View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2371_low_77 (Length: 250)
Name: NF2371_low_77
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2371_low_77 |
 |  |
|
| [»] scaffold0330 (2 HSPs) |
 |  |  |
|
| [»] chr3 (7 HSPs) |
 |  |
|
| [»] chr2 (8 HSPs) |
 |  |
|
| [»] scaffold0151 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 31414778 - 31414893
Alignment:
| Q |
134 |
gtgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaagg |
233 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||| |
|
|
| T |
31414778 |
gtgttttacttttcattgaaaaagtgctcatgccaaagcttttaatctcaacccttctttttacatttgccacatgtcacatatcaataaagtgaaaagg |
31414877 |
T |
 |
| Q |
234 |
aataaattgaggaaac |
249 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
31414878 |
aataaattgaggaaac |
31414893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0330 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0330
Description:
Target: scaffold0330; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 12652 - 12540
Alignment:
| Q |
137 |
ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaat |
236 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |
|
|
| T |
12652 |
ttttatttttcattaaaaaagtgctcatgccaaagcttttaatcccaacccttgtttttacatttgccacatgtcacacaacaataaagtgaaaaggaat |
12553 |
T |
 |
| Q |
237 |
aaattgaggaaac |
249 |
Q |
| |
|
||||||||||||| |
|
|
| T |
12552 |
aaattgaggaaac |
12540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0330; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 13176 - 13288
Alignment:
| Q |
137 |
ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaat |
236 |
Q |
| |
|
||||| ||||||||||||| ||| | |||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
13176 |
ttttatttttcattaaaaa-gtgctaatgccaaagcttttaatcccaacccttgactttaaatttgccacatgtcacacatcaataaagtgaaaaggaat |
13274 |
T |
 |
| Q |
237 |
aaattgaggaaacc |
250 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
13275 |
aaattgaggaaacc |
13288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 37886788 - 37886676
Alignment:
| Q |
137 |
ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaat |
236 |
Q |
| |
|
||||| ||||||||||||| ||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
37886788 |
ttttatttttcattaaaaa-gtgctcatgccaaagcttttaatcccaacccttgactttacatttgccacatgtcacacatcaataaagtgaaaaggaat |
37886690 |
T |
 |
| Q |
237 |
aaattgaggaaacc |
250 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
37886689 |
aaattgaggaaacc |
37886676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 55444512 - 55444617
Alignment:
| Q |
135 |
tgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaagga |
234 |
Q |
| |
|
||||||| ||||||||||| ||||||| ||| | | || ||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
55444512 |
tgttttatttttcattaaacaagtgtttatgatagagattctaatcccagcccttgtttttacatttgccacatgtcacacatcaataaagtgaaaaggg |
55444611 |
T |
 |
| Q |
235 |
ataaat |
240 |
Q |
| |
|
|||||| |
|
|
| T |
55444612 |
ataaat |
55444617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 40613729 - 40613841
Alignment:
| Q |
133 |
tgtgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaag |
232 |
Q |
| |
|
||||||||| ||||||||||| ||||||| ||| |||||| ||||| ||| |||||| ||| | || |||||||||||| ||||| |||||||||| || |
|
|
| T |
40613729 |
tgtgttttatttttcattaaacaagtgtttatgttaaacctgttaatttcagcccttgatttaatatgtgccacatgtcagacatctacaaaatgaacag |
40613828 |
T |
 |
| Q |
233 |
gaataaattgagg |
245 |
Q |
| |
|
| |||||| |||| |
|
|
| T |
40613829 |
ggataaatggagg |
40613841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 3002176 - 3002074
Alignment:
| Q |
143 |
ttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattg |
242 |
Q |
| |
|
||||||| ||||||||||| |||| | | ||||||||| | |||||| ||| |||||||||| || ||||||||||| ||||||||||| |||||| | |
|
|
| T |
3002176 |
ttttcatcaaaaaagtgtttatgctagagcttttaatcctagcccttgatttaacatttgccaaatatcacacatcaatgaaatgaaaagggataaatgg |
3002077 |
T |
 |
| Q |
243 |
agg |
245 |
Q |
| |
|
||| |
|
|
| T |
3002076 |
agg |
3002074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 55439960 - 55439897
Alignment:
| Q |
177 |
aatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaat |
240 |
Q |
| |
|
|||||||||||||| || || | |||||| |||||||||||||| ||| |||||||| |||||| |
|
|
| T |
55439960 |
aatctcaacccttgattgtatacttgccatatgtcacacatcaataaagtgaaaagggataaat |
55439897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 17057230 - 17057157
Alignment:
| Q |
145 |
ttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
|||| |||| ||||||| | ||||||||||||||||||||| ||| ||| | |||||||| ||||||||||| |
|
|
| T |
17057230 |
ttcagtaaacaagtgttttttccaaaccttttaatctcaaccgttggtttcatttttgccacgtgtcacacatc |
17057157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 46461963 - 46461890
Alignment:
| Q |
172 |
cttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgagg |
245 |
Q |
| |
|
|||||||||||| || ||| ||||| ||||||||||||||| ||||| | |||||||| || |||||| |||| |
|
|
| T |
46461963 |
cttttaatctcagccattgattttatatttgccacatgtcaaacatccatgaaatgaaatggtataaatggagg |
46461890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 34173808 - 34173906
Alignment:
| Q |
152 |
aaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgaggaaacc |
250 |
Q |
| |
|
|||||||||||| |||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
34173808 |
aaaaagtgttcacgccatagcttttaatctcaaccattgtttttacatttgtcacatgtcacacatcaataaaatgaaaaggaataaattgagaaaacc |
34173906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 34172538 - 34172445
Alignment:
| Q |
156 |
agtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgaggaaacc |
250 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
34172538 |
agtgttcatgc-aaagcttttaatctcaacccttatttttacatttgtcacatgtcacacatcaataaaatgaaaaggaataaattgagaaaacc |
34172445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 39064568 - 39064634
Alignment:
| Q |
183 |
aacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgaggaaac |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
39064568 |
aacccttgtttttacatttgccacatgtcacacatcaataaaatgaaaaggaataaattgaggaaac |
39064634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 39063905 - 39063827
Alignment:
| Q |
172 |
cttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgaggaaacc |
250 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||| |
|
|
| T |
39063905 |
cttttaatcccaaccattgtttttacatttgccacatgtcatacatcaataaagtgaaaatgaataaattgaggaaacc |
39063827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 39064484 - 39064544
Alignment:
| Q |
137 |
ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttac |
197 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||| || |||||| |||||||||||||||| |
|
|
| T |
39064484 |
ttttatttttcattaaaaaagtgctcatgccaaagctcttaatcacaacccttgtttttac |
39064544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 10148553 - 10148628
Alignment:
| Q |
143 |
ttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
||||||||||| ||||||| | |||||| |||||||||||||||||| ||||| ||| |||||||||||||||| |
|
|
| T |
10148553 |
ttttcattaaacaagtgttttttccaaactttttaatctcaacccttgattttatttttaccacatgtcacacatc |
10148628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 33513941 - 33514046
Alignment:
| Q |
135 |
tgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaagga |
234 |
Q |
| |
|
||||||| ||||||| | ||||||| | |||| | | ||||||||||||||||||| |||| |||||| || |||||| ||||||| || |||||||| |
|
|
| T |
33513941 |
tgttttatttttcatcagaaaagtgattatgctacaacttttaatctcaacccttgatttttcatttgtcaaatgtcatacatcaatgaagtgaaaaggg |
33514040 |
T |
 |
| Q |
235 |
ataaat |
240 |
Q |
| |
|
|||||| |
|
|
| T |
33514041 |
ataaat |
33514046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 10147892 - 10147840
Alignment:
| Q |
166 |
ccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
|||||| ||||||||||||| |||| ||||| |||||||||||||||||||| |
|
|
| T |
10147892 |
ccaaactttttaatctcaacgcttgattttatttttgccacatgtcacacatc |
10147840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 19778695 - 19778797
Alignment:
| Q |
137 |
ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaat |
236 |
Q |
| |
|
||||| ||||||||| | ||||||| |||| | | |||||||||||||||||| |||||||||||||||||||||| ||||||| ||| | ||||||||| |
|
|
| T |
19778695 |
