View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2371_low_37 (Length: 376)

Name: NF2371_low_37
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2371_low_37
NF2371_low_37
[»] chr5 (40 HSPs)
chr5 (1-364)||(37804009-37804371)
chr5 (1-364)||(41875528-41875891)
chr5 (1-302)||(9776859-9777160)
chr5 (1-189)||(27868685-27868873)
chr5 (1-189)||(33472674-33472862)
chr5 (270-364)||(28369988-28370082)
chr5 (155-296)||(7786090-7786229)
chr5 (270-364)||(19512414-19512507)
chr5 (167-296)||(26707296-26707423)
chr5 (167-296)||(26977030-26977157)
chr5 (202-297)||(17021914-17022010)
chr5 (73-189)||(18419277-18419393)
chr5 (1-147)||(17011480-17011626)
chr5 (1-147)||(29448592-29448738)
chr5 (283-356)||(23560682-23560755)
chr5 (35-139)||(20313061-20313165)
chr5 (52-139)||(21503943-21504029)
chr5 (146-297)||(21553390-21553541)
chr5 (35-147)||(265824-265936)
chr5 (73-145)||(24594218-24594290)
chr5 (283-352)||(20844050-20844120)
chr5 (75-145)||(24668312-24668382)
chr5 (75-145)||(24738081-24738151)
chr5 (75-145)||(24750850-24750920)
chr5 (283-358)||(428204-428281)
chr5 (91-176)||(22412930-22413015)
chr5 (282-356)||(21830520-21830595)
chr5 (283-358)||(19363549-19363626)
chr5 (283-358)||(19509093-19509169)
chr5 (283-353)||(22508484-22508556)
chr5 (270-329)||(23111167-23111227)
chr5 (270-305)||(18407936-18407971)
chr5 (235-297)||(36461032-36461095)
chr5 (61-139)||(21398960-21399038)
chr5 (233-296)||(17813468-17813533)
chr5 (283-353)||(22501903-22501975)
chr5 (238-298)||(6766749-6766811)
chr5 (325-358)||(22231805-22231838)
chr5 (52-137)||(36508907-36508992)
chr5 (238-297)||(21980067-21980127)
[»] chr6 (44 HSPs)
chr6 (1-364)||(12942883-12943246)
chr6 (1-297)||(28288510-28288805)
chr6 (1-189)||(23956616-23956804)
chr6 (1-189)||(13765100-13765288)
chr6 (14-179)||(31021842-31022004)
chr6 (146-296)||(9184999-9185150)
chr6 (4-189)||(27557419-27557604)
chr6 (1-117)||(19825671-19825787)
chr6 (4-189)||(23415661-23415846)
chr6 (1-94)||(25807886-25807979)
chr6 (197-296)||(18138497-18138596)
chr6 (4-147)||(15891723-15891866)
chr6 (4-147)||(15900808-15900951)
chr6 (267-354)||(25397198-25397285)
chr6 (91-189)||(23225968-23226066)
chr6 (1-147)||(15173607-15173753)
chr6 (89-176)||(611641-611728)
chr6 (89-176)||(20556156-20556243)
chr6 (91-174)||(25619023-25619106)
chr6 (153-297)||(1588649-1588794)
chr6 (51-136)||(10446015-10446099)
chr6 (283-358)||(10582495-10582570)
chr6 (102-176)||(14978665-14978739)
chr6 (211-304)||(21470738-21470832)
chr6 (264-310)||(25348509-25348555)
chr6 (243-304)||(21477271-21477332)
chr6 (283-351)||(23232510-23232579)
chr6 (211-300)||(25773516-25773607)
chr6 (235-304)||(1341-1411)
chr6 (235-304)||(8300-8370)
chr6 (283-339)||(18787097-18787154)
chr6 (283-358)||(23020464-23020541)
chr6 (270-329)||(23839226-23839286)
chr6 (235-297)||(1254820-1254883)
chr6 (270-305)||(9187523-9187558)
chr6 (73-139)||(29045088-29045154)
chr6 (59-136)||(1818763-1818839)
chr6 (273-310)||(23057969-23058006)
chr6 (270-302)||(4477885-4477917)
chr6 (235-297)||(34296193-34296256)
chr6 (52-135)||(35057348-35057430)
chr6 (91-137)||(5833817-5833863)
chr6 (235-297)||(1639946-1640010)
chr6 (235-297)||(15816661-15816725)
[»] chr7 (75 HSPs)
chr7 (1-349)||(11303941-11304289)
chr7 (1-302)||(23664120-23664421)
chr7 (1-302)||(29797304-29797606)
chr7 (1-302)||(29801123-29801425)
chr7 (73-277)||(14105450-14105654)
chr7 (73-277)||(14415467-14415671)
chr7 (1-189)||(16107969-16108157)
chr7 (1-189)||(11661859-11662047)
chr7 (72-221)||(17505043-17505192)
chr7 (72-221)||(17548022-17548171)
chr7 (1-189)||(14188404-14188592)
chr7 (4-189)||(13917683-13917868)
chr7 (1-117)||(17070474-17070590)
chr7 (158-296)||(12207693-12207829)
chr7 (4-189)||(1856511-1856696)
chr7 (4-189)||(25926410-25926595)
chr7 (73-172)||(4325921-4326020)
chr7 (158-296)||(12201088-12201224)
chr7 (81-176)||(39431311-39431406)
chr7 (73-189)||(13648107-13648223)
chr7 (73-176)||(44190340-44190443)
chr7 (1-147)||(16550156-16550302)
chr7 (1-147)||(16615360-16615506)
chr7 (205-296)||(7530089-7530181)
chr7 (72-179)||(13256517-13256624)
chr7 (89-176)||(13864486-13864573)
chr7 (89-176)||(16462910-16462997)
chr7 (1-147)||(32160354-32160500)
chr7 (153-297)||(15727367-15727512)
chr7 (146-296)||(39994857-39995007)
chr7 (283-358)||(10520799-10520876)
chr7 (91-176)||(18455712-18455797)
chr7 (119-176)||(23557404-23557461)
chr7 (35-126)||(18570432-18570522)
chr7 (264-310)||(11311080-11311126)
chr7 (51-137)||(38295405-38295490)
chr7 (267-358)||(46625987-46626080)
chr7 (283-358)||(11854495-11854572)
chr7 (283-339)||(14168645-14168702)
chr7 (283-339)||(14172892-14172949)
chr7 (73-137)||(12754829-12754893)
chr7 (283-358)||(33405629-33405705)
chr7 (35-137)||(13315245-13315347)
chr7 (89-147)||(29052336-29052394)
chr7 (119-176)||(23556215-23556272)
chr7 (239-300)||(42042159-42042220)
chr7 (51-123)||(8930945-8931017)
chr7 (52-135)||(19194995-19195078)
chr7 (51-126)||(36300816-36300890)
chr7 (267-305)||(13664877-13664915)
chr7 (235-296)||(15214541-15214603)
chr7 (270-303)||(11382865-11382898)
chr7 (270-303)||(11389342-11389375)
chr7 (273-310)||(15168206-15168243)
chr7 (202-258)||(14249708-14249764)
chr7 (270-302)||(16009604-16009636)
chr7 (89-144)||(14274063-14274118)
chr7 (283-352)||(14580638-14580709)
chr7 (52-135)||(37539252-37539334)
chr7 (284-352)||(13318705-13318775)
chr7 (267-305)||(13679518-13679556)
chr7 (89-139)||(25942312-25942362)
chr7 (283-339)||(12555454-12555511)
chr7 (136-189)||(42374415-42374468)
chr7 (325-358)||(46347838-46347871)
chr7 (89-137)||(708685-708733)
chr7 (330-358)||(6412892-6412920)
chr7 (270-302)||(10895786-10895818)
chr7 (202-258)||(14265178-14265234)
chr7 (270-329)||(14423012-14423072)
chr7 (270-302)||(16677323-16677355)
chr7 (270-302)||(17651559-17651591)
chr7 (330-358)||(37243383-37243411)
chr7 (235-297)||(37726841-37726905)
chr7 (73-137)||(47975055-47975119)
[»] chr4 (44 HSPs)
chr4 (1-302)||(15534875-15535176)
chr4 (1-302)||(36038564-36038865)
chr4 (1-295)||(49546949-49547242)
chr4 (1-221)||(33849496-33849716)
chr4 (1-189)||(28385997-28386185)
chr4 (72-221)||(16277366-16277515)
chr4 (72-221)||(53386976-53387125)
chr4 (158-296)||(32490656-32490792)
chr4 (3-117)||(9638763-9638877)
chr4 (146-296)||(15415882-15416031)
chr4 (175-296)||(15318849-15318969)
chr4 (146-296)||(16370724-16370872)
chr4 (1-136)||(15008720-15008855)
chr4 (211-300)||(15076323-15076414)
chr4 (1-147)||(10694399-10694545)
chr4 (89-176)||(15344776-15344863)
chr4 (72-297)||(18230565-18230791)
chr4 (283-352)||(18165378-18165447)
chr4 (89-176)||(12611752-12611839)
chr4 (91-176)||(15447501-15447586)
chr4 (91-176)||(23802528-23802613)
chr4 (215-300)||(15069727-15069814)
chr4 (1-147)||(10908165-10908311)
chr4 (1-147)||(40620284-40620430)
chr4 (89-176)||(51463152-51463239)
chr4 (283-358)||(53904430-53904507)
chr4 (73-137)||(14549474-14549538)
chr4 (73-137)||(35660712-35660776)
chr4 (283-339)||(17177369-17177426)
chr4 (283-358)||(52501475-52501551)
chr4 (284-352)||(16485671-16485741)
chr4 (119-176)||(13043893-13043950)
chr4 (52-137)||(16296674-16296759)
chr4 (283-358)||(7360172-7360248)
chr4 (73-137)||(19434823-19434887)
chr4 (130-189)||(45005827-45005886)
chr4 (235-297)||(56114762-56114825)
chr4 (283-339)||(16228224-16228281)
chr4 (235-297)||(14035731-14035795)
chr4 (235-297)||(24046480-24046543)
chr4 (283-352)||(30240045-30240116)
chr4 (270-304)||(17143263-17143297)
chr4 (330-359)||(40909468-40909497)
chr4 (330-358)||(26076848-26076876)
[»] chr3 (67 HSPs)
chr3 (1-302)||(12305816-12306117)
chr3 (14-302)||(29544031-29544319)
chr3 (14-304)||(3803580-3803870)
chr3 (1-295)||(54521516-54521810)
chr3 (73-296)||(55291605-55291828)
chr3 (85-302)||(46722584-46722801)
chr3 (1-189)||(13436992-13437180)
chr3 (1-189)||(42281-42469)
chr3 (1-189)||(16324651-16324839)
chr3 (73-221)||(10555132-10555280)
chr3 (270-364)||(9534355-9534449)
chr3 (4-189)||(5224080-5224264)
chr3 (158-296)||(15238972-15239108)
chr3 (4-189)||(26054545-26054730)
chr3 (2-117)||(14641733-14641848)
chr3 (4-189)||(15465851-15466036)
chr3 (73-179)||(43549776-43549882)
chr3 (62-155)||(18890238-18890331)
chr3 (47-189)||(18893482-18893623)
chr3 (146-296)||(11325049-11325199)
chr3 (4-147)||(22652528-22652671)
chr3 (175-300)||(12854988-12855112)
chr3 (1-147)||(16979664-16979810)
chr3 (35-125)||(29907422-29907512)
chr3 (35-125)||(29948588-29948678)
chr3 (35-125)||(29997742-29997832)
chr3 (50-139)||(48043640-48043729)
chr3 (35-147)||(45803491-45803602)
chr3 (89-176)||(6820011-6820098)
chr3 (91-176)||(16643926-16644011)
chr3 (76-176)||(43929219-43929319)
chr3 (91-176)||(50243656-50243741)
chr3 (89-189)||(10833416-10833516)
chr3 (91-175)||(24152509-24152593)
chr3 (35-126)||(3527331-3527421)
chr3 (284-358)||(11889260-11889334)
chr3 (49-126)||(25201936-25202013)
chr3 (146-297)||(13837039-13837190)
chr3 (283-352)||(12153875-12153945)
chr3 (283-358)||(17497198-17497274)
chr3 (235-297)||(11913784-11913847)
chr3 (283-352)||(13692941-13693012)
chr3 (283-358)||(11643893-11643969)
chr3 (270-305)||(17240505-17240540)
chr3 (270-305)||(18929273-18929308)
chr3 (235-297)||(51602525-51602588)
chr3 (283-344)||(12275283-12275345)
chr3 (309-358)||(11938999-11939047)
chr3 (273-310)||(14762745-14762782)
chr3 (158-222)||(15233104-15233166)
chr3 (89-137)||(6805091-6805139)
chr3 (283-358)||(11304856-11304932)
chr3 (235-297)||(30123374-30123437)
chr3 (283-358)||(11964025-11964101)
chr3 (61-139)||(50350979-50351057)
chr3 (283-339)||(12203296-12203353)
chr3 (325-358)||(12364439-12364472)
chr3 (325-358)||(15519530-15519563)
chr3 (283-339)||(15934053-15934110)
chr3 (283-339)||(15954058-15954115)
chr3 (283-319)||(29551893-29551930)
chr3 (331-360)||(31689716-31689745)
chr3 (331-360)||(31944481-31944510)
chr3 (330-358)||(14293772-14293800)
chr3 (330-358)||(14299399-14299427)
chr3 (159-256)||(14647072-14647169)
chr3 (270-302)||(20247784-20247816)
[»] chr2 (40 HSPs)
chr2 (1-302)||(10683930-10684231)
chr2 (1-302)||(20261913-20262214)
chr2 (1-302)||(13100732-13101033)
chr2 (1-221)||(23338478-23338698)
chr2 (73-217)||(20590365-20590509)
chr2 (4-189)||(31345876-31346061)
chr2 (52-189)||(21072799-21072936)
chr2 (155-296)||(25652134-25652273)
chr2 (1-147)||(18358121-18358267)
chr2 (146-296)||(24161179-24161328)
chr2 (4-147)||(25183944-25184087)
chr2 (73-189)||(41301040-41301156)
chr2 (270-364)||(6483745-6483840)
chr2 (270-364)||(6487212-6487307)
chr2 (89-176)||(43707171-43707258)
chr2 (89-176)||(7187267-7187354)
chr2 (1-147)||(21081123-21081269)
chr2 (1-147)||(21915376-21915522)
chr2 (89-176)||(22173101-22173188)
chr2 (283-357)||(25174883-25174958)
chr2 (235-297)||(23086390-23086452)
chr2 (89-146)||(12626587-12626644)
chr2 (270-357)||(21908387-21908471)
chr2 (52-132)||(28345205-28345284)
chr2 (270-305)||(23265170-23265205)
chr2 (270-305)||(23280238-23280273)
chr2 (235-296)||(10039062-10039124)
chr2 (52-137)||(149670-149755)
chr2 (283-358)||(22012216-22012292)
chr2 (283-353)||(35243643-35243715)
chr2 (282-328)||(22860992-22861039)
chr2 (283-353)||(44090172-44090243)
chr2 (89-135)||(1383818-1383864)
chr2 (272-302)||(23101458-23101488)
chr2 (273-310)||(19661441-19661478)
chr2 (197-258)||(22795837-22795898)
chr2 (325-358)||(24659841-24659874)
chr2 (283-339)||(25106562-25106619)
chr2 (81-137)||(14183630-14183686)
chr2 (89-137)||(36734616-36734664)
[»] chr1 (44 HSPs)
chr1 (1-221)||(297109-297329)
chr1 (1-189)||(28313102-28313290)
chr1 (11-117)||(8276174-8276280)
chr1 (1-126)||(29763807-29763932)
chr1 (73-189)||(22130136-22130252)
chr1 (1-147)||(50001228-50001374)
chr1 (19-117)||(38056857-38056954)
chr1 (197-300)||(24476279-24476383)
chr1 (14-147)||(46197899-46198032)
chr1 (211-304)||(25091411-25091505)
chr1 (146-300)||(21526781-21526933)
chr1 (89-189)||(45574130-45574230)
chr1 (91-176)||(13880660-13880745)
chr1 (282-358)||(15315591-15315668)
chr1 (283-358)||(18419103-18419179)
chr1 (73-145)||(23194667-23194739)
chr1 (35-126)||(34392552-34392642)
chr1 (283-358)||(36615903-36615980)
chr1 (283-358)||(43089354-43089431)
chr1 (30-137)||(17901966-17902074)
chr1 (270-329)||(32651600-32651658)
chr1 (52-137)||(8306407-8306492)
chr1 (290-358)||(18025816-18025885)
chr1 (282-358)||(21665177-21665254)
chr1 (52-137)||(24723624-24723709)
chr1 (267-357)||(11158118-11158205)
chr1 (283-358)||(19860170-19860247)
chr1 (270-329)||(20436991-20437051)
chr1 (238-297)||(21180280-21180339)
chr1 (73-137)||(6833990-6834054)
chr1 (73-137)||(7052177-7052241)
chr1 (47-139)||(21188195-21188286)
chr1 (257-296)||(8686037-8686076)
chr1 (270-305)||(18712827-18712862)
chr1 (211-258)||(21986077-21986124)
chr1 (283-352)||(23713218-23713289)
chr1 (283-352)||(31926395-31926466)
chr1 (264-302)||(10811778-10811816)
chr1 (283-358)||(21963983-21964060)
chr1 (283-344)||(23634535-23634597)
chr1 (233-296)||(13227875-13227940)
chr1 (72-137)||(21239207-21239272)
chr1 (331-360)||(21736189-21736218)
chr1 (302-358)||(19854057-19854112)
[»] scaffold0422 (1 HSPs)
scaffold0422 (1-189)||(3717-3905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-189)||(7121-7309)
[»] chr8 (52 HSPs)
chr8 (1-189)||(8413859-8414047)
chr8 (6-189)||(19882706-19882889)
chr8 (1-189)||(11775476-11775655)
chr8 (4-179)||(14397031-14397205)
chr8 (1-94)||(17795986-17796079)
chr8 (153-296)||(22617542-22617684)
chr8 (1-147)||(25657668-25657814)
chr8 (4-147)||(16198591-16198734)
chr8 (89-189)||(25483552-25483652)
chr8 (91-176)||(23661140-23661225)
chr8 (92-176)||(20455831-20455915)
chr8 (1-147)||(23478834-23478980)
chr8 (91-176)||(17460331-17460416)
chr8 (1-147)||(19880582-19880721)
chr8 (95-176)||(20463042-20463123)
chr8 (283-358)||(20258085-20258161)
chr8 (283-358)||(21044715-21044791)
chr8 (146-297)||(20387386-20387536)
chr8 (92-171)||(20460809-20460888)
chr8 (270-360)||(18614300-18614388)
chr8 (283-358)||(19860534-19860611)
chr8 (35-136)||(22610431-22610531)
chr8 (283-358)||(35541975-35542051)
chr8 (92-171)||(20455095-20455174)
chr8 (264-310)||(39364942-39364988)
chr8 (235-302)||(364852-364920)
chr8 (89-147)||(22483620-22483678)
chr8 (1-136)||(26454465-26454593)
chr8 (270-329)||(23482020-23482080)
chr8 (52-136)||(23883973-23884056)
chr8 (283-352)||(21685163-21685234)
chr8 (283-352)||(21689512-21689583)
chr8 (235-298)||(43113015-43113078)
chr8 (235-296)||(20494351-20494413)
chr8 (233-296)||(21860535-21860600)
chr8 (283-358)||(36444837-36444913)
chr8 (233-304)||(38184689-38184762)
chr8 (267-311)||(21931722-21931766)
chr8 (235-297)||(22433615-22433678)
chr8 (235-297)||(42559455-42559518)
chr8 (283-358)||(19987270-19987346)
chr8 (283-338)||(20773176-20773233)
chr8 (283-338)||(20782970-20783027)
chr8 (283-344)||(21682790-21682852)
chr8 (246-304)||(28854816-28854874)
chr8 (264-297)||(14056564-14056597)
chr8 (197-258)||(21299350-21299411)
chr8 (264-297)||(25111998-25112031)
chr8 (330-358)||(21669832-21669860)
chr8 (283-353)||(27364275-27364347)
chr8 (270-310)||(29643373-29643413)
chr8 (52-136)||(36732649-36732733)
[»] scaffold0001 (3 HSPs)
scaffold0001 (2-189)||(169194-169381)
scaffold0001 (2-189)||(176547-176734)
scaffold0001 (283-346)||(179965-180030)
[»] scaffold0004 (3 HSPs)
scaffold0004 (159-296)||(385070-385208)
scaffold0004 (270-329)||(116924-116982)
scaffold0004 (30-137)||(66243-66349)
[»] scaffold0061 (2 HSPs)
scaffold0061 (1-147)||(14740-14886)
scaffold0061 (1-147)||(23798-23944)
[»] scaffold0200 (1 HSPs)
scaffold0200 (4-189)||(18350-18535)
[»] scaffold0070 (1 HSPs)
scaffold0070 (89-277)||(8932-9119)
[»] scaffold0154 (1 HSPs)
scaffold0154 (283-364)||(17521-17602)
[»] scaffold0053 (1 HSPs)
scaffold0053 (267-366)||(79023-79122)
[»] scaffold0016 (2 HSPs)
scaffold0016 (73-176)||(174232-174335)
scaffold0016 (153-296)||(182049-182192)
[»] scaffold0051 (1 HSPs)
scaffold0051 (4-189)||(31900-32084)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-117)||(18826-18942)
[»] scaffold0090 (1 HSPs)
scaffold0090 (164-296)||(31449-31580)
[»] scaffold0034 (1 HSPs)
scaffold0034 (6-147)||(29370-29511)
[»] scaffold1276 (1 HSPs)
scaffold1276 (72-297)||(964-1190)
[»] scaffold0058 (2 HSPs)
scaffold0058 (52-189)||(39923-40060)
scaffold0058 (1-57)||(6212-6268)
[»] scaffold0480 (1 HSPs)
scaffold0480 (197-300)||(1419-1523)
[»] scaffold0220 (2 HSPs)
scaffold0220 (1-117)||(13700-13816)
scaffold0220 (11-75)||(8887-8951)
[»] scaffold0462 (3 HSPs)
scaffold0462 (1-147)||(10975-11121)
scaffold0462 (73-135)||(1094-1156)
scaffold0462 (73-135)||(6600-6662)
[»] scaffold0293 (1 HSPs)
scaffold0293 (35-189)||(19410-19564)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-147)||(1689-1835)
scaffold0083 (104-176)||(42153-42225)
[»] scaffold0956 (1 HSPs)
scaffold0956 (90-176)||(2219-2305)
[»] scaffold0151 (1 HSPs)
scaffold0151 (52-178)||(9899-10025)
[»] scaffold0139 (2 HSPs)
scaffold0139 (267-360)||(14936-15027)
scaffold0139 (325-358)||(26935-26968)
[»] scaffold0014 (1 HSPs)
scaffold0014 (146-296)||(189630-189779)
[»] scaffold0730 (1 HSPs)
scaffold0730 (24-137)||(6668-6781)
[»] scaffold0334 (3 HSPs)
scaffold0334 (52-189)||(1929-2066)
scaffold0334 (283-358)||(9462-9537)
scaffold0334 (238-297)||(2109-2169)
[»] scaffold0148 (1 HSPs)
scaffold0148 (24-137)||(8616-8729)
[»] scaffold0205 (1 HSPs)
scaffold0205 (35-139)||(5778-5881)
[»] scaffold0117 (1 HSPs)
scaffold0117 (14-189)||(42438-42613)
[»] scaffold0046 (2 HSPs)
scaffold0046 (35-147)||(21931-22043)
scaffold0046 (211-256)||(71510-71555)
[»] scaffold0364 (2 HSPs)
scaffold0364 (89-176)||(8005-8092)
scaffold0364 (238-301)||(8155-8219)
[»] scaffold0094 (1 HSPs)
scaffold0094 (283-358)||(52290-52365)
[»] scaffold0057 (2 HSPs)
scaffold0057 (89-176)||(72278-72365)
scaffold0057 (14-147)||(70007-70140)
[»] scaffold0106 (3 HSPs)
scaffold0106 (81-175)||(21817-21911)
scaffold0106 (283-358)||(45847-45923)
scaffold0106 (283-358)||(50120-50196)
[»] scaffold0028 (1 HSPs)
scaffold0028 (267-360)||(69771-69863)
[»] scaffold0035 (4 HSPs)
scaffold0035 (35-138)||(39258-39361)
scaffold0035 (52-139)||(43949-44035)
scaffold0035 (283-358)||(1547-1622)
scaffold0035 (283-352)||(11427-11498)
[»] scaffold1439 (1 HSPs)
scaffold1439 (89-176)||(917-1004)
[»] scaffold0790 (1 HSPs)
scaffold0790 (211-297)||(5421-5508)
[»] scaffold0436 (1 HSPs)
scaffold0436 (1-147)||(8712-8858)
[»] scaffold0138 (2 HSPs)
scaffold0138 (22-147)||(20870-20995)
scaffold0138 (1-126)||(33865-33989)
[»] scaffold0877 (1 HSPs)
scaffold0877 (91-176)||(2151-2236)
[»] scaffold0290 (1 HSPs)
scaffold0290 (91-176)||(916-1001)
[»] scaffold0125 (1 HSPs)
scaffold0125 (91-176)||(1174-1259)
[»] scaffold0751 (1 HSPs)
scaffold0751 (283-358)||(1418-1494)
[»] scaffold0301 (1 HSPs)
scaffold0301 (283-358)||(4225-4300)
[»] scaffold0113 (2 HSPs)
scaffold0113 (283-358)||(26715-26790)
scaffold0113 (76-147)||(35319-35390)
[»] scaffold0394 (1 HSPs)
scaffold0394 (89-176)||(12891-12978)
[»] scaffold0031 (3 HSPs)
scaffold0031 (267-352)||(121928-122015)
scaffold0031 (267-352)||(132804-132891)
scaffold0031 (35-126)||(127520-127610)
[»] scaffold0037 (2 HSPs)
scaffold0037 (89-170)||(82839-82920)
scaffold0037 (284-358)||(45348-45421)
[»] scaffold0022 (2 HSPs)
scaffold0022 (284-358)||(37754-37830)
scaffold0022 (284-358)||(135815-135891)
[»] scaffold0077 (1 HSPs)
scaffold0077 (235-352)||(22048-22168)
[»] scaffold0156 (1 HSPs)
scaffold0156 (285-355)||(26603-26673)
[»] scaffold0026 (2 HSPs)
scaffold0026 (52-147)||(21925-22020)
scaffold0026 (198-258)||(36502-36562)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-126)||(4788-4913)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-126)||(4788-4913)
[»] scaffold0207 (1 HSPs)
scaffold0207 (161-300)||(9569-9710)
[»] scaffold0112 (1 HSPs)
scaffold0112 (91-176)||(23247-23332)
[»] scaffold0023 (1 HSPs)
scaffold0023 (119-176)||(163205-163262)
[»] scaffold0173 (1 HSPs)
scaffold0173 (284-339)||(2306-2362)
[»] scaffold0610 (1 HSPs)
scaffold0610 (283-360)||(6540-6615)
[»] scaffold0556 (1 HSPs)
scaffold0556 (283-339)||(4102-4159)
[»] scaffold1032 (1 HSPs)
scaffold1032 (283-358)||(2722-2797)
[»] scaffold0599 (1 HSPs)
scaffold0599 (235-297)||(1060-1123)
[»] scaffold0371 (1 HSPs)
scaffold0371 (238-297)||(8516-8575)
[»] scaffold0222 (1 HSPs)
scaffold0222 (270-305)||(16848-16883)
[»] scaffold0146 (1 HSPs)
scaffold0146 (270-305)||(13660-13695)
[»] scaffold0050 (1 HSPs)
scaffold0050 (283-352)||(13832-13903)
[»] scaffold0020 (1 HSPs)
scaffold0020 (270-305)||(101920-101955)
[»] scaffold0635 (1 HSPs)
scaffold0635 (235-296)||(7946-8008)
[»] scaffold0555 (1 HSPs)
scaffold0555 (89-147)||(8951-9009)
[»] scaffold0461 (1 HSPs)
scaffold0461 (270-304)||(1-35)
[»] scaffold0278 (1 HSPs)
scaffold0278 (131-189)||(23829-23887)
[»] scaffold0211 (2 HSPs)
scaffold0211 (283-317)||(10386-10420)
scaffold0211 (329-358)||(13699-13728)
[»] scaffold0947 (1 HSPs)
scaffold0947 (283-358)||(3289-3365)
[»] scaffold0180 (1 HSPs)
scaffold0180 (233-304)||(11615-11688)
[»] scaffold0114 (1 HSPs)
scaffold0114 (283-358)||(46938-47014)
[»] scaffold0071 (1 HSPs)
scaffold0071 (238-297)||(51991-52052)
[»] scaffold0011 (6 HSPs)
scaffold0011 (283-335)||(147969-148022)
scaffold0011 (283-335)||(155156-155209)
scaffold0011 (325-358)||(186913-186946)
scaffold0011 (325-358)||(196539-196572)
scaffold0011 (325-358)||(252890-252923)
scaffold0011 (325-358)||(259496-259529)
[»] scaffold0456 (2 HSPs)
scaffold0456 (270-356)||(8104-8188)
scaffold0456 (270-356)||(959-1043)
[»] scaffold0696 (1 HSPs)
scaffold0696 (257-296)||(3342-3381)
[»] scaffold0661 (1 HSPs)
scaffold0661 (283-352)||(3146-3217)
[»] scaffold0607 (1 HSPs)
scaffold0607 (239-296)||(3784-3843)
[»] scaffold0516 (1 HSPs)
scaffold0516 (283-352)||(7163-7234)
[»] scaffold0485 (1 HSPs)
scaffold0485 (235-297)||(3738-3798)
[»] scaffold0326 (2 HSPs)
scaffold0326 (283-352)||(4474-4544)
scaffold0326 (283-352)||(19656-19726)
[»] scaffold0261 (1 HSPs)
scaffold0261 (283-352)||(8360-8431)
[»] scaffold0213 (1 HSPs)
scaffold0213 (92-135)||(18958-19001)
[»] scaffold0091 (2 HSPs)
scaffold0091 (283-352)||(21856-21927)
scaffold0091 (283-352)||(26053-26124)
[»] scaffold0054 (1 HSPs)
scaffold0054 (283-352)||(59536-59607)
[»] scaffold0042 (1 HSPs)
scaffold0042 (153-291)||(67609-67749)
[»] scaffold0439 (1 HSPs)
scaffold0439 (89-147)||(12081-12139)
[»] scaffold0317 (1 HSPs)
scaffold0317 (267-305)||(1411-1449)
[»] scaffold0217 (1 HSPs)
scaffold0217 (29-139)||(28495-28604)
[»] scaffold0086 (1 HSPs)
scaffold0086 (81-135)||(35652-35706)
[»] scaffold0815 (1 HSPs)
scaffold0815 (267-300)||(1474-1507)
[»] scaffold0676 (1 HSPs)
scaffold0676 (52-137)||(2617-2702)
[»] scaffold0338 (1 HSPs)
scaffold0338 (235-298)||(2844-2909)
[»] scaffold0310 (1 HSPs)
scaffold0310 (283-335)||(17050-17103)
[»] scaffold0298 (1 HSPs)
scaffold0298 (233-300)||(587-656)
[»] scaffold0149 (2 HSPs)
scaffold0149 (283-339)||(14056-14113)
scaffold0149 (81-137)||(21372-21428)
[»] scaffold0096 (1 HSPs)
scaffold0096 (283-339)||(3888-3945)
[»] scaffold1461 (1 HSPs)
scaffold1461 (267-311)||(1471-1515)
[»] scaffold0483 (1 HSPs)
scaffold0483 (267-311)||(11007-11051)
[»] scaffold0413 (1 HSPs)
scaffold0413 (235-297)||(11646-11710)
[»] scaffold0074 (1 HSPs)
scaffold0074 (330-358)||(21232-21260)
[»] scaffold0064 (1 HSPs)
scaffold0064 (238-296)||(68978-69038)
[»] scaffold0049 (2 HSPs)
scaffold0049 (202-258)||(42111-42167)
scaffold0049 (202-258)||(52806-52862)
[»] scaffold0025 (1 HSPs)
scaffold0025 (330-358)||(72149-72177)


