View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2371_low_77 (Length: 250)

Name: NF2371_low_77
Description: NF2371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2371_low_77
NF2371_low_77
[»] chr4 (1 HSPs)
chr4 (134-249)||(31414778-31414893)
[»] scaffold0330 (2 HSPs)
scaffold0330 (137-249)||(12540-12652)
scaffold0330 (137-250)||(13176-13288)
[»] chr3 (7 HSPs)
chr3 (137-250)||(37886676-37886788)
chr3 (135-240)||(55444512-55444617)
chr3 (133-245)||(40613729-40613841)
chr3 (143-245)||(3002074-3002176)
chr3 (177-240)||(55439897-55439960)
chr3 (145-218)||(17057157-17057230)
chr3 (172-245)||(46461890-46461963)
[»] chr2 (8 HSPs)
chr2 (152-250)||(34173808-34173906)
chr2 (156-250)||(34172445-34172538)
chr2 (183-249)||(39064568-39064634)
chr2 (172-250)||(39063827-39063905)
chr2 (137-197)||(39064484-39064544)
chr2 (143-218)||(10148553-10148628)
chr2 (135-240)||(33513941-33514046)
chr2 (166-218)||(10147840-10147892)
[»] chr5 (6 HSPs)
chr5 (137-239)||(19778695-19778797)
chr5 (166-218)||(43379447-43379499)
chr5 (167-218)||(43378626-43378677)
chr5 (143-218)||(1217846-1217921)
chr5 (134-220)||(19778126-19778212)
chr5 (172-220)||(1222328-1222376)
[»] chr7 (1 HSPs)
chr7 (133-245)||(41347118-41347230)
[»] chr1 (1 HSPs)
chr1 (135-240)||(1765174-1765279)
[»] chr6 (1 HSPs)
chr6 (167-218)||(13207400-13207451)
[»] chr8 (2 HSPs)
chr8 (166-218)||(38443088-38443141)
chr8 (169-218)||(38444430-38444479)
[»] scaffold0151 (1 HSPs)
scaffold0151 (166-218)||(20794-20846)


Alignment Details
Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 31414778 - 31414893
Alignment:
134 gtgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaagg 233  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||    
31414778 gtgttttacttttcattgaaaaagtgctcatgccaaagcttttaatctcaacccttctttttacatttgccacatgtcacatatcaataaagtgaaaagg 31414877  T
234 aataaattgaggaaac 249  Q
    ||||||||||||||||    
31414878 aataaattgaggaaac 31414893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 12652 - 12540
Alignment:
137 ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaat 236  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||    
12652 ttttatttttcattaaaaaagtgctcatgccaaagcttttaatcccaacccttgtttttacatttgccacatgtcacacaacaataaagtgaaaaggaat 12553  T
237 aaattgaggaaac 249  Q
    |||||||||||||    
12552 aaattgaggaaac 12540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 13176 - 13288
Alignment:
137 ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaat 236  Q
    ||||| ||||||||||||| ||| | |||||||| ||||||||| |||||||||  |||| ||||||||||||||||||||||| ||| |||||||||||    
13176 ttttatttttcattaaaaa-gtgctaatgccaaagcttttaatcccaacccttgactttaaatttgccacatgtcacacatcaataaagtgaaaaggaat 13274  T
237 aaattgaggaaacc 250  Q
    ||||||||||||||    
13275 aaattgaggaaacc 13288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 37886788 - 37886676
Alignment:
137 ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaat 236  Q
    ||||| ||||||||||||| ||| |||||||||| ||||||||| |||||||||  |||||||||||||||||||||||||||| ||| |||||||||||    
37886788 ttttatttttcattaaaaa-gtgctcatgccaaagcttttaatcccaacccttgactttacatttgccacatgtcacacatcaataaagtgaaaaggaat 37886690  T
237 aaattgaggaaacc 250  Q
    ||||||||||||||    
37886689 aaattgaggaaacc 37886676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 55444512 - 55444617
Alignment:
135 tgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaagga 234  Q
    ||||||| ||||||||||| ||||||| |||  | |  || ||||| || |||||||||||||||||||||||||||||||||||| ||| ||||||||     
55444512 tgttttatttttcattaaacaagtgtttatgatagagattctaatcccagcccttgtttttacatttgccacatgtcacacatcaataaagtgaaaaggg 55444611  T
235 ataaat 240  Q
    ||||||    
55444612 ataaat 55444617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 40613729 - 40613841
Alignment:
133 tgtgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaag 232  Q
    ||||||||| ||||||||||| ||||||| |||  |||||| ||||| ||| |||||| ||| | || |||||||||||| ||||| |||||||||| ||    
40613729 tgtgttttatttttcattaaacaagtgtttatgttaaacctgttaatttcagcccttgatttaatatgtgccacatgtcagacatctacaaaatgaacag 40613828  T
233 gaataaattgagg 245  Q
