View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2375_high_31 (Length: 248)
Name: NF2375_high_31
Description: NF2375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2375_high_31 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 42224340 - 42224112
Alignment:
| Q |
1 |
acccggacagcgtgctcgtggtaaccatcaacggctcaggttgtgtgattgagatcatatatgtcacgctcttcttgatttactctgatggcaacaaaag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42224340 |
acccggacagcgtgctcgtggtaaccatcaacggctcaggttgtgtgattgagatcatatatgtcacgctcttcttgatttactctgatggcaacaaaag |
42224241 |
T |
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| Q |
101 |
gctcaaggtccttatgtggctagttgttgaacttgttttcatcgcagctcttacatttgtcacgttgagccttgttcacgacgtcacgaaacgctctgcc |
200 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
42224240 |
gctcaaggtccttatgtggctagttgttgaactcgttttcatcgcagctcttacatttgtcacgttgagccttgttcacgacgtcgcgaaacgctctgcc |
42224141 |
T |
|
| Q |
201 |
attgttggtacgacatgcattgtcttcaa |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
42224140 |
attgttggtacgacatgcattgtcttcaa |
42224112 |
T |
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