View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2375_high_9 (Length: 432)

Name: NF2375_high_9
Description: NF2375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2375_high_9
NF2375_high_9
[»] chr8 (38 HSPs)
chr8 (1-249)||(10656500-10656748)
chr8 (88-245)||(15001513-15001670)
chr8 (88-205)||(41548705-41548822)
chr8 (88-245)||(29610956-29611113)
chr8 (88-249)||(37618293-37618454)
chr8 (87-252)||(40389080-40389245)
chr8 (79-241)||(30542914-30543076)
chr8 (88-205)||(7591348-7591465)
chr8 (88-205)||(22999345-22999462)
chr8 (88-203)||(37474789-37474904)
chr8 (88-202)||(30501235-30501349)
chr8 (81-203)||(34063217-34063339)
chr8 (88-245)||(8672956-8673113)
chr8 (88-205)||(10467151-10467268)
chr8 (88-245)||(39642930-39643087)
chr8 (88-245)||(41709824-41709981)
chr8 (81-252)||(12753219-12753390)
chr8 (88-249)||(7394715-7394876)
chr8 (88-245)||(14004945-14005102)
chr8 (88-245)||(31513484-31513641)
chr8 (84-252)||(17520635-17520802)
chr8 (88-245)||(4052527-4052684)
chr8 (88-249)||(6386619-6386780)
chr8 (88-245)||(35225709-35225866)
chr8 (88-203)||(34101597-34101712)
chr8 (88-242)||(5968765-5968919)
chr8 (336-403)||(10656835-10656904)
chr8 (88-154)||(31732188-31732254)
chr8 (88-245)||(16485710-16485867)
chr8 (88-245)||(29672223-29672381)
chr8 (88-245)||(37664183-37664341)
chr8 (88-154)||(38047484-38047550)
chr8 (88-203)||(3251557-3251672)
chr8 (88-203)||(25478332-25478447)
chr8 (88-203)||(27104048-27104163)
chr8 (83-154)||(45114193-45114264)
chr8 (88-154)||(21272805-21272871)
chr8 (138-206)||(5892154-5892222)
[»] chr7 (41 HSPs)
chr7 (88-245)||(21784922-21785079)
chr7 (88-245)||(38301393-38301551)
chr7 (88-251)||(47316585-47316748)
chr7 (79-245)||(43158564-43158730)
chr7 (88-245)||(26994112-26994269)
chr7 (88-205)||(43368292-43368409)
chr7 (84-200)||(18386620-18386736)
chr7 (88-245)||(10932444-10932601)
chr7 (88-245)||(11250668-11250825)
chr7 (88-245)||(47953241-47953398)
chr7 (88-252)||(43213812-43213976)
chr7 (88-192)||(46633796-46633900)
chr7 (88-203)||(3922590-3922705)
chr7 (88-203)||(16963231-16963346)
chr7 (79-154)||(17237218-17237293)
chr7 (88-245)||(41211087-41211244)
chr7 (88-245)||(11321772-11321929)
chr7 (88-205)||(20127380-20127497)
chr7 (88-201)||(26700572-26700685)
chr7 (88-245)||(34519559-34519716)
chr7 (84-245)||(36769452-36769613)
chr7 (88-245)||(44748746-44748903)
chr7 (89-245)||(1870186-1870342)
chr7 (88-203)||(26371696-26371811)
chr7 (88-203)||(48894810-48894925)
chr7 (103-245)||(26910312-26910454)
chr7 (132-245)||(329521-329634)
chr7 (88-245)||(30849133-30849290)
chr7 (89-201)||(9913619-9913731)
chr7 (89-201)||(9927307-9927419)
chr7 (132-252)||(23349222-23349342)
chr7 (87-202)||(37967068-37967183)
chr7 (88-203)||(40753248-40753363)
chr7 (215-249)||(32873783-32873817)
chr7 (88-186)||(34295298-34295396)
chr7 (89-249)||(1363683-1363843)
chr7 (88-204)||(22723919-22724035)
chr7 (216-252)||(42332103-42332139)
chr7 (90-203)||(18470777-18470888)
chr7 (84-153)||(3891925-3891994)
chr7 (217-249)||(17237123-17237155)
[»] chr6 (30 HSPs)
chr6 (88-245)||(24203409-24203566)
chr6 (88-252)||(3379750-3379914)
chr6 (88-242)||(3259733-3259887)
chr6 (88-249)||(11279171-11279332)
chr6 (88-249)||(11382107-11382266)
chr6 (79-249)||(32860094-32860264)
chr6 (88-205)||(10485244-10485361)
chr6 (80-245)||(18597075-18597240)
chr6 (88-245)||(10960047-10960204)
chr6 (83-154)||(14807938-14808009)
chr6 (88-203)||(15277205-15277320)
chr6 (89-203)||(15276863-15276977)
chr6 (88-245)||(166848-167005)
chr6 (88-249)||(10324036-10324197)
chr6 (88-245)||(11613716-11613873)
chr6 (88-205)||(11675299-11675416)
chr6 (88-245)||(32409777-32409934)
chr6 (85-245)||(2614943-2615103)
chr6 (88-154)||(23636361-23636427)
chr6 (88-177)||(18057634-18057723)
chr6 (132-245)||(32132349-32132462)
chr6 (88-203)||(3932732-3932847)
chr6 (88-203)||(17867924-17868039)
chr6 (88-203)||(17877707-17877822)
chr6 (88-154)||(14925142-14925208)
chr6 (88-249)||(7396051-7396211)
chr6 (88-249)||(11212300-11212461)
chr6 (83-140)||(34402940-34402997)
chr6 (88-152)||(3290799-3290863)
chr6 (88-154)||(31870022-31870088)
[»] chr5 (32 HSPs)
chr5 (88-245)||(4689590-4689747)
chr5 (88-245)||(3735404-3735561)
chr5 (88-245)||(8136884-8137041)
chr5 (89-249)||(41790356-41790515)
chr5 (88-249)||(39918550-39918711)
chr5 (82-245)||(553444-553607)
chr5 (82-245)||(32528762-32528925)
chr5 (88-245)||(7770171-7770328)
chr5 (88-245)||(11963388-11963545)
chr5 (88-245)||(34794934-34795091)
chr5 (80-245)||(39788240-39788405)
chr5 (85-245)||(7523219-7523379)
chr5 (88-200)||(27838966-27839078)
chr5 (88-203)||(24181516-24181631)
chr5 (88-245)||(31770483-31770640)
chr5 (89-249)||(7208123-7208283)
chr5 (88-244)||(35701325-35701481)
chr5 (87-245)||(32092873-32093030)
chr5 (88-206)||(37148481-37148599)
chr5 (88-186)||(41459694-41459792)
chr5 (88-245)||(2351727-2351884)
chr5 (88-205)||(8560874-8560991)
chr5 (89-206)||(18470321-18470438)
chr5 (88-200)||(4664923-4665035)
chr5 (88-200)||(29241470-29241582)
chr5 (80-249)||(5598523-5598692)
chr5 (132-245)||(21739097-21739210)
chr5 (218-249)||(700623-700654)
chr5 (88-203)||(31879968-31880083)
chr5 (84-154)||(7725697-7725767)
chr5 (142-206)||(35955085-35955149)
chr5 (82-126)||(40182554-40182598)
[»] chr4 (56 HSPs)
chr4 (88-205)||(50178371-50178488)
chr4 (85-245)||(39078711-39078871)
chr4 (88-245)||(44649043-44649200)
chr4 (88-249)||(50729421-50729582)
chr4 (88-246)||(22318263-22318421)
chr4 (83-249)||(25978486-25978651)
chr4 (88-245)||(2725012-2725169)
chr4 (88-245)||(44324221-44324378)
chr4 (88-245)||(33176911-33177068)
chr4 (88-245)||(50727792-50727949)
chr4 (88-245)||(50735806-50735963)
chr4 (84-154)||(13110447-13110517)
chr4 (83-245)||(20802405-20802567)
chr4 (88-246)||(38486136-38486294)
chr4 (88-245)||(3649686-3649843)
chr4 (88-249)||(21580072-21580232)
chr4 (88-245)||(52949770-52949927)
chr4 (85-245)||(20694421-20694581)
chr4 (88-252)||(29592938-29593102)
chr4 (84-203)||(24210411-24210530)
chr4 (88-205)||(11056132-11056249)
chr4 (88-249)||(12600932-12601093)
chr4 (132-245)||(21202789-21202902)
chr4 (88-245)||(23521930-23522087)
chr4 (88-245)||(24002389-24002546)
chr4 (88-245)||(36497267-36497424)
chr4 (88-245)||(38812570-38812727)
chr4 (88-249)||(46680389-46680550)
chr4 (88-200)||(47361292-47361405)
chr4 (88-203)||(29616257-29616373)
chr4 (88-203)||(55593977-55594093)
chr4 (88-203)||(1231403-1231518)
chr4 (88-203)||(2629830-2629945)
chr4 (88-203)||(6973792-6973907)
chr4 (88-203)||(36886024-36886139)
chr4 (88-201)||(20517900-20518014)
chr4 (88-245)||(29785415-29785573)
chr4 (99-245)||(42772838-42772984)
chr4 (84-141)||(2114190-2114247)
chr4 (88-245)||(6776628-6776785)
chr4 (88-245)||(9512219-9512376)
chr4 (88-245)||(56154671-56154828)
chr4 (89-252)||(28115295-28115457)
chr4 (83-203)||(42870063-42870183)
chr4 (88-203)||(9807247-9807362)
chr4 (88-203)||(54543081-54543195)
chr4 (83-126)||(56487161-56487204)
chr4 (88-154)||(7554836-7554902)
chr4 (88-242)||(49151979-49152133)
chr4 (132-245)||(37865803-37865916)
chr4 (88-203)||(2787056-2787171)
chr4 (88-203)||(4325883-4325998)
chr4 (88-203)||(14296659-14296774)
chr4 (88-203)||(14314907-14315022)
chr4 (79-201)||(44640417-44640538)
chr4 (130-203)||(34930007-34930080)
[»] chr3 (43 HSPs)
chr3 (88-249)||(33364658-33364819)
chr3 (79-205)||(31882893-31883019)
chr3 (88-245)||(51925088-51925245)
chr3 (88-205)||(41682933-41683050)
chr3 (86-249)||(1344585-1344748)
chr3 (88-203)||(3695187-3695302)
chr3 (90-249)||(19906806-19906965)
chr3 (88-203)||(51259660-51259775)
chr3 (88-245)||(3964336-3964493)
chr3 (84-245)||(24571329-24571490)
chr3 (88-245)||(29584923-29585080)
chr3 (88-203)||(12349051-12349166)
chr3 (88-203)||(20255134-20255249)
chr3 (88-249)||(21221241-21221401)
chr3 (88-245)||(39052718-39052875)
