View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2371_high_50 (Length: 302)

Name: NF2371_high_50
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2371_high_50
NF2371_high_50
[»] chr7 (13 HSPs)
chr7 (11-302)||(47457609-47457900)
chr7 (271-302)||(3562025-3562056)
chr7 (272-302)||(36548607-36548637)
chr7 (273-302)||(9331963-9331992)
chr7 (273-302)||(19868115-19868144)
chr7 (273-302)||(19889342-19889371)
chr7 (273-302)||(24250315-24250344)
chr7 (273-302)||(33342990-33343019)
chr7 (273-302)||(34270267-34270296)
chr7 (273-302)||(39757257-39757286)
chr7 (273-302)||(47120341-47120370)
chr7 (274-302)||(7170005-7170033)
chr7 (273-301)||(24857501-24857529)
[»] chr8 (13 HSPs)
chr8 (271-302)||(39701950-39701981)
chr8 (273-302)||(2161389-2161418)
chr8 (273-302)||(3306202-3306231)
chr8 (273-302)||(7140606-7140635)
chr8 (273-302)||(7750669-7750698)
chr8 (273-302)||(10129105-10129134)
chr8 (273-302)||(11117145-11117174)
chr8 (273-302)||(13496880-13496909)
chr8 (273-302)||(14816273-14816302)
chr8 (273-302)||(14829438-14829467)
chr8 (273-302)||(26682069-26682098)
chr8 (273-302)||(35678422-35678451)
chr8 (273-302)||(38527822-38527851)
[»] chr6 (11 HSPs)
chr6 (267-302)||(2087001-2087036)
chr6 (268-302)||(1814929-1814963)
chr6 (273-302)||(5363040-5363069)
chr6 (273-302)||(8977614-8977643)
chr6 (273-302)||(14228273-14228302)
chr6 (273-302)||(17552734-17552763)
chr6 (273-302)||(28943916-28943945)
chr6 (273-302)||(29863450-29863479)
chr6 (273-302)||(31791064-31791093)
chr6 (273-302)||(33017726-33017755)
chr6 (274-302)||(17596315-17596343)
[»] chr1 (9 HSPs)
chr1 (271-302)||(32716310-32716341)
chr1 (268-302)||(44918021-44918055)
chr1 (273-302)||(313751-313780)
chr1 (273-302)||(1502867-1502896)
chr1 (273-302)||(34050431-34050460)
chr1 (273-302)||(39150474-39150503)
chr1 (273-302)||(51382373-51382402)
chr1 (274-302)||(6754474-6754502)
chr1 (274-302)||(41624832-41624860)
[»] scaffold0727 (1 HSPs)
scaffold0727 (272-302)||(5691-5721)
[»] chr4 (6 HSPs)
chr4 (268-302)||(9759289-9759323)
chr4 (272-302)||(23553570-23553600)
chr4 (273-302)||(9971712-9971741)
chr4 (273-302)||(40049560-40049589)
chr4 (273-302)||(48910982-48911011)
chr4 (273-302)||(50352304-50352333)
[»] chr2 (14 HSPs)
chr2 (272-302)||(12919499-12919529)
chr2 (273-302)||(5583705-5583734)
chr2 (273-302)||(10690784-10690813)
chr2 (273-302)||(12016668-12016697)
chr2 (273-302)||(15411770-15411799)
chr2 (273-302)||(16126706-16126735)
chr2 (273-302)||(16919301-16919330)
chr2 (273-302)||(19228427-19228456)
chr2 (273-302)||(22705456-22705485)
chr2 (273-302)||(23932566-23932595)
chr2 (273-302)||(26230000-26230029)
chr2 (273-302)||(27665191-27665220)
chr2 (273-302)||(35729117-35729146)
chr2 (273-302)||(39904195-39904224)
[»] scaffold0061 (1 HSPs)
scaffold0061 (273-302)||(52926-52955)
[»] scaffold0017 (1 HSPs)
scaffold0017 (273-302)||(145679-145708)
[»] scaffold0009 (1 HSPs)
scaffold0009 (273-302)||(193380-193409)
[»] chr5 (10 HSPs)
chr5 (273-302)||(2795525-2795554)
chr5 (273-302)||(11636733-11636762)
chr5 (273-302)||(14466637-14466666)
chr5 (273-302)||(30328474-30328503)
chr5 (273-302)||(30839783-30839812)
chr5 (273-302)||(31366099-31366128)
chr5 (273-302)||(36597581-36597610)
chr5 (273-302)||(40512953-40512982)
chr5 (274-302)||(8103727-8103755)
chr5 (270-302)||(28378708-28378740)
[»] chr3 (10 HSPs)
chr3 (273-302)||(2571270-2571299)
chr3 (273-302)||(3863331-3863360)
chr3 (273-302)||(11610916-11610945)
chr3 (273-302)||(12515621-12515650)
chr3 (273-302)||(20938058-20938087)
chr3 (273-302)||(39365279-39365308)
chr3 (273-302)||(51339331-51339360)
chr3 (273-302)||(51618051-51618080)
chr3 (273-301)||(10307768-10307796)
chr3 (274-302)||(37444149-37444177)


Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 11 - 302
Target Start/End: Complemental strand, 47457900 - 47457609
Alignment:
Q  11 cacagatataaccaaaacatagacaacaaaatttgagcacaattgtgatctgtatatattaaagatcatcaatgcttcaacaaatgttctcaaacatttc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47457900 cacagatataaccaaaacatagacaacaaaatttgagcacaattgtgatctgtatatattaaagatcatcaatgcttcaacaaatgttctcaaacatttc 47457801  T
Q  111 accctctatgtgtaaaaggtgtaaaagctttctgagagcagaatcaacaaatcatgctatcttgctatcatcccaatatatatgcacggcaaatagcatc 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47457800 accctctatgtgtaaaaggtgtaaaagctttctgagagcagaatcaacaaatcatgctatcttgctatcatcccaatatatatgcacggcaaatagcatc 47457701  T
Q  211 atctatgtttcatcaaatgtcgtaaaacataccagttaccatctctataaaaattgtaaagatttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47457700 atctatgtttcatcaaatgtcgtaaaacataccagttaccatctctataaaaattgtaaggatttgtctaacatgtgcaatattgcacatgt 47457609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 302
Target Start/End: Complemental strand, 3562056 - 3562025
Alignment:
Q  271 gatttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||||    
T  3562056 gatttgtctaacatgtgcaatattgcacatgt 3562025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 36548637 - 36548607
Alignment:
Q  272 atttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||||    
T  36548637 atttgtctaacatgtgcaatattgcacatgt 36548607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 9331963 - 9331992
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  9331963 tttgtctaacatgtgcaatattgcacatgt 9331992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 19868115 - 19868144
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  19868115 tttgtctaacatgtgcaatattgcacatgt 19868144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 19889342 - 19889371
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  19889342 tttgtctaacatgtgcaatattgcacatgt 19889371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 24250315 - 24250344
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  24250315 tttgtctaacatgtgcaatattgcacatgt 24250344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 33342990 - 33343019
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  33342990 tttgtctaacatgtgcaatattgcacatgt 33343019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 34270267 - 34270296
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  34270267 tttgtctaacatgtgcaatattgcacatgt 34270296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 39757286 - 39757257
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  39757286 tttgtctaacatgtgcaatattgcacatgt 39757257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 47120370 - 47120341
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  47120370 tttgtctaacatgtgcaatattgcacatgt 47120341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 7170005 - 7170033
Alignment:
Q  274 ttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||    
T  7170005 ttgtctaacatgtgcaatattgcacatgt 7170033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 24857501 - 24857529
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatg 301  Q
    |||||||||||||||||||||||||||||    
T  24857501 tttgtctaacatgtgcaatattgcacatg 24857529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 302
Target Start/End: Complemental strand, 39701981 - 39701950
Alignment:
Q  271 gatttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||||    
T  39701981 gatttgtctaacatgtgcaatattgcacatgt 39701950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 2161389 - 2161418
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  2161389 tttgtctaacatgtgcaatattgcacatgt 2161418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 3306231 - 3306202
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  3306231 tttgtctaacatgtgcaatattgcacatgt 3306202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 7140635 - 7140606
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  7140635 tttgtctaacatgtgcaatattgcacatgt 7140606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 7750669 - 7750698
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  7750669 tttgtctaacatgtgcaatattgcacatgt 7750698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 10129105 - 10129134
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  10129105 tttgtctaacatgtgcaatattgcacatgt 10129134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 11117174 - 11117145
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  11117174 tttgtctaacatgtgcaatattgcacatgt 11117145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 13496909 - 13496880
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  13496909 tttgtctaacatgtgcaatattgcacatgt 13496880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 14816302 - 14816273
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  14816302 tttgtctaacatgtgcaatattgcacatgt 14816273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 14829438 - 14829467
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  14829438 tttgtctaacatgtgcaatattgcacatgt 14829467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 26682069 - 26682098
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  26682069 tttgtctaacatgtgcaatattgcacatgt 26682098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 35678451 - 35678422
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  35678451 tttgtctaacatgtgcaatattgcacatgt 35678422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 38527822 - 38527851
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  38527822 tttgtctaacatgtgcaatattgcacatgt 38527851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000007; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 2087036 - 2087001
Alignment:
Q  267 taaagatttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2087036 taaaggtttgtctaacatgtgcaatattgcacatgt 2087001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 1814963 - 1814929
Alignment:
Q  268 aaagatttgtctaacatgtgcaatattgcacatgt 302  Q
    |||| ||||||||||||||||||||||||||||||    
T  1814963 aaaggtttgtctaacatgtgcaatattgcacatgt 1814929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 5363069 - 5363040
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  5363069 tttgtctaacatgtgcaatattgcacatgt 5363040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 8977643 - 8977614
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  8977643 tttgtctaacatgtgcaatattgcacatgt 8977614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 14228302 - 14228273
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  14228302 tttgtctaacatgtgcaatattgcacatgt 14228273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 17552763 - 17552734
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  17552763 tttgtctaacatgtgcaatattgcacatgt 17552734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 28943945 - 28943916
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  28943945 tttgtctaacatgtgcaatattgcacatgt 28943916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 29863479 - 29863450
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  29863479 tttgtctaacatgtgcaatattgcacatgt 29863450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 31791093 - 31791064
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  31791093 tttgtctaacatgtgcaatattgcacatgt 31791064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 33017726 - 33017755
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  33017726 tttgtctaacatgtgcaatattgcacatgt 33017755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 17596315 - 17596343
Alignment:
Q  274 ttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||    
T  17596315 ttgtctaacatgtgcaatattgcacatgt 17596343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000007; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 302
Target Start/End: Complemental strand, 32716341 - 32716310
Alignment:
Q  271 gatttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||||    
T  32716341 gatttgtctaacatgtgcaatattgcacatgt 32716310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 44918021 - 44918055
Alignment:
Q  268 aaagatttgtctaacatgtgcaatattgcacatgt 302  Q
    |||| ||||||||||||||||||||||||||||||    
T  44918021 aaaggtttgtctaacatgtgcaatattgcacatgt 44918055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 313751 - 313780
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  313751 tttgtctaacatgtgcaatattgcacatgt 313780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 1502896 - 1502867
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  1502896 tttgtctaacatgtgcaatattgcacatgt 1502867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 34050460 - 34050431
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  34050460 tttgtctaacatgtgcaatattgcacatgt 34050431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 39150503 - 39150474
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  39150503 tttgtctaacatgtgcaatattgcacatgt 39150474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 51382373 - 51382402
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  51382373 tttgtctaacatgtgcaatattgcacatgt 51382402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 6754474 - 6754502
Alignment:
Q  274 ttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||    
T  6754474 ttgtctaacatgtgcaatattgcacatgt 6754502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 41624832 - 41624860
Alignment:
Q  274 ttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||    
T  41624832 ttgtctaacatgtgcaatattgcacatgt 41624860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Original strand, 5691 - 5721
Alignment:
Q  272 atttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||||    
T  5691 atttgtctaacatgtgcaatattgcacatgt 5721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 9759323 - 9759289
Alignment:
Q  268 aaagatttgtctaacatgtgcaatattgcacatgt 302  Q
    |||| ||||||||||||||||||||||||||||||    
T  9759323 aaaggtttgtctaacatgtgcaatattgcacatgt 9759289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Original strand, 23553570 - 23553600
Alignment:
Q  272 atttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||||    
T  23553570 atttgtctaacatgtgcaatattgcacatgt 23553600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 9971741 - 9971712
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  9971741 tttgtctaacatgtgcaatattgcacatgt 9971712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 40049560 - 40049589
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  40049560 tttgtctaacatgtgcaatattgcacatgt 40049589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 48911011 - 48910982
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  48911011 tttgtctaacatgtgcaatattgcacatgt 48910982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 50352304 - 50352333
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  50352304 tttgtctaacatgtgcaatattgcacatgt 50352333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 12919529 - 12919499
Alignment:
Q  272 atttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||||    
T  12919529 atttgtctaacatgtgcaatattgcacatgt 12919499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 5583734 - 5583705
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  5583734 tttgtctaacatgtgcaatattgcacatgt 5583705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 10690784 - 10690813
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  10690784 tttgtctaacatgtgcaatattgcacatgt 10690813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 12016668 - 12016697
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  12016668 tttgtctaacatgtgcaatattgcacatgt 12016697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 15411799 - 15411770
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  15411799 tttgtctaacatgtgcaatattgcacatgt 15411770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 16126735 - 16126706
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  16126735 tttgtctaacatgtgcaatattgcacatgt 16126706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 16919330 - 16919301
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  16919330 tttgtctaacatgtgcaatattgcacatgt 16919301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 19228427 - 19228456
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  19228427 tttgtctaacatgtgcaatattgcacatgt 19228456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 22705456 - 22705485