ttttatttttcattacacaagtgtttatgctagagcttttaatctcaacccttatttttacatttgccacatgtcaaacatcaataaagtaaaaaggaat |
19778794 |
T |
 |
| Q |
237 |
aaa |
239 |
Q |
| |
|
||| |
|
|
| T |
19778795 |
aaa |
19778797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 43379447 - 43379499
Alignment:
| Q |
166 |
ccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
43379447 |
ccaaaccttttaatcccaacccttgcttttatttttgccacatgtcacacatc |
43379499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 43378677 - 43378626
Alignment:
| Q |
167 |
caaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
43378677 |
caaaccttttaatctcaacccttgcttttatttttgccacgtgtcacacatc |
43378626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 1217921 - 1217846
Alignment:
| Q |
143 |
ttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
||||||| | ||||||| | ||| ||||||||||||| |||||||| ||| |||||||||| |||||||||||| |
|
|
| T |
1217921 |
ttttcatcagaaaagtgcttatgttaaaccttttaatccaaacccttgatttcacatttgccaaatgtcacacatc |
1217846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 19778212 - 19778126
Alignment:
| Q |
134 |
gtgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaa |
220 |
Q |
| |
|
|||||||||||||||||||||| ||| | ||| ||| |||||||||||| || | ||||| | |||||| |||||||||||||| |
|
|
| T |
19778212 |
gtgttttacttttcattaaaaaggtgcttatgttaaaaaatttaatctcaacgctcgattttatacttgccaaatgtcacacatcaa |
19778126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 1222328 - 1222376
Alignment:
| Q |
172 |
cttttaatctcaacccttgtttttacatttgccacatgtcacacatcaa |
220 |
Q |
| |
|
||||||||| ||||| ||| |||||||||||||| ||||||||||||| |
|
|
| T |
1222328 |
cttttaatcccaacctttgattttacatttgccaagtgtcacacatcaa |
1222376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 41347230 - 41347118
Alignment:
| Q |
133 |
tgtgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaag |
232 |
Q |
| |
|
||||||||| ||||||||||| ||||||| ||| ||| ||||||||||| |||||| ||| | ||||||||||||||| ||||| ||||||| || || |
|
|
| T |
41347230 |
tgtgttttatttttcattaaacaagtgtttatgttaaattttttaatctcagcccttgatttaatatttgccacatgtcagacatctacaaaataaacag |
41347131 |
T |
 |
| Q |
233 |
gaataaattgagg |
245 |
Q |
| |
|
| |||||| |||| |
|
|
| T |
41347130 |
ggataaatggagg |
41347118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 1765174 - 1765279
Alignment:
| Q |
135 |
tgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaagga |
234 |
Q |
| |
|
||||||| || | |||||| ||||||| |||| | | ||||||||| | ||||| |||||||||||||||||| ||||||||| ||| ||||||||| |
|
|
| T |
1765174 |
tgttttatttcttattaaacaagtgtttatgctagagcttttaatcctagcccttagttttacatttgccacatgctacacatcaataaagtgaaaagga |
1765273 |
T |
 |
| Q |
235 |
ataaat |
240 |
Q |
| |
|
|||||| |
|
|
| T |
1765274 |
ataaat |
1765279 |
T |
 |
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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 13207451 - 13207400
Alignment:
| Q |
167 |
caaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
13207451 |
caaatcttttaatctcaacccttgcttttatttttgccacgtgtcacacatc |
13207400 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 38443141 - 38443088
Alignment:
| Q |
166 |
ccaaaccttttaatctcaacccttgtttttaca-tttgccacatgtcacacatc |
218 |
Q |
| |
|
|||| |||||||||||||||||||| |||| | |||||||||||||||||||| |
|
|
| T |
38443141 |
ccaacccttttaatctcaacccttggttttctattttgccacatgtcacacatc |
38443088 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 38444430 - 38444479
Alignment:
| Q |
169 |
aaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
|||||||||||| ||||||||| ||| || ||| |||||||||||||||| |
|
|
| T |
38444430 |
aaccttttaatcacaacccttgatttaactttttccacatgtcacacatc |
38444479 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0151 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0151
Description:
Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 20846 - 20794
Alignment:
| Q |
166 |
ccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc |
218 |
Q |
| |
|
|||||||||||||||||| || ||| ||||| ||| |||||||||||||||| |
|
|
| T |
20846 |
ccaaaccttttaatctcagccattggttttatttttaccacatgtcacacatc |
20794 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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