View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2371_low_58 (Length: 280)
Name: NF2371_low_58
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2371_low_58 |
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Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 35109779 - 35109531
Alignment:
| Q |
19 |
aatgaggataattaaaccagactattttttcttgtacataaattacaccatatgattccccacaaaaaggaaaccttcctccaaaagggatatagaaaga |
118 |
Q |
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| T |
35109779 |
aatgaggataattaaaccagactattttttcttgtacataaattacaccatatgattccccacaaaaaggaaaccttcctccaaaagggatatagaaaga |
35109680 |
T |
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| Q |
119 |
atgagtgatatatttaatgttattgtcaccagtaagtgttctcatttcatttcatggtttacaagacatgcctaagtgactctcatctatttcccatatt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35109679 |
atgagtgatatatttaatgttattgtcaccagtaagtgttctcatttcatttcatggtttacaagacatgcctaagtgactctcatctatttcccatatt |
35109580 |
T |
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| Q |
219 |
tgtagctaaagttgctgtttggtgtattggacctatttttaacttctat |
267 |
Q |
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||||||||||||||||| ||||||||||||||||||||| ||||||||| |
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| T |
35109579 |
tgtagctaaagttgctgcttggtgtattggacctattttaaacttctat |
35109531 |
T |
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