Alignment Details
Target: chr5 (Bit Score: 328; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 37804371 - 37804009
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37804371 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 37804272  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37804271 aggaaactcaacatatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaa 37804172  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37804171 cctaacccccaattcccaatttctactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcgcccttaccttaatt 37804072  T
Q  301 cagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  37804071 cagaagaaaaatgcacaacgatc-gattcccttggctctacttgctcttctctcccttgtcctt 37804009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 41875891 - 41875528
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||| | |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41875891 gtttactcgctgtggcgagttgcgacagacagctctacgggaacatgccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 41875792  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||| ||| |||| |||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41875791 aggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaa 41875692  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  41875691 cctaacccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcaatgagagagagtctcacccttaccttaatt 41875592  T
Q  301 cagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41875591 cagaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctctcccttgtcctt 41875528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 9776859 - 9777160
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9776859 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 9776958  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||| ||| ||||||||||||| || |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9776959 aggaaacttaacctatgtttattctacaatctgaacatcgattcttaacataattgtcatgatttctacacttttcaatccaagaatcatactccaaaaa 9777058  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9777059 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaatt 9777158  T
Q  301 ca 302  Q
    ||    
T  9777159 ca 9777160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 27868873 - 27868685
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27868873 gtttactcgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 27868774  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  27868773 aggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 27868685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 33472862 - 33472674
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  33472862 gtttactcgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaatcccaaatttgat 33472763  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  33472762 aggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 33472674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 28370082 - 28369988
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  28370082 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcagattcccttggctctacttgctcttctctcccttgtcctt 28369988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 155 - 296
Target Start/End: Original strand, 7786090 - 7786229
Alignment:
Q  155 tgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaat 254  Q
    |||||||| ||||||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||||||||| ||||  ||||||| |||||| |||||    
T  7786090 tgtcatggattctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaatttcaactggaaccctgctaaaccaaaattagaat 7786187  T
Q  255 tatataaccattatcattgagagatagtctcacccttacctt 296  Q
    | ||||||||||||||||||||| ||||||||||||||||||    
T  7786188 tgtataaccattatcattgagagttagtctcacccttacctt 7786229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 19512414 - 19512507
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  19512414 attgagagatagtctcacccttaccttaattcagaagaaaa-tgcacaacgatcagattcccttggctctacttgctcttctctcccttgtcctt 19512507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 26707296 - 26707423
Alignment:
Q  167 tacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccatt 266  Q
    |||||| || ||| ||| ||||||||||  |||||||||| |||||||||||||||||||||||||  ||||||| |||||||||| || ||||||||||    
T  26707296 tacactatttaattcaaaaatcatactc--aaaacctaactcccaattcccaatttcaactagaaccttgctaaaccaaaatcagagttgtataaccatt 26707393  T
Q  267 atcattgagagatagtctcacccttacctt 296  Q
    | ||||||||| ||||||||||||||||||    
T  26707394 accattgagagttagtctcacccttacctt 26707423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 26977030 - 26977157
Alignment:
Q  167 tacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccatt 266  Q
    |||||| || ||| ||| ||||||||||  |||||||||| |||||||||||||||||||||||||  ||||||| |||||||||| || ||||||||||    
T  26977030 tacactatttaattcaaaaatcatactc--aaaacctaactcccaattcccaatttcaactagaaccttgctaaaccaaaatcagagttgtataaccatt 26977127  T
Q  267 atcattgagagatagtctcacccttacctt 296  Q
    | ||||||||| ||||||||||||||||||    
T  26977128 accattgagagttagtctcacccttacctt 26977157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 297
Target Start/End: Complemental strand, 17022010 - 17021914
Alignment:
Q  202 ctaacccccaattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 297  Q
    |||| ||| |||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  17022010 ctaaacccaaattcccaattttaaccagaactatgctaaatccaaaatcagaattatacaaccattactattgagagatagtctcacccttacctta 17021914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 18419277 - 18419393
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| ||||||| | |||||||||||||||||| ||  |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||    
T  18419277 tttcatctacccaaatctcaaatttgataggaaacttaatctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacact 18419376  T
Q  173 tttcaatccaagaatca 189  Q
    ||||||| ||| |||||    
T  18419377 tttcaattcaaaaatca 18419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 17011480 - 17011626
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||| ||||||| |||||||| ||||  ||||||||||| |||||||||||  || ||| ||| | ||| |||| ||||||| |||||||||||    
T  17011480 gtttactcgcggtggcgacttgcgacggacaaatctacgggaacagaccagttttcactcctaaagccccaattt-catcaacccaaatcccaaatttga 17011578  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  17011579 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 17011626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29448592 - 29448738
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||| ||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| || |||| | |||||||||    
T  29448592 gtttactcgctgtagcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaactcaaatctcaaatttga 29448690  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  29448691 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 29448738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 23560755 - 23560682
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccc 356  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  23560755 ctcacccttacattaattcagaagaaaaatgcacaacgatcggattcgcttggctcaacttgctcttttctccc 23560682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 20313061 - 20313165
Alignment:
Q  35 ctacgggaacataccagtttt-cagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctg 133  Q
    ||||||||| | ||||||||| ||||||||||||||||||| || ||||||||| ||||||||  |||||||||||||  ||||||||||||||||| ||    
T  20313061 ctacgggaagaaaccagtttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaatctatgtttattctataacttg 20313159  T
Q  134 aacatc 139  Q
    ||||||    
T  20313160 aacatc 20313165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 21503943 - 21504029
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatc 139  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||  |||||||||||||| |||| |||||||| ||||||||||||    
T  21503943 ttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgattattctacaacctgaacatc 21504029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 297
Target Start/End: Complemental strand, 21553541 - 21553390
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatc-atactccaaaaacctaacccccaattcccaatttcaactagaa--ctatgctaaat 242  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||  ||  |||||||||  ||||||||||||||| ||| ||||  |  |||||||     
T  21553541 taacacaattgtcatggtttctacacttttcaattcaaaaatcaatgatc--aaaacctaa-acccaattcccaattt-aaccagaaccccttgctaaaa 21553446  T
Q  243 caaaatcagaattatata-accattatcattgagagatagtctcacccttacctta 297  Q
    |||||||||||||||||| || || | ||||||||| ||| |||||||||||||||    
T  21553445 caaaatcagaattatatagactataaccattgagagttagcctcacccttacctta 21553390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 265824 - 265936
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctga 134  Q
    ||||||||||| |||||||||||  | |||| ||    ||||||| | ||||| |||||||||||||||||||||||| ||||||||||||| | |||||    
T  265824 ctacgggaacagaccagttttcactcgaaaagccccaatttcatcaatccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctga 265923  T
Q  135 acatcgattctta 147  Q
    || || |||||||    
T  265924 acttcaattctta 265936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 24594290 - 24594218
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattct 145  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||    
T  24594290 tttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattct 24594218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 20844050 - 20844120
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctc 352  Q
    ||||| ||||||||||||||||||||||||||||| | | || | ||||||||||||||||||||||||||    
T  20844050 ctcactcttaccttaattcagaagaaaaatgcacatcaattcaggttcacttggctctacttgctcttctc 20844120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 24668382 - 24668312
Alignment:
Q  75 tcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattct 145  Q
    ||||| |||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||    
T  24668382 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattct 24668312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 24738151 - 24738081
Alignment:
Q  75 tcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattct 145  Q
    ||||| |||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||    
T  24738151 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattct 24738081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 24750920 - 24750850
Alignment:
Q  75 tcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattct 145  Q
    ||||| |||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||    
T  24750920 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattct 24750850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 428204 - 428281
Alignment:
Q  283 ctcacccttaccttaattcagaag-aaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| ||||||||||| | || | | ||||| ||||||||||||||||||||||||||    
T  428204 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacctggctctacttgctcttctctccctt 428281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 22412930 - 22413015
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||| ||||| ||| |||| |||||||| ||| | |||||| |||||||||||||||  |||||||||||||||||||    
T  22412930 caaatttgttagaaaacttaacctatgattattctacaacataaacatcaattcttaacacaattaccatggtttctacacttttc 22413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 21830520 - 21830595
Alignment:
Q  282 tctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccc 356  Q
    |||||||||||||||||||||||| || ||||||||| | ||  ||||| ||||||||||||||||||| ||||||    
T  21830520 tctcacccttaccttaattcagaaagacaaatgcacatcaatttgattctcttggctctacttgctcttttctccc 21830595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 19363549 - 19363626
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||| ||||||||||||||||| | ||||||||| | || ||||||| ||||| ||||||||||||||||||||||    
T  19363549 ctcaccgttaccttaattcagaagcacaaatgcacagcaattcggattcccttggttctacttgctcttctctccctt 19363626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 19509093 - 19509169
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| |||||||||||| | || | |||| || || || |||||||||||||||||||    
T  19509093 ctcacccttaccttaattcagaatgaaaaatgcacatcaattgaattctctgggttccacttgctcttctctccctt 19509169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 22508484 - 22508556
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcactt-ggctctacttgctcttctct 353  Q
    ||||||||||||||||||||||| |||||||||||||| |  |||||| ||| || |||||||||||||||||    
T  22508484 ctcacccttaccttaattcagaatgaaaaatgcacaacaaaaggattctcttgggttctacttgctcttctct 22508556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 329
Target Start/End: Complemental strand, 23111227 - 23111167
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattc 329  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| ||||||| |||||||||    
T  23111227 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattc 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Complemental strand, 18407971 - 18407936
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  18407971 attgagagatagtctcacccttaccttaattcagaa 18407936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 36461032 - 36461095
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| |||||||||||||||    
T  36461032 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctta 36461095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 21399038 - 21398960
Alignment:
Q  61 aaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatc 139  Q
    ||||||||||  | ||||| ||||||| ||||||||| |||| ||||||  | ||||||||||||| ||||||||||||    
T  21399038 aaaaacccaaaatctcatctacccaaatcccaaattttatagaaaactcttcctatgtttattctacaacctgaacatc 21398960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 17813468 - 17813533
Alignment:
Q  233 tatgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctt 296  Q
    |||| |||||||||||||||| |||||||| | || ||||||||||| ||||||||||||||||||    
T  17813468 tatgttaaatcaaaatcagaagttatataatctataatcattgagagttagtctcacccttacctt 17813533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 22501903 - 22501975
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcactt-ggctctacttgctcttctct 353  Q
    ||||||||||||||||||||||| |||||||||||| | |  |||||| ||| || |||||||||||||||||    
T  22501903 ctcacccttaccttaattcagaatgaaaaatgcacagcaaaaggattctcttgggttctacttgctcttctct 22501975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 6766749 - 6766811
Alignment:
Q  238 taaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttaccttaa 298  Q
    ||||||||||| |||| |||||||| | || ||||||||||| ||||||||||||||||||||    
T  6766749 taaatcaaaataagaagttatataatctataatcattgagagttagtctcacccttaccttaa 6766811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 22231838 - 22231805
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  22231838 gattctcttggctctacttgctcttctctccctt 22231805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 36508992 - 36508907
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||| ||||||| || |  ||| ||| ||| ||| |||||||||||||||||||| ||| |||| |||||||| ||||| ||||    
T  36508992 ttttcacccaaaaaacccaaatttgatctacctaaatcccaaatttgataggaaacttaacctatgattattctacaacctaaaca 36508907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 21980127 - 21980067
Alignment:
Q  238 taaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctta 297  Q
    |||||||||||||||||||||  ||| || ||||||||||| | | |||||||||||||||    
T  21980127 taaatcaaaatcagaattatacaaactataatcattgagagttggcctcacccttacctta 21980067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 324; Significance: 0; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 12942883 - 12943246
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12942883 gtttactcactgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 12942982  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||| ||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  12942983 aggaaactcaacctatatttattctacaatctgaacatcgattcttaacacaattgccatcgtttctacacttttcaatccaagaatcatactccaaaaa 12943082  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12943083 cctaacccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 12943182  T
Q  301 cagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12943183 cagaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctctcccttgtcctt 12943246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 28288805 - 28288510
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28288805 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 28288706  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  28288705 aggaaactcaacctatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactcc-aaaa 28288607  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28288606 cctaacccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 28288510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 23956616 - 23956804
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23956616 gtttactcgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 23956715  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  23956716 aggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23956804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 13765100 - 13765288
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  | ||| ||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  13765100 gtttactcgctgtggcgagttgcgacagaaaactctatgggaacagaccagtttccagccaaaaacctaatttttcatccacccaaaccccaaatttgat 13765199  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  13765200 aggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 13765288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 31022004 - 31021842
Alignment:
Q  14 ggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaaca 113  Q
    |||||||||||||  ||||| ||||||||||| |||||    ||||||||||| ||| |||||||| |||||||||||||||||||||||||||| |||     
T  31022004 ggcgagttgcgacagacaactctacgggaacagaccagc---cagccaaaaactcaaattttcatctacccaaaccccaaatttgataggaaacttaacc 31021908  T
Q  114 tatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaat 179  Q
    |||| |||||||| |||||||||||| |||||||||||||||   || ||||||||||||||||||    
T  31021907 tatgattattctacaacctgaacatcaattcttaacacaatttcgatagtttctacacttttcaat 31021842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 146 - 296
Target Start/End: Complemental strand, 9185150 - 9184999
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattccc-aatttcaactagaactatgctaaatca 244  Q
    |||||| | |||||||| |||||||||||| ||| ||| ||||||||||||||| ||||||| | |||| || |||||||||||||||  ||||||| ||    
T  9185150 taacactaatgtcatggattctacactttttaattcaaaaatcatactccaaaa-cctaacctctaatttcctaatttcaactagaaccttgctaaacca 9185052  T
Q  245 aaatcagaa-ttatataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9185051 aaatcagaaattatataaccattatcattgagagatagtctcacccttacctt 9184999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 27557419 - 27557604
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||| ||||||  |||||| ||| |  ||||||| || |||| ||||||||||||||    
T  27557419 tactcgctgtggcgagttgcgacggacaaatctacgggaacagaccaattttcactccaaaagcccca-atttcatcgactcaaatcccaaatttgatag 27557517  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
     ||||||||| ||||||||||||| ||||||||| || ||| |||||||||||    |||||||||||||||||||| ||| |||||    
T  27557518 aaaactcaacctatgtttattctacaacctgaacttcaattattaacacaatttcgttggtttctacacttttcaattcaaaaatca 27557604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19825787 - 19825671
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||| |||||||||||||||||| |  |||||  |||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  19825787 gtttaatcgctgtggcgagttgcggcagacaactatacgggaacagaccagttttcagccaaaaacccaatttttcatccacctaaactccaaatttgat 19825688  T
Q  101 aggaaactcaacatatg 117  Q
    |||||||| ||| ||||    
T  19825687 aggaaacttaacctatg 19825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 23415661 - 23415846
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||| |||||| |||||||| | ||  ||||||||||| ||||||| |||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  23415661 tactcgctatggcgaattgcgacggaaaaatctacgggaacagaccagttgtcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 23415759  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||||||||||   ||||||||||| ||||||||| ||| |||||    
T  23415760 gaaactcaacctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacgcttttcaattcaaaaatca 23415846  T

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Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25807886 - 25807979
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaa 94  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  25807886 gtttactcgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagctaaaaacccaatttttcatccacccaaaccccaaa 25807979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 197 - 296
Target Start/End: Original strand, 18138497 - 18138596
Alignment:
Q  197 aaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaa-tcagaattatataaccattatcattgagagatagtctcacccttacct 295  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18138497 aaaacctaacccc-aattctcaatttcaactggaactatgctaaaccaaaaatcagaattatataaccattatcattgagagatagtctcacctttacct 18138595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 15891866 - 15891723
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  15891866 tactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 15891768  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||| |||||||||| || | ||||||| || |||||||    
T  15891767 gaaactcaacctatgtttattttacagcctgaacttcaattctta 15891723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 15900951 - 15900808
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  15900951 tactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 15900853  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||| |||||||||| || | ||||||| || |||||||    
T  15900852 gaaactcaacctatgtttattttacagcctgaacttcaattctta 15900808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 25397198 - 25397285
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctc 354  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||    
T  25397198 atcatcgagagttagcctcacccttaccttaattcagaagaaaaacgcacaacgatcggattcttttagctctacttgctcttctctc 25397285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 23226066 - 23225968
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  23226066 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23225968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 15173753 - 15173607
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||| || ||||||||  |||||| ||| |  ||||||| | ||||| |||||||||||    
T  15173753 gtttactcgctgtggcgagttgcgacggacaaatctacgggaacagactagttttcactccaaaagcccca-atttcatcaatccaaatcccaaatttga 15173655  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||| ||| |  |||||| || |||||||    
T  15173654 taggaaactcaacctatgtttatcctacaggctgaacttcaattctta 15173607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 611641 - 611728
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||||||||| ||| |||| ||||||||  ||||||||||  |||| |||||||||||||||||||||||||||||||    
T  611641 cccaaatttgttaggaaacttaacctatgattattctaccacctgaacattaattcctaacacaattgtcatggtttctacacttttc 611728  T

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Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 20556243 - 20556156
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||| ||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  20556243 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20556156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 25619106 - 25619023
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttt 174  Q
    |||||||| ||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||    
T  25619106 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttt 25619023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 297
Target Start/End: Original strand, 1588649 - 1588794
Alignment:
Q  153 attgtcatggtttctacacttttcaatccaagaatc-atactccaaaaacctaacccccaattcccaatttcaactagaa--ctatgctaaatcaaaatc 249  Q
    ||||||||||||||||||||||||||| ||| |||| ||| ||  ||||||||| || ||| |||||| || ||||||||  || || |||||||| |||    
T  1588649 attgtcatggtttctacacttttcaattcaaaaatctataatc--aaaacctaaacctcaaatcccaaatt-aactagaaccctttgttaaatcaacatc 1588745  T
Q  250 agaattatata-accattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||| || || ||||||||||| |||||||||||||||||||    
T  1588746 agaattatatagactataatcattgagagttagtctcacccttacctta 1588794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 10446015 - 10446099
Alignment:
Q  51 gttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaac 136  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||  | |||||||||||| |||||||||||||||| ||||||    
T  10446015 gttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaaaaggaaactcaacctatgtttattctataatctgaac 10446099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 10582570 - 10582495
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||||| ||||||||||||||    
T  10582570 ctcacccttaccttaattcagaagaaaaatgcacaacaattcgggttc-cttggctctactttctcttctctccctt 10582495  T

