View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2375_high_33 (Length: 244)
Name: NF2375_high_33
Description: NF2375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2375_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 44454221 - 44453990
Alignment:
| Q |
1 |
catataacttgttctcaaagtatcagacaattacagtgaatctatgcattttttgaaggnnnnnnn-ttgaaagatcaatattgaagcttctttattccg |
99 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
44454221 |
catataacttgttctcaaagtatcagacaattacagtgaatctatgcattttttgaaggaaaaaaaattgaaagatcaatattgaagcttctttattccg |
44454122 |
T |
|
| Q |
100 |
ggaaatgacggcaatattgctataagtgcatcaccataaccaacagaatctgtcacaaacacacacacaaagtaatgaacaaaatccacataaaaatgcc |
199 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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|
| T |
44454121 |
ggaaatgacggcaatattgctataagtgtatcaccataaccaacaggatctgtcacaaacacacacacaaagtaatgaacaaaacccacataaaaatgcc |
44454022 |
T |
|
| Q |
200 |
attatgtttaaacagataaaaatagaggtaac |
231 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
44454021 |
attatgtttaaacagataaaaatagaggtaac |
44453990 |
T |
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