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  22705456 tttgtctaacatgtgcaatattgcacatgt 22705485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 23932566 - 23932595
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  23932566 tttgtctaacatgtgcaatattgcacatgt 23932595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 26230029 - 26230000
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  26230029 tttgtctaacatgtgcaatattgcacatgt 26230000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 27665220 - 27665191
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  27665220 tttgtctaacatgtgcaatattgcacatgt 27665191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 35729117 - 35729146
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  35729117 tttgtctaacatgtgcaatattgcacatgt 35729146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 39904224 - 39904195
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  39904224 tttgtctaacatgtgcaatattgcacatgt 39904195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 52955 - 52926
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  52955 tttgtctaacatgtgcaatattgcacatgt 52926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 145679 - 145708
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  145679 tttgtctaacatgtgcaatattgcacatgt 145708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 193409 - 193380
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  193409 tttgtctaacatgtgcaatattgcacatgt 193380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 2795525 - 2795554
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  2795525 tttgtctaacatgtgcaatattgcacatgt 2795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 11636733 - 11636762
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  11636733 tttgtctaacatgtgcaatattgcacatgt 11636762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 14466666 - 14466637
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  14466666 tttgtctaacatgtgcaatattgcacatgt 14466637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 30328503 - 30328474
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  30328503 tttgtctaacatgtgcaatattgcacatgt 30328474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 30839783 - 30839812
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  30839783 tttgtctaacatgtgcaatattgcacatgt 30839812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 31366128 - 31366099
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  31366128 tttgtctaacatgtgcaatattgcacatgt 31366099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 36597581 - 36597610
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  36597581 tttgtctaacatgtgcaatattgcacatgt 36597610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 40512953 - 40512982
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  40512953 tttgtctaacatgtgcaatattgcacatgt 40512982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 8103755 - 8103727
Alignment:
Q  274 ttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||    
T  8103755 ttgtctaacatgtgcaatattgcacatgt 8103727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 28378708 - 28378740
Alignment:
Q  270 agatttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||| |||||||||||||||||||||    
T  28378708 agatttgtctagcatgtgcaatattgcacatgt 28378740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.0000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 2571270 - 2571299
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  2571270 tttgtctaacatgtgcaatattgcacatgt 2571299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 3863331 - 3863360
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  3863331 tttgtctaacatgtgcaatattgcacatgt 3863360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 11610916 - 11610945
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  11610916 tttgtctaacatgtgcaatattgcacatgt 11610945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 12515650 - 12515621
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  12515650 tttgtctaacatgtgcaatattgcacatgt 12515621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 20938058 - 20938087
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  20938058 tttgtctaacatgtgcaatattgcacatgt 20938087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 39365308 - 39365279
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  39365308 tttgtctaacatgtgcaatattgcacatgt 39365279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 51339360 - 51339331
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  51339360 tttgtctaacatgtgcaatattgcacatgt 51339331  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 51618051 - 51618080
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatgt 302  Q
    ||||||||||||||||||||||||||||||    
T  51618051 tttgtctaacatgtgcaatattgcacatgt 51618080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 301
Target Start/End: Original strand, 10307768 - 10307796
Alignment:
Q  273 tttgtctaacatgtgcaatattgcacatg 301  Q
    |||||||||||||||||||||||||||||    
T  10307768 tttgtctaacatgtgcaatattgcacatg 10307796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 37444149 - 37444177
Alignment:
Q  274 ttgtctaacatgtgcaatattgcacatgt 302  Q
    |||||||||||||||||||||||||||||    
T  37444149 ttgtctaacatgtgcaatattgcacatgt 37444177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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