    | |||||| ||||    
40613829 ggataaatggagg 40613841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 3002176 - 3002074
Alignment:
143 ttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattg 242  Q
    ||||||| ||||||||||| |||| | | |||||||||  | |||||| ||| |||||||||| || |||||||||||  ||||||||||| |||||| |    
3002176 ttttcatcaaaaaagtgtttatgctagagcttttaatcctagcccttgatttaacatttgccaaatatcacacatcaatgaaatgaaaagggataaatgg 3002077  T
243 agg 245  Q
    |||    
3002076 agg 3002074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 55439960 - 55439897
Alignment:
177 aatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaat 240  Q
    |||||||||||||| || || | |||||| |||||||||||||| ||| |||||||| ||||||    
55439960 aatctcaacccttgattgtatacttgccatatgtcacacatcaataaagtgaaaagggataaat 55439897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 17057230 - 17057157
Alignment:
145 ttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    |||| |||| |||||||  | ||||||||||||||||||||| ||| ||| |  |||||||| |||||||||||    
17057230 ttcagtaaacaagtgttttttccaaaccttttaatctcaaccgttggtttcatttttgccacgtgtcacacatc 17057157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 46461963 - 46461890
Alignment:
172 cttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgagg 245  Q
    |||||||||||| || ||| ||||| ||||||||||||||| ||||| |  |||||||| || |||||| ||||    
46461963 cttttaatctcagccattgattttatatttgccacatgtcaaacatccatgaaatgaaatggtataaatggagg 46461890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 34173808 - 34173906
Alignment:
152 aaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgaggaaacc 250  Q
    |||||||||||| |||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
34173808 aaaaagtgttcacgccatagcttttaatctcaaccattgtttttacatttgtcacatgtcacacatcaataaaatgaaaaggaataaattgagaaaacc 34173906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 34172538 - 34172445
Alignment:
156 agtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgaggaaacc 250  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
34172538 agtgttcatgc-aaagcttttaatctcaacccttatttttacatttgtcacatgtcacacatcaataaaatgaaaaggaataaattgagaaaacc 34172445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 39064568 - 39064634
Alignment:
183 aacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgaggaaac 249  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
39064568 aacccttgtttttacatttgccacatgtcacacatcaataaaatgaaaaggaataaattgaggaaac 39064634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 39063905 - 39063827
Alignment:
172 cttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaataaattgaggaaacc 250  Q
    ||||||||| ||||| ||||||||||||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||    
39063905 cttttaatcccaaccattgtttttacatttgccacatgtcatacatcaataaagtgaaaatgaataaattgaggaaacc 39063827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 39064484 - 39064544
Alignment:
137 ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttac 197  Q
    ||||| ||||||||||||||||| |||||||||| || |||||| ||||||||||||||||    
39064484 ttttatttttcattaaaaaagtgctcatgccaaagctcttaatcacaacccttgtttttac 39064544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 10148553 - 10148628
Alignment:
143 ttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    ||||||||||| |||||||  | |||||| |||||||||||||||||| |||||  ||| ||||||||||||||||    
10148553 ttttcattaaacaagtgttttttccaaactttttaatctcaacccttgattttatttttaccacatgtcacacatc 10148628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 33513941 - 33514046
Alignment:
135 tgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaagga 234  Q
    ||||||| ||||||| | ||||||| | |||| | | ||||||||||||||||||| |||| |||||| || |||||| |||||||  || ||||||||     
33513941 tgttttatttttcatcagaaaagtgattatgctacaacttttaatctcaacccttgatttttcatttgtcaaatgtcatacatcaatgaagtgaaaaggg 33514040  T
235 ataaat 240  Q
    ||||||    
33514041 ataaat 33514046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 10147892 - 10147840
Alignment:
166 ccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    |||||| ||||||||||||| |||| |||||  ||||||||||||||||||||    