chr3 (88-249)||(40094547-40094708)
chr3 (88-201)||(50386336-50386449)
chr3 (88-200)||(22484623-22484735)
chr3 (88-245)||(3864557-3864712)
chr3 (88-186)||(5442386-5442484)
chr3 (88-249)||(50678842-50679003)
chr3 (88-245)||(2135118-2135275)
chr3 (88-245)||(3867529-3867686)
chr3 (88-205)||(10747288-10747405)
chr3 (84-245)||(21373978-21374139)
chr3 (89-154)||(54622678-54622743)
chr3 (88-252)||(24721526-24721690)
chr3 (89-245)||(42636284-42636440)
chr3 (88-203)||(44117029-44117144)
chr3 (99-249)||(25860312-25860462)
chr3 (88-245)||(49748791-49748948)
chr3 (88-245)||(51296629-51296784)
chr3 (88-245)||(28675838-28675995)
chr3 (88-205)||(45690786-45690903)
chr3 (89-249)||(53557676-53557836)
chr3 (88-203)||(25927207-25927322)
chr3 (88-203)||(38213444-38213559)
chr3 (93-245)||(34026715-34026867)
chr3 (88-154)||(43175614-43175680)
chr3 (89-202)||(29646157-29646270)
chr3 (400-432)||(1072578-1072610)
chr3 (40-72)||(1073204-1073236)
chr3 (88-204)||(6179515-6179631)
[»] chr1 (45 HSPs)
chr1 (88-245)||(31004188-31004345)
chr1 (88-205)||(42512731-42512848)
chr1 (88-245)||(15539851-15540008)
chr1 (88-245)||(26764756-26764913)
chr1 (85-204)||(6143944-6144063)
chr1 (88-245)||(1351396-1351553)
chr1 (88-205)||(50304747-50304864)
chr1 (91-203)||(26118179-26118291)
chr1 (85-245)||(32270409-32270569)
chr1 (88-244)||(35387272-35387428)
chr1 (118-248)||(13994066-13994196)
chr1 (88-186)||(21071729-21071827)
chr1 (88-249)||(41967809-41967971)
chr1 (88-245)||(844685-844842)
chr1 (88-245)||(6711007-6711164)
chr1 (88-249)||(41972963-41973124)
chr1 (88-245)||(45490836-45490993)
chr1 (88-245)||(51264551-51264708)
chr1 (81-205)||(8838993-8839117)
chr1 (89-245)||(17888004-17888160)
chr1 (118-245)||(6029292-6029419)
chr1 (84-154)||(46155054-46155124)
chr1 (88-245)||(7183974-7184131)
chr1 (88-245)||(11772593-11772750)
chr1 (88-245)||(44738003-44738160)
chr1 (89-245)||(16437418-16437574)
chr1 (88-252)||(16451176-16451340)
chr1 (88-244)||(32289305-32289461)
chr1 (88-203)||(24339599-24339714)
chr1 (83-245)||(5109784-5109946)
chr1 (88-154)||(38663254-38663320)
chr1 (90-250)||(7837184-7837345)
chr1 (132-245)||(50540400-50540513)
chr1 (118-202)||(16704825-16704909)
chr1 (88-248)||(17327610-17327770)
chr1 (80-203)||(39281992-39282115)
chr1 (88-203)||(42510623-42510738)
chr1 (82-252)||(1601222-1601389)
chr1 (179-245)||(50382455-50382521)
chr1 (88-249)||(28340265-28340425)
chr1 (88-245)||(45658877-45659034)
chr1 (89-203)||(30105641-30105756)
chr1 (88-154)||(51703124-51703191)
chr1 (88-154)||(40811332-40811398)
chr1 (223-252)||(40856196-40856225)
[»] chr2 (44 HSPs)
chr2 (80-252)||(41365988-41366160)
chr2 (88-245)||(6896215-6896372)
chr2 (84-248)||(10399752-10399916)
chr2 (88-242)||(32766390-32766544)
chr2 (88-249)||(7761459-7761620)
chr2 (84-252)||(33366650-33366818)
chr2 (79-245)||(34338857-34339023)
chr2 (84-249)||(16177765-16177930)
chr2 (84-252)||(38623186-38623354)
chr2 (93-249)||(40832360-40832516)
chr2 (88-203)||(18685925-18686040)
chr2 (88-203)||(32498004-32498119)
chr2 (83-245)||(37308702-37308865)
chr2 (88-154)||(28824443-28824509)
chr2 (84-242)||(42365627-42365785)
chr2 (88-249)||(7258940-7259101)
chr2 (88-245)||(9732816-9732973)
chr2 (88-245)||(17540762-17540919)
chr2 (84-201)||(39461405-39461522)
chr2 (88-249)||(44284672-44284833)
chr2 (88-244)||(3913346-3913502)
chr2 (88-245)||(33889290-33889447)
chr2 (88-252)||(2644973-2645136)
chr2 (83-203)||(38992952-38993072)
chr2 (88-203)||(30326218-30326333)
chr2 (90-185)||(37863254-37863349)
chr2 (88-203)||(40692386-40692501)
chr2 (84-154)||(11115008-11115078)
chr2 (88-206)||(30712946-30713064)
chr2 (132-249)||(16104317-16104434)
chr2 (99-244)||(26981606-26981751)
chr2 (88-201)||(30798375-30798487)
chr2 (89-245)||(35114832-35114988)
chr2 (88-203)||(5278721-5278835)
chr2 (88-245)||(19513574-19513732)
chr2 (88-157)||(37003777-37003846)
chr2 (132-252)||(42706399-42706519)
chr2 (88-186)||(2086169-2086266)
chr2 (218-252)||(4641556-4641590)
chr2 (88-154)||(9717339-9717405)
chr2 (88-154)||(12939204-12939270)
chr2 (88-242)||(27462688-27462842)
chr2 (89-126)||(18793180-18793217)
chr2 (343-403)||(11114761-11114821)
[»] scaffold0050 (1 HSPs)
scaffold0050 (84-245)||(42839-42999)
[»] scaffold0650 (1 HSPs)
scaffold0650 (88-245)||(1535-1692)
[»] scaffold0027 (1 HSPs)
scaffold0027 (88-249)||(15215-15376)
[»] scaffold0025 (1 HSPs)
scaffold0025 (89-201)||(5332-5444)
[»] scaffold0280 (1 HSPs)
scaffold0280 (88-245)||(13579-13736)
[»] scaffold0054 (1 HSPs)
scaffold0054 (88-245)||(23622-23779)
[»] scaffold0729 (1 HSPs)
scaffold0729 (88-245)||(4471-4628)
[»] scaffold0169 (1 HSPs)
scaffold0169 (132-245)||(17990-18103)
[»] scaffold0098 (1 HSPs)
scaffold0098 (88-154)||(51576-51642)
[»] scaffold0014 (1 HSPs)
scaffold0014 (88-154)||(102087-102153)
[»] scaffold0208 (1 HSPs)
scaffold0208 (88-245)||(2231-2387)


Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 10656500 - 10656748
Alignment:
Q  1 taagataaaattgagccatatcaatgttgatatttgcgtttagtttaagctttgaagcaaattgccccacatcaattgctagagtgtgtttgatttgcta 100  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10656500 taagataaaagtgagtcatatcaatgttgatatgtgcgtttagtttaagctttgaagcaaattgccccacatcaattgctagagtgtgtttgatttgcta 10656599  T
Q  101 aaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaa 200  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  10656600 aaaaatgaaggacatgtcagaacaacctcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaactagaggcaaaagacaggacaaaa 10656699  T
Q  201 actgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||||        ||||||| |||||||||||||||||||||||||||    
T  10656700 actgaattttttgtccttcacaaaaccacaacacaactttttgtctcac 10656748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 15001670 - 15001513
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | ||||||||| ||| ||||||||| ||||||||||||| || ||| || |||| ||||||| ||||||||     
T  15001670 gtttgatttgataaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaat 15001571  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||||| ||||||||||||        || ||||||||||||||||||||||||||||    
T  15001570 agacagaacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtc 15001513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 41548822 - 41548705
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||| ||||||||||||||||| |||| | ||||||||| ||| ||||||||| ||||||||||||| || ||| ||| ||||||||||| ||||||||     
T  41548822 gtttaatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagatacatgacaaactggaggcaag 41548723  T
Q  188 agacaggacaaaaactga 205  Q
    ||||||||||||||||||    
T  41548722 agacaggacaaaaactga 41548705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 29610956 - 29611113
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||||| ||||||||| ||| ||||||| | ||||||||||||| || ||| || ||||  |||||| ||||||||     
T  29610956 gtttgatttgttaaaaaatgaaggacatgacagaacaacttcagttgtccaatgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaag 29611055  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||||||        || || |||||||||||||||||||||||||    
T  29611056 ggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtc 29611113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 37618293 - 37618454
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||| |||||||| |||||| |||||||||  || |||||| || ||||||||||||| || ||| ||  ||| ||||||  |||||||||    
T  37618293 gtttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaaa 37618392  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||||||||||||||||         || ||||||||||||||||||||||||||||||||    
T  37618393 ggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcac 37618454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 252
