View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2371_high_77 (Length: 242)
Name: NF2371_high_77
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2371_high_77 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 31441596 - 31441810
Alignment:
| Q |
12 |
aagaatgttggcactcttcaaagctacaatgacaggacctaaacaggagagtattaggcagtcatggatttcaggttttggtcttttcagctcacaattt |
111 |
Q |
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| T |
31441596 |
aagaatgttggcactcttcaaagctacaatgacaggacctaaacaggagagtattaggcagtcatggatttcaggttttggtcttttcagctcacaattt |
31441695 |
T |
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| Q |
112 |
ttcaacacttcatcaacagcattggcatattggtatggtgggagtctcctaataaaaggccaaatagaaccgacggaactcttccaagcatttttaatat |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31441696 |
ttcaacacttcatcaacagcattggcatattggtatggtgggagtctcctaataaaaggccaaatagaaccgacggaactcttccaagcatttttaatat |
31441795 |
T |
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| Q |
212 |
tgctcttcactgcat |
226 |
Q |
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| T |
31441796 |
tgctcttcactgcat |
31441810 |
T |
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