10147892 ccaaactttttaatctcaacgcttgattttatttttgccacatgtcacacatc 10147840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 19778695 - 19778797
Alignment:
137 ttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaaggaat 236  Q
    ||||| ||||||||| | ||||||| |||| | | |||||||||||||||||| |||||||||||||||||||||| ||||||| ||| | |||||||||    
19778695 ttttatttttcattacacaagtgtttatgctagagcttttaatctcaacccttatttttacatttgccacatgtcaaacatcaataaagtaaaaaggaat 19778794  T
237 aaa 239  Q
    |||    
19778795 aaa 19778797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 43379447 - 43379499
Alignment:
166 ccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    ||||||||||||||| ||||||||| |||||  ||||||||||||||||||||    
43379447 ccaaaccttttaatcccaacccttgcttttatttttgccacatgtcacacatc 43379499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 43378677 - 43378626
Alignment:
167 caaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    |||||||||||||||||||||||| |||||  |||||||| |||||||||||    
43378677 caaaccttttaatctcaacccttgcttttatttttgccacgtgtcacacatc 43378626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 1217921 - 1217846
Alignment:
143 ttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    ||||||| | ||||||| | |||  |||||||||||||  |||||||| ||| |||||||||| ||||||||||||    
1217921 ttttcatcagaaaagtgcttatgttaaaccttttaatccaaacccttgatttcacatttgccaaatgtcacacatc 1217846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 19778212 - 19778126
Alignment:
134 gtgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaa 220  Q
    |||||||||||||||||||||| ||| | |||  |||   |||||||||||| || | ||||| | |||||| ||||||||||||||    
19778212 gtgttttacttttcattaaaaaggtgcttatgttaaaaaatttaatctcaacgctcgattttatacttgccaaatgtcacacatcaa 19778126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 1222328 - 1222376
Alignment:
172 cttttaatctcaacccttgtttttacatttgccacatgtcacacatcaa 220  Q
    ||||||||| ||||| ||| ||||||||||||||  |||||||||||||    
1222328 cttttaatcccaacctttgattttacatttgccaagtgtcacacatcaa 1222376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 41347230 - 41347118
Alignment:
133 tgtgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaag 232  Q
    ||||||||| ||||||||||| ||||||| |||  |||  ||||||||||| |||||| ||| | ||||||||||||||| ||||| ||||||| || ||    
41347230 tgtgttttatttttcattaaacaagtgtttatgttaaattttttaatctcagcccttgatttaatatttgccacatgtcagacatctacaaaataaacag 41347131  T
233 gaataaattgagg 245  Q
    | |||||| ||||    
41347130 ggataaatggagg 41347118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 1765174 - 1765279
Alignment:
135 tgttttacttttcattaaaaaagtgttcatgccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatcaacaaaatgaaaagga 234  Q
    ||||||| || | |||||| ||||||| |||| | | |||||||||  | |||||  ||||||||||||||||||  ||||||||| ||| |||||||||    
1765174 tgttttatttcttattaaacaagtgtttatgctagagcttttaatcctagcccttagttttacatttgccacatgctacacatcaataaagtgaaaagga 1765273  T
235 ataaat 240  Q
    ||||||    
1765274 ataaat 1765279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 13207451 - 13207400
Alignment:
167 caaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    |||| ||||||||||||||||||| |||||  |||||||| |||||||||||    
13207451 caaatcttttaatctcaacccttgcttttatttttgccacgtgtcacacatc 13207400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 38443141 - 38443088
Alignment:
166 ccaaaccttttaatctcaacccttgtttttaca-tttgccacatgtcacacatc 218  Q
    |||| |||||||||||||||||||| ||||  | ||||||||||||||||||||    
38443141 ccaacccttttaatctcaacccttggttttctattttgccacatgtcacacatc 38443088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 38444430 - 38444479
Alignment:
169 aaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    |||||||||||| ||||||||| ||| || ||| ||||||||||||||||    
38444430 aaccttttaatcacaacccttgatttaactttttccacatgtcacacatc 38444479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 20846 - 20794
Alignment:
166 ccaaaccttttaatctcaacccttgtttttacatttgccacatgtcacacatc 218  Q
    |||||||||||||||||| || ||| |||||  ||| ||||||||||||||||    
20846 ccaaaccttttaatctcagccattggttttatttttaccacatgtcacacatc 20794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University