Target Start/End: Complemental strand, 40389245 - 40389080
Alignment:
Q  87 tgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||| |||||||| |||||| |||||||||  || ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||    
T  40389245 tgtttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 40389146  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
    | |||||||||||||||||         |  ||||||||||||| |||||||||||||| ||||||    
T  40389145 aggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactttttgtcccacata 40389080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 241
Target Start/End: Original strand, 30542914 - 30543076
Alignment:
Q  79 ctagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaacc 178  Q
    |||| ||| |||||||||||||||||||||| |||||| || |||||| | | ||||||||| ||||||||||||| || ||| ||  |||||||||||     
T  30542914 ctagggtgcgtttgatttgctaaaaaatgaaggacatgacataacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaact 30543013  T
Q  179 ggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttt 241  Q
    ||||||||  ||||||||||||||| |         || ||||||||||||||||||||||||    
T  30543014 ggaggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 30543076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 7591348 - 7591465
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||| |||||||||||||||| |||| | ||||||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  7591348 gtttgttttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 7591447  T
Q  188 agacaggacaaaaactga 205  Q
    ||||||||||||||||||    
T  7591448 agacaggacaaaaactga 7591465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 22999462 - 22999345
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||  |  ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  22999462 gtttgatttgctaaaaaatgaaggacatgacagaacaactccggttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 22999363  T
Q  188 agacaggacaaaaactga 205  Q
    ||||||||||||||||||    
T  22999362 agacaggacaaaaactga 22999345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 37474904 - 37474789
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || ||| |||||||||  || ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  37474904 gtttgatttgctaaaaaatgaaggatatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 37474805  T
Q  188 agacaggacaaaaact 203  Q
    ||||||||||||||||    
T  37474804 agacaggacaaaaact 37474789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 30501349 - 30501235
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  30501349 gtttgatttgctaaaaaatgaaggacatggcagaacaacttcagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 30501250  T
Q  188 agacaggacaaaaac 202  Q
     ||||||||||||||    
T  30501249 ggacaggacaaaaac 30501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 81 - 203
Target Start/End: Complemental strand, 34063339 - 34063217
Alignment:
Q  81 agagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccgg 180  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||    
T  34063339 agagtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactctttcaggtacaggacaaactgg 34063240  T
Q  181 aggcaaaagacaggacaaaaact 203  Q
    ||||||  |||||||||||||||    
T  34063239 aggcaagggacaggacaaaaact 34063217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 8672956 - 8673113
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||||||||||| ||||||||     
T  8672956 gtttgatttgctaaaaaatgaaggacaggacaaaacaactatagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag 8673055  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  8673056 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 8673113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 10467268 - 10467151
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||||||  ||| ||||||| ||||||||     
T  10467268 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaag 10467169  T
Q  188 agacaggacaaaaactga 205  Q
    ||||| ||||||||||||    
T  10467168 agacaagacaaaaactga 10467151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 39643087 - 39642930
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| ||||||||| ||| ||||||||| |||||||| |||| || ||| ||  ||| ||||||| ||||||||     
T  39643087 gtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttttaaaactgtttcaggtacaggacaaactggaggcaag 39642988  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| || |||||||||         || ||||||||||||||||||||||| ||||    
T  39642987 ggacaagataaaaactgatatttttgtccctcaccaaaccacaacacaactttctgtc 39642930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 41709981 - 41709824
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||||||    
T  41709981 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaa 41709882  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  41709881 tgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 41709824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 252
Target Start/End: Original strand, 12753219 - 12753390
Alignment:
Q  81 agagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccgg 180  Q
    ||||||||||||||||||||||||||||| |||| | || ||||||   | ||||||||| ||||||||||||  || ||| ||  ||| ||||||| |     
T  12753219 agagtgtgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaagactgtttcaggtacaggacaaactga 12753318  T
Q  181 aggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
    ||||||| |||| |||||||||| |          | |||||||||||||||||||||||||||| ||||||    
T  12753319 aggcaaatgacaagacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttgtcccacata 12753390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 7394715 - 7394876
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||  ||| || ||| ||  |||||||||||  |||||||     
T  7394715 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttacaaaactgtttcaggtacatgacaaactagaggcaag 7394814  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||| |||||||||| |         || ||||||||||| ||||||||||||||||||||    
T  7394815 ggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcac 7394876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 14004945 - 14005102
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || | | || |||||  | | ||||||||||||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  14004945 gtttgatttgctaaaaaatgaaggataggacataacaattttagttgtccagtatttgatttgtaaaactgtttgaggtacaggacaaactggaggcaag 14005044  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| |||||||||| |         || ||||||||||||||||||||||||||||    
T  14005045 ggacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttttgtc 14005102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 31513484 - 31513641
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | || |||||| |||||||||||||  | ||| ||  | ||||||||| ||||||||     
T  31513484 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaattgtttcaggtagatgacaaactggaggcaag 31513583  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  31513584 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 31513641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 17520802 - 17520635
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||| ||||||||||||||||| |||||| |||||||||  || |||||| || |||||||||||||  | ||||||   ||||| |||  |||||    
T  17520802 gtgtgtttaatttgctaaaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaagtgttttaggtgcatgataaaatggagg 17520703  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
    |||  |||||| ||||||||  |        || |||||||||||||||||||||||||||| ||||||    
T  17520702 caagggacagggcaaaaact-tatattttgtccctcaccaaaccacaacacaactttttgtcccacata 17520635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 4052684 - 4052527
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||  ||||||||     
T  4052684 gtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaag 4052585  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  4052584 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 4052527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 6386780 - 6386619
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| ||||   || ||||||   | ||||||||| |||||||| |||| || ||| ||  | | ||||||| ||||| |||    
T  6386780 gtttgatttgctaaaaaatgaaggacaaaacataacaactgtagttgtccagtgtttgatttataaaactgtttcaggtataggacaaactggaggtaaa 6386681  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||| |||||||||||| |         || ||||||||||||||||||||||||||||||||    
T  6386680 agataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcac 6386619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 35225866 - 35225709
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| || | | |||||||||  || ||||||||| |||| |||||||| |  ||| || |||| ||||||| ||||||||     
T  35225866 gtttgatttgataaaaaatgaaggataggacagaacaactccagttgtccagtgtttggtttgtaaaacagtttcagggacaggacaaactggaggcaag 35225767  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||||||||||||||| |        || || |||||||||| ||||||||||||||    
T  35225766 ggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtc 35225709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 34101712 - 34101597
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  34101712 gtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 34101613  T
Q  188 agacaggacaaaaact 203  Q
     ||||  |||||||||    
T  34101612 ggacaacacaaaaact 34101597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 5968765 - 5968919
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||| ||||||||||||||||| || | | || ||||||   | ||||||||| ||||||||||||| || ||| ||  |||||||||||  |||||||     
T  5968765 gtttaatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacatgacaaactagaggcaag 5968864  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaacttttt 242  Q
     ||||||||||||||| |         |||||||||||||||| |||||||||||    
T  5968865 ggacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaacttttt 5968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 10656835 - 10656904
Alignment:
Q  336 tcatgcgttgttatgttttgtgttgcattgttctgtcttgtactattatgttca--atacttattgtttt 403  Q
    |||| ||||||||||| ||||||||  ||||||| |||||||||||||||||||  ||||||||||||||    
T  10656835 tcatacgttgttatgtcttgtgttgtgttgttctctcttgtactattatgttcaatatacttattgtttt 10656904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 31732254 - 31732188
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||| | ||||||||| | | ||||||||| |||||||||||||    
T  31732254 gtttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaa 31732188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 16485710 - 16485867
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| |||| |||||| ||||||  |||||||  ||| ||||||||| |||||||||||||    ||| || |||||||||||  | |||||||    
T  16485710 gtttgatttgataaagaatgaaggacatgatagaacaatttcagttgtccagtgtttgatttgtaaaatagtttcagggacatgacaaattgaaggcaaa 16485809  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||| |||||||||| |        || || |||||||||| ||||||||||||||    
T  16485810 ggacagaacaaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtc 16485867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 29672223 - 29672381
Alignment:
Q  88 gtttgatttgcta-aaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    ||||||||||||  ||||||||| |||| | |||||||||   | ||||||||| ||||||| ||||| || ||| ||  ||| |||||||  |||||||    
T  29672223 gtttgatttgctttaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactagaggcaa 29672322  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
      ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  29672323 gggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 29672381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 37664183 - 37664341
Alignment:
Q  88 gtttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||| |||| |||| | ||||| |||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||  |||||||    
T  37664183 gtttgatttgctaaaaaaatgaaggacaggacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaa 37664282  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
      ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  37664283 gggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 37664341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 38047550 - 38047484
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| |||||||||||||    
T  38047550 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaa 38047484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 3251557 - 3251672
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || || | | |||||||||   | ||||||||| |||||||| |||| || ||| ||  ||| ||||||| ||||||||     
T  3251557 gtttgatttgctaaaaaataaaggataagacagaacaactctagttgtccagtgtttgatttataaaactgtttcaggtacaggacaaactggaggcaag 3251656  T
Q  188 agacaggacaaaaact 203  Q
     ||||| |||||||||    
T  3251657 cgacagaacaaaaact 3251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 25478447 - 25478332
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || ||||||   | ||||||||| ||| ||||||||| || ||| ||  ||| ||||||| |||| |||     
T  25478447 gtttgatttgctaaaaaatgaaggacaggacataacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagacaag 25478348  T
Q  188 agacaggacaaaaact 203  Q
     ||||||| |||||||    
T  25478347 ggacaggaaaaaaact 25478332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 27104163 - 27104048
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| ||||   |||||||||   | |||| || | ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  27104163 gtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 27104064  T
Q  188 agacaggacaaaaact 203  Q
     |||| ||||||||||    
T  27104063 ggacatgacaaaaact 27104048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 45114264 - 45114193
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||| |||||||||||||||| ||||| |||| | ||  ||||| |||||||| |||| |||||||||||||    
T  45114264 agtgcgtttgatttgctaaaacatgaaggacaggacatgacaacttcaattgttcagtgtttgatttgtaaa 45114193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 21272871 - 21272805
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    ||||||||||||||| |||||| |||| |  |||||||| | | ||||||||| |||||||||||||    
T  21272871 gtttgatttgctaaagaatgaatgacacgagagaacaactttagttgtccagtgtttgatttgtaaa 21272805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 5892222 - 5892154
Alignment:
Q  138 agtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaa 206  Q
    ||||||| ||||||||| || |||||||||||||||||||  || | |  ||||| |||||||||||||    
T  5892222 agtattttatttgtaaaactattttagagacatgacaaactagacgaacgagacaagacaaaaactgaa 5892154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 21785079 - 21784922
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | |||| |||| ||||||||||||| || ||| ||  ||||||||||| ||||||||     
T  21785079 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggcacatgacaaactggaggcaag 21784980  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  21784979 agacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 21784922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 38301551 - 38301393
Alignment:
Q  88 gtttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||| |||| |||| | |||||||||  |||||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||    
T  38301551 gtttgatttgctaaaaaaatgaaggacaggacagaacaactccaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 38301452  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||||||         || ||| ||||||||||||||||||||||||    
T  38301451 gagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtc 38301393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 251
Target Start/End: Original strand, 47316585 - 47316748
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || ||| ||||| |||   | ||||||||| |||||||||||||  | ||| ||  ||| ||||||| ||||||||     
T  47316585 gtttgatttgctaaaaaatgaaggatatgacagaataactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaag 47316684  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacat 251  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||||||||    
T  47316685 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacat 47316748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 245
Target Start/End: Original strand, 43158564 - 43158730
Alignment:
Q  79 ctagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaacc 178  Q
    |||| ||| |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||     
T  43158564 ctagggtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 43158663  T
Q  179 ggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||  ||||||||||||||| |         || | ||||||||||||||||||||||||||    
T  43158664 ggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtc 43158730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 26994112 - 26994269
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||||||||||| ||||||||     
T  26994112 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag 26994211  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||||||||||| || |         || ||||||||||||| ||||||||||||||    
T  26994212 ggacaggacaaaatctcatatttttgtccctcaccaaaccacagcacaactttttgtc 26994269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 43368409 - 43368292
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||  || ||||||||| ||||||||||||| || ||| ||  | | ||||||| ||||||||     
T  43368409 gtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaag 43368310  T
Q  188 agacaggacaaaaactga 205  Q
    |||| |||||||||||||    
T  43368309 agacgggacaaaaactga 43368292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 18386736 - 18386620
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||||||||||||||| |||| | ||||||||    | ||||||||| ||||||||||||| || ||| ||  ||||||||||| |||||    
T  18386736 gtgtgtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggagg 18386637  T
Q  184 caaaagacaggacaaaa 200  Q
    |||  ||||||||||||    
T  18386636 caagggacaggacaaaa 18386620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 10932444 - 10932601
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | |||| |||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  10932444 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 10932543  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||| ||||||||||||||||||    
T  10932544 ggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtc 10932601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 11250825 - 11250668
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||| |||||||||  | ||| ||  ||| ||||||| ||||||||     
T  11250825 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttcatttgtaaaattgtttcaggtacaggacaaactggaggcaag 11250726  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||| | |         || ||||||||||||||||||||||||||||    
T  11250725 ggacaggacaaaaaatcatatttttgtccctcaccaaaccacaacacaactttttgtc 11250668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 47953398 - 47953241
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  47953398 gtttgatttgctaaaaaatgaacgacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 47953299  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| |||||||||| |         || ||||||||||||| ||||||||||||||    
T  47953298 ggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 47953241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 252
Target Start/End: Original strand, 43213812 - 43213976
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||||||  ||| | ||||||||| ||| ||||| ||| ||||||||||||| || ||||    ||| ||||||| | ||||||     
T  43213812 gtttgatttgctaaaaaatgaagaacaggacagaacaacttcagttgtctagtgtttgatttgtaaaactgttttcagtacaggacaaactgaaggcaag 43213911  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
     |||| || |||| ||||         ||||||||||||||||||||||||||||||| ||||||    
T  43213912 ggacaagataaaagctgatatttttgtccttcaccaaaccacaacacaactttttgtcccacata 43213976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 46633900 - 46633796
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||| ||| ||||||| ||||| | |    
T  46633900 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggaaca 46633801  T
Q  188 agaca 192  Q
    |||||    
T  46633800 agaca 46633796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 3922590 - 3922705
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||| ||||||||| || ||| ||  ||| ||||||| ||||||||     
T  3922590 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaag 3922689  T
Q  188 agacaggacaaaaact 203  Q
     |||| ||||||||||    
T  3922690 ggacaagacaaaaact 3922705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 16963346 - 16963231
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | |||||||||   ||||||||||| ||||||||||||| || ||| ||  |||||||||||  |||||||     
T  16963346 gtttgatttgttaaaaaatgaaggacaggacagaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaag 16963247  T
Q  188 agacaggacaaaaact 203  Q
     || ||||||||||||    
T  16963246 ggataggacaaaaact 16963231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 17237293 - 17237218
Alignment:
Q  79 ctagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||| ||| |||||||||||||||||||||| |||||| |||||||||  || ||||||||| |||||||||||||    
T  17237293 ctagggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaa 17237218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 41211087 - 41211244
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaa-ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||||||| |||| | ||||||||| |||| ||| ||||| ||||||||||||| || ||| ||  ||| |||||||  |||||||    
T  41211087 gtttgatttgctaaaaaatgaaggacaggacagaacaac-tcaagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactagaggcaa 41211185  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
      ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  41211186 gggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 41211244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 11321772 - 11321929
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||||||  ||||| |||||||||   | ||||||| | ||||||||||||| ||  || ||  ||| ||||||| ||||||||     
T  11321772 gtttgatttgctaaaaaatgaagaacatgacagaacaactctagttgtccaatgtttgatttgtaaaactgattcaggtacaggacaaactggaggcaac 11321871  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  11321872 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 11321929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 20127497 - 20127380
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||| |||||||||| | | |||||||||  || ||||||||| |||||||| |||| || ||| ||  ||| ||||||| ||||||||     
T  20127497 gtttgatttgctaataaatgaaagataggacagaacaactccagttgtccagtgtttgatttttaaaactatttcaggtacaggacaaactggaggcaag 20127398  T
Q  188 agacaggacaaaaactga 205  Q
     |||||||||||| ||||    
T  20127397 ggacaggacaaaagctga 20127380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 26700685 - 26700572
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||||| || |||||   || ||||||||| ||||||||||| | || ||| ||  ||||||||||| ||||||||     
T  26700685 gtttgatttggtaaaaaatgaaggacatgacataacaattccagttgtccagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaag 26700586  T
Q  188 agacaggacaaaaa 201  Q
    ||| ||||||||||    
T  26700585 agaaaggacaaaaa 26700572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 34519716 - 34519559
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||  |||||||| || |||| | ||||||||| ||| ||||||||| || || ||||||| |  ||| || |||||||||| | ||||||||     
T  34519716 gtttgatttaataaaaaataaaggacaggacagaacaacttcagttgtccagtgttcgaattgtaaaacagtttcagggacatgacaagctggaggcaag 34519617  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||||||||||||||| |        || || |||||||||||||||||||||||||    
T  34519616 ggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtc 34519559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 245
Target Start/End: Original strand, 36769452 - 36769613
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||||||||||||||| ||||    ||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||  ||||    
T  36769452 gtgtgtttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagagg 36769551  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||  ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  36769552 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 36769613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 44748903 - 44748746
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | || ||||||   | ||||||||| ||||||||||||| || ||| ||  |||||||||||  |||||||     
T  44748903 gtttgatttgctaaaaaataaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaag 44748804  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||| ||||||||| ||        || |||||||||||||| |||||||||||||    
T  44748803 ggacagaacaaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtc 44748746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 1870342 - 1870186
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| ||||   |||||||||   | |||| |||| ||||||||||||| || ||| ||  ||| || |||| ||||||||      
T  1870342 tttgatttgctaaaaaatgaaggacagtgcagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagg 1870243  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  1870242 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 1870186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 26371696 - 26371811
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || | | |||||||||   | ||||||||| ||||||||| ||| || ||| ||  ||| ||||||| ||||||||     
T  26371696 gtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgcaaaactatttcaggtacaggacaaactggaggcaag 26371795  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  26371796 ggacaggacaaaaact 26371811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 48894925 - 48894810
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||  || ||||||||| |||||||||||||  | ||| ||  |||  |||||| ||| ||||     
T  48894925 gtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgtttcaggtacagtacaaactggatgcaag 48894826  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  48894825 ggacaggacaaaaact 48894810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 245
Target Start/End: Original strand, 26910312 - 26910454
Alignment:
Q  103 aaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaac 202  Q
    ||||||| |||||| |||||||||  || ||||||||| ||||||||||||| |  ||| || |||| | ||||| ||||||||  ||||||| ||||||    
T  26910312 aaatgaaggacatgacagaacaactacagttgtccagtgtttgatttgtaaaacagtttcagggacagggcaaactggaggcaagggacaggataaaaac 26910411  T
Q  203 tgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    || |        || || |||||||||||||||||||||||||    
T  26910412 tgcaatttttgtccctcgccaaaccacaacacaactttttgtc 26910454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 329634 - 329521
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    |||||| || ||||||||||||| || ||| || ||||  |||||| ||||||||| |||| |||||||||||||        || |||||||||||||     
T  329634 ttgtcccgtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacat 329535  T
Q  232 cacaactttttgtc 245  Q
    ||||||||||||||    
T  329534 cacaactttttgtc 329521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 30849133 - 30849290
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | ||||||||    | ||||||| |  |||||||||||| || ||||||  ||| ||||||| || |||||     
T  30849133 gtttgatttgttaaaaaatgaaggacaagacagaacaattctagttgtccaatgattgatttgtaaaactgttttaggtacaggacaaactggtggcaag 30849232  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  30849233 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 30849290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 9913731 - 9913619
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| |||| | |||||||||  || |||||| || ||||||||||||| || ||| ||  ||| || ||||  |||||||      
T  9913731 tttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaactagaggcaagg 9913632  T
Q  189 gacaggacaaaaa 201  Q
    |||||||||||||    
T  9913631 gacaggacaaaaa 9913619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 9927419 - 9927307
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| |||| | |||||||||  || |||||| || ||||||||||||| || ||| ||  ||| || ||||  |||||||      
T  9927419 tttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccggtgtttgatttgtaaaactatttcaggtacaggataaactagaggcaagg 9927320  T
Q  189 gacaggacaaaaa 201  Q
    |||||||||||||    
T  9927319 gacaggacaaaaa 9927307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 23349222 - 23349342
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||| ||||||| || ||| |   ||||||||||| ||||||||  ||||| |||||||||||         || ||||||||||||||    
T  23349222 ttgtccagtgtttgaattgtaaaactatttcaagtacatgacaaactggaggcaagggacagaacaaaaactgatatttttgtccctcaccaaaccacaa 23349321  T
Q  232 cacaactttttgtctcacata 252  Q
    |||||||||||||| ||||||    
T  23349322 cacaactttttgtcccacata 23349342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 37967183 - 37967068
Alignment:
Q  87 tgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    ||||||||||||||||||||||| |||||| || |||||| | | || ||| || ||||||||||||| || ||| ||  ||||||||||  ||| ||||    
T  37967183 tgtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttctccggtgtttgatttgtaaaactgtttcaggtacatgacaaattggatgcaa 37967084  T
Q  187 aagacaggacaaaaac 202  Q
      |||| |||||||||    
T  37967083 gggacaagacaaaaac 37967068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 40753363 - 40753248
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| |  |||||| |||||||||     ||||||| | ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  40753363 gtttgatttgctaaaaaataagggacatgacagaacaactctcgttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 40753264  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  40753263 ggacaggacaaaaact 40753248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 32873783 - 32873817
Alignment:
Q  215 ccttcaccaaaccacaacacaactttttgtctcac 249  Q
    |||||||||||||||||||||||||||||||||||    
T  32873783 ccttcaccaaaccacaacacaactttttgtctcac 32873817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 34295298 - 34295396
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||| |||||||||| ||||| | | |||||||||  || || |||||| ||||||||||||| || ||| ||  ||||||||||| ||||||||    
T  34295298 gtttgattagctaaaaaataaaagataggacagaacaactccagttatccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaa 34295396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 1363843 - 1363683
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    |||||||||||||||||| || || | | || |||||| ||| ||||||||| |||||||||||||  | ||| |   ||| ||||||| ||||||||      
T  1363843 tttgatttgctaaaaaataaaggataggacaaaacaacttcagttgtccagtgtttgatttgtaaaattgtttcatgtacaggacaaactggaggcaagg 1363744  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    |||| ||||||| ||||         || ||| ||||||||| ||||||||||||||||||    
T  1363743 gacatgacaaaagctgatatttttgtccctcatcaaaccacatcacaactttttgtctcac 1363683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 22723919 - 22724035
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| ||  || |||||||||  || ||||||||| ||||||||||||| |  ||| || |||  |||||||  |||| ||     
T  22723919 gtttgatttgataaaaaatgaaggatgtgacagaacaactccagttgtccagtgtttgatttgtaaaacagtttcagggaccggacaaactcgaggtaag 22724018  T
Q  188 agacaggacaaaaactg 204  Q
     ||||||||||||||||    
T  22724019 ggacaggacaaaaactg 22724035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 42332139 - 42332103
Alignment:
Q  216 cttcaccaaaccacaacacaactttttgtctcacata 252  Q
    ||||||||||||||| |||||||||||||||||||||    
T  42332139 cttcaccaaaccacatcacaactttttgtctcacata 42332103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 18470888 - 18470777
Alignment:
Q  90 ttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaag 189  Q
    ||||||||||| |||||||| |||| |  ||||||||   | ||||| ||| ||||||||||||| || ||| ||  ||| ||||||| ||||||  |||    
T  18470888 ttgatttgctacaaaatgaaggacaggatagaacaactctagttgtcgagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc--aag 18470791  T
Q  190 acaggacaaaaact 203  Q
    ||||||||||||||    
T  18470790 acaggacaaaaact 18470777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 3891925 - 3891994
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaa 153  Q
    |||| ||||||||||||||||||||| |||| | |||||||||   | ||||||| | ||||||||||||    
T  3891925 gtgtatttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccaatgtttgatttgtaa 3891994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 17237155 - 17237123
Alignment:
Q  217 ttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||| |||||||||||||||||||||||||||    
T  17237155 ttcactaaaccacaacacaactttttgtctcac 17237123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 24203566 - 24203409
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||||||  ||| ||||||| ||||||||     
T  24203566 gtttgatttgctaaaaaatgaaggacatgacagaacaactatagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaag 24203467  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  24203466 agacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 24203409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 252
Target Start/End: Complemental strand, 3379914 - 3379750
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| ||||||  |||||||| | | ||||||||| |||||||| |||| || ||| ||| ||| ||||||| ||||||||     
T  3379914 gtttgatttgctaaaaaatgaaggacatgatagaacaactttagttgtccagtgtttgatttataaaactgtttcagatacaggacaaactggaggcaag 3379815  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
    ||||| ||||||||||||         |  ||||||||||| | |||||||||||||||||||||    
T  3379814 agacaagacaaaaactgatatttttgtcgctcaccaaaccatagcacaactttttgtctcacata 3379750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 242
Target Start/End: Complemental strand, 3259887 - 3259733
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  3259887 gtttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 3259788  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaacttttt 242  Q
    |||||||||||||||| |         || |||||||||||||||||||||||||    
T  3259787 agacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttt 3259733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 11279332 - 11279171
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||||||||||  | |||||||||  || ||||||||| ||||||||||||| || ||| |   ||| ||||||| |||||||      
T  11279332 gtttgatttgctaaaaaatgaaagacgggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcatg 11279233  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||||||    
T  11279232 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcac 11279171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 11382266 - 11382107
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||| ||||||||| || ||| ||  ||| ||||||| ||||||||     
T  11382266 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaag 11382167  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         |  ||||||||||||||||||||||||||||||||    
T  11382166 ggacaggacaaaaactcatatttttgtc--tcaccaaaccacaacacaactttttgtctcac 11382107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 249
Target Start/End: Complemental strand, 32860264 - 32860094
Alignment:
Q  79 ctagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaacc 178  Q
    |||| ||| |||||||||| ||||||||||| |||||| || ||||||  |||||||||||| ||||||||||||| |  ||| || ||||||||||||     
T  32860264 ctagggtgcgtttgatttgataaaaaatgaaggacatgacaaaacaactccaattgtccagtgtttgatttgtaaaacagtttcagggacatgacaaact 32860165  T
Q  179 ggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||||||  |||| ||||||| ||| |        || || |||||||||| |||||| |||||||||||    
T  32860164 ggaggcaagggacatgacaaaagctgcaatttttgtccatcgccaaaccacagcacaaccttttgtctcac 32860094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 10485361 - 10485244
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || ||||||  || ||||||||| |||||||||||||  | ||| ||  ||| ||||||| ||||||||     
T  10485361 gtttgatttgctaaaaaatgaaggacaagacaaaacaactccagttgtccagtgtttgatttgtaaaattatttcaggtacaggacaaactggaggcaag 10485262  T
Q  188 agacaggacaaaaactga 205  Q
    ||||||||||||||||||    
T  10485261 agacaggacaaaaactga 10485244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 245
Target Start/End: Original strand, 18597075 - 18597240
Alignment:
Q  80 tagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccg 179  Q
    ||||||| |||||||||| ||||||||||| |||  |   ||||||  ||| |||| |||| ||||||||||||| || ||| || || |||||||||||    
T  18597075 tagagtgcgtttgatttgttaaaaaatgaaggacgggattgaacaatttcagttgttcagtgtttgatttgtaaaactgtttcagggatatgacaaaccg 18597174  T
Q  180 gaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||||||  |||| ||||||| |||||        || ||||||||||||||||||||||||||||    
T  18597175 gaggcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactttttgtc 18597240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 10960204 - 10960047
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || | | |||||||||  || ||||||||| ||||||||||||| || ||| ||  ||| ||||||| | ||||||     
T  10960204 gtttgatttgctaaaaaatgaaggataggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaag 10960105  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||| ||||||||||||||||||||||||    
T  10960104 ggacaggacaaaaactcatatttttgtccctcaacaaaccacaacacaactttttgtc 10960047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 14807938 - 14808009
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||| |||||||||||||||||||||| |||||| |||||||||  || ||||||||| |||||||||||||    
T  14807938 agtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaa 14808009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 15277205 - 15277320
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||||||||||| | || ||||||   | ||||||||| |||||||||||||  | ||| ||  ||| ||||||| ||||||||     
T  15277205 gtttgatttgctaaaaaatgaaagacaagacaaaacaactctatttgtccagtgtttgatttgtaaaattgtttaaggtacaggacaaactggaggcaag 15277304  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  15277305 ggacaggacaaaaact 15277320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 15276863 - 15276977
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| |||||| |||||||||   | ||||| | | ||||||||||||| || ||| ||  ||| ||||||| ||||||||      
T  15276863 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 15276962  T
Q  189 gacaggacaaaaact 203  Q
    |||||||||||||||    
T  15276963 gacaggacaaaaact 15276977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 166848 - 167005
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || ||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||  |||||||     
T  166848 gtttgatttgctaaaaaatgaaggatatgacagaacaactctacttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaag 166947  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||  ||||||||| |         || ||||||||||||||||||||||||||||    
T  166948 ggacataacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 167005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 10324036 - 10324197
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| ||||   |||||||||   | |||| |||| ||| ||||||||| || ||| ||  ||| |||||||  |||||||     
T  10324036 gtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcagtgtttaatttgtaaaactgtttcaggtacaggacaaactagaggcaag 10324135  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||||||    
T  10324136 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcac 10324197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 11613716 - 11613873
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||||||||| | | ||||||||| ||||||||||||| || ||| ||  ||| ||||||  |||| |||     
T  11613716 gtttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaatggagacaag 11613815  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
      |||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  11613816 gaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 11613873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 11675299 - 11675416
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||  ||||||| | || |||||   || |||| |||| ||||||||||||| || ||| ||  ||| ||||||| |||||||||    
T  11675299 gtttgatttgctaaaaaaataaagacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaa 11675398  T
Q  188 agacaggacaaaaactga 205  Q
     |||||||||||||||||    
T  11675399 ggacaggacaaaaactga 11675416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 32409777 - 32409934
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| ||||| |||   | || |||||| ||||||||||||| || ||| ||  ||| ||||||| |||| |||     
T  32409777 gtttgatttgctaaaaaatgaaggacatgacagaataactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaag 32409876  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  32409877 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 32409934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 245
Target Start/End: Complemental strand, 2615103 - 2614943
Alignment:
Q  85 tgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggc 184  Q
    ||||||||||||||||||||||||| |||| | |||||||||   | ||||||| | |||||||||||||  | ||| ||  ||| ||||||  ||||||    
T  2615103 tgtgtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccactgtttgatttgtaaaattgtttcaggtacaggacaaattggaggc 2615004  T
Q  185 aaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||  ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  2615003 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 2614943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 23636427 - 23636361
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| || ||| ||||||||| ||| |||| |||| |||||||||||||    
T  23636427 gtttgatttgctaaaaaatgaaggatatgacagaacaacttcagttgttcagtgtttgatttgtaaa 23636361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 18057723 - 18057634
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaac 177  Q
    |||||||| ||||||||||||| |||| |  || ||||| ||||||||||| | ||||||||||||| || ||| ||| |||||||||||    
T  18057723 gtttgattcgctaaaaaatgaaggacaggataggacaacttcaattgtccaatgtttgatttgtaaaactgtttgagatacatgacaaac 18057634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 32132349 - 32132462
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||||||||||| || ||||||  ||| ||||||| ||||||||  ||||||||||||||| |         || ||||||| ||||||    
T  32132349 ttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccacaa 32132448  T
Q  232 cacaactttttgtc 245  Q
    ||||||||||||||    
T  32132449 cacaactttttgtc 32132462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 3932732 - 3932847
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||||||||    | |||| |||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  3932732 gtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 3932831  T
Q  188 agacaggacaaaaact 203  Q
     | |||||||||||||    
T  3932832 gggcaggacaaaaact 3932847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 17868039 - 17867924
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   |  |||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  17868039 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 17867940  T
Q  188 agacaggacaaaaact 203  Q
     |||| || |||||||    
T  17867939 ggacaagataaaaact 17867924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 17877822 - 17877707
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   |  |||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  17877822 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 17877723  T
Q  188 agacaggacaaaaact 203  Q
     |||| || |||||||    
T  17877722 ggacaagataaaaact 17877707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 14925142 - 14925208
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||| | ||  ||||| ||| ||||||||| |||||||||||||    
T  14925142 gtttgatttgctaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaa 14925208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 7396051 - 7396211
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||| ||||||| |||||| || |||||  ||| ||||   || ||||||||||||| || |||  | |||||||||| | ||| ||||     
T  7396051 gtttgatttgctaagaaatgaaggacatgacaaaacaatttcagttgtatggtgtttgatttgtaaagctgtttctgggacatgacaagctggaagcaat 7396150  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||||||||||||| |||        || |||| ||||||| |||||||||||||||||||    
T  7396151 ggacaggacaaaaacagaaatcttgtccc-tcactaaaccactacacaactttttgtctcac 7396211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 11212461 - 11212300
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||  | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||  ||     
T  11212461 gtttgatttgctaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagataag 11212362  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||| |||||||||| |         || |||||||||||||||| ||| |||||||||||    
T  11212361 ggacatgacaaaaactcatacttttgtccctcaccaaaccacaacataaccttttgtctcac 11212300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 34402997 - 34402940
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagt 140  Q
    ||||||||||||||| ||||||||| | |||| | ||||||||| |||||||||||||    
T  34402997 agtgtgtttgatttgttaaaaaatggaggacaagacagaacaacttcaattgtccagt 34402940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 3290863 - 3290799
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgta 152  Q
    |||||||||||||||||||||| |||||| |||||||||   | |||| |||| |||||||||||    
T  3290863 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgta 3290799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 31870022 - 31870088
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||  | || ||||||  || ||||||||| |||||||||||||    
T  31870022 gtttgatttgctaaaaaatgaaggactggacataacaactccagttgtccagtgtttgatttgtaaa 31870088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 4689590 - 4689747
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| ||||||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  4689590 gtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 4689689  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||  |         || ||||||||||||||||||||||||||||    
T  4689690 ggacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaactttttgtc 4689747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 3735561 - 3735404
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||||||  ||||| |||||||||  || ||||||||| ||||||||||||| |  ||| ||  ||||||||||  ||||||||     
T  3735561 gtttgatttgctaaaaaatgaagaacatgacagaacaactccagttgtccagtgtttgatttgtaaaaccgtttcaggtacatgacaaaatggaