View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2375_high_27 (Length: 276)
Name: NF2375_high_27
Description: NF2375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2375_high_27 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 259
Target Start/End: Original strand, 1882911 - 1883163
Alignment:
| Q |
6 |
tccatactttcactctcattattaattagtaataaactaaacctatataaggccaagtggcatatttttaatcataagaggaatgtttttgtgacataac |
105 |
Q |
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| T |
1882911 |
tccatactttcactctcattattaattagtaatgaactaaacctatataaggccaagtggcatatttttaatcataagaggaatgtttttgtgacataac |
1883010 |
T |
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| Q |
106 |
aatattgaataacgaactaaaagaatnnnnnnnnngtgagctgaaaatgaaaagacatgtatggtgaggcataaagacactgaaactggcattgtcctta |
205 |
Q |
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| T |
1883011 |
aatattgaataaccaactaaaagaataaaaaaaa-gtgagctgaaaatgaaaagacatgtatggtgaggcataaagacactgaaactggcattgtcctta |
1883109 |
T |
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| Q |
206 |
cttatacagttatacatacatttctatcatccaatccaaatctaatatactcat |
259 |
Q |
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| T |
1883110 |
cttatacagttatacatacatttctatcatccaatccaaatctaatatactcat |
1883163 |
T |
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