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Target: chr6; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 14978739 - 14978665
Alignment:
Q  102 ggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    ||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  14978739 ggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 14978665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 21470738 - 21470832
Alignment:
Q  211 aattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcaga 304  Q
    ||||||||||||| || |||||||||||||| | ||||||| |||||||||| |||||   |||| ||||||||||||| |||||||||||||||    
T  21470738 aattcccaatttctaccagaactatgctaaacccaaaatcaaaattatataatcattaatgttgaaagatagtctcaccattaccttaattcaga 21470832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 25348509 - 25348555
Alignment:
Q  264 attatcattgagagatagtctcacccttaccttaattcagaagaaaa 310  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  25348509 attattattgagagatagtctcacccttaccttaattcagaagaaaa 25348555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 21477271 - 21477332
Alignment:
Q  243 caaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcaga 304  Q
    ||||||||||||||||||| |||||   |||| |||||||||||||||||||||||||||||    
T  21477271 caaaatcagaattatataatcattaatgttgaaagatagtctcacccttaccttaattcaga 21477332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 351
Target Start/End: Complemental strand, 23232579 - 23232510
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttct 351  Q
    ||||||||||||||||||||||| || ||||||||||| ||  ||||| |||||||||||||||||||||    
T  23232579 ctcacccttaccttaattcagaaagacaaatgcacaacaatttgattctcttggctctacttgctcttct 23232510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 25773516 - 25773607
Alignment:
Q  211 aattcccaatttcaactagaactatgctaaatc--aaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||| || |||||||||||||| |  ||||||||| |||||||| |||||   |||| |||||||||||| ||||||||||||    
T  25773516 aattcccaatttctaccagaactatgctaaacccaaaaatcagacttatataatcattaatgttgaaagatagtctcactcttaccttaatt 25773607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 1341 - 1411
Alignment:
Q  235 tgctaaatcaaaatcagaattatataacc-attatcattgagagatagtctcacccttaccttaattcaga 304  Q
    |||||||||||||||||||||||| || | || ||||||||||| ||  ||||||||||||||||||||||    
T  1341 tgctaaatcaaaatcagaattatacaaactataatcattgagagttaacctcacccttaccttaattcaga 1411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 8300 - 8370
Alignment:
Q  235 tgctaaatcaaaatcagaattatataacc-attatcattgagagatagtctcacccttaccttaattcaga 304  Q
    |||||||||||||||||||||||| || | || ||||||||||| ||  ||||||||||||||||||||||    
T  8300 tgctaaatcaaaatcagaattatacaaactataatcattgagagttaacctcacccttaccttaattcaga 8370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 18787097 - 18787154
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctct 339  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||| |||||||||    
T  18787097 ctcacccttaccttaattcagaaggaaaaatgcacaacaattggattctcttggctct 18787154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 23020541 - 23020464
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| | |||||||||   || ||||||| ||||| ||||||||||||||||||||||    
T  23020541 ctcacccttaccttaattcagaagcacaaatgcacaggaattcggattcccttggttctacttgctcttctctccctt 23020464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 23839226 - 23839286
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattc 329  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| ||||||| |||||||||    
T  23839226 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattc 23839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 1254820 - 1254883
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| |||||||||||||||    
T  1254820 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctta 1254883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 9187523 - 9187558
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  9187523 attgagagatagtctcacccttaccttaattcagaa 9187558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 29045088 - 29045154
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatc 139  Q
    ||||||| || |||| |||||||||||||| |||||| || |||| |||||||| ||||||||||||    
T  29045088 tttcatcaactcaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacatc 29045154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 1818763 - 1818839
Alignment:
Q  59 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaac 136  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||| ||||||||||||| || ||||||    
T  1818763 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 1818839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 23057969 - 23058006
Alignment:
Q  273 gagagatagtctcacccttaccttaattcagaagaaaa 310  Q
    |||||||||||||||||||||||||||| |||||||||    
T  23057969 gagagatagtctcacccttaccttaatttagaagaaaa 23058006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 4477885 - 4477917
Alignment:
Q  270 attgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||||||||||||    
T  4477885 attgagagatagtctcacccttaccttaattca 4477917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 34296256 - 34296193
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||  |||||||||||||||    
T  34296256 tgctaaatcaaaatcagaattatacaaactataatcattgagagttaacctcacccttacctta 34296193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 35057348 - 35057430
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaa 135  Q
    |||||| ||||||| |||| ||| |||| ||||||| |||||||||||||| ||||| ||| || | |||||||| ||||||||    
T  35057348 ttttcacccaaaaatccaaattt-catctacccaaatcccaaatttgatagaaaacttaacttaagattattctacaacctgaa 35057430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 5833863 - 5833817
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||||||||||| ||| |||||||| |||||||| ||||||||||    
T  5833863 caaatttgataggacacttaacatatgattattctacaacctgaaca 5833817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 1639946 - 1640010
Alignment:
Q  235 tgctaaatcaaaatcagaatt-atataacc-attatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||| ||||||||| |||||| | || ||||||||||| ||| |||||||||||||||    
T  1639946 tgctaaatcaatatcagaatttatataaactataatcattgagagttagcctcacccttacctta 1640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 15816725 - 15816661
Alignment:
Q  235 tgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||| ||||||| |||||||| | |  ||||||||||| |||||||||||||||||||    
T  15816725 tgctaaatcaacatcagaagttatataatcgaaaatcattgagagttagtctcacccttacctta 15816661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 11303941 - 11304289
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11303941 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaacaccaaatttgat 11304040  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11304041 aggaaactcaacctatgtttattctacaatctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaa 11304140  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11304141 cctaacccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 11304240  T
Q  301 cagaagaaaaatgcacaacgatcggattcacttggctctacttgctctt 349  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11304241 cagaagaaaaatgcacaacgatcggattcccttggctctacttgctctt 11304289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 23664421 - 23664120
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664421 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 23664322  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664321 aggaaactcaacctatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 23664222  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23664221 cctaacccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaatt 23664122  T
Q  301 ca 302  Q
    ||    
T  23664121 ca 23664120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 29797304 - 29797606
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29797304 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 29797403  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactcc-aaaa 199  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  29797404 aggaaactcaacatatgtttattctacaatctgaacatcgattcctaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaa 29797503  T
Q  200 acctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaat 299  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29797504 acctaacccccaattcccaatttcagctagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaat 29797603  T
Q  300 tca 302  Q
    |||    
T  29797604 tca 29797606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 29801123 - 29801425
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29801123 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 29801222  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactcc-aaaa 199  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  29801223 aggaaactcaacatatgtttattctacaatctgaacatcgattcctaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaa 29801322  T
Q  200 acctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaat 299  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29801323 acctaacccccaattcccaatttcagctagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaat 29801422  T
Q  300 tca 302  Q
    |||    
T  29801423 tca 29801425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 73 - 277
Target Start/End: Complemental strand, 14105654 - 14105450
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||| ||||||||| |||||    
T  14105654 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttccacact 14105555  T
Q  173 tttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcatt 272  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  14105554 tttcaatccaagaatcatactcccaaaacctaacccccaattcccaatttcagctagaactattctaaaccaaaattagaattatataaccattatcatt 14105455  T
Q  273 gagag 277  Q
    |||||    
T  14105454 gagag 14105450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 73 - 277
Target Start/End: Complemental strand, 14415671 - 14415467
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||| ||||||||| |||||    
T  14415671 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttccacact 14415572  T
Q  173 tttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcatt 272  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  14415571 tttcaatccaagaatcatactcccaaaacctaacccccaattcccaatttcagctagaactattctaaaccaaaattagaattatataaccattatcatt 14415472  T
Q  273 gagag 277  Q
    |||||    
T  14415471 gagag 14415467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 16108157 - 16107969
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16108157 gtttactcgctgtggcgagttgcgacgaacaactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 16108058  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  16108057 aggaaactcaacctatgtttattctacaatctgaacatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 16107969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 11661859 - 11662047
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  11661859 gtttactcgctgtggcgagttgcgacagacaactctacgggaacagaccagtttctagccaaaaacccaatttttcatccacccaaaccccaaatttgat 11661958  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||  ||| |||| |||||||||||| |||||||||||||||   ||||||| ||||||||||||| ||| |||||    
T  11661959 aggaaacttaacctataattagtctacaacctgaacatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 11662047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 17505192 - 17505043
Alignment:
Q  72 ttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    |||||||| |||||||| ||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||||||||||||| ||||||||||||||    
T  17505192 ttttcatctacccaaactccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacac 17505093  T
Q  172 ttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatt 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17505092 ttttcaatccaagaatcatactcccaaaacctaacccccaattcccaatt 17505043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 17548022 - 17548171
Alignment:
Q  72 ttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    |||||||| |||||||| ||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||||||||||||| ||||||||||||||    
T  17548022 ttttcatctacccaaactccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacac 17548121  T
Q  172 ttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatt 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17548122 ttttcaatccaagaatcatactcccaaaacctaacccccaattcccaatt 17548171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 14188592 - 14188404
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||| ||||||||||||||||||||    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14188592 gtttaatcgctgtggcgagttgcgacaggaaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 14188493  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||||| ||| |||||||| |||||||||||||||   ||||||||||||| ||||||| ||| |||||    
T  14188492 aggaaacttaacctatgattattctacaacttgaacatcaattcttaacacaatttcgatggtttctacacatttcaattcaaaaatca 14188404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 13917868 - 13917683
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||| | ||||||||||||||    
T  13917868 tactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccagatcccaaatttgatag 13917770  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  13917769 gaaactcaacctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 13917683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17070590 - 17070474
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    |||||||||| |||||||||||||||  ||||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17070590 gtttactcgcagtggcgagttgcgacagacaactctacgggagcagactagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 17070491  T
Q  101 aggaaactcaacatatg 117  Q
    |||||||| ||| ||||    
T  17070490 aggaaacttaacctatg 17070474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 12207829 - 12207693
Alignment:
Q  158 catggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattat 257  Q
    ||||| ||||||||| || ||| ||| || |||||||  ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |    
T  12207829 catggattctacactctttaattcaaaaagcatactc--aaaacctaacccccaattcccaatttcaactagaaccttgctaaaccaaaatcagaattgt 12207732  T
Q  258 ataaccattatcattgagagatagtctcacccttacctt 296  Q
    | |||||||||||||||||| ||||||||||||||||||    
T  12207731 acaaccattatcattgagagttagtctcacccttacctt 12207693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 1856696 - 1856511
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||  ||||  ||||||||||| | ||||||| |  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  1856696 tactcgctgtggcgagttgcgacagacaaatctacgggaacagatcagtttttactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 1856598  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  1856597 gaaactcaacctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 1856511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 25926595 - 25926410
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||  ||| | ||| |||| ||||||| ||||||||| ||||    
T  25926595 tactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaatgccccaattt-catcaacccaaatcccaaattttatag 25926497  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||| ||| ||||||||||||| | ||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  25926496 gaaactgaacctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 25926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 4325921 - 4326020
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  4325921 tttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgtcatggtttctacact 4326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 12201224 - 12201088
Alignment:
Q  158 catggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattat 257  Q
    ||||| ||||||||| || |||  || ||||||||||  |||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||| |    
T  12201224 catggattctacactctttaattgaaaaatcatactc--aaaacctaacccccaattcccaatttcaactagaatcttgctaaaccaaaatcagaattgt 12201127  T
Q  258 ataaccattatcattgagagatagtctcacccttacctt 296  Q
    | ||| |||| ||||||||| ||||||||||||||||||    
T  12201126 acaactattaccattgagagttagtctcacccttacctt 12201088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 39431406 - 39431311
Alignment:
Q  81 acccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    ||||||| |||| ||||||||||||||  |||||||| |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  39431406 acccaaatcccatatttgataggaaacataacatatgattattctacaacctgaacatcaattcttaacacaattgacatggtttctacacttttc 39431311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 13648107 - 13648223
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| ||| ||| |||||||||||||||||| | ||| |||| |||||||| ||||| |||||| ||||||||||||||| | ||||||||||||||    
T  13648107 tttcatctacctaaatcccaaatttgataggaaatttaacctatgattattctacaacctaaacatcaattcttaacacaattttgatggtttctacact 13648206  T
Q  173 tttcaatccaagaatca 189  Q
    ||||||| ||| |||||    
T  13648207 tttcaattcaaaaatca 13648223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 44190443 - 44190340
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| ||||||| |||| ||||||||||||||| ||| |||| |||||||| |||||||||||| ||||||||| ||||||||||| ||||| ||||    
T  44190443 tttcatctacccaaatcccacatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaactcaattgtcatgttttcttcact 44190344  T
Q  173 tttc 176  Q
    ||||    
T  44190343 tttc 44190340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 16550302 - 16550156
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||||||| |  |||  ||| ||||||||||||||||||   |||||| ||| | ||| |||| ||||||| |||||||||||    
T  16550302 gtttactcgctgtggcgagttgcgatgggcaaatctatgggaacataccagttttctttccaaaagccccaattt-catcaacccaaatcccaaatttga 16550204  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||| ||||||||| ||||||||||||| | ||||||| || |||||||    
T  16550203 tagaaaactcaacctatgtttattctacagcctgaacttcaattctta 16550156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16615360 - 16615506
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||||||| |  |||  ||| ||||||||||||||||||   |||||| ||| | ||| |||| ||||||| |||||||||||    
T  16615360 gtttactcgctgtggcgagttgcgatgggcaaatctatgggaacataccagttttctttccaaaagccccaattt-catcaacccaaatcccaaatttga 16615458  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||| ||||||||| ||||||||||||| | ||||||| || |||||||    
T  16615459 tagaaaactcaacctatgtttattctacagcctgaacttcaattctta 16615506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 296
Target Start/End: Original strand, 7530089 - 7530181
Alignment:
Q  205 acccccaattcccaatttcaactagaactat-gctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    |||||||||| |||| ||||||||||||| | |||||||||||||||||| |||| |||  ||||||||||||| ||||||||||||||||||    
T  7530089 acccccaatttccaaattcaactagaactcttgctaaatcaaaatcagaagtatacaactgttatcattgagagttagtctcacccttacctt 7530181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 13256517 - 13256624
Alignment:
Q  72 ttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    |||||||| ||||||| |||||||||||||||||||| | | |||| |||| ||| ||| |||||||| |||||||||||||||   ||| |||||||||    
T  13256517 ttttcatcaacccaaatcccaaatttgataggaaacttatcctatgattatcctacaacttgaacatcaattcttaacacaatttcgatgatttctacac 13256616  T
Q  172 ttttcaat 179  Q
    ||||||||    
T  13256617 ttttcaat 13256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 13864573 - 13864486
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||||||||| ||| |||| ||||| || || ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  13864573 cccaaatttgttaggaaacttaacctatgattattatacaatctgaacatcaattcttaacacaattgtcatgatttctacacttttc 13864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 16462910 - 16462997
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||||||||||||| ||  |||| |||||||| |||||||||||| |||||||||||||||| ||| |||||||||| ||||    
T  16462910 cccaaatttgataggaaacttaatctatgattattctacaacctgaacatcaattcttaacacaattgccatcgtttctacacatttc 16462997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32160500 - 32160354
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||||||||| | ||  |||||  |||| |||||||||||  |||||| ||| |  ||||||| | ||||| | |||||||||    
T  32160500 gtttactcgctgtggcgagttgcgacggaaaaatctacgcaaacaaaccagttttcactccaaaagcccca-atttcatcaatccaaatctcaaatttga 32160402  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  32160401 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 32160354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 297
Target Start/End: Complemental strand, 15727512 - 15727367
Alignment:
Q  153 attgtcatggtttctacacttttcaatccaagaatc-atactccaaaaacctaacccccaattcccaatttcaactagaa--ctatgctaaatcaaaatc 249  Q
    ||||||||||||||||||||||||||| ||| |||| ||| ||  ||||||||| || ||| |||||| || ||||||||  || || |||||||| |||    
T  15727512 attgtcatggtttctacacttttcaattcaaaaatctataatc--aaaacctaaacctcaaatcccaaatt-aactagaaccctttgttaaatcaacatc 15727416  T
Q  250 agaattatata-accattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||| || || ||||||||||| |||||||||||||||||||    
T  15727415 agaattatatagactataatcattgagagttagtctcacccttacctta 15727367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 296
Target Start/End: Complemental strand, 39995007 - 39994857
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaaga-atcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatc 243  Q
    |||||| |||||||| | ||||||||||||  || ||| | |||||| ||  ||||||||||||| |||| |||| ||||||||||||  | | ||||||    
T  39995007 taacactattgtcatagattctacactttttgattcaaaatatcataatc--aaaacctaacccctaatttccaaattcaactagaacccttgttaaatc 39994910  T
Q  244 aaaatcagaattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    |||||||||| |||| ||| |||||||||||||| |||||||||| |||||||    
T  39994909 aaaatcagaagtatagaactattatcattgagagttagtctcacctttacctt 39994857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 10520799 - 10520876
Alignment:
Q  283 ctcacccttaccttaattcagaag-aaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| ||||||||||| | || | | ||||||||||||||||||||||||||||||||    
T  10520799 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacttggctctacttgctcttctctccctt 10520876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 18455797 - 18455712
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||||||| ||  |||  |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  18455797 caaatttgttaggaaacttaagctataattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 18455712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 23557404 - 23557461
Alignment:
Q  119 ttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  23557404 ttattctacaacctgaacatcaattcataacacaattgtcatggtttctacacttttc 23557461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 18570432 - 18570522
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattcta 126  Q
    ||||||||| | ||| |||||||||||||||||||| |||||| ||||||||| ||||||||  | |||||| ||||| |||||||||||||    
T  18570432 ctacgggaagaaacctgttttcagccaaaaacccaa-ttttcaaccacccaaatcccaaattcaagaggaaattcaacctatgtttattcta 18570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 11311080 - 11311126
Alignment:
Q  264 attatcattgagagatagtctcacccttaccttaattcagaagaaaa 310  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  11311080 attattattgagagatagtctcacccttaccttaattcagaagaaaa 11311126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 38295405 - 38295490
Alignment:
Q  51 gttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||  ||||||||||| || |||| |||||||| | ||||||||    
T  38295405 gttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactctacctatgattattctacatcctgaaca 38295490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 46625987 - 46626080
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaa-gaaaaatgcacaacga---tcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||||||||  |||   || | |||||||||||||||||||| |||||||||||    
T  46625987 atcattgagagttagtctcacccttatcttaattcagaaggaaaaatgcac--cgaaattcaggttcacttggctctacttgctattctctccctt 46626080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 11854572 - 11854495
Alignment:
Q  283 ctcacccttaccttaattcagaag-aaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| ||||||||||| | || | | ||||||||||||||||||||||||| ||||||    
T  11854572 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacttggctctacttgctcttctatccctt 11854495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 14168702 - 14168645
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctct 339  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  14168702 ctcacccttaccttaattcagaaggacaaatgcacaacgatcggattctcttggctct 14168645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 14172949 - 14172892
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctct 339  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  14172949 ctcacccttaccttaattcagaaggacaaatgcacaacgatcggattctcttggctct 14172892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 12754893 - 12754829
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    ||||||| ||||||| |||||||||||||||||||| ||| |||| |||||||| ||||||||||    
T  12754893 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 12754829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 33405629 - 33405705
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||| |||| |||||||||||| | || |||||| || || ||||||||||||||||||||||    
T  33405629 ctcacccttaccttaatttagaatgaaaaatgcacagcaattggattctctgggttctacttgctcttctctccctt 33405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 13315347 - 13315245
Alignment:
Q  35 ctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctg 133  Q
    ||||| ||||| |||||||||||  |||||||||| | ||| |||| ||||||| |||||||||||||| |||||| || |||| |||||||| ||||||    
T  13315347 ctacgagaacagaccagttttcactccaaaaaccccaattt-catcaacccaaatcccaaatttgatagaaaactctacctatgattattctacaacctg 13315249  T
Q  134 aaca 137  Q
    ||||    
T  13315248 aaca 13315245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 29052394 - 29052336
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  29052394 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattctta 29052336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 23556215 - 23556272
Alignment:
Q  119 ttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||| |||||| |||| |||||| ||||||||||||||||||||||||    
T  23556215 ttattctacaaccttaacatcaattcataacacgattgtcatggtttctacacttttc 23556272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 42042159 - 42042220
Alignment:
Q  239 aaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    |||||||||||||||| ||| | | || ||||||||||| ||||||||||||||||||||||    
T  42042159 aaatcaaaatcagaatcatacatctataatcattgagagttagtctcacccttaccttaatt 42042220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 8931017 - 8930945
Alignment:
Q  51 gttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttatt 123  Q
    |||||||||||||||| |||||||||| ||||||||| | ||||||  | | |||||||||| ||||||||||    
T  8931017 gttttcagccaaaaactcaatttttcaaccacccaaatctcaaattcaaaaagaaactcaacctatgtttatt 8930945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 19194995 - 19195078
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaa 135  Q
    |||||| ||||||| || |  ||||||| ||||||| |||||||||||||||||||| ||| |||| |||||||| || |||||    
T  19194995 ttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaatctgaa 19195078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 36300890 - 36300816
Alignment:
Q  51 gttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattcta 126  Q
    |||||||||||||||||||| ||||||  |||||||| || |||||  | |||||||||||| |||||||||||||    
T  36300890 gttttcagccaaaaacccaa-ttttcaatcacccaaatcctaaattcaaaaggaaactcaacctatgtttattcta 36300816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 13664877 - 13664915
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaa 305  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  13664877 atcattgaaagatagtctcacccttaccttaattcagaa 13664915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 15214541 - 15214603
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| ||||||||||||||    
T  15214541 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctt 15214603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 11382898 - 11382865
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcag 303  Q
    ||||||||||||||||||||||||||||||||||    
T  11382898 attgagagatagtctcacccttaccttaattcag 11382865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 11389375 - 11389342
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcag 303  Q
    ||||||||||||||||||||||||||||||||||    
T  11389375 attgagagatagtctcacccttaccttaattcag 11389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 15168206 - 15168243
Alignment:
Q  273 gagagatagtctcacccttaccttaattcagaagaaaa 310  Q
    |||||||||||||||||||||||||||| |||||||||    
T  15168206 gagagatagtctcacccttaccttaatttagaagaaaa 15168243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 14249764 - 14249708
Alignment:
Q  202 ctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 258  Q
    |||| ||| |||||||||||| ||| ||||||||| |||| ||||||||||||||||    
T  14249764 ctaaacccaaattcccaattttaaccagaactatgttaaaccaaaatcagaattata 14249708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 16009604 - 16009636
Alignment:
Q  270 attgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||||||||||||    
T  16009604 attgagagatagtctcacccttaccttaattca 16009636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 14274063 - 14274118
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattc 144  Q
    |||||||||| ||||||||| ||| |||| |||||||| |||||||||||| ||||    
T  14274063 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 14274118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 14580709 - 14580638
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| |||||||||   ||| | ||||||||||||||||| |||||||||    
T  14580709 ctcacccttaccttaattcagatgaacaaatgcacataaatctgtttcacttggctctacttggctcttctc 14580638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 37539252 - 37539334
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaa 135  Q
    |||||| ||||||| |||| ||| |||| |||||||  ||||||||||||||||||| ||| || | |||||||| ||||||||    
T  37539252 ttttcacccaaaaatccaaattt-catctacccaaattccaaatttgataggaaacttaacctaagattattctacaacctgaa 37539334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 13318705 - 13318775
Alignment:
Q  284 tcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| || |||||||||   || |||||| ||||||||||||| |||||||||    
T  13318705 tcacccttaccttaattcagaaggacaaatgcacagaaattggattctcttggctctacttggctcttctc 13318775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 13679518 - 13679556
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaa 305  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  13679518 atcattgaaagatagtctcacccttaccttatttcagaa 13679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 25942312 - 25942362
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatc 139  Q
    |||||||||||||||||||| ||| || | |||||||| ||||||||||||    
T  25942312 cccaaatttgataggaaacttaacctaagattattctacaacctgaacatc 25942362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 12555454 - 12555511
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctct 339  Q
    ||||| ||||||||||||||||| || |||  |||||||||||||||| |||||||||    
T  12555454 ctcactcttaccttaattcagaaagacaaaaacacaacgatcggattctcttggctct 12555511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 42374468 - 42374415
Alignment:
Q  136 catcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  42374468 catcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 42374415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 46347871 - 46347838
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  46347871 gattctcttggctctacttgctcttctctccctt 46347838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 708733 - 708685
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||||||||||||||||| ||| |||| |||||||| ||||| ||||    
T  708733 cccaaatttgataggaaacttaacctatgattattctacaacctaaaca 708685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 6412892 - 6412920
Alignment:
Q  330 acttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||    
T  6412892 acttggctctacttgctcttctctccctt 6412920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 10895818 - 10895786
Alignment:
Q  270 attgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||| ||||||||    
T  10895818 attgagagatagtctcacccttacgttaattca 10895786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 14265234 - 14265178
Alignment:
Q  202 ctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 258  Q
    |||| ||| |||||||||||| ||| ||||||||| ||||  |||||||||||||||    
T  14265234 ctaaacccaaattcccaattttaaccagaactatgttaaactaaaatcagaattata 14265178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 14423012 - 14423072
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattc 329  Q
    |||||||||||||||||||||||||||| || ||| ||| |||  |||||| |||||||||    
T  14423012 attgagagatagtctcacccttaccttagtttagatgaacaaaaacacaacaatcggattc 14423072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 16677323 - 16677355
Alignment:
Q  270 attgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||||| ||||||    
T  16677323 attgagagatagtctcacccttacctgaattca 16677355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 17651559 - 17651591
Alignment:
Q  270 attgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||||| ||||||    
T  17651559 attgagagatagtctcacccttacctgaattca 17651591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 37243411 - 37243383
Alignment:
Q  330 acttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||    
T  37243411 acttggctctacttgctcttctctccctt 37243383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 37726905 - 37726841
Alignment:
Q  235 tgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||| ||||||| |||||||| | |  ||||||||||| |||||||||||||||||||    
T  37726905 tgctaaatcaacatcagaagttatataatctaaaatcattgagagttagtctcacccttacctta 37726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 47975119 - 47975055
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    ||||||| |||||||  ||||||||||||| ||||| ||  |||| |||||||| ||||||||||    
T  47975119 tttcatctacccaaattccaaatttgatagaaaacttaatctatgattattctacaacctgaaca 47975055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 15534875 - 15535176
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15534875 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 15534974  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15534975 aggaaactcaacatatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaa 15535074  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15535075 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaatt 15535174  T
Q  301 ca 302  Q
    ||    
T  15535175 ca 15535176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 36038564 - 36038865
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36038564 gtttactcgctatggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 36038663  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  36038664 aggaaactcaacctatgtttattctacaatctgaacatcgattcttaacacaattgccatcgtttctacacttttcaatccaagaatcatactccaaaaa 36038763  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  36038764 cctaacccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattaccattgagagatagtctcacccttacctgaatt 36038863  T
Q  301 ca 302  Q
    ||    
T  36038864 ca 36038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 49547242 - 49546949
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49547242 gtttactcgctgtggcgagttgcgacgaacaactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 49547143  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  49547142 aggaaactcaacctatgtttattctacaatctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaag-atcgtactccaaaaa 49547044  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacct 295  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49547043 cctaacccccaattcccaatttcaactagaactatgctaaaccaagatcagaattatataaccattatcattgagagatagtctcacccttacct 49546949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 33849496 - 33849716
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33849496 gtttactcgctgtggcgagttgcgacgaacagctctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 33849595  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  33849596 aggaaactcaacctatgtttattctacaacatgaacatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatcatactcccaaaa 33849695  T
Q  201 cctaacccccaattcccaatt 221  Q
    |||||||||||||||||||||    
T  33849696 cctaacccccaattcccaatt 33849716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 28385997 - 28386185
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||||| |||||| || | |||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  28385997 gtttactcgctgtggcgagttgcgacagacaactctacggaaatagaccagtttccagccaaaaacccaaattttcatccacccaaaccccaaatttgat 28386096  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  28386097 aggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 28386185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 16277515 - 16277366
Alignment:
Q  72 ttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||||||||||||| ||||||||||||||    
T  16277515 ttttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacac 16277416  T
Q  172 ttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatt 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16277415 ttttcaatccaagaatcatactcccaaaacctaacccccaattcccaatt 16277366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 53387125 - 53386976
Alignment:
Q  72 ttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||||||||||||| ||||||||||||||    
T  53387125 ttttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacac 53387026  T
Q  172 ttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatt 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53387025 ttttcaatccaagaatcatactcccaaaacctaacccccaattcccaatt 53386976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 32490656 - 32490792
Alignment:
Q  158 catggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattat 257  Q
    ||||| ||||||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |    
T  32490656 catggattctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaatttcaactagaaccttgctaaatcaaaatcagaattgt 32490753  T
Q  258 ataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||||  |||||||| ||||||||||||||||||    
T  32490754 ataaccattactattgagagttagtctcacccttacctt 32490792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 9638763 - 9638877
Alignment:
Q  3 ttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    ||||||||||||||||||||||||  ||||| ||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  9638763 ttactcgctgtggcgagttgcgacagacaacactacgggaacagaccaattttcagtcaaaaactcaatttttcatccacccaaaccccaaatttgatag 9638862  T
Q  103 gaaactcaacatatg 117  Q
    |||||| ||| ||||    
T  9638863 gaaacttaacctatg 9638877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 146 - 296
Target Start/End: Complemental strand, 15416031 - 15415882
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 244  Q
    |||||| |||| ||||| |||||||||||||||| ||| ||||||| ||  |||||||||||||||| |||||| ||||||||||||  | |||||||||    
T  15416031 taacactattgccatggattctacacttttcaattcaaaaatcataatc--aaaacctaacccccaaatcccaaattcaactagaacccttgctaaatca 15415934  T
Q  245 aaatcagaattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||| |||| ||| |||||||||||||| ||||||||||||||||||    
T  15415933 aaatcagaagtatagaactattatcattgagagttagtctcacccttacctt 15415882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 296
Target Start/End: Original strand, 15318849 - 15318969
Alignment:
Q  175 tcaatccaagaatcatactccaaaaacctaacccccaa-ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattg 273  Q
    ||||||||| |||||||||   | |||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||| || ||||| ||||||||    
T  15318849 tcaatccaaaaatcatactt--agaacctaacccgcaaattcccaatttcaactagaactttgttaaatcaaaatcagaattgtagaaccaatatcattg 15318946  T
Q  274 agagatagtctcacccttacctt 296  Q
    |||||||||||||||||||||||    
T  15318947 agagatagtctcacccttacctt 15318969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 296
Target Start/End: Complemental strand, 16370872 - 16370724
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 244  Q
    |||||| |||| ||| ||||||||||| |||||| ||| ||||||| ||  |||||||||||||||||| |||| ||||||||||||  | |||||||||    
T  16370872 taacaccattgccatagtttctacactcttcaattcaaaaatcataatc--aaaacctaacccccaatttccaaattcaactagaacccttgctaaatca 16370775  T
Q  245 aaatcagaattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||| |||| | | |||||||||||||| ||||||||||||||||||    
T  16370774 aaatcagaagtataca-ctattatcattgagagttagtctcacccttacctt 16370724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 15008720 - 15008855
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||||| ||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||| |    
T  15008720 gtttactcgctgtggcgagttgccacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttta 15008818  T
Q  100 taggaaactcaacatatgtttattctataacctgaac 136  Q
    ||||||||||||| ||||||||||||| | |||||||    
T  15008819 taggaaactcaacctatgtttattctacagcctgaac 15008855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 15076323 - 15076414
Alignment:
Q  211 aattcccaatttcaactagaactatgctaaatc--aaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    |||||| |||||| |||||||||||||||||||  ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  15076323 aattccaaatttctactagaactatgctaaatccaaaaatcagaattacataaccatcattattgagagatagtctcacccttaccttaatt 15076414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 10694545 - 10694399
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||||||||||||| |||||| ||||  ||||| ||||| |||| ||||||  |||||| ||| |  ||||||| ||||||| |||||||||||    
T  10694545 gtttactcgctgtggcgagtggcgacggacaaatctacgagaacagaccaattttcactccaaaagcccca-atttcatcaacccaaatcccaaatttga 10694447  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  10694446 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 10694399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 15344776 - 15344863
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||||||||| ||| |||| |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  15344776 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgtcatgatttctacacttttc 15344863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 297
Target Start/End: Original strand, 18230565 - 18230791
Alignment:
Q  72 ttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    |||||||| || |||| |||||||||||||||||||| | | |||| |||| ||| |||||||||||| |||||||||||||||   ||| |||||||||    
T  18230565 ttttcatcaacacaaatcccaaatttgataggaaacttatcctatgattatcctacaacctgaacatcaattcttaacacaatttcgatgatttctacac 18230664  T
Q  172 ttttcaatccaagaatc-atactccaaaaacctaacccccaattcccaatttcaactagaa--ctatgctaaatcaaaatcagaattata-taaccatta 267  Q
    |||||||| ||| |||| ||| ||  |||||||||  |||||||||||| || ||| | ||  |  || ||||||||||||||||| |||  ||| || |    
T  18230665 ttttcaattcaaaaatcaataatc--aaaacctaa-tcccaattcccaaatttaaccacaaccccttgttaaatcaaaatcagaatcatacaaactataa 18230761  T
Q  268 tcattgagagatagtctcacccttacctta 297  Q
    |||||||||| ||| |||||||||||||||    
T  18230762 tcattgagagttagcctcacccttacctta 18230791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 18165447 - 18165378
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctc 352  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  18165447 ctcacccttaccttaatccagaagaaaaatgcacaacgatcggattcgcttggctctacttactcttctc 18165378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 12611752 - 12611839
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||| ||||| ||| |||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  12611752 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 12611839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 15447586 - 15447501
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||| ||||| ||| |||| |||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  15447586 caaatttgttagcaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgtcatggtttctgcacttttc 15447501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 23802613 - 23802528
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  23802613 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 23802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 15069727 - 15069814
Alignment:
Q  215 cccaatttcaactagaactatgctaaatc--aaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||| |||| |||||||||||| |  ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  15069727 cccaatttctactataactatgctaaacccaaaaatcagaattacataaccatcattattgagagatagtctcacccttaccttaatt 15069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 10908311 - 10908165
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||||||||||||| |||||| ||||  ||||| ||||| |||| ||||||  |||||| ||| |  ||||||| |||||||   |||||||||    
T  10908311 gtttactcgctgtggcgagtggcgacggacaaatctacgagaacagaccaattttcactccaaaagcccca-atttcatcaacccaaataacaaatttga 10908213  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  10908212 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 10908165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 40620284 - 40620430
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||| ||||||||| ||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| |||||||||||    
T  40620284 gtttactcgttgtggcgaggtgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttga 40620382  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
     |||||||||||| ||||||||| |||   ||||||| || |||||||    
T  40620383 gaggaaactcaacctatgtttatcctacggcctgaacttcaattctta 40620430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 51463239 - 51463152
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||| |||||  || |||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  51463239 cccaaatttgttagaaaactttacctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 51463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 53904507 - 53904430
Alignment:
Q  283 ctcacccttaccttaattcagaag-aaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| ||||||||||| | || | | ||||||||||||||||||||||||||||||||    
T  53904507 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacttggctctacttgctcttctctccctt 53904430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 14549474 - 14549538
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  14549474 tttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaaca 14549538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 35660712 - 35660776
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  35660712 tttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaaca 35660776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 17177369 - 17177426
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctct 339  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  17177369 ctcacccttaccttaattcagaaagacaaatgcacaacgatcggattctcttggctct 17177426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 52501475 - 52501551
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| |||||||||||| | || | |||| || || ||||||||||||||||||||||    
T  52501475 ctcacccttaccttaattcagaatgaaaaatgcacagcaattgaattctctgggttctacttgctcttctctccctt 52501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 16485671 - 16485741
Alignment:
Q  284 tcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    ||||||||||||||||||||| ||| |||||||||   ||||||||||||||||||||||| |||||||||    
T  16485671 tcacccttaccttaattcagatgaacaaatgcacagaaatcggattcacttggctctacttggctcttctc 16485741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 13043950 - 13043893
Alignment:
Q  119 ttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||    
T  13043950 ttattctacaacctgaacatcaattcttaacacaattactatggtttctacacttttc 13043893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 16296674 - 16296759
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||| ||||||| ||||  ||| ||| ||||||| |||||||||||||||||||| ||| |||| |||||| | ||||||||||    
T  16296674 ttttcacccaaaaaaccaaaatttaatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaacctgaaca 16296759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 7360172 - 7360248
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| |||||||||||| | |  |||||| || || |||||||||| |||||||||||    
T  7360172 ctcacccttaccttaattcagaatgaaaaatgcacagcaaatggattctctgggttctacttgcttttctctccctt 7360248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 19434887 - 19434823
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    ||||||| ||| ||| |||||||||||||||||||| ||| |||| |||||||| ||||||||||    
T  19434887 tttcatctaccaaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 19434823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 45005827 - 45005886
Alignment:
Q  130 cctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  45005827 cctgaacatcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatca 45005886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 56114825 - 56114762
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| |||||||||||||||    
T  56114825 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctta 56114762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 16228281 - 16228224
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctct 339  Q
    |||||||||||||||| ||||| ||| ||||||||||| ||||||||| |||||||||    
T  16228281 ctcacccttaccttaaatcagatgaacaaatgcacaacaatcggattctcttggctct 16228224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 14035731 - 14035795
Alignment:
Q  235 tgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||| ||||||| |||||||| | || ||||||||||| |||||||||||||||||||    
T  14035731 tgctaaatcaacatcagaagttatataatctataatcattgagagttagtctcacccttacctta 14035795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 24046543 - 24046480
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| ||||| |||||||||    
T  24046543 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacacttacctta 24046480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 30240045 - 30240116
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||| ||||||||||||||||| ||| ||||||||||  ||| | ||||||||||||||||| |||||||||    
T  30240045 ctcatccttaccttaattcagatgaacaaatgcacaaaaatctggttcacttggctctacttggctcttctc 30240116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 304
Target Start/End: Original strand, 17143263 - 17143297
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcaga 304  Q
    |||||||| ||||||||||||||||||||||||||    
T  17143263 attgagagttagtctcacccttaccttaattcaga 17143297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 359
Target Start/End: Original strand, 40909468 - 40909497
Alignment:
Q  330 acttggctctacttgctcttctctcccttg 359  Q
    ||||||||||||||||||||||||||||||    
T  40909468 acttggctctacttgctcttctctcccttg 40909497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 26076876 - 26076848
Alignment:
Q  330 acttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||    
T  26076876 acttggctctacttgctcttctctccctt 26076848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 12305816 - 12306117
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12305816 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 12305915  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12305916 aggaaactcaacctatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 12306015  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12306016 cctaacccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 12306115  T
Q  301 ca 302  Q
    ||    
T  12306116 ca 12306117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 29544319 - 29544031
Alignment:
Q  14 ggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaaca 113  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  29544319 ggcgagttgtgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccactcaaaccccaaatttgataggaaactcaacc 29544220  T
Q  114 tatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 213  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29544219 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcataccccaaaaacctaacccccaat 29544120  T
Q  214 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29544119 tcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaattca 29544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 14 - 304
Target Start/End: Original strand, 3803580 - 3803870
Alignment:
Q  14 ggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaaca 113  Q
    |||||||||||||  ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3803580 ggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacc 3803679  T
Q  114 tatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaat 213  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3803680 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatcatactccaaaaacctaacccccaat 3803779  T
Q  214 tcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcaga 304  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3803780 tcccaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcaga 3803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 54521516 - 54521810
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54521516 gtttactcgctgtggcgagttgcgacgaacaactctacggaaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 54521615  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||| ||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54521616 aggaaactcaacctatatttattctacaatctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaa 54521715  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacct 295  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  54521716 cctaaccctcaatttccaatttcaactagaactatgctaaaccaagatcagaattatataaccattatccttgagagatagtctcacccttacct 54521810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 73 - 296
Target Start/End: Complemental strand, 55291828 - 55291605
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  55291828 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttctacact 55291729  T
Q  173 tttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcatt 272  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  55291728 tttcaatccaagaatcatactcccaaaacctaacccccaattcccaatttcaactagaactattctaaaccaaaatcagaattatataaccattatcatt 55291629  T
Q  273 gagagatagtctcacccttacctt 296  Q
    ||||||||||||||||||||||||    
T  55291628 gagagatagtctcacccttacctt 55291605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 85 - 302
Target Start/End: Complemental strand, 46722801 - 46722584
Alignment:
Q  85 aaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaag 184  Q
    |||||||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||| ||| ||||| |||||||||||||||||    
T  46722801 aaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgccatagtttccacacttttcaatccaag 46722702  T
Q  185 aatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtct 284  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |   |    
T  46722701 aatcatactcccaaaacctaacccccaattcccaatttcaactagaactattctaaaccaaaatcagaattatataaccattatcattgagagtaaacat 46722602  T
Q  285 cacccttaccttaattca 302  Q
    ||||||||||| ||||||    
T  46722601 cacccttacctgaattca 46722584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 13436992 - 13437180
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13436992 gtttactcgctgtggcgagttgcgacgaacaactctatgggaacagaccagttttcagccaaaaacccaatttttcattcacccaaaccccaaatttgat 13437091  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    |||||||||||||||||||| ||| |||||    
T  13437092 aggaaactcaacctatgtttattctacaacctgaacatcgattcttaacacaatttcgttggtttctacacttttcaattcaaaaatca 13437180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 42281 - 42469
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42281 gtttactcgctgtggcgagtttcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 42380  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  42381 aggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 42469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 16324839 - 16324651
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16324839 gtttactcgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 16324740  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||  |||  |||||||| |||||||||||| |||||||||||||||   |||||||||||||||| |||| ||| |||||    
T  16324739 aggaaacttaagctataattattctacaacctgaacatcaattcttaacacaatttcaatggtttctacactttccaattcaaaaatca 16324651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 10555132 - 10555280
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| ||| |||||||||||||||||||||||| ||| |||| ||||||||  ||||||||||| |||||||||||||||| |||||||||||||||    
T  10555132 tttcatctaccgaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacact 10555231  T
Q  173 tttcaatccaagaatcatactccaaaaacctaacccccaattcccaatt 221  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  10555232 tttcaatccaagaatcatactcccaaaacctaaaccccaattcccaatt 10555280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 9534355 - 9534449
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9534355 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctctcccttgtcctt 9534449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 5224080 - 5224264
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||  ||||  ||||||||||| || ||||||||  |||||| ||||||||  |||| ||||||| ||||||||||||||    
T  5224080 tactcgctgtggcgagttgcgacagacaaatctacgggaacaaactagttttcactccaaaaccccaattt--catcaacccaaatcccaaatttgatag 5224177  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  5224178 gaaactcaacctatgtttattctacagcctgaacttcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatca 5224264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 15238972 - 15239108
Alignment:
Q  158 catggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattat 257  Q
    ||||| ||||||||| || ||| ||| ||||||||||  |||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||| |    
T  15238972 catggattctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaattttaactagaaccttgctaaaccaaaatcagaattgt 15239069  T
Q  258 ataaccattatcattgagagatagtctcacccttacctt 296  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  15239070 ataaccattatcattgagagttagtctcacccttacctt 15239108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 26054730 - 26054545
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||| ||||||||||||||||||| ||||  ||||| ||||| |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  26054730 tacttgctgtggcgagttgcgacggacaaatctacgagaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 26054632  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||||||||||   |||||||||||| |||||||| ||| |||||    
T  26054631 gaaactcaacctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacaattttcaattcaaaaatca 26054545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 14641848 - 14641733
Alignment:
Q  2 tttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgata 101  Q
    |||| ||||||||||||||||||||  ||| | || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14641848 tttattcgctgtggcgagttgcgacagacagcactgcgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaatcccaaatttgata 14641749  T
Q  102 ggaaactcaacatatg 117  Q
    ||||||| ||| ||||    
T  14641748 ggaaacttaacctatg 14641733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 15465851 - 15466036
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgatagg 103  Q
    |||||||||||| | ||||||||| ||||  ||||| ||||| |||||||||||  | |||| ||    ||||||| ||||||| |||| ||||||||||    
T  15465851 tactcgctgtggtgggttgcgacggacaaatctacgagaacagaccagttttcactctaaaagccccaatttcatcaacccaaatcccatatttgatagg 15465950  T
Q  104 aaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||||||||| ||||||||||||| | ||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  15465951 aaactcaacctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 15466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 43549882 - 43549776
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| ||||||| |||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||    
T  43549882 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacact 43549783  T
Q  173 tttcaat 179  Q
    |||||||    
T  43549782 tttcaat 43549776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 18890238 - 18890331
Alignment:
Q  62 aaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaatt 155  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||| |||||| | |||||||||||| |||||||||||||||    
T  18890238 aaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaattcttaacacaatt 18890331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 18893482 - 18893623
Alignment:
Q  47 accagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattctt 146  Q
    |||| |||||| || ||||||||| ||||||||||||||||||||||||||||||| ||||| ||| |||| |||||| | ||| |||||||| ||||||    
T  18893482 accatttttcaccccaaaacccaaattttcatccacccaaaccccaaatttgatagaaaacttaacctatgattattccacaacgtgaacatcaattctt 18893581  T
Q  147 aacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||   || |||| ||||||||||||| ||| |||||    
T  18893582 aacacaattacgat-gtttttacacttttcaattcaaaaatca 18893623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 296
Target Start/End: Complemental strand, 11325199 - 11325049
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaa-tcatactccaaaaacctaacccccaattcccaatttcaactagaac-tatgctaaatc 243  Q
    |||||| |||| ||||||||||||||| |||||| ||| || ||||| ||  ||||||||||||||| || |||| |||||||||||| | || ||||||    
T  11325199 taacactattgccatggtttctacactcttcaattcaaaaaatcatagtc--aaaacctaacccccattttccaaattcaactagaacctttgttaaatc 11325102  T
Q  244 aaaatcagaattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    |||||||||| |||| ||| |||| ||||||||| ||||||||||||||||||    
T  11325101 aaaatcagaagtatagaactattaacattgagagttagtctcacccttacctt 11325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 22652528 - 22652671
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||| ||| ||||  ||||||||||| || ||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  22652528 tactcgctgtggcgagttgcaacggacaaatctacgggaacagactagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 22652626  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||    
T  22652627 gaaactcaacctatgtttattctacagcctgaacttcaattctta 22652671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 12855112 - 12854988
Alignment:
Q  175 tcaatccaagaatcatactccaaaaacctaacccccaa-ttcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattg 273  Q
    ||||||||| |||||||||   | ||||||||| |||| || || ||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  12855112 tcaatccaaaaatcatactt--agaacctaacctccaaatttcctatttcaactagaactttgttaaatcaaaatcagaattgtataaccattatcattg 12855015  T
Q  274 agagatagtctcacccttaccttaatt 300  Q
    |||||||||||   |||||||||||||    
T  12855014 agagatagtctactccttaccttaatt 12854988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16979664 - 16979810
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||| ||||  ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| |||||||  ||||||||||    
T  16979664 gtttactcgctgtggcgagttacgacagacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaattccaaatttga 16979762  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  16979763 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 16979810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 29907422 - 29907512
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattct 125  Q
    ||||||||| | ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| || || ||||||||||||    
T  29907422 ctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29907512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 29948588 - 29948678
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattct 125  Q
    ||||||||| | ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| || || ||||||||||||    
T  29948588 ctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29948678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 29997742 - 29997832
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattct 125  Q
    ||||||||| | ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| || || ||||||||||||    
T  29997742 ctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29997832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 48043729 - 48043640
Alignment:
Q  50 agttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatc 139  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||  |||||||||||||| ||||||||||||| ||| ||||||||    
T  48043729 agttttcatccaaaaacccaatttttcaaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaacttgaacatc 48043640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 45803602 - 45803491
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctga 134  Q
    ||||||||| | ||| |||||||||||||||||||||||| || |||||| || ||||||||  |||||||||||||| ||||||||||||| ||||||     
T  45803602 ctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccaccctaatcccaaattcaataggaaactcaacctatgtttattctacaacctgg 45803504  T
Q  135 acatcgattctta 147  Q
    ||||| |||||||    
T  45803503 acatcaattctta 45803491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 6820011 - 6820098
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  6820011 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgacatagtttctacacttttc 6820098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 16643926 - 16644011
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| |||||| || ||| |||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  16643926 caaatttgttaggaagcttaacctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 16644011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 43929219 - 43929319
Alignment:
Q  76 catccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacactttt 175  Q
    |||| ||||||| |||||||||||||||||||| ||| || | |||||||| ||||| |||||| | |||||||||||||  ||||||||||||||||||    
T  43929219 catctacccaaatcccaaatttgataggaaacttaacctacgattattctacaacctaaacatcaagtcttaacacaattagcatggtttctacactttt 43929318  T
Q  176 c 176  Q
    |    
T  43929319 c 43929319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 50243656 - 50243741
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||||||| ||| |||| |||||||| ||| |||||||| |||||||||||||||  |||||||||||||||||||    
T  50243656 caaatttgttaggaaacttaacctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 50243741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 10833516 - 10833416
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatc 188  Q
    |||||||||||||||||||| ||| |||| |||||||  || ||| ||||| |||||||||||||||   ||||||||||||||||||||| ||| ||||    
T  10833516 cccaaatttgataggaaacttaacctatgattattctgcaatctggacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatc 10833417  T
Q  189 a 189  Q
    |    
T  10833416 a 10833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 24152593 - 24152509
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacactttt 175  Q
    |||||||| || |||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  ||||||||||||||||||    
T  24152593 caaatttgttatgaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacactttt 24152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 3527421 - 3527331
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattcta 126  Q
    ||||||||| | |||  ||||||||||||||||||||||| || ||||||||| ||||||||  |||||||||||||| |||||||||||||    
T  3527421 ctacgggaagaaacctattttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgtttattcta 3527331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 11889260 - 11889334
Alignment:
Q  284 tcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||||||||| | || | ||| ||||||||||||||||||||||||||||    
T  11889260 tcacccttaccttaattcagaagaaaaatgcacaacaattcaggttc-cttggctctacttgctcttctctccctt 11889334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 25201936 - 25202013
Alignment:
Q  49 cagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattcta 126  Q
    ||||||||||||||||||| || |||||| ||| ||||| ||||||||  |||||||||||||| |||||||||||||    
T  25201936 cagttttcagccaaaaaccaaaattttcaaccatccaaatcccaaattcaataggaaactcaacctatgtttattcta 25202013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 297
Target Start/End: Original strand, 13837039 - 13837190
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatca-tactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatc 243  Q
    ||||||||||||||||||||||||||| |||||| ||| ||| | || ||  ||||||||| ||| | |||| ||||| ||| |||||  | |||||| |    
T  13837039 taacacaattgtcatggtttctacactcttcaattcaaaaattaatattc--aaaacctaatcccaatttccaaattt-aaccagaacccttgctaaaac 13837135  T
Q  244 aaaatcagaattatata-accattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||| | || || ||||||||||| |||||||||||||||||||    
T  13837136 aaaatcagaattatacagactataatcattgagagttagtctcacccttacctta 13837190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 12153875 - 12153945
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctc 352  Q
    ||||||||||||||||||||||||||||||||||| | | || | |||||||||||||||||||| |||||    
T  12153875 ctcacccttaccttaattcagaagaaaaatgcacagcaattcaggttcacttggctctacttgctgttctc 12153945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 17497198 - 17497274
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| || ||||||||| | || ||||||| ||||||||||||||||||||||||||||    
T  17497198 ctcacccttaccttaattcagaaagacaaatgcacagcaattcggattc-cttggctctacttgctcttctctccctt 17497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 11913784 - 11913847
Alignment:
Q  235 tgctaaatcaaaatcagaattatataacc-attatcattgagagatagtctcacccttacctta 297  Q
    |||||||||||||||||||||||| |||| || ||||||||||| ||| |||||||||||||||    
T  11913784 tgctaaatcaaaatcagaattatacaacctataatcattgagagttagcctcacccttacctta 11913847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 13692941 - 13693012
Alignment:
Q  283 ctcacccttaccttaattcagaag-aaaaatgcacaacgat-cggattcacttggctctacttgctcttctc 352  Q
    |||||||||||||||||||||||| ||||||||||| | || | | ||||||||||||||||||||||||||    
T  13692941 ctcacccttaccttaattcagaaggaaaaatgcacagcaattcaggttcacttggctctacttgctcttctc 13693012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 11643969 - 11643893
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| ||||||||| || | || ||| ||| ||||||||||||||||||||||||||||    
T  11643969 ctcacccttaccttaattcagaaagaaaaatgcgcagcaattcgggttc-cttggctctacttgctcttctctccctt 11643893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Complemental strand, 17240540 - 17240505
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  17240540 attgagagatagtctcacccttaccttaattcagaa 17240505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 18929273 - 18929308
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  18929273 attgagagatagtctcacccttaccttaattcagaa 18929308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 51602588 - 51602525
Alignment:
Q  235 tgctaaatcaaaatcagaattatataa-ccattatcattgagagatagtctcacccttacctta 297  Q
    |||||||||||||||||||||||| || | || ||||||||||| ||| |||||||||||||||    
T  51602588 tgctaaatcaaaatcagaattatacaatctataatcattgagagttagcctcacccttacctta 51602525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 12275283 - 12275345
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctacttg 344  Q
    |||||||||||||||||||| | ||| |||||||||   ||||||||||||||||||||||||    
T  12275283 ctcacccttaccttaattcaaatgaacaaatgcacagaaatcggattcacttggctctacttg 12275345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 11939047 - 11938999
Alignment:
Q  309 aaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  11939047 aaatgcacaacaatcg-attcccttggctctacttgctcttctctccctt 11938999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 14762782 - 14762745
Alignment:
Q  273 gagagatagtctcacccttaccttaattcagaagaaaa 310  Q
    |||||||||||||||||||||||||||| |||||||||    
T  14762782 gagagatagtctcacccttaccttaatttagaagaaaa 14762745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 15233104 - 15233166
Alignment:
Q  158 catggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaattt 222  Q
    ||||| ||||||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||||    
T  15233104 catggattctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaattt 15233166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 6805139 - 6805091
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||||||||||| ||||| |||||||| |||||||| ||||||||||    
T  6805139 cccaaatttgatagaaaacttaacatatgattattctacaacctgaaca 6805091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 11304932 - 11304856
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| || |||||| |||   |  ||||| ||||||||||||||||||||||| ||||    
T  11304932 ctcacccttaccttaattcagaaagacaaatgctcaatagtttgattctcttggctctacttgctcttctctacctt 11304856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 30123437 - 30123374
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| |||| ||||||||||    
T  30123437 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcaaccttacctta 30123374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 11964101 - 11964025
Alignment:
Q  283 ctcacccttaccttaattcagaagaaa--aatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||| ||  | |||||  |||||||| | |||| |||| ||||||||||||||||||||||||||||    
T  11964101 ctcacccttaccttagttttgcagaaagaaatgcacagcaatcg-attcccttggctctacttgctcttctctccctt 11964025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 50351057 - 50350979
Alignment:
Q  61 aaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatc 139  Q
    ||||||||||  | ||||| ||||||| ||||||||| |||| ||||||  | |||||||||| || ||||||||||||    
T  50351057 aaaaacccaaaatctcatctacccaaatcccaaattttatagaaaactcttcctatgtttattatacaacctgaacatc 50350979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 12203296 - 12203353
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctct 339  Q
    ||||| ||||||||||||||||| |||||||||||| | || |||||| |||||||||    
T  12203296 ctcacgcttaccttaattcagaaggaaaaatgcacatcaattggattctcttggctct 12203353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 12364439 - 12364472
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  12364439 gattcccttggctctacttgctcttctctccctt 12364472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 15519530 - 15519563
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  15519530 gattctcttggctctacttgctcttctctccctt 15519563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 15934110 - 15934053
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctct 339  Q
    |||||||||||||||||||||| ||| |||||||||   || ||||||||||||||||    
T  15934110 ctcacccttaccttaattcagacgaacaaatgcacataaattggattcacttggctct 15934053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 15954115 - 15954058
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctct 339  Q
    |||||||||||||||||||||| ||| |||||||||   || ||||||||||||||||    
T  15954115 ctcacccttaccttaattcagacgaacaaatgcacataaattggattcacttggctct 15954058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 29551893 - 29551930
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaac 319  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  29551893 ctcacccttaccttaattcagaatgaaaaatgcacaac 29551930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Complemental strand, 31689745 - 31689716
Alignment:
Q  331 cttggctctacttgctcttctctcccttgt 360  Q
    ||||||||||||||||||||||||||||||    
T  31689745 cttggctctacttgctcttctctcccttgt 31689716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Original strand, 31944481 - 31944510
Alignment:
Q  331 cttggctctacttgctcttctctcccttgt 360  Q
    ||||||||||||||||||||||||||||||    
T  31944481 cttggctctacttgctcttctctcccttgt 31944510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 14293772 - 14293800
Alignment:
Q  330 acttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||    
T  14293772 acttggctctacttgctcttctctccctt 14293800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 14299399 - 14299427
Alignment:
Q  330 acttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||    
T  14299399 acttggctctacttgctcttctctccctt 14299427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 14647169 - 14647072
Alignment:
Q  159 atggtttctacacttttcaatccaagaatca-tactccaaaaacctaacccccaatt-cccaatttcaactagaactatgctaaatcaaaatcagaatta 256  Q
    |||||||||||||||||  |||||| ||||| || ||  ||||||||| ||| |||| ||||||||| || ||||  ||| |||||||||||||||||||    
T  14647169 atggtttctacactttttcatccaaaaatcaataatc--aaaacctaatcccaaatttcccaatttctaccagaaacatgttaaatcaaaatcagaatta 14647072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 20247816 - 20247784
Alignment:
Q  270 attgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||||| ||||||    
T  20247816 attgagagatagtctcacccttacctgaattca 20247784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 282; Significance: 1e-158; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 10684231 - 10683930
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10684231 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 10684132  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10684131 aggaaactcaacatatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaa 10684032  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10684031 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaatt 10683932  T
Q  301 ca 302  Q
    ||    
T  10683931 ca 10683930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 20261913 - 20262214
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20261913 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 20262012  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20262013 aggaaactcaacatatgtttattctacaatctgaacatcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaa 20262112  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20262113 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaatt 20262212  T
Q  301 ca 302  Q
    ||    
T  20262213 ca 20262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 13101033 - 13100732
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||| | |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13101033 gtttactcgctgtggcgagttgcgacagacatctctacgggaacatgccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 13100934  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||| ||| |||| |||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13100933 aggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaa 13100834  T
Q  201 cctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13100833 cctaacccccaattcacaatttcaactagaactatgctaaaccaaaatcagaattatataaccattatcattgagagatagtctcacccttacctgaatt 13100734  T
Q  301 ca 302  Q
    ||    
T  13100733 ca 13100732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 23338698 - 23338478
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23338698 gtttactcgctgtggcgagttgcgacgaacaactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 23338599  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  23338598 aggaaactcaacctatgtttattctacaacctgaacatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatcatactcccaaaa 23338499  T
Q  201 cctaacccccaattcccaatt 221  Q
    |||||||||||||||||||||    
T  23338498 cctaacccccaattcccaatt 23338478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 20590509 - 20590365
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| |||||||||||||||||||||| ||||| ||| |||| ||||||||  ||||||||||| |||||||||||||||| |||||||||||||||    
T  20590509 tttcatctacccaaaccccaaatttgatagaaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacact 20590410  T
Q  173 tttcaatccaagaatcatactccaaaaacctaacccccaattccc 217  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  20590409 tttcaatccaataatcatactcccaaaacctaacccccaattccc 20590365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 31345876 - 31346061
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| |||||||  |||||||||||||    
T  31345876 tactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaataccaaatttgatag 31345974  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| ||||||||||||||| ||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  31345975 gaaactcaacctatgtttattctatagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 31346061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 21072936 - 21072799
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacac 151  Q
    |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||| |||||| | |||||||||||| |||||||||||    
T  21072936 ttttcaccccaaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaattcttaacac 21072837  T
Q  152 aattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||||   ||||||| ||||||||||||| ||| |||||    
T  21072836 aatttcgatggtttttacacttttcaattcaaaaatca 21072799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 155 - 296
Target Start/End: Original strand, 25652134 - 25652273
Alignment:
Q  155 tgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaat 254  Q
    |||||||| ||||||||| || ||| ||| ||||||  ||  |||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||    
T  25652134 tgtcatggattctacactctttaattcaaaaatcatcatc--aaaacctaacccccaattcccaatttcaactagaatcttgctaaaccaaaatcagaat 25652231  T
Q  255 tatataaccattatcattgagagatagtctcacccttacctt 296  Q
    | |||||| |||||||||||||| ||||| ||||||||||||    
T  25652232 tgtataactattatcattgagagttagtcccacccttacctt 25652273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 18358267 - 18358121
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||| |||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| |||||||||||    
T  18358267 gtttactcactgtggcgagttgcgacggacaaatctacgggaacaaaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttga 18358169  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  18358168 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 18358121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 296
Target Start/End: Original strand, 24161179 - 24161328
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 244  Q
    |||||| |||| |||||||| |||||| || ||| ||| ||||||| ||  |||| ||||||||||||| |||| ||||||||||||  | |||||||||    
T  24161179 taacaccattgccatggtttttacactctttaattcaaaaatcataatc--aaaatctaacccccaatttccaaattcaactagaacccttgctaaatca 24161276  T
Q  245 aaatcagaattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||| |||| ||| |||||||||||||| ||||||||||||||||||    
T  24161277 aaatcagaagtatacaactattatcattgagagttagtctcacccttacctt 24161328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 25183944 - 25184087
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  25183944 tactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 25184042  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||| ||||||||||||| |  |||||| || |||||||    
T  25184043 gaaactcaacctatgtttattctacagtctgaacttcaattctta 25184087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 41301156 - 41301040
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| ||||||| ||||| |||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||    
T  41301156 tttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacact 41301057  T
Q  173 tttcaatccaagaatca 189  Q
    ||||||| ||| |||||    
T  41301056 tttcaattcaaaaatca 41301040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 6483745 - 6483840
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  6483745 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatccgattcccttggctctacttgctcttctctcccttgtcctt 6483840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 6487212 - 6487307
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  6487212 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatccgattcccttggctctacttgctcttctctcccttgtcctt 6487307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 43707258 - 43707171
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||||||||||||| ||| |||| |||||||| ||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  43707258 cccaaatttgataggaaacttaacctatgattattctacaacttgaacatcaattcttaacacaattgccatggtttctacacttttc 43707171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 7187267 - 7187354
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||||||||| ||  |||| |||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  7187267 cccaaatttgttaggaaacttaatctatgattattctacaaccagaacatcaattcttaacacaattatcatggtttctacacttttc 7187354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21081269 - 21081123
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||||||||||||| |||||| | ||  ||||||||| | ||| |||||||  |||||| ||| |  ||||||| ||||||| || ||||||||    
T  21081269 gtttactcgctgtggcgagtggcgacggaaaaatctacgggaaaagacccgttttcactccaaaagcccca-atttcatcaacccaaatcctaaatttga 21081171  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  21081170 taggaaactcaacttatgtttattctacagcctgaacttcaattctta 21081123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21915376 - 21915522
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||| |||||||||||||||| ||||   || ||||||| |||||||||||  |||||| ||| |  ||||||| ||| ||| ||||||||| |    
T  21915376 gtttactcgccgtggcgagttgcgacggacaaatgtatgggaacaaaccagttttcactccaaaagcccca-atttcatcaacctaaatcccaaatttta 21915474  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  21915475 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 21915522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 22173188 - 22173101
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||| ||||  ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  22173188 cccaaatttgttagaaaacataacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 22173101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 25174883 - 25174958
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacga--tcggattcacttggctctacttgctcttctctccct 357  Q
    ||||||||||||||||||||||||||||||||||| | |  || | ||| |||||||||||||||||||||||||||    
T  25174883 ctcacccttaccttaattcagaagaaaaatgcacagcaaattcaggttc-cttggctctacttgctcttctctccct 25174958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 23086390 - 23086452
Alignment:
Q  235 tgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 297  Q
    |||||||||||||||||||||||| | | || ||||||||||| ||| |||||||||||||||    
T  23086390 tgctaaatcaaaatcagaattatacatctataatcattgagagttagcctcacccttacctta 23086452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 12626644 - 12626587
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattctt 146  Q
    ||||||||  |||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  12626644 cccaaattcaataggaaactcaacttatgtttattctacaacctgaacatcaattctt 12626587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 357
Target Start/End: Original strand, 21908387 - 21908471
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccct 357  Q
    ||||||||||||||||||||||||||||||||   ||||||| ||||  | ||||||    |||||||||||||| ||||||||||||    
T  21908387 attgagagatagtctcacccttaccttaattc---agaaaaaagcacggcaatcggacgatcttggctctacttgttcttctctccct 21908471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 28345284 - 28345205
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacct 132  Q
    |||||| |||||||||||| |||| ||| ||| ||| |||||||||||||||||||| ||| |||| |||||||| |||||    
T  28345284 ttttcacccaaaaacccaaatttt-atctacctaaatcccaaatttgataggaaacttaacctatgattattctacaacct 28345205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 23265170 - 23265205
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  23265170 attgagagatagtctcacccttaccttaattcagaa 23265205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 23280238 - 23280273
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  23280238 attgagagatagtctcacccttaccttaattcagaa 23280273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 10039124 - 10039062
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| ||||||||||||||    
T  10039124 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctt 10039062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 149755 - 149670
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||| ||||||| || |  ||||||| ||||||| |||||||||||||||||||| ||| |||| |||||| | || |||||||    
T  149755 ttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaaca 149670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 22012292 - 22012216
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| |||||||||||| | |  |||||| || || |||||||| |||||| ||||||    
T  22012292 ctcacccttaccttaattcagaatgaaaaatgcacagcaaatggattctctgggttctacttgttcttctatccctt 22012216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 35243715 - 35243643
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcactt-ggctctacttgctcttctct 353  Q
    ||||||||||||||||||||||| ||||||||| || | | ||||||| ||| || |||||||||||||||||    
T  35243715 ctcacccttaccttaattcagaatgaaaaatgctcagccaacggattctcttgggttctacttgctcttctct 35243643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 22860992 - 22861039
Alignment:
Q  282 tctcacccttaccttaattcag-aagaaaaatgcacaacgatcggatt 328  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  22860992 tctcacccttaccttaattcagaaagacaaatgtacaacgatcggatt 22861039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 44090243 - 44090172
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctct 353  Q
    ||||||||||||| ||||||||| |||||||||||||| || | |||| || || |||||||||||| ||||    
T  44090243 ctcacccttacctcaattcagaatgaaaaatgcacaacaattgaattctctgggttctacttgctctcctct 44090172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 1383864 - 1383818
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaa 135  Q
    |||||||||||||||||||| ||| |||| |||||||| ||||||||    
T  1383864 cccaaatttgataggaaacttaacctatgattattctacaacctgaa 1383818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 23101488 - 23101458
Alignment:
Q  272 tgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||||||||||    
T  23101488 tgagagatagtctcacccttaccttaattca 23101458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 19661478 - 19661441
Alignment:
Q  273 gagagatagtctcacccttaccttaattcagaagaaaa 310  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  19661478 gagagaaagtctcacccttaccttaatttagaagaaaa 19661441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 22795898 - 22795837
Alignment:
Q  197 aaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 258  Q
    ||||||||  ||| ||||||||||||| || ||||||| | |||| ||||||||||||||||    
T  22795898 aaaacctagacccaaattcccaatttctaccagaactaggttaaaccaaaatcagaattata 22795837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 24659841 - 24659874
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  24659841 gattcccttggctctacttgctcttctctccctt 24659874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 25106619 - 25106562
Alignment:
Q  283 ctcacccttaccttaattcag-aagaaaaatgcacaacgatcggattcacttggctct 339  Q
    ||||||||||||||||||||| |||| || ||||||| ||||||||||  ||||||||    
T  25106619 ctcacccttaccttaattcagaaagacaattgcacaatgatcggattcttttggctct 25106562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 14183686 - 14183630
Alignment:
Q  81 acccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||||  |||||||||||||||||||| || |||| |||||| | ||||||||||    
T  14183686 acccaaattccaaatttgataggaaactctacctatgattattccacaacctgaaca 14183630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 36734664 - 36734616
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||||||||||||||||| ||| || | |||||||| ||||||||||    
T  36734664 cccaaatttgataggaaacttaacctaagattattctacaacctgaaca 36734616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 297109 - 297329
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  297109 gtttactcgctgtggcgagttgcgacgaacaactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 297208  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaa 200  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  297209 aggaaactcaacctatgtttattctacaacctgaacatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatcatactcccaaaa 297308  T
Q  201 cctaacccccaattcccaatt 221  Q
    |||||||||||||||||||||    
T  297309 cctaacccccaattcccaatt 297329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 28313102 - 28313290
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||||| ||||||||  ||||||||||  ||||||||||||||||||||| ||||||||||    
T  28313102 gtttactcgctgtggcgagttgcaacagacaactctacgggaacagaccagtttctagccaaaaacgtaatttttcatccacccaaacctcaaatttgat 28313201  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||| | |||||||||||| |||||||||||||||   ||||||| ||||||||||||| ||| |||||    
T  28313202 aggaaacttaacctatgattattccacaacctgaacatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 28313290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 8276280 - 8276174
Alignment:
Q  11 tgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactca 110  Q
    |||||||||||||||   ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |    
T  8276280 tgtggcgagttgcgagagacaactctacgggaacagaccagttttcagccaaaaacccaatttttcatccaccaaaactccaaatttgataggaaactta 8276181  T
Q  111 acatatg 117  Q
    || ||||    
T  8276180 acctatg 8276174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 29763932 - 29763807
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||||||||||| |||||||||||    
T  29763932 gtttactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatccacccaaatcccaaatttga 29763834  T
Q  100 taggaaactcaacatatgtttattcta 126  Q
    ||||||||||||| |||||||||||||    
T  29763833 taggaaactcaacttatgtttattcta 29763807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 22130252 - 22130136
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| ||||||| |||||||||||||||||||| ||| |||| |||||||| ||||| |||||| ||||||||||||||| | ||||||||||||||    
T  22130252 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaaccttaacatcaattcttaacacaattttgatggtttctacact 22130153  T
Q  173 tttcaatccaagaatca 189  Q
    ||||||| ||| |||||    
T  22130152 tttcaattcaaaaatca 22130136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 50001228 - 50001374
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||| ||||||||||||||||  ||||  |||||||||||||||||||||||  |||||| ||| |  ||||||| ||||||| || ||||||||    
T  50001228 gtttactcgttgtggcgagttgcgacagacaaatctacgggaacataccagttttcactccaaaagcccca-atttcatcaacccaaatccaaaatttga 50001326  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||||||||||||||||| | ||||||| || |||||||    
T  50001327 taggaaactcaacatatgtttattctacagcctgaacttcaattctta 50001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 38056954 - 38056857
Alignment:
Q  19 gttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatg 117  Q
    ||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  38056954 gttgcgacagacaactctacgggaacagaccagttttcagccaaaaacccaatttttca-ccacccaaaccccaaatttgataggaaacttaacctatg 38056857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 300
Target Start/End: Original strand, 24476279 - 24476383
Alignment:
Q  197 aaaacctaacccccaattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataaccattatcattgagagatagtctcacccttacct 295  Q
    |||| |||| ||| ||||||||||||| ||||||||||||||||| | ||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  24476279 aaaatctaaacccaaattcccaatttctactagaactatgctaaacccaaaatcagaattacataaccatcattattgagagatagtctcacccttacct 24476378  T
Q  296 taatt 300  Q
    |||||    
T  24476379 taatt 24476383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 46198032 - 46197899
Alignment:
Q  14 ggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaac 112  Q
    |||||||||||||| ||||  |||||||||||||||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||    
T  46198032 ggcgagttgcgacggacaaatctacgggaacataccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaac 46197934  T
Q  113 atatgtttattctataacctgaacatcgattctta 147  Q
     ||||||||||||| | ||||||| || |||||||    
T  46197933 ctatgtttattctacagcctgaacttcaattctta 46197899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 25091505 - 25091411
Alignment:
Q  211 aattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcaga 304  Q
    ||||||||||| | ||||||||||||||||| | ||||||||||| | |||||| |||| |||||||||||||||||||||||||||||||||||    
T  25091505 aattcccaattactactagaactatgctaaacccaaaatcagaatcacataaccgttattattgagagatagtctcacccttaccttaattcaga 25091411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 300
Target Start/End: Complemental strand, 21526933 - 21526781
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaacta-tgctaaatca 244  Q
    |||||| |||| ||||| |||| |||| || ||| ||| ||||||| ||  ||||||||||||||||||| |||||||||||||||| | ||||||| ||    
T  21526933 taacactattgccatggattcttcactctttaattcaaaaatcataatc--aaaacctaacccccaattctcaatttcaactagaaccattgctaaacca 21526836  T
Q  245 aaatcagaattatataaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||| ||||  || || ||||||||||| || |||||||||||||||||||    
T  21526835 aaatcagaagtata-cactatcatcattgagagttattctcacccttaccttaatt 21526781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 45574230 - 45574130
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatc 188  Q
    |||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||| ||||||||||| ||| ||||    
T  45574230 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctgcacttttcaattcaaaaatc 45574131  T
Q  189 a 189  Q
    |    
T  45574130 a 45574130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 13880745 - 13880660
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  13880745 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 13880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 15315668 - 15315591
Alignment:
Q  282 tctcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||||||||| | | || | ||| ||||||||||||||||||||||||||||    
T  15315668 tctcacccttaccttaattcagaagaaaaatgcacagcaattcaggttcgcttggctctacttgctcttctctccctt 15315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 18419103 - 18419179
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| |||||||||||||| || | |||| || || ||||||||||||||||||||||    
T  18419103 ctcacccttaccttaattcagaatgaaaaatgcacaacaattgaattctctgggttctacttgctcttctctccctt 18419179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 23194739 - 23194667
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattct 145  Q
    ||||||| |||||||| ||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||    
T  23194739 tttcatctacccaaactccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattct 23194667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 34392552 - 34392642
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattcta 126  Q
    ||||||||| | ||| |||||||||||||||||||| ||||||  |||||||| ||||||||  | |||||||||||| |||||||||||||    
T  34392552 ctacgggaagaaacctgttttcagccaaaaacccaa-ttttcaagcacccaaatcccaaattcaaaaggaaactcaacctatgtttattcta 34392642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 36615903 - 36615980
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| | ||||||||| | || ||||||| ||||| ||||||||||||||||||||||    
T  36615903 ctcacccttaccttaattcagaagcacaaatgcacagcaattcggattcccttggttctacttgctcttctctccctt 36615980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 43089354 - 43089431
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| | ||||||||| | || ||||||| ||||| ||||||||||||||||||||||    
T  43089354 ctcacccttaccttaattcagaagcacaaatgcacagcaattcggattcccttggttctacttgctcttctctccctt 43089431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 17902074 - 17901966
Alignment:
Q  30 caaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctata 128  Q
    |||| ||||||||||| |||||||||||  ||||||| ||    ||||||| ||||||| |||||||||||||| |||||| || |||| |||||||| |    
T  17902074 caactctacgggaacagaccagttttcactccaaaaagccccaatttcatcaacccaaatcccaaatttgatagaaaactctacctatgattattctaca 17901975  T
Q  129 acctgaaca 137  Q
    |||||||||    
T  17901974 acctgaaca 17901966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 32651600 - 32651658
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattc 329  Q
    ||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||    
T  32651600 attgagagatagtctcacccttaccttaatttagaag-aaaacacacaacgatcggattc 32651658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 8306407 - 8306492
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||| ||||||| ||||  ||||||| ||||||| |||||||||||||||||||| ||| |||| |||||| | || |||||||    
T  8306407 ttttcacccaaaaaaccaaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaaca 8306492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 18025885 - 18025816
Alignment:
Q  290 ttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||| |||||||||||| | || |||||| || || ||||||||||||||||||||||    
T  18025885 ttaccttaattcagaatgaaaaatgcacagcaattggattctctgggttctacttgctcttctctccctt 18025816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 21665177 - 21665254
Alignment:
Q  282 tctcacccttaccttaattcagaagaaaa-atgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||| ||  | |||||| ||||||||| ||  ||||| ||||||||||||||||||||||||||||    
T  21665177 tctcacccttaccttagttttgcagaaaaaatgcacaacaatttgattctcttggctctacttgctcttctctccctt 21665254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 24723709 - 24723624
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||| ||||||| || |  ||||||  ||||||| |||||||||||||||||||| ||| |||| |||||||| ||||||||||    
T  24723709 ttttcacccaaaaaacccaaatttcatttacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 24723624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 11158118 - 11158205
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccct 357  Q
    ||||||||||| |||||||||||||||||||||||||||   ||| ||||  | |||||||   |||||||||||| | ||||||||||||    
T  11158118 atcattgagagttagtctcacccttaccttaattcagaa---aaacgcacggcaatcggatgatcttggctctactagttcttctctccct 11158205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 19860170 - 19860247
Alignment:
Q  283 ctcacccttaccttaatt---cagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||| ||   ||||| ||||||||||||| || | |||| ||||||||||||||||||||||||||||    
T  19860170 ctcacccttaccttagttttgcagaaaaaaaatgcacaacaattg-attctcttggctctacttgctcttctctccctt 19860247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 329
Target Start/End: Complemental strand, 20437051 - 20436991
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattc 329  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| ||||||| |||||||||    
T  20437051 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattc 20436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 21180339 - 21180280
Alignment:
Q  238 taaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||| ||| | | || ||||||||||| |||||||||||||||||||    
T  21180339 taaatcaaaatcagaatcatacatctataatcattgagagttagtctcacccttacctta 21180280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 6833990 - 6834054
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    ||||||| ||| ||| |||||||||||||| |||||| || |||| |||||||| ||||||||||    
T  6833990 tttcatcaaccaaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaaca 6834054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 7052241 - 7052177
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    ||||||| ||||||| ||||||| |||||||||||| ||| |||| ||||| || ||||||||||    
T  7052241 tttcatctacccaaatcccaaatatgataggaaacttaacctatgattattttacaacctgaaca 7052177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 21188286 - 21188195
Alignment:
Q  47 accagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatc 139  Q
    ||||||||||| |||||||||| | ||  || | ||||||| |||||||||||||||||||   ||||||  |||||||| ||||||||||||    
T  21188286 accagttttcacccaaaaaccccaatta-caactacccaaatcccaaatttgataggaaacattacatattcttattctacaacctgaacatc 21188195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 8686037 - 8686076
Alignment:
Q  257 tataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  8686037 tataaccattaccattgagagttagtctcacccttacctt 8686076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 18712827 - 18712862
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    |||||||||||||||||||| |||||||||||||||    
T  18712827 attgagagatagtctcacccataccttaattcagaa 18712862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 21986124 - 21986077
Alignment:
Q  211 aattcccaatttcaactagaactatgctaaatcaaaatcagaattata 258  Q
    |||||||||||| ||| ||||||||| |||| ||||||||||||||||    
T  21986124 aattcccaattttaaccagaactatgttaaaccaaaatcagaattata 21986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 23713218 - 23713289
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||| | ||| ||||||||||  ||| | ||||||||||||||||| |||||||||    
T  23713218 ctcacccttaccttaattcaaatgaacaaatgcacaaaaatctggttcacttggctctacttggctcttctc 23713289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 31926466 - 31926395
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| || |||||||  ||| | ||||||||||||||||| |||||||||    
T  31926466 ctcacccttaccttaattcagatgaacaattgcacaaaaatctggttcacttggctctacttggctcttctc 31926395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 302
Target Start/End: Complemental strand, 10811816 - 10811778
Alignment:
Q  264 attatcattgagagatagtctcacccttaccttaattca 302  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  10811816 attattattgagagatagtctcacccttacctgaattca 10811778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 21963983 - 21964060
Alignment:
Q  283 ctcacccttaccttaattcag--aagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||  |||||||||| ||| | |  |||||  ||||| ||||||||||||||||| ||||    
T  21963983 ctcacccttaccttaattcagcaaagaaaaatgtacagcaaaaggattatcttggttctacttgctcttctctacctt 21964060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 23634535 - 23634597
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctacttg 344  Q
    |||||||||||||||||| ||| ||| ||||||||||  ||| | ||||||||||||||||||    
T  23634535 ctcacccttaccttaatttagatgaacaaatgcacaaaaatctggttcacttggctctacttg 23634597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 13227875 - 13227940
Alignment:
Q  233 tatgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctt 296  Q
    |||| |||||||||||||||| |||||||| | || || |||||||| ||||||||||||||||||    
T  13227875 tatgttaaatcaaaatcagaagttatataatctataattattgagagttagtctcacccttacctt 13227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 21239272 - 21239207
Alignment:
Q  72 ttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||||| ||||||| || ||||||||||| |||||| || |||| |||||||| || |||||||    
T  21239272 ttttcatcaacccaaatcctaaatttgatagaaaactctacctatgattattctacaaactgaaca 21239207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Original strand, 21736189 - 21736218
Alignment:
Q  331 cttggctctacttgctcttctctcccttgt 360  Q
    ||||||||||||||||||||||||||||||    
T  21736189 cttggctctacttgctcttctctcccttgt 21736218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 19854057 - 19854112
Alignment:
Q  302 agaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||| ||||||||||||| || | |||| ||| ||||||||||||||||||||||||    
T  19854057 agaaaaaaaatgcacaacaattg-attctcttagctctacttgctcttctctccctt 19854112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 3717 - 3905
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3717 gtttactcgctgtggcgagttgcgacgaacaactctacgggaacagaccagttttcagccgaaaacccaatttttcatccacccaaaccccaaatttgat 3816  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  3817 aggaaactcaacctatgtttattcaacaacctgaacatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 3905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 7309 - 7121
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7309 gtttactcgatgtggtgtgttgcgacgaacaactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 7210  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  7209 aggaaactcaacctatgtttattctacagcctgaacatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 7121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 8414047 - 8413859
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8414047 gtttactcgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 8413948  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  8413947 aggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 8413859  T

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Target: chr8; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 19882706 - 19882889
Alignment:
Q  6 ctcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaa 105  Q
    |||||||||||||||||| ||  ||||| ||||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19882706 ctcgctgtggcgagttgcaacagacaactctacgggaacggaccagtttccagccaaaaagccaatttttcatccacccaaaccccaaatttgataggaa 19882805  T
Q  106 actcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||| ||| |||| |||||||| |||||||||||| ||| |||||||||||   ||||||||||||||||||||| ||| |||||    
T  19882806 acttaacctatgattattctacaacctgaacatcaatttttaacacaatttcgatggtttctacacttttcaattcaaaaatca 19882889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 11775476 - 11775655
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11775476 gtttactcgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgat 11775575  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||| ||| |||| ||||         |||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  11775576 aggaaacttaacctatgattat---------tgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 11775655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 14397205 - 14397031
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||  ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| |||||||  |||||||||||||    
T  14397205 tactcgctgtggcgagttgcgacagacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaa-tccaaatttgatag 14397108  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaat 179  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||||||||||   |||||||||||||||||||||    
T  14397107 gaaactcaacctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaat 14397031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 17795986 - 17796079
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaa 94  Q
    ||||||||||||||||||||||||||  ||||| |||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  17795986 gtttactcgctgtggcgagttgcgacatacaactctacggaaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaa 17796079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 22617542 - 22617684
Alignment:
Q  153 attgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatcaaaatcag 251  Q
    |||| ||||||||||||||| || ||| ||| ||||| | ||  ||||||||||||||||||||||||||||||||||||  | |||||| |||||||||    
T  22617542 attgccatggtttctacactctttaattcaaaaatcaaaatc--aaaacctaacccccaattcccaatttcaactagaacccttgctaaaccaaaatcag 22617639  T
Q  252 aattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    || |||| ||| |||||||||||||| ||||||||||||||||||    
T  22617640 aagtatacaactattatcattgagagttagtctcacccttacctt 22617684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 25657814 - 25657668
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||||||||||||||||||||| ||||   |||| ||||| |||| ||||||  | |||| ||    ||||||| ||||||| ||||||||||||    
T  25657814 gtttactcgctgtggcgagttgcgacggacaaatttacgagaacagaccatttttcactctaaaagccccaatttcatcaacccaaatcccaaatttgat 25657715  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||||| ||||||||||||| | |||||||||| |||||||    
T  25657714 aggaaactcaacctatgtttattctacagcctgaacatcaattctta 25657668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 16198591 - 16198734
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    ||||||||||||||||||||| || ||||  ||||||||| | |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  16198591 tactcgctgtggcgagttgcggcggacaaatctacgggaatagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 16198689  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||    
T  16198690 gaaactcaacctatgtttattctacagcctgaacttcaattctta 16198734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 25483652 - 25483552
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatc 188  Q
    |||||||||||||||||||| ||| |||| |||||||| ||||| |||||| |||||||||||||||   ||||||||||||||||||||| ||| ||||    
T  25483652 cccaaatttgataggaaacttaacctatgattattctacaacctaaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatc 25483553  T
Q  189 a 189  Q
    |    
T  25483552 a 25483552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 23661140 - 23661225
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  23661140 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 23661225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 20455831 - 20455915
Alignment:
Q  92 aaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    ||||||| ||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  20455831 aaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 23478834 - 23478980
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||| || ||||||||||||| ||||  ||||||||||| |||| ||||||  || ||| ||| | ||| |||| ||||||| || ||||||||    
T  23478834 gtttactcgcagtagcgagttgcgacggacaaatctacgggaacagaccatttttcactcctaaagccccaattt-catcaacccaaatcctaaatttga 23478932  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  23478933 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 23478980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 17460416 - 17460331
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| | ||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  17460416 caaatttgtttggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 17460331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19880582 - 19880721
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  |||||||       | |||||||||||    
T  19880582 gtttactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatc-------aacccaaatttga 19880673  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  19880674 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 19880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 20463042 - 20463123
Alignment:
Q  95 tttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||| ||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  20463042 tttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20463123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 20258161 - 20258085
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaa-tgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||| |||||||||| |||||  |||| |||||| ||||||||||||||||||||||||||||    
T  20258161 ctcacccttaccttaatttagaagaaaaaatgcaccgcgattggattctcttggctctacttgctcttctctccctt 20258085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 21044791 - 21044715
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaa-tgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||| |||||||||| |||||  |||| |||||| ||||||||||||||||||||||||||||    
T  21044791 ctcacccttaccttaatttagaagaaaaaatgcaccgcgattggattctcttggctctacttgctcttctctccctt 21044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 297
Target Start/End: Original strand, 20387386 - 20387536
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaacta--tgctaaatc 243  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||    |  ||||||||| ||| ||||||||| || ||| |||||    |||||||||    
T  20387386 taacactattgtcatggtttctacacttttcaattcaaaaatcaataac--aaaacctaatccc-aattcccaaatttaaccagaaccccttgctaaatc 20387482  T
Q  244 aaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||| |||||| |  |||||||| ||| |||||||||||||||    
T  20387483 aaaatcagaattatacaaccataactattgagagttagcctcacccttacctta 20387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 20460809 - 20460888
Alignment:
Q  92 aaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    ||||||| ||||||||| ||| |||| |||||||| |||||||||||| |||||||||||||||  ||||||||||||||    
T  20460809 aaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacac 20460888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 18614300 - 18614388
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgt 360  Q
    ||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||| | || ||||||||| ||||||| |||||||    
T  18614300 attgagagatagtctcacccttaccttaatttagaag-aaaacgcacaatgatcggattctc-tgactctacttgttcttctcacccttgt 18614388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 19860534 - 19860611
Alignment:
Q  283 ctcacccttaccttaattcagaag-aaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| |||||||| |||| || ||| |||||||||||||||||||||| |||||||||    
T  19860534 ctcacccttaccttaattcagaaggaaaaatgctcaacaattcgggttcacttggctctacttgctctactctccctt 19860611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 22610531 - 22610431
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctga 134  Q
    ||||||||| | ||| |||||||||||||||||||||||| || ||||||||| || |||||  | |||||||||||| ||||||||||||| || ||||    
T  22610531 ctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccacccaaatccaaaattcaaaaggaaactcaacctatgtttattctacaatctga 22610433  T
Q  135 ac 136  Q
    ||    
T  22610432 ac 22610431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 35541975 - 35542051
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| |||||||||||||| || | |||| || || ||||||||||||||||||||||    
T  35541975 ctcacccttaccttaattcagaatgaaaaatgcacaacaattgaattctctgggttctacttgctcttctctccctt 35542051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 20455095 - 20455174
Alignment:
Q  92 aaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    ||||||| ||||| ||| ||| |||| |||||||| |||||||||||| |||||||||||||||  ||||||||||||||    
T  20455095 aaatttgttaggacacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacac 20455174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 39364942 - 39364988
Alignment:
Q  264 attatcattgagagatagtctcacccttaccttaattcagaagaaaa 310  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  39364942 attattattgagagatagtctcacccttaccttaattcagaagaaaa 39364988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 364852 - 364920
Alignment:
Q  235 tgctaaatcaaaatcagaattatataacc-attatcattgagagatagtctcacccttaccttaattca 302  Q
    |||||||||||||||||||||||| || | || ||||||||||| ||||||||||||||||| ||||||    
T  364852 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagtctcacccttacctgaattca 364920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 22483620 - 22483678
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||  |||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  22483620 cccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattctta 22483678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 26454465 - 26454593
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||| ||||| ||||  ||||||||||| ||||| |||||  |||||| ||| | ||| |||| |||||       |||||||    
T  26454465 gtttactcgctgtggcgagttacgacggacaaatctacgggaacagaccagatttcactccaaaagccccaattt-catcaaccca-------aatttga 26454556  T
Q  100 taggaaactcaacatatgtttattctataacctgaac 136  Q
    ||||||||||||| ||||||||||||| | |||||||    
T  26454557 taggaaactcaacctatgtttattctacagcctgaac 26454593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 329
Target Start/End: Complemental strand, 23482080 - 23482020
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattc 329  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||| ||||||| |||||||||    
T  23482080 attgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattc 23482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 23883973 - 23884056
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaac 136  Q
    ||||||||||||||||||||||  || ||||||||| | ||||||  | |||||||||||| ||||||||||||| || ||||||    
T  23883973 ttttcagccaaaaacccaatttg-caaccacccaaatcgcaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 23884056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 21685234 - 21685163
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||||||||||| |||||||||    
T  21685234 ctcacccttaccttaattcagatgaacaaatgcacaacaatctggttcccttggctctacttggctcttctc 21685163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 21689583 - 21689512
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||||||||||| |||||||||    
T  21689583 ctcacccttaccttaattcagatgaacaaatgcacaacaatctggttcccttggctctacttggctcttctc 21689512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 43113015 - 43113078
Alignment:
Q  235 tgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttaccttaa 298  Q
    ||||||| || ||||||||||||| ||| || ||||||||||| ||| ||||||||||||||||    
T  43113015 tgctaaaacataatcagaattataaaactataatcattgagagttagcctcacccttaccttaa 43113078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 20494413 - 20494351
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| ||||||||||||||    
T  20494413 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctt 20494351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 21860600 - 21860535
Alignment:
Q  233 tatgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctt 296  Q
    |||| |||||||||||||||| |||||||| | || ||||||||||| ||||||||||||||||||    
T  21860600 tatgttaaatcaaaatcagaagttatataatctataatcattgagagttagtctcacccttacctt 21860535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 36444913 - 36444837
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| || |||||| || | || ||| ||| ||||||||||||||||||||||||||||    
T  36444913 ctcacccttaccttaattcagaaagacaaatgcgcagcaattcgggttc-cttggctctacttgctcttctctccctt 36444837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 38184762 - 38184689
Alignment:
Q  233 tatgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttaccttaattcaga 304  Q
    |||| |||||||||||||||| ||||||||   || || |||||||| ||||||||||||||||||||||||||    
T  38184762 tatgttaaatcaaaatcagaagttatataatttataattattgagagttagtctcacccttaccttaattcaga 38184689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 21931722 - 21931766
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaaaaa 311  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||    
T  21931722 atcattgagagttagcctcacccttaccttaattcagatgaaaaa 21931766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 22433678 - 22433615
Alignment:
Q  235 tgctaaatcaaaatcagaattatata-accattatcattgagagatagtctcacccttacctta 297  Q
    ||||||| |||||||||||||||| | || || ||||||||||| ||| |||||||||||||||    
T  22433678 tgctaaaacaaaatcagaattatacagactataatcattgagagttagcctcacccttacctta 22433615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 42559518 - 42559455
Alignment:
Q  235 tgctaaatcaaaatcagaattatataacc-attatcattgagagatagtctcacccttacctta 297  Q
    |||||||||||||||| ||||||| || | || ||||||||||| ||| |||||||||||||||    
T  42559518 tgctaaatcaaaatcataattatacaaactataatcattgagagttagcctcacccttacctta 42559455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 19987346 - 19987270
Alignment:
Q  283 ctcacccttaccttaattcagaagaaa--aatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||| ||  | |||||  |||||||||| || | |||| ||||||||||||||||||||||||||||    
T  19987346 ctcacccttaccttagttttgcagaaagaaatgcacaacaattg-attctcttggctctacttgctcttctctccctt 19987270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 20773233 - 20773176
Alignment:
Q  283 ctcacccttaccttaattcagaag--aaaaatgcacaacgatcggattcacttggctc 338  Q
    ||||||||||||||||||||||||  ||||||||||| | || |||||| ||||||||    
T  20773233 ctcacccttaccttaattcagaaggaaaaaatgcacagcaattggattctcttggctc 20773176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 20783027 - 20782970
Alignment:
Q  283 ctcacccttaccttaattcagaag--aaaaatgcacaacgatcggattcacttggctc 338  Q
    ||||||||||||||||||||||||  ||||||||||| | || |||||| ||||||||    
T  20783027 ctcacccttaccttaattcagaaggaaaaaatgcacagcaattggattctcttggctc 20782970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 21682852 - 21682790
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctacttg 344  Q
    ||||||||||||||||||  || ||| ||||||||||| || |||||| ||||||||||||||    
T  21682852 ctcacccttaccttaatttggatgaacaaatgcacaacaataggattcccttggctctacttg 21682790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 28854816 - 28854874
Alignment:
Q  246 aatcagaattatataaccattatcattgagagatagtctcacccttaccttaattcaga 304  Q
    ||||||||||||||||| |  |||||||  || ||| ||||||||||||||||||||||    
T  28854816 aatcagaattatataactaaaatcattgcaagttagcctcacccttaccttaattcaga 28854874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 14056597 - 14056564
Alignment:
Q  264 attatcattgagagatagtctcacccttacctta 297  Q
    ||||| ||||||||||||||||||||||||||||    
T  14056597 attattattgagagatagtctcacccttacctta 14056564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 21299411 - 21299350
Alignment:
Q  197 aaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 258  Q
    ||||||||  ||| ||||||||||||| || ||||||| | |||| ||||||||||||||||    
T  21299411 aaaacctagacccaaattcccaatttctaccagaactaggttaaaccaaaatcagaattata 21299350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 25111998 - 25112031
Alignment:
Q  264 attatcattgagagatagtctcacccttacctta 297  Q
    ||||| ||||||||||||||||||||||||||||    
T  25111998 attattattgagagatagtctcacccttacctta 25112031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 21669832 - 21669860
Alignment:
Q  330 acttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||    
T  21669832 acttggctctacttgctcttctctccctt 21669860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 27364275 - 27364347
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcactt-ggctctacttgctcttctct 353  Q
    ||||||||||||||||||||||| |||||||||||| | |  |||||| ||| || ||||||||| |||||||    
T  27364275 ctcacccttaccttaattcagaatgaaaaatgcacagcaaatggattctcttgggttctacttgcgcttctct 27364347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 29643413 - 29643373
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaaaa 310  Q
    ||||| ||||| ||||||||||||||||||| |||||||||    
T  29643413 attgaaagataatctcacccttaccttaatttagaagaaaa 29643373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 36732733 - 36732649
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaac 136  Q
    |||||| ||||||| || |  |||| || ||||||| ||||||||||||||||||||  || |||| |||||||| || ||||||    
T  36732733 ttttcacccaaaaaacccaaatttcgtctacccaaatcccaaatttgataggaaacttgacctatgattattctacaatctgaac 36732649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 120; Significance: 3e-61; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 169194 - 169381
Alignment:
Q  2 tttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgata 101  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  169194 tttacttgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgata 169293  T
Q  102 ggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||||||| ||| |||| |||||||| ||||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  169294 ggaaacttaacctatgattattctacaacctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 169381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 176547 - 176734
Alignment:
Q  2 tttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgata 101  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  176547 tttacttgctgtggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgata 176646  T
Q  102 ggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||||||| ||| |||| |||||||| ||||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  176647 ggaaacttaacctatgattattctacaacctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 176734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 179965 - 180030
Alignment:
Q  283 ctcacccttaccttaattcagaag-aaaaatgcacaacga-tcggattcacttggctctacttgct 346  Q
    |||||||||||||||||||||||| | ||||||||||| | |||||||| ||||| ||||||||||    
T  179965 ctcacccttaccttaattcagaagcacaaatgcacaacaattcggattcccttggttctacttgct 180030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 385070 - 385208
Alignment:
Q  159 atggtttctacac-ttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattat 257  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  385070 atggtctctacaccttttcaatccaaaaatcatactccaaaaacctaatccccaattcccaatttcaactagaactatgctaaaccaaaatcagaattat 385169  T
Q  258 ataaccattatcattgagagatagtctcacccttacctt 296  Q
    |||||||||||||||||||||||||||||||||||||||    
T  385170 ataaccattatcattgagagatagtctcacccttacctt 385208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 116924 - 116982
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattc 329  Q
    ||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||    
T  116924 attgagagatagtctcacccttaccttaatttagaag-aaaacacacaacgatcggattc 116982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 66349 - 66243
Alignment:
Q  30 caaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctata 128  Q
    |||| ||||| ||||| |||||||||||  |||||| ||| |  ||||||| || |||| ||||||||||||| ||||||| || |||| |||||||| |    
T  66349 caactctacgagaacagaccagttttcactccaaaatcccca-atttcatcaactcaaatcccaaatttgata-gaaactctacctatgattattctaca 66252  T
Q  129 acctgaaca 137  Q
    |||||||||    
T  66251 acctgaaca 66243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14886 - 14740
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  14886 gtttactcgttgtggcgagttgcgacgaacaactctacgggaacagacctattatcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 14787  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||||| ||||||||||||| ||||||||| || |||||||    
T  14786 aggaaactcaacctatgtttattctacaacctgaacttcaattctta 14740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 23944 - 23798
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  23944 gtttactcgttgtggcgagttgcgacgaacaactctacgggaacagacctattatcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 23845  T
Q  101 aggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||||| ||||||||||||| ||||||||| || |||||||    
T  23844 aggaaactcaacctatgtttattctacaacctgaacttcaattctta 23798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 18350 - 18535
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| | ||  ||||||||||| | |||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  18350 tactcgctgtggcgagttgcgacggaaaaatctacgggaacagatcagttttcactccaaaagcccca-ctttcatcaacccaaatcccaaatttgatag 18448  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| ||||||||||||| | ||||||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  18449 gaaactcaacctatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 18535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 277
Target Start/End: Original strand, 8932 - 9119
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatc 188  Q
    |||||||||||||||||||| |||||||| |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| |  ||| | |     
T  8932 cccaaatttgataggaaacttaacatatgattattctacaacctgaacatcaattcttaacacaattgccatggtttctacacttttctaatcaaaatta 9031  T
Q  189 atactccaaaaacctaacccccaattcccaatttcaactagaa--ctatgctaaatcaaaatcagaattatataaccattatcattgagag 277  Q
    ||| ||  |||||||||  |||||||||||| || ||| ||||  |  |||||||||||||||||||||||| ||| || |||||||||||    
T  9032 ataatc--aaaacctaa-tcccaattcccaaatttaaccagaaccccttgctaaatcaaaatcagaattatacaactataatcattgagag 9119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 17602 - 17521
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctt 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  17602 ctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcccttggctctacttcctcttctctcccttgtcctt 17521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 267 - 366
Target Start/End: Complemental strand, 79122 - 79023
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgtcctttg 366  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| |||||    
T  79122 atcattgagagttagcctcacccttaccttaatttagaagaaaaacgcacaacgatcggattctctcggctctacttgctcttctctcccttgttctttg 79023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 174335 - 174232
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacact 172  Q
    ||||||| ||||||| | |||||||||||||||||| |||||||| |||||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  174335 tttcatctacccaaatctcaaatttgataggaaacttaacatatgattattctacaacctgaccatcaattcttaacacaattgtcatggtttctacact 174236  T
Q  173 tttc 176  Q
    ||||    
T  174235 tttc 174232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 182192 - 182049
Alignment:
Q  153 attgtcatggtttctacacttttcaatccaagaa-tcatactccaaaaacctaacccccaattcccaatttcaactagaac-tatgctaaatcaaaatca 250  Q
    |||| ||||| |||||||||||| ||| ||| || ||||| ||  ||||||||||||||| |||||||||||||||||||| | ||||||| ||||||||    
T  182192 attgccatggattctacactttttaattcaaaaaatcataatc--aaaacctaacccccacttcccaatttcaactagaacctttgctaaaccaaaatca 182095  T
Q  251 gaattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||| |||| ||| |||||||||||||| ||||||||||||||||||    
T  182094 gaagtatacaactattatcattgagagttagtctcacccttacctt 182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 31900 - 32084
Alignment:
Q  4 tactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatag 102  Q
    |||||||||||||||||||||||| ||||  ||||||||||| |||| | ||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||    
T  31900 tactcgctgtggcgagttgcgacggacaaatctacgggaacagaccaatattcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatag 31998  T
Q  103 gaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    |||||||||| |||| |||||||| | ||||||| || | |||||||||||||   ||||||||||||||||||||| ||| |||||    
T  31999 gaaactcaacctatg-ttattctacagcctgaacttcaactcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 32084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18942 - 18826
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    |||||||||||||||| ||||| |||  ||||| ||||| ||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||||    
T  18942 gtttactcgctgtggctagttgtgacagacaactctacgagaacagaccagttttcagccaaaaaccaaaattttcatccacccaaaccacaaatttgat 18843  T
Q  101 aggaaactcaacatatg 117  Q
    |||||||| ||| ||||    
T  18842 aggaaacttaacctatg 18826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 31580 - 31449
Alignment:
Q  164 ttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatcaaaatcagaattatataac 262  Q
    ||||||||| || ||| ||| ||||||| ||  ||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||| |||| |||    
T  31580 ttctacactctttaattcaaaaatcataatc--aaaacctaacccccaattcccaatttcaactagaacccttgctaaaccaaaatcagaagtatacaac 31483  T
Q  263 cattatcattgagagatagtctcacccttacctt 296  Q
     |||||||||||||| ||||||||||||||||||    
T  31482 tattatcattgagagttagtctcacccttacctt 31449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 29511 - 29370
Alignment:
Q  6 ctcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatagga 104  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||| ||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||    
T  29511 ctcgctgtggcgagttgcgacgaacaaatctacgggaacagaccagtttgcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatagga 29413  T
Q  105 aactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||| ||||||||||||| | ||||||| || |||||||    
T  29412 aactcaacctatgtttattctacagcctgaacttcaattctta 29370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 72 - 297
Target Start/End: Original strand, 964 - 1190
Alignment:
Q  72 ttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacac 171  Q
    |||||| | ||||||| |||||||||||||||||||| ||| |||| |||| ||| |||||||||||| | |||||||||||||   |||||||||||||    
T  964 ttttcaccaacccaaatcccaaatttgataggaaacttaacctatgattatcctacaacctgaacatcaactcttaacacaatttctatggtttctacac 1063  T
Q  172 ttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaa--ctatgctaaatcaaaatcagaattata-taaccattat 268  Q
    |||||||| ||| ||||| |   | |||||||||  |||||||||||| || ||| | ||  |  |||||||||||||||||||| |||  ||| || ||    
T  1064 ttttcaattcaaaaatcaaaaatc-aaaacctaa-tcccaattcccaaatttaaccacaaccccttgctaaatcaaaatcagaatcatacaaactataat 1161  T
Q  269 cattgagagatagtctcacccttacctta 297  Q
    ||||||||| ||| |||||||||||||||    
T  1162 cattgagagttagcctcacccttacctta 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 40060 - 39923
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacac 151  Q
    |||||| ||||||| || |  ||||||| ||||||| ||||| |||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||    
T  40060 ttttcacccaaaaaacccaaatttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacac 39961  T
Q  152 aattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||||   ||||||||||||||||||||| ||| |||||    
T  39960 aatttcgatggtttctacacttttcaattcaaaaatca 39923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6212 - 6268
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca 57  Q
    ||||||||||||||||||||||||||  ||||| |||||| || | |||||||||||    
T  6212 gtttactcgctgtggcgagttgcgacagacaactctacggaaatagaccagttttca 6268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 300
Target Start/End: Original strand, 1419 - 1523
Alignment:
Q  197 aaaacctaacccccaattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataaccattatcattgagagatagtctcacccttacct 295  Q
    |||| |||| ||| ||||||||||||| |||||||||||| |||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  1419 aaaatctaaacccaaattcccaatttctactagaactatgttaaacccaaaatcagaataacataaccattatcattgagagatagtctcacccttacct 1518  T
Q  296 taatt 300  Q
    |||||    
T  1519 taatt 1523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13700 - 13816
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgat 100  Q
    ||||| ||| ||||| ||||||||||  |||||  |||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  13700 gtttaatcgttgtggggagttgcgacagacaactttacgggaacagaccagttttcagcgaaaaaccttatttttcatccacccaaaccccaaatttgat 13799  T
Q  101 aggaaactcaacatatg 117  Q
    |||||||| ||| ||||    
T  13800 aggaaacttaacctatg 13816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 8887 - 8951
Alignment:
Q  11 tgtggcgagttgcgacgaacaaccctacgggaacataccagttttcagccaaaaacccaattttt 75  Q
    |||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8887 tgtggcgacttgcgacaaacaactctacgggaacagaccagttttcagccaaaaacccaattttt 8951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 10975 - 11121
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||| |||| ||||||  |||||| ||| |  ||||||| ||| ||| |||||||||||    
T  10975 gtttactcgctgtggcgagttgcgacggacaaatctacgggaacagaccaattttcactccaaaagcccca-atttcatcaaccaaaatcccaaatttga 11073  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||||| |||||||||||||| | ||||||| || |||||||    
T  11074 taggaaactcaagatatgtttattctacagcctgaacttcaattctta 11121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 1094 - 1156
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaa 135  Q
    ||||||| ||||||| || ||||||||||||||||| || ||||| |||||||| ||||||||    
T  1094 tttcatctacccaaatccaaaatttgataggaaacttaatatatgattattctacaacctgaa 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 6600 - 6662
Alignment:
Q  73 tttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaa 135  Q
    ||||||| ||||||| || ||||||||||||||||| || ||||| |||||||| ||||||||    
T  6600 tttcatctacccaaatccaaaatttgataggaaacttaatatatgattattctacaacctgaa 6662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 189
Target Start/End: Complemental strand, 19564 - 19410
Alignment:
Q  35 ctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctg 133  Q
    ||||||||||| |||||||||||  |||||| ||| | ||| |||| || || | |||||||||||||||||||||||| ||||||||||||| | ||||    
T  19564 ctacgggaacagaccagttttcactccaaaagccccaattt-catcaactcatatcccaaatttgataggaaactcaacttatgtttattctacagcctg 19466  T
Q  134 aacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||| || |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  19465 aacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 19410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1689 - 1835
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||||||||||||| |||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| || ||||||||    
T  1689 gtttactcgctgtggcgagtggcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatccaaaatttga 1787  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  1788 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 42153 - 42225
Alignment:
Q  104 aaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    ||||| ||| |||| |||||||| ||| |||||||| |||||||||||||||  |||||||||||||||||||    
T  42153 aaacttaacctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 42225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 2305 - 2219
Alignment:
Q  90 ccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    ||||||||||||||||||| ||| | || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2305 ccaaatttgataggaaacttaacctgtgattattctacaacctgaacatcaattcttaacacaattgtcatggtttctacacttttc 2219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 9899 - 10025
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacac 151  Q
    |||||| ||||||| || |  ||||||| ||||||| ||||| |||||||||||||| ||| |||| |||||||| |||||||||||| |||||||||||    
T  9899 ttttcacccaaaaaacccaaatttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacac 9998  T
Q  152 aattgtcatggtttctacacttttcaa 178  Q
    ||||   ||||||||||||||||||||    
T  9999 aatttcgatggtttctacacttttcaa 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 360
Target Start/End: Complemental strand, 15027 - 14936
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgt 360  Q
    ||||||||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  15027 atcattgagagttagtctcacccttaccttaatt-agaagaaaac-gcacaacgatcggattcccttggctctacttgttcttctctcccttgt 14936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 26935 - 26968
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  26935 gattctcttggctctacttgctcttctctccctt 26968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 146 - 296
Target Start/End: Original strand, 189630 - 189779
Alignment:
Q  146 taacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat-gctaaatca 244  Q
    |||||| |||| |||||||| |||||| |||||| ||| ||||||| ||  ||||||||||||||| || |||| ||||||||||||  | | |||||||    
T  189630 taacaccattgccatggtttgtacactcttcaattcaaaaatcataatc--aaaacctaacccccattttccaaattcaactagaacccttgttaaatca 189727  T
Q  245 aaatcagaattatataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||| |||| ||| |||||||||||||| | ||||||||||||||||    
T  189728 aaatcagaagtatagaactattatcattgagagttggtctcacccttacctt 189779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 6781 - 6668
Alignment:
Q  24 gacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttatt 123  Q
    |||||||||| ||||| ||| | |||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||| || |||| ||| |    
T  6781 gacgaacaactctacgagaagaaaccagttttcagccaaaaactcaatttttcaaccacccaaatcccaaatttgatagaaaactctacttatgattact 6682  T
Q  124 ctataacctgaaca 137  Q
    ||| ||| ||||||    
T  6681 ctacaacatgaaca 6668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 1929 - 2066
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacac 151  Q
    |||||| ||||||| || |  ||||||  ||||||| |||||||||||||||||||| ||| || | |||||||| ||||| |||||| |||||||||||    
T  1929 ttttcatccaaaaaacccaaatttcatatacccaaatcccaaatttgataggaaacttaacctacgattattctacaacctaaacatcaattcttaacac 2028  T
Q  152 aattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||||  ||| |||||||||||||||||| ||| |||||    
T  2029 aattagcatagtttctacacttttcaattcaaaaatca 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 9462 - 9537
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||||||||||||||| | | |||| ||  ||||||||||||||||||||||||||||    
T  9462 ctcacccttaccttaattcagaagaaaaatgcacagcaattcgggtt-gcttggctctacttgctcttctctccctt 9537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 2109 - 2169
Alignment:
Q  238 taaatcaaaatcagaattatataaccattat-cattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||| || |  ||| ||||||||| ||| |||||||||||||||    
T  2109 taaatcaaaatcagaattatacaaactatattcattgagagctagcctcacccttacctta 2169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 8616 - 8729
Alignment:
Q  24 gacgaacaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttatt 123  Q
    |||||||| | ||||||||| | || |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||| || |||| ||| |    
T  8616 gacgaacagctctacgggaagaaactagttttcagccaaaaacccaatttttcaaccacccaaatcccaaatttgatagaaaactctacctatgattact 8715  T
Q  124 ctataacctgaaca 137  Q
    ||  ||||||||||    
T  8716 ctgcaacctgaaca 8729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 139
Target Start/End: Complemental strand, 5881 - 5778
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctga 134  Q
    ||||||||| | ||||||||||||||||||||| |||||| || ||||||||| ||||||||  || ||||||||||| ||||||||||||| |||||||    
T  5881 ctacgggaagaaaccagttttcagccaaaaacctaatttt-caaccacccaaatcccaaattcaatgggaaactcaacctatgtttattctacaacctga 5783  T
Q  135 acatc 139  Q
    |||||    
T  5782 acatc 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 42438 - 42613
Alignment:
Q  14 ggcgagttgcgacgaacaaccctacgggaacataccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaac 112  Q
    |||||||||||||| ||||  | ||||||||| |||||||||||  |||||| ||| | ||| |||| | | |||  |||||||||||||||||||||||    
T  42438 ggcgagttgcgacggacaaatcaacgggaacagaccagttttcactccaaaagccccaattt-catcaaacaaaattccaaatttgataggaaactcaac 42536  T
Q  113 atatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
     || |||||||||| | ||||||| || ||||||||||| |||   ||||||||||||||||||||| ||| |||||    
T  42537 ctaggtttattctacagcctgaacttcaattcttaacactatttcaatggtttctacacttttcaattcaaaaatca 42613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 22043 - 21931
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctga 134  Q
    |||||||||||| ||||||||||  |||||| ||    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| | |||||    
T  22043 ctacgggaacatgccagttttcactcaaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctga 21944  T
Q  135 acatcgattctta 147  Q
    ||||| |||||||    
T  21943 acatcaattctta 21931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 71510 - 71555
Alignment:
Q  211 aattcccaatttcaactagaactatgctaaatcaaaatcagaatta 256  Q
    |||||||||||| ||| ||||||||| |||| ||||||||||||||    
T  71510 aattcccaattttaaccagaactatgttaaaccaaaatcagaatta 71555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 8005 - 8092
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  8005 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaaaacaattgccatgatttctacacttttc 8092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 8155 - 8219
Alignment:
Q  238 taaatcaaaatcagaattatataacc-attatcattgagagatagtctcacccttaccttaattc 301  Q
    |||||||| |||||||||||| || | || ||||||||||| ||||||||||||||| |||||||    
T  8155 taaatcaagatcagaattatacaaactataatcattgagagttagtctcacccttactttaattc 8219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 52290 - 52365
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  52290 ctcacccttaccttaatttagacgaaaagtgcacaacgatcggattcgcttggctctacttgctcttcactccctt 52365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 72278 - 72365
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||| ||||| ||| |||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  72278 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 72365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 70140 - 70007
Alignment:
Q  14 ggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaac 112  Q
    |||||||||||||| ||||  ||||||||||  |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||    
T  70140 ggcgagttgcgacggacaaatctacgggaactgaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaac 70042  T
Q  113 atatgtttattctataacctgaacatcgattctta 147  Q
     ||| ||| ||||| | ||||||| || |||||||    
T  70041 ctattttttttctacagcctgaacttcaattctta 70007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 21817 - 21911
Alignment:
Q  81 acccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacactttt 175  Q
    ||||||| ||||||||||||||||| || ||  |||| |||||||| |||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  21817 acccaaatcccaaatttgataggaagcttaatctatgattattctacaacctgaacatcaattgttaacacaattgccatggtttctacactttt 21911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 45923 - 45847
Alignment:
Q  283 ctcacccttaccttaattcagaagaaa--aatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||| ||  | |||||  |||||||||| || | |||| ||||||||||||||||||||||||||||    
T  45923 ctcacccttaccttacttttgcagaaagaaatgcacaacaattg-attctcttggctctacttgctcttctctccctt 45847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 50196 - 50120
Alignment:
Q  283 ctcacccttaccttaattcagaagaaa--aatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||| ||  | |||||  |||||||||| || | |||| ||||||||||||||||||||||||||||    
T  50196 ctcacccttaccttacttttgcagaaagaaatgcacaacaattg-attctcttggctctacttgctcttctctccctt 50120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 267 - 360
Target Start/End: Original strand, 69771 - 69863
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgt 360  Q
    |||||||| || |||||||||||||||||||||| |||||||||  || ||||||||| |||| |||||||||||||| |||||||||||||||    
T  69771 atcattgaaagttagtctcacccttaccttaatttagaagaaaac-gcgcaacgatcgaattctcttggctctacttgttcttctctcccttgt 69863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 39361 - 39258
Alignment:
Q  35 ctacgggaacataccagtttt-cagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctg 133  Q
    ||||||||||| ||||||||| ||||||||||||||||||| || ||||||||| ||||||||  |||||||| ||||| |||||||| |||| ||||||    
T  39361 ctacgggaacagaccagtttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaattcaacctatgtttaatctacaacctg 39263  T
Q  134 aacat 138  Q
    |||||    
T  39262 aacat 39258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 44035 - 43949
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatc 139  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||  |||||||||||||| ||||||||||||| ||||| ||||||    
T  44035 ttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaacctaaacatc 43949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 1547 - 1622
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||||||||||||||| | | |||| ||| ||||||||||||||||||||||||||||    
T  1547 ctcacccttaccttaattcagaagaaaaatgcacagcaattcgggttc-cttggctctacttgctcttctctccctt 1622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 11427 - 11498
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgat-cggattcacttggctctacttgctcttctc 352  Q
    |||||||||||||||| | |||| |||||||||||| | || | | ||||||||||||||||||||||||||    
T  11427 ctcacccttaccttaagttagaatgaaaaatgcacatcaattcaggttcacttggctctacttgctcttctc 11498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 917 - 1004
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||| ||||| ||| |||| |||||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  917 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattatcatgatttctacacttttc 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 5421 - 5508
Alignment:
Q  211 aattcccaatttcaactagaactatgctaaatc-aaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 297  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||| ||||| ||||||  ||||| ||||||||||||||||||||||    
T  5421 aattcccaattttaaccagaactatgctaaatccaaaatcagaatcatatacccattactattgaaagatagtctcacccttacctta 5508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 8712 - 8858
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||||| | |||||||||||| ||||  ||| ||||||| |||||||||||  |||||| ||| |  ||||||| || |||| | |||||||||    
T  8712 gtttactcgctgggtcgagttgcgacggacaaatctatgggaacaaaccagttttcactccaaaagcccca-atttcatcaactcaaatctcaaatttga 8810  T
Q  100 taggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||||||| ||||||||||||| | ||||||| || |||||||    
T  8811 taggaaactcaacctatgtttattctacagcctgaacttcaattctta 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 20870 - 20995
Alignment:
Q  22 gcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgttt 120  Q
    |||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  20870 gcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgttt 20968  T
Q  121 attctataacctgaacatcgattctta 147  Q
    |||||| | ||||||| || |||||||    
T  20969 attctacagcctgaacttcaattctta 20995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33865 - 33989
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    |||||||||||||||| |||||||||| ||||  ||| ||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| | ||||||||     
T  33865 gtttactcgctgtggctagttgcgacggacaaatctatgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatctcaaatttg- 33962  T
Q  100 taggaaactcaacatatgtttattcta 126  Q
    ||||||||||||| |||||||||||||    
T  33963 taggaaactcaacctatgtttattcta 33989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 2236 - 2151
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||||||| ||| |||| |||||||| ||||||||||||  ||||||||||||||  |||||||||||||||||||    
T  2236 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcagttcttaacacaattaccatggtttctacacttttc 2151  T

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Target: scaffold0290 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 916 - 1001
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||||||| ||| |||| |||||||| |||||||||||| | |||||||||||||  |||||||||||||||||||    
T  916 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaactcttaacacaattaccatggtttctacacttttc 1001  T

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Target: scaffold0125 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 1259 - 1174
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| ||||||||| ||| |||| |||||||| |||||||||||| ||| |||||||||||  |||||||||||||||||||    
T  1259 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaatttttaacacaattaccatggtttctacacttttc 1174  T

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Target: scaffold0751 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 1418 - 1494
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacgatcgga-ttcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||| |||||||||| | |||  | ||||||||||||||||||||||||||||||||    
T  1418 ctcacccttaccttaattcagaaggaaaatgcacagcaatccaagttcacttggctctacttgctcttctctccctt 1494  T

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Target: scaffold0301 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 4225 - 4300
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||||||||||||||||  | |||| ||| ||||||||||||||||||||||||||||    
T  4225 ctcacccttaccttaattcagaagaaaaatgcacaataattcgggttc-cttggctctacttgctcttctctccctt 4300  T

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Target: scaffold0113 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 26790 - 26715
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||||||||||||||| | | |||| ||| ||||||||||||||||||||||||||||    
T  26790 ctcacccttaccttaattcagaagaaaaatgcacagcaattcgggttc-cttggctctacttgctcttctctccctt 26715  T

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Target: scaffold0113; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 35319 - 35390
Alignment:
Q  76 catccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||| ||| ||| ||||||||  |||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  35319 catcaacctaaatcccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattctta 35390  T

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Target: scaffold0394 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 12891 - 12978
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||||| ||| ||||| ||| |||| |||||||| ||| |||||||| |||||||||||||||  |||||||||||||||||||    
T  12891 cccaaatttgttagaaaacttaacctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 12978  T

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Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 121928 - 122015
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    ||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||| ||| | ||||||||||||||||| |||||||||    
T  121928 atcattgagagttagcctcacccttaccttaattcagatgaacaaatgcacaacaatctggttcacttggctctacttggctcttctc 122015  T

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Target: scaffold0031; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 352
Target Start/End: Original strand, 132804 - 132891
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    ||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||| ||| | ||||||||||||||||| |||||||||    
T  132804 atcattgagagttagcctcacccttaccttaattcagatgaacaaatgcacaacaatctggttcacttggctctacttggctcttctc 132891  T

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Target: scaffold0031; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 127610 - 127520
Alignment:
Q  35 ctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattcta 126  Q
    ||||||||| | ||| |||||||||||||||||||| |||||| ||||| ||| ||||||||  | |||||||||||| |||||||||||||    
T  127610 ctacgggaagaaacctgttttcagccaaaaacccaa-ttttcaaccaccaaaatcccaaattcaaaaggaaactcaacctatgtttattcta 127520  T

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Target: scaffold0037 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 82839 - 82920
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctaca 170  Q
    |||||||||| ||| ||||| ||| |||| |||||||| ||| |||||||| ||||||||||||||| ||||||||||||||    
T  82839 cccaaatttgttagaaaacttaacgtatgattattctacaacttgaacatcaattcttaacacaattatcatggtttctaca 82920  T

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Target: scaffold0037; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 45348 - 45421
Alignment:
Q  284 tcacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||||||| | | |||| ||  ||||||||||||||||||||||||||||    
T  45348 tcacccttaccttaattcagaagaaaaatgcacagcaattcgggtt--cttggctctacttgctcttctctccctt 45421  T

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Target: scaffold0022 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 37830 - 37754
Alignment:
Q  284 tcacccttaccttaattcagaag--aaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||  ||||||||||   ||| |||||| ||||||||||||||||||||||||||||    
T  37830 tcacccttaccttaattcagaaggaaaaaatgcaccgtgattggattctcttggctctacttgctcttctctccctt 37754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 135891 - 135815
Alignment:
Q  284 tcacccttaccttaattcagaag--aaaaatgcacaacgatcggattcacttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||  ||||||||||   ||| |||||| ||||||||||||||||||||||||||||    
T  135891 tcacccttaccttaattcagaaggaaaaaatgcaccgtgattggattctcttggctctacttgctcttctctccctt 135815  T

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Target: scaffold0077 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 352
Target Start/End: Complemental strand, 22168 - 22048
Alignment:
Q  235 tgctaaatcaaaatcagaattatataacc-attatcattgagagatagtctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcact 332  Q
    |||||||||||||||| ||||||| || | || ||||||||||| ||| |||| ||||||||||||||||| ||| ||| |||| || ||| | ||||||    
T  22168 tgctaaatcaaaatcataattatacaaactataatcattgagagttagcctcatccttaccttaattcagatgaacaaaagcacgacaatctggttcact 22069  T
Q  333 tggctctactt-gctcttctc 352  Q
    ||||||||||| |||||||||    
T  22068 tggctctacttggctcttctc 22048  T

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Target: scaffold0156 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 355
Target Start/End: Original strand, 26603 - 26673
Alignment:
Q  285 cacccttaccttaattcagaagaaaaatgcacaacga-tcggattcacttggctctacttgctcttctctcc 355  Q
    ||||||||||||||||||||||||||||||||| | | |||| ||| |||||||||||||||||||||||||    
T  26603 cacccttaccttaattcagaagaaaaatgcacagcaattcgggttc-cttggctctacttgctcttctctcc 26673  T

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Target: scaffold0026 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 21925 - 22020
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||| ||||||| || |  ||||||| ||||||| |||||||||||||||||||| ||| |||| |||||||| |||||||||| | |||||||    
T  21925 ttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattctta 22020  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 36502 - 36562
Alignment:
Q  198 aaacctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 258  Q
    |||||||| ||| ||||||||||||| || ||||  ||| |||| ||||||||||||||||    
T  36502 aaacctaaacccaaattcccaatttctaccagaaacatgttaaaccaaaatcagaattata 36562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4788 - 4913
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||| |||||||||||| ||||   ||  |||||||||||||||||||||||  |||||| ||| |  ||||||| |||| ||  ||||||||||    
T  4788 gtttactcgttgtggcgagttgggacgggaaaatctacgggaacataccagttttcactccaaaagcccca-atttcatcaaccctaattccaaatttga 4886  T
Q  100 taggaaactcaacatatgtttattcta 126  Q
     |||||||||||| |||||||||||||    
T  4887 aaggaaactcaacctatgtttattcta 4913  T

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Target: scaffold0306 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4788 - 4913
Alignment:
Q  1 gtttactcgctgtggcgagttgcgacgaacaaccctacgggaacataccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttga 99  Q
    ||||||||| |||||||||||| ||||   ||  |||||||||||||||||||||||  |||||| ||| |  ||||||| |||| ||  ||||||||||    
T  4788 gtttactcgttgtggcgagttgggacgggaaaatctacgggaacataccagttttcactccaaaagcccca-atttcatcaaccctaattccaaatttga 4886  T
Q  100 taggaaactcaacatatgtttattcta 126  Q
     |||||||||||| |||||||||||||    
T  4887 aaggaaactcaacctatgtttattcta 4913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 300
Target Start/End: Original strand, 9569 - 9710
Alignment:
Q  161 ggtttctacact-tttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactatgctaaatc-aaaatcagaattata 258  Q
    |||||||||||| ||||||||||| ||||| |     |||| |||| ||| ||||||||| ||| || ||||||||| |||| | ||||||||||||| |    
T  9569 ggtttctacactctttcaatccaaaaatcaaagaattaaaatctaaacccaaattcccaaattctaccagaactatgttaaacccaaaatcagaattaca 9668  T
Q  259 taaccattatcattgagagatagtctcacccttaccttaatt 300  Q
    || |||| |  ||||||||||| |||||||||||||||||||    
T  9669 tagccatcactattgagagataatctcacccttaccttaatt 9710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 23332 - 23247
Alignment:
Q  91 caaatttgataggaaactcaacatatgtttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||| | ||||||||| ||| |||| |||||||| ||| |||||||| |||||||||||||||  ||||||||||||| |||||    
T  23332 caaattcgttaggaaacttaacctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacatttttc 23247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 163205 - 163262
Alignment:
Q  119 ttattctataacctgaacatcgattcttaacacaattgtcatggtttctacacttttc 176  Q
    |||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  163205 ttattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 163262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 2306 - 2362
Alignment:
Q  284 tcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctct 339  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  2306 tcacccttaccttaattcagaaggacaaatgcacaacgatcggattctcttggctct 2362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 6540 - 6615
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctcccttgt 360  Q
    |||||||||||||||||| ||||| |||| |||||||||||| |||| | |||||||||||| ||||||| |||||||    
T  6540 ctcacccttaccttaatttagaag-aaaacgcacaacgatcgaattctc-tggctctacttgttcttctcacccttgt 6615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 4159 - 4102
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctct 339  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  4159 ctcaccattaccttaattcagaaagacaaatgcacaacgatcggattctcttggctct 4102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 2797 - 2722
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||| | |||||| |||||||||||||||| | || ||| ||| ||||||||||||||||||||||||||||    
T  2797 ctcaccctttctttaatttagaagaaaaatgcacagcaattcgggttc-cttggctctacttgctcttctctccctt 2722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 1060 - 1123
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| |||||||||||||||    
T  1060 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctta 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 8516 - 8575
Alignment:
Q  238 taaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||| | | || ||||||||||| ||| |||||||||||||||    
T  8516 taaatcaaaatcagaattatacatctataatcattgagagttagcctcacccttacctta 8575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 16848 - 16883
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  16848 attgagagatagtctcacccttaccttaattcagaa 16883  T

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Target: scaffold0146 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 13660 - 13695
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  13660 attgagagatagtctcacccttaccttaattcagaa 13695  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 13832 - 13903
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctacttg-ctcttctc 352  Q
    |||||||||||||||||||||| ||| ||||||||||  ||| | |||||||||||||||||| ||||||||    
T  13832 ctcacccttaccttaattcagacgaacaaatgcacaaaaatctggttcacttggctctacttgtctcttctc 13903  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 305
Target Start/End: Complemental strand, 101955 - 101920
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcagaa 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  101955 attgagagatagtctcacccttaccttaattcagaa 101920  T

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Target: scaffold0635 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 7946 - 8008
Alignment:
Q  235 tgctaaatcaaaatcagaattata-taaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||||||||||||||||||  ||| || ||||||||||| ||| ||||||||||||||    
T  7946 tgctaaatcaaaatcagaattatacaaactataatcattgagagttagcctcacccttacctt 8008  T

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Target: scaffold0555 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 9009 - 8951
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    ||||||||  |||||||||||||| || |||||||||| |||||||||||| |||||||    
T  9009 cccaaattcaataggaaactcaacctaagtttattctacaacctgaacatcaattctta 8951  T

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Target: scaffold0461 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 304
Target Start/End: Complemental strand, 35 - 1
Alignment:
Q  270 attgagagatagtctcacccttaccttaattcaga 304  Q
    |||||||||||||||||||||||||||||||||||    
T  35 attgagagatagtctcacccttaccttaattcaga 1  T

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Target: scaffold0278 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 23887 - 23829
Alignment:
Q  131 ctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatca 189  Q
    ||||||||| |||||||||||||||   ||||||||||||||||||||| ||| |||||    
T  23887 ctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23829  T

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Target: scaffold0211 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 317
Target Start/End: Original strand, 10386 - 10420
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgcaca 317  Q
    |||||||||||||||||||||||||||||||||||    
T  10386 ctcacccttaccttaattcagaagaaaaatgcaca 10420  T

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Target: scaffold0211; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 13699 - 13728
Alignment:
Q  329 cacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||||||||||    
T  13699 cacttggctctacttgctcttctctccctt 13728  T

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Target: scaffold0947 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 3365 - 3289
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||| ||| || ||||||||||| || ||| ||| ||||| ||||||||||||||||||||||    
T  3365 ctcacccttaccttaattctgaaagacaaatgcacaacaattcgggttc-cttggatctacttgctcttctctccctt 3289  T

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Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 11615 - 11688
Alignment:
Q  233 tatgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttaccttaattcaga 304  Q
    |||| |||||||||||||||| ||||||||   || || |||||||| ||||||||||||||||||||||||||    
T  11615 tatgttaaatcaaaatcagaaattatataatttataattattgagagttagtctcacccttaccttaattcaga 11688  T

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Target: scaffold0114 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 358
Target Start/End: Complemental strand, 47014 - 46938
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgat-cggattcacttggctctacttgctcttctctccctt 358  Q
    ||||||||||||||||||||||| || ||||||||| | || ||| ||| ||||| ||||||||||||||||||||||    
T  47014 ctcacccttaccttaattcagaaagacaaatgcacagcaattcgggttc-cttggatctacttgctcttctctccctt 46938  T

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Target: scaffold0071 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 51991 - 52052
Alignment:
Q  238 taaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctta 297  Q
    |||||||||||||||| |||||||| | || ||||||||||| |||||||||||||||||||    
T  51991 taaatcaaaatcagaagttatataatctataatcattgagagttagtctcacccttacctta 52052  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 147969 - 148022
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttgg 335  Q
    |||||||||||||||| |||||| || ||||||||||||||||||||| |||||    
T  147969 ctcacccttaccttaaatcagaaaaacaaatgcacaacgatcggattctcttgg 148022  T

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Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 155156 - 155209
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttgg 335  Q
    |||||||||||||||| |||||| || ||||||||||||||||||||| |||||    
T  155156 ctcacccttaccttaaatcagaaagacaaatgcacaacgatcggattctcttgg 155209  T

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Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 186946 - 186913
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  186946 gattctcttggctctacttgctcttctctccctt 186913  T

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Target: scaffold0011; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 196572 - 196539
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  196572 gattctcttggctctacttgctcttctctccctt 196539  T

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Target: scaffold0011; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 252890 - 252923
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  252890 gattctcttggctctacttgctcttctctccctt 252923  T

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Target: scaffold0011; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 259496 - 259529
Alignment:
Q  325 gattcacttggctctacttgctcttctctccctt 358  Q
    ||||| ||||||||||||||||||||||||||||    
T  259496 gattctcttggctctacttgctcttctctccctt 259529  T

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Target: scaffold0456 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 8104 - 8188
Alignment:
Q  270 attgagagatagtctcacccttacctta-attcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccc 356  Q
    ||||||||||||||||||||||||||||  || |||||  ||| ||||||||| ||||||| | || ||||||||| |||||||||||    
T  8104 attgagagatagtctcacccttaccttagttttagaag--aaacgcacaacgaccggattctc-tgactctacttgttcttctctccc 8188  T

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Target: scaffold0456; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 959 - 1043
Alignment:
Q  270 attgagagatagtctcacccttacctta-attcagaagaaaaatgcacaacgatcggattcacttggctctacttgctcttctctccc 356  Q
    ||||||||||||||||||||||||||||  || |||||  ||| ||||||||| ||||||| | || || |||||| |||||||||||    
T  959 attgagagatagtctcacccttaccttagttttagaag--aaacgcacaacgaccggattctc-tgactatacttgttcttctctccc 1043  T

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Target: scaffold0696 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 3342 - 3381
Alignment:
Q  257 tataaccattatcattgagagatagtctcacccttacctt 296  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  3342 tataaccattaccattgagagttagtctcacccttacctt 3381  T

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Target: scaffold0661 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 3217 - 3146
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    ||||||||||||||||||||||| || |||||||||   || |||||| ||||||||||||| |||||||||    
T  3217 ctcacccttaccttaattcagaaggacaaatgcacagaaattggattctcttggctctacttggctcttctc 3146  T

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Target: scaffold0607 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 3784 - 3843
Alignment:
Q  239 aaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctt 296  Q
    ||||||||||||||| |||||||| | || ||||||||||| ||||||||||||||||||    
T  3784 aaatcaaaatcagaagttatataatctataatcattgagagttagtctcacccttacctt 3843  T

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Target: scaffold0516 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 7163 - 7234
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    ||||||||||||||||||||||| || |||||||||   || |||||| ||||||||||||| |||||||||    
T  7163 ctcacccttaccttaattcagaaggacaaatgcacagaaattggattctcttggctctacttggctcttctc 7234  T

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Target: scaffold0485 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 3738 - 3798
Alignment:
Q  235 tgctaaatcaaaatcagaattatataaccattatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||||||||||||||||  | |  |||||||||||| ||| |||||||||||||||    
T  3738 tgctaaatcaaaatcagaattata--atctatatcattgagagttagcctcacccttacctta 3798  T

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Target: scaffold0326 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 4544 - 4474
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| ||||||||||  ||| | ||||||||||||||||| |||||||||    
T  4544 ctcacccttaccttaattcagatgaacaaatgcacaa-aatctggttcacttggctctacttggctcttctc 4474  T

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Target: scaffold0326; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 19726 - 19656
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| ||||||||||  ||| | ||||||||||||||||| |||||||||    
T  19726 ctcacccttaccttaattcagatgaacaaatgcacaa-aatctggttcacttggctctacttggctcttctc 19656  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 8431 - 8360
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    ||||||||||||||||||||||| || |||||||||   || |||||| ||||||||||||| |||||||||    
T  8431 ctcacccttaccttaattcagaaggacaaatgcacagaaattggattctcttggctctacttggctcttctc 8360  T

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Target: scaffold0213 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 18958 - 19001
Alignment:
Q  92 aaatttgataggaaactcaacatatgtttattctataacctgaa 135  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||    
T  18958 aaatttgataggaaacttaacatatgattattctacaacctgaa 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 21927 - 21856
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| |||||||||   ||| | ||||||||||||||||| |||||||||    
T  21927 ctcacccttaccttaattcagatgaacaaatgcacagaaatctggttcacttggctctacttggctcttctc 21856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 26124 - 26053
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| |||||||||   ||| | ||||||||||||||||| |||||||||    
T  26124 ctcacccttaccttaattcagatgaacaaatgcacagaaatctggttcacttggctctacttggctcttctc 26053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 59607 - 59536
Alignment:
Q  283 ctcacccttaccttaattcagaagaaaaatgc-acaacgatcggattcacttggctctactt-gctcttctc 352  Q
    |||||||||||||||||||||| ||| ||| | || || ||| ||||||||||||||||||| |||||||||    
T  59607 ctcacccttaccttaattcagatgaacaattctactacaatctgattcacttggctctacttggctcttctc 59536  T

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Target: scaffold0042 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 291
Target Start/End: Original strand, 67609 - 67749
Alignment:
Q  153 attgtcatggtttctacacttttcaatccaagaatc-atactccaaaaacctaacccccaattcccaatttcaactagaac---tatgctaaatcaaaat 248  Q
    |||||||||||||||||||||| |||| ||| |||| ||| ||  ||||||||| ||| || ||||||||| ||| | |||   |||| |||||||||||    
T  67609 attgtcatggtttctacacttt-caattcaacaatctataatc--aaaacctaaacccaaaatcccaattt-aaccaaaacccttatgttaaatcaaaat 67704  T
Q  249 cagaa-ttatataacc-attatcattgagagatagtctcaccctt 291  Q
    ||||| |||||||| | || ||||||||||| |||||||||||||    
T  67705 cagaagttatataatctataatcattgagagttagtctcaccctt 67749  T

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Target: scaffold0439 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 12081 - 12139
Alignment:
Q  89 cccaaatttgataggaaactcaacatatgtttattctataacctgaacatcgattctta 147  Q
    |||||||||||||||||||   || |||| |||||||| |||||||||||| |||||||    
T  12081 cccaaatttgataggaaacatcacctatgattattctacaacctgaacatcaattctta 12139  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 1411 - 1449
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaa 305  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  1411 atcattgaaagatagtctcacccttaccttatttcagaa 1449  T

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Target: scaffold0217 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 28495 - 28604
Alignment:
Q  29 acaaccctacgggaacataccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctata 128  Q
    ||||| ||||||||| | |||||||||||  ||||||||| |  ||||| | ||||||| ||||||||||| |||||||   || |||  |||||||| |    
T  28495 acaactctacgggaagaaaccagttttcacacaaaaacccca-atttcaactacccaaatcccaaatttgacaggaaacattacgtattattattctaca 28593  T
Q  129 acctgaacatc 139  Q
    |||||||||||    
T  28594 acctgaacatc 28604  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 35706 - 35652
Alignment:
Q  81 acccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaa 135  Q
    |||||||  ||||||||||||||||||| ||| |||| |||||||| ||||||||    
T  35706 acccaaattccaaatttgataggaaactaaacctatgattattctacaacctgaa 35652  T

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Target: scaffold0815 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 1474 - 1507
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaatt 300  Q
    ||||||||||| ||||||||||||||||||||||    
T  1474 atcattgagagttagtctcacccttaccttaatt 1507  T

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Target: scaffold0676 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 2617 - 2702
Alignment:
Q  52 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    |||||| ||||||| || |  ||||||| || |||| |||||||||||||||||||| ||| |||| |||||| | || |||||||    
T  2617 ttttcacccaaaaaacccaaatttcatctactcaaatcccaaatttgataggaaacttaacgtatgattattcaacaatctgaaca 2702  T

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Target: scaffold0338 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 2909 - 2844
Alignment:
Q  235 tgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttaccttaa 298  Q
    ||||||||||| ||||||| |||||||| | |  ||||||||||| ||||||||||||||||||||    
T  2909 tgctaaatcaacatcagaagttatataatctaaaatcattgagagttagtctcacccttaccttaa 2844  T

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Target: scaffold0310 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 17050 - 17103
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttgg 335  Q
    ||||||||||||||||||||||| |||||||||||| | || |||||| |||||    
T  17050 ctcacccttaccttaattcagaatgaaaaatgcacatcaattggattctcttgg 17103  T

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Target: scaffold0298 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 587 - 656
Alignment:
Q  233 tatgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttaccttaatt 300  Q
    |||| |||||||||||||||| ||||||||   || || |||||||| ||||||||||||||||||||||    
T  587 tatgttaaatcaaaatcagaagttatataatttataattattgagagttagtctcacccttaccttaatt 656  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 14113 - 14056
Alignment:
Q  283 ctcacccttaccttaattcagaagaa-aaatgcacaacgatcggattcacttggctct 339  Q
    ||||||||||||||||| |||| ||| |||||||||   |||||||||||||||||||    
T  14113 ctcacccttaccttaatccagatgaacaaatgcacagaaatcggattcacttggctct 14056  T

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Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 21372 - 21428
Alignment:
Q  81 acccaaaccccaaatttgataggaaactcaacatatgtttattctataacctgaaca 137  Q
    ||||||| |||||||||||||| ||||| ||  |||| |||||||| ||||||||||    
T  21372 acccaaatcccaaatttgatagaaaacttaaactatgattattctacaacctgaaca 21428  T

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Target: scaffold0096 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 3888 - 3945
Alignment:
Q  283 ctcacccttaccttaattcagaa-gaaaaatgcacaacgatcggattcacttggctct 339  Q
    |||||| |||||||||||||||| |||||||||||| | || |||||| |||||||||    
T  3888 ctcaccattaccttaattcagaaggaaaaatgcacagcaattggattctcttggctct 3945  T

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Target: scaffold1461 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 1515 - 1471
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaaaaa 311  Q
    |||||||  ||||| ||||||||||||||||||| ||||||||||    
T  1515 atcattgcaagataatctcacccttaccttaatttagaagaaaaa 1471  T

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Target: scaffold0483 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 11051 - 11007
Alignment:
Q  267 atcattgagagatagtctcacccttaccttaattcagaagaaaaa 311  Q
    |||||||  ||||| ||||||||||||||||||| ||||||||||    
T  11051 atcattgcaagataatctcacccttaccttaatttagaagaaaaa 11007  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 11646 - 11710
Alignment:
Q  235 tgctaaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctta 297  Q
    ||||||||||| ||||||| |||||||| | |  ||||||||||| |||||||||||||||||||    
T  11646 tgctaaatcaacatcagaagttatataatctaaaatcattgagagttagtctcacccttacctta 11710  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 21232 - 21260
Alignment:
Q  330 acttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||    
T  21232 acttggctctacttgctcttctctccctt 21260  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 68978 - 69038
Alignment:
Q  238 taaatcaaaatcagaa-ttatataacc-attatcattgagagatagtctcacccttacctt 296  Q
    |||||||||||||||| |||||||| | || || |||||||| ||||||||||||||||||    
T  68978 taaatcaaaatcagaagttatataatctataattattgagagttagtctcacccttacctt 69038  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 42167 - 42111
Alignment:
Q  202 ctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 258  Q
    |||| ||| |||||||||||| ||| ||||||||| |||| |||| |||||||||||    
T  42167 ctaaacccaaattcccaattttaaccagaactatgttaaaccaaactcagaattata 42111  T

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Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 52862 - 52806
Alignment:
Q  202 ctaacccccaattcccaatttcaactagaactatgctaaatcaaaatcagaattata 258  Q
    |||| ||| |||||||||||| ||| ||||||||| |||| |||| |||||||||||    
T  52862 ctaaacccaaattcccaattttaaccagaactatgttaaaccaaactcagaattata 52806  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 72149 - 72177
Alignment:
Q  330 acttggctctacttgctcttctctccctt 358  Q
    |||||||||||||||||||||||||||||    
T  72149 acttggctctacttgctcttctctccctt 72177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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