View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2371_high_49 (Length: 303)
Name: NF2371_high_49
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2371_high_49 |
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Alignment Details
Target: chr1 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 4943387 - 4943103
Alignment:
| Q |
1 |
atagaactgcattgtagcataagtttcaagacaaaacatagtaaggttgttctgaattatcctaaactgactttttgttacaaagggctctggtttggga |
100 |
Q |
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| T |
4943387 |
atagaactgcattgtagcataagtttcaagacaaaacatagtaaggttgttctgaattatcctaaactgactttttgttacaaagggctctggtttggga |
4943288 |
T |
|
| Q |
101 |
ggagaaacagaatctgcttactcaaaggatgctttgaatgaaagatgcgaaagccttgaaagggagttacaacttttgcagattgaaagagactctttgc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4943287 |
ggagaaacagaatctgcttactcaaaggatgctttgaatgaaagatgtgaaagccttgaaagggagttacaacttttgcagattgaaagagactctttgc |
4943188 |
T |
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| Q |
201 |
tagagaagttctctgaattgtctgataaacttgcaattgtgtcaagccaaaaggaaactgctttgaaagatttaaacattgaagt |
285 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
4943187 |
tagagaagttctctgaatcgtctgataaacttgcaattgtgtcaagccaaaaggaaaatgctttgaaagatttaaacattgaagt |
4943103 |
T |
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