171 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
27498326 |
aacacatacgaaaatgggttttcgtttaccaggtatcatcagaagg |
27498371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27473671 - 27473719
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacacaaatcattcacat |
49 |
Q |
| |
|
|||||||||||| |||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
27473671 |
tatatattcatggctgcaagcctttagcatcaacacaaatcattcacat |
27473719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27557269 - 27557329
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacac-aaatcattcacatcctaaagcatt |
60 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||| |
|
|
| T |
27557269 |
tatatattcatagttgcaagcatttaggaccaacacaaaatcattcacaacctaaagcatt |
27557329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 381
Target Start/End: Original strand, 27567287 - 27567403
Alignment:
| Q |
265 |
gtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcacca |
364 |
Q |
| |
|
||||| || ||||||||||| | |||||| || |||||||| || || | |||| | || ||||| || || ||||||||||| |||||||| |||| | |
|
|
| T |
27567287 |
gtgattccagtatcatacttgaaccaaccatcgtttcaagaattactaaatcaaacagaagaagaatttggttatgatcatccaatgggtggtctcacaa |
27567386 |
T |
|
| Q |
365 |
ttccttgcaccgaagat |
381 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
27567387 |
ttccttgcagcgaagat |
27567403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 372
Target Start/End: Original strand, 27571607 - 27571762
Alignment:
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
||||| || ||||| ||||| ||||||||||| | | || ||||| ||||| || |||||||| || ||||| || || |||||||| || || | || |
|
|
| T |
27571607 |
ccaaaaggctatctcgcagtctatgttggagatagaatgaggcggttcgtgattccagtatcatatttgagccagccatcgtttcaagaattactaaatc |
27571706 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgc |
372 |
Q |
| |
|
|| | || ||||| || |||||||||||||| |||||||| |||| ||||||||| |
|
|
| T |
27571707 |
aatcagaagaagaatttggatatgatcatccaatgggtggtctcacaattccttgc |
27571762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 27460540 - 27460618
Alignment:
| Q |
295 |
tcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
||||| ||||| |||||||| ||| ||||||| | || | |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
27460540 |
tcattccaagaattgctgagccaaagtgaggaacaatttgaatatgatcatccaatgggtggtctcaccattccttgca |
27460618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 27495620 - 27495686
Alignment:
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatat |
383 |
Q |
| |
|
||||||| |||||||| |||| | ||||||| |||||||| ||||||||||||||| |||||||| |
|
|
| T |
27495620 |
aagctgaagaagagtttggatttaatcatccaatgggtggtctcaccattccttgcagagaagatat |
27495686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 27473954 - 27474031
Alignment:
| Q |
295 |
tcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgc |
372 |
Q |
| |
|
||||| ||||| |||||||| ||| ||||||| | || | |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
27473954 |
tcattccaagaattgctgagccaaagtgaggaacaatttgaatatgatcatccaatgggtggtctcaccattccttgc |
27474031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 27501228 - 27501273
Alignment:
| Q |
126 |
aacacatacaaaaatgggttttcgtttccctggtatcatcagaagg |
171 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||| | |||||| |
|
|
| T |
27501228 |
aacacatacaagaatgggttttcgtttacctggtatcctaagaagg |
27501273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 27516838 - 27516793
Alignment:
| Q |
126 |
aacacatacaaaaatgggttttcgtttccctggtatcatcagaagg |
171 |
Q |
| |
|
||||||||||| ||||||||||||||| ||| ||||||||| |||| |
|
|
| T |
27516838 |
aacacatacaacaatgggttttcgtttacctagtatcatcaaaagg |
27516793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27431516 - 27431468
Alignment:
| Q |
1 |
tatatattcatgactgcaagcatttagaaccaacacaa-atcattcaca |
48 |
Q |
| |
|
|||||||||||| |||||||| |||| ||||||||||| |||||||||| |
|
|
| T |
27431516 |
tatatattcatggctgcaagcttttataaccaacacaatatcattcaca |
27431468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 27540063 - 27540147
Alignment:
| Q |
289 |
caaccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
||||||||||||||||||||||| || | || |||||||| || || || ||||||| |||||||| | ||||||||||||| |
|
|
| T |
27540063 |
caaccttcatttcaagacttgctaagcaaggcagaggaagaatttgggtaccatcatccaatgggtggactaaccattccttgca |
27540147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 373
Target Start/End: Complemental strand, 27556535 - 27556379
Alignment:
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
||||| || ||||| ||||| ||||||||||| ||| || ||| | |||||| ||| | |||| || | |||||||||||||||||| || || || |
|
|
| T |
27556535 |
ccaaaaggctatctcgcagtttatgttggagaaaaaatgaagcgatttgtgattcccatttcattattgaaccaaccttcatttcaagaattactacatc |
27556436 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
|||| || ||||| || |||||||||||| | |||||||| |||| ||||| |||| |
|
|
| T |
27556435 |
aagcagaagaagaatttggatatgatcattctatgggtggtctcacaattccatgca |
27556379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 373
Target Start/End: Complemental strand, 27559288 - 27559240
Alignment:
| Q |
325 |
gaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| |||| |||||||||| |
|
|
| T |
27559288 |
gaagagtttggatatgatcatccaatgggtggtctcacaattccttgca |
27559240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 211 - 395
Target Start/End: Complemental strand, 1756919 - 1756735
Alignment:
| Q |
211 |
gatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgc |
310 |
Q |
| |
|
||||| |||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||| |||||||||| | |||||| || |||||| ||||| |
|
|
| T |
1756919 |
gatgtaccaaagggctatcttgcagtgaatgttggagagaaacagaagcggtttgtgatcccaatatcatacttgaaccaaccatcgtttcaatacttgt |
1756820 |
T |
|
| Q |
311 |
tgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctttcaacatat |
395 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
1756819 |
tgagtcaagctgaagaagaatttggatatgatcaccccatgggtggcctcaccattccttgcaccgaagatgccttccaacatat |
1756735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 217 - 386
Target Start/End: Original strand, 1754672 - 1754841
Alignment:
| Q |
217 |
ccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagtc |
316 |
Q |
| |
|
|||||||| ||| ||||||| ||| ||||||||||||||| ||| |||||||||| |||||||||| | ||||| || |||||| |||| |||||| |
|
|
| T |
1754672 |
ccaaagggctatgttgcagtgtatattggagagaaacagaaacggcatgtgatcccaatatcatacttgaatcaaccatcgtttcaatccttgttgagtc |
1754771 |
T |
|
| Q |
317 |
aagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctt |
386 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||||||||| ||||||||| |||||| |||||| |||| |
|
|
| T |
1754772 |
aagctgcggaagagtttggatatgatcatccaatgggtggcctcaccattctttgcacagaagatgtctt |
1754841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 371
Target Start/End: Complemental strand, 1754398 - 1754243
Alignment:
| Q |
216 |
gccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgctgagt |
315 |
Q |
| |
|
|||||| |||||||| || |||||||||||||| || || ||||| ||||||||||||||||||||| | |||| | ||||||||| | ||||| | |
|
|
| T |
1754398 |
gccaaaaggatatctagctgtatatgttggagaagaaatgaagcggtttgtgatccccgtatcatacttgaaccaatcgtcatttcaaaaattgctaaac |
1754299 |
T |
|
| Q |
316 |
caagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttg |
371 |
Q |
| |
|
|| |||||||| |||| | |||||||||||| |||||||| |||| |||||||| |
|
|
| T |
1754298 |
aaatctgaggaacagtttgaatatgatcatccgatgggtggtctcactattccttg |
1754243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 380
Target Start/End: Complemental strand, 38025049 - 38024868
Alignment:
| Q |
199 |
tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat |
298 |
Q |
| |
|
|||||||||||| |||| |||||||| |||||||||||||||||||||||| || || ||||| ||| |||||| | |||||||| | |||| |||| | |
|
|
| T |
38025049 |
tcaaaagctgtgaatgtaccaaagggctatcttgcagtatatgttggagagcaaatgaagcggtttgttatccccatgtcatacttgaaccaagcttcct |
38024950 |
T |
|
| Q |
299 |
ttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaaga |
380 |
Q |
| |
|
||||| |||| |||||||||| |||||||| || ||||||||||| || ||||||||| |||| ||||||||||| ||||| |
|
|
| T |
38024949 |
ttcaaaacttattgagtcaagcagaggaagaatttggatatgatcacccaatgggtggcctcacgattccttgcacagaaga |
38024868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 380
Target Start/End: Complemental strand, 38031501 - 38031320
Alignment:
| Q |
199 |
tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat |
298 |
Q |
| |
|
|||||||||||| |||| |||||||| |||||||||||||||||||||||| || || ||||| ||| |||||| | |||||||| | |||| |||| | |
|
|
| T |
38031501 |
tcaaaagctgtgaatgtaccaaagggctatcttgcagtatatgttggagagcaaatgaagcggtttgttatccccatgtcatacttgaaccaagcttcct |
38031402 |
T |
|
| Q |
299 |
ttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaaga |
380 |
Q |
| |
|
||||| |||| |||||||||| |||||||| || ||||||||||| || ||||||||| |||| ||||||||||| ||||| |
|
|
| T |
38031401 |
ttcaaaacttattgagtcaagcagaggaagaatttggatatgatcacccaatgggtggcctcacgattccttgcacagaaga |
38031320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 212 - 386
Target Start/End: Original strand, 50909939 - 50910113
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||| || | ||||| ||| |||||| | |||||||| | |||| ||||||||||| ||||| | |
|
|
| T |
50909939 |
atgtgccaaagggttatcttgcagtgtatgttggagagcaaatgctgcggtttgttatccccatgtcatacttgaaccaagcttcatttcaaaacttgtt |
50910038 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatatctt |
386 |
Q |
| |
|
|| ||||| |||||||| || |||||||||||||| ||||||||| |||| ||||||||||| |||||| |||| |
|
|
| T |
50910039 |
gaatcaagtggaggaagaatttggatatgatcatccaatgggtggcctcacaattccttgcacagaagatgtctt |
50910113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 55084752 - 55084934
Alignment:
| Q |
199 |
tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat |
298 |
Q |
| |
|
|||||| ||||| |||||||||| || | ||||||||| ||||||||||||||| || ||||| ||||||||| | || ||||| | |||||| |||| |
|
|
| T |
55084752 |
tcaaaatctgtgaatgtgccaaaagggtgtcttgcagtgtatgttggagagaaaatgaagcggtttgtgatccctatgtcttacttgaaccaaccatcat |
55084851 |
T |
|
| Q |
299 |
ttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagat |
381 |
Q |
| |
|
||||||||||| |||||| || |||||||| || ||||| |||||||| ||||||||| |||| ||||||||||| |||||| |
|
|
| T |
55084852 |
ttcaagacttgttgagtcgggcggaggaagaatttggatacgatcatccaatgggtggcctcacaattccttgcacagaagat |
55084934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 373
Target Start/End: Complemental strand, 50904953 - 50904792
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| || || ||||| |||||||| | || ||||| | |||| ||||||||||||||||| | |
|
|
| T |
50904953 |
atgtgccaaagggatatcttgcagtgtacgttggagaagaaatgaagcggtttgtgatccatatgtcctacttgaaccaaacttcatttcaagacttgtt |
50904854 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgca |
373 |
Q |
| |
|
||||| ||| ||||| || ||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
50904853 |
gagtcgagcagaggatgaattcggatatgatcatccaatgggtggcctcaccattccttgca |
50904792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 199 - 379
Target Start/End: Complemental strand, 50912043 - 50911863
Alignment:
| Q |
199 |
tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat |
298 |
Q |
| |
|
||||||| |||| ||||||||||||| |||||||| |||||||||||||| || || |||| |||||||||| |||||||| | |||| |||||| |
|
|
| T |
50912043 |
tcaaaagttgtgaatgtgccaaagggctatcttgcggtatatgttggagacaagatgaaacggtttgtgatccccaagtcatacttgaaccaagcttcat |
50911944 |
T |
|
| Q |
299 |
ttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaag |
379 |
Q |
| |
|
||||| ||||| |||||||||| |||||||| || ||||||||||| || ||||||||| | || ||||||||||| |||| |
|
|
| T |
50911943 |
ttcaaaacttgttgagtcaagcagaggaagaatttggatatgatcacccaatgggtggcctaacaattccttgcacagaag |
50911863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 379
Target Start/End: Original strand, 38043882 - 38044049
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
||||||||||| | ||||||||||| || |||||||| || || ||||| ||||||||| | |||||||| | ||| |||| |||||||||||||| |
|
|
| T |
38043882 |
atgtgccaaagagctatcttgcagtgtactttggagaggaaatgaagcggtttgtgatccctatgtcatacttgaatcaaacttcgtttcaagacttgct |
38043981 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaag |
379 |
Q |
| |
|
||||||||| |||||||| || |||||||||||||| ||||| ||| |||| |||||||||||||||| |
|
|
| T |
38043982 |
gagtcaagcagaggaagaatttggatatgatcatccaatgggcggcctcacaattccttgcaccgaag |
38044049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 212 - 380
Target Start/End: Complemental strand, 38040242 - 38040074
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||||||| || || ||| | ||| |||||| |||||||| | |||| ||||||||||| || || | |
|
|
| T |
38040242 |
atgtgccaaagggctatcttgcagtgtacgttggagagcaaatgaagcgatttgttatccccacgtcatacttgaaccaagcttcatttcaaaacctgtt |
38040143 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaaga |
380 |
Q |
| |
|
||||||||| |||||||| ||||||||||| ||||| ||||| ||| |||| ||||||||||| ||||| |
|
|
| T |
38040142 |
gagtcaagccgaggaagaattcggatatgaccatccaatgggcggcctcacaattccttgcacagaaga |
38040074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 380
Target Start/End: Complemental strand, 38028927 - 38028759
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||||||| || || ||| | ||| |||||| |||||||| | |||| ||||||||||| || || | |
|
|
| T |
38028927 |
atgtgccaaagggctatcttgcagtgtacgttggagagcaaatgaagcgatttgttatccccacgtcatacttgaaccaagcttcatttcaaaacctgtt |
38028828 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaaga |
380 |
Q |
| |
|
||||||||| |||||||| || |||||||| ||||| ||||| ||| |||| ||||||||||| ||||| |
|
|
| T |
38028827 |
gagtcaagccgaggaagaatttggatatgaccatccaatgggcggcctcacaattccttgcacagaaga |
38028759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 374
Target Start/End: Complemental strand, 38036954 - 38036792
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||||||| || || |||| ||| ||||| | ||||||| | |||| ||||||||||| | ||| | |
|
|
| T |
38036954 |
atgtgccaaagggctatcttgcagtgtacgttggagagcaaatgaaacggtttgttgtccccatgccatacttgaaccaagcttcatttcaaaatttgtt |
38036855 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcac |
374 |
Q |
| |
|
||||||||| |||||||| ||||||||||| ||||| ||||| ||| |||| ||||||||||| |
|
|
| T |
38036854 |
gagtcaagccgaggaagaattcggatatgaccatccaatgggcggcctcacaattccttgcac |
38036792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 381
Target Start/End: Complemental strand, 38033953 - 38033767
Alignment:
| Q |
199 |
tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat |
298 |
Q |
| |
|
|||||||| || ||||||||||||| ||||||||||| || |||||||| || || ||||| ||| |||||| |||||||| | |||| |||||| |
|
|
| T |
38033953 |
tcaaaagcattgaatgtgccaaagggctatcttgcagtgtacattggagagcaaatgaagcggtttgttatccccacgtcatacttgaaccaagcttcat |
38033854 |
T |
|
| Q |
299 |
ttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcc----catgggtggcatcaccattccttgcaccgaagat |
381 |
Q |
| |
|
||||| ||||| |||||||||| |||||||| || |||||||| ||||| ||||| |||||||| ||||| ||||| |||||| |
|
|
| T |
38033853 |
ttcaaaacttgttgagtcaagccgaggaagaatttggatatgaccatccaattaatgggcggcatcacaattccctgcacagaagat |
38033767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 381
Target Start/End: Complemental strand, 48840873 - 48840704
Alignment:
| Q |
211 |
gatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgc |
310 |
Q |
| |
|
|||||||||||||||||||||||| | || || |||||| | || ||| | ||| |||||| | ||||||| | |||| | ||||||||||||||| |
|
|
| T |
48840873 |
gatgtgccaaagggatatcttgcattgtacgtcggagaggagatgaagcgatttgtaatccccatgccatacttgaaccaagcctcatttcaagacttgt |
48840774 |
T |
|
| Q |
311 |
tgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagat |
381 |
Q |
| |
|
||||| ||| ||| |||| || |||||||||||||| ||||||||| |||| ||||||||||| |||||| |
|
|
| T |
48840773 |
tgagt-aagtggagaaagaatttggatatgatcatccaatgggtggcctcacaattccttgcacagaagat |
48840704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 381
Target Start/End: Original strand, 3073548 - 3073717
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
|||||||||||||||||||||| || || ||||||||| || || ||||| ||||||||| |||||||| | |||| ||||||||||| ||||||| |
|
|
| T |
3073548 |
atgtgccaaagggatatcttgcggtgtacgttggagaggaaatgaagcggtttgtgatccctacgtcatacttgaaccaaacttcatttcaatacttgct |
3073647 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagat |
381 |
Q |
| |
|
||||| || |||||||| |||||||| |||||||| ||||||||| |||| ||||||||||| |||||| |
|
|
| T |
3073648 |
gagtcgggcagaggaagaattcggatacgatcatccaatgggtggcctcacaattccttgcacagaagat |
3073717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 69; Significance: 8e-31; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 199 - 383
Target Start/End: Complemental strand, 21607470 - 21607286
Alignment:
| Q |
199 |
tcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcat |
298 |
Q |
| |
|
||||||| |||| |||| ||||||||||||||||| ||||||||||||||| || || ||||| ||| |||||| | |||||||| | || | |||| | |
|
|
| T |
21607470 |
tcaaaagttgtgaatgtaccaaagggatatcttgcggtatatgttggagagcaaatgaagcggtttgttatccccatgtcatacttgaaccgagcttcct |
21607371 |
T |
|
| Q |
299 |
ttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagatat |
383 |
Q |
| |
|
||||| |||| |||||||||| |||||||| || ||||||||||| || ||||||||| |||| |||||||||| |||||||| |
|
|
| T |
21607370 |
ttcaaaacttattgagtcaagcagaggaagaatttggatatgatcacccaatgggtggcctcacggttccttgcacagaagatat |
21607286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 381
Target Start/End: Original strand, 21634603 - 21634691
Alignment:
| Q |
293 |
cttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaagat |
381 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||| || ||||||||||||| ||||| ||| |||| |||||||||||||||||| |
|
|
| T |
21634603 |
cttcgtttcaagacttgctgagtcaagcagaggaagaatttggatatgatcatcgaatgggcggcttcacaattccttgcaccgaagat |
21634691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 212 - 380
Target Start/End: Complemental strand, 21604915 - 21604747
Alignment:
| Q |
212 |
atgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaaccttcatttcaagacttgct |
311 |
Q |
| |
|
||||||||||||| ||||||||||| || || |||||| || || ||| | ||| |||||| |||||||| | |||| ||||||||||| || || | |
|
|
| T |
21604915 |
atgtgccaaagggctatcttgcagtgtaagtaggagagcaaatgaagcgatttgttatccccacgtcatacttgaaccaagcttcatttcaaaacatgtt |
21604816 |
T |
|
| Q |
312 |
gagtcaagctgaggaagagttcggatatgatcatcccatgggtggcatcaccattccttgcaccgaaga |
380 |
Q |
| |
|
|||||||| |||||||| || |||||||| ||||| ||||| ||| |||| ||||||||||| ||||| |
|
|
| T |
21604815 |
gagtcaagacgaggaagaattaggatatgaccatccaatgggcggcctcacaattccttgcacagaaga |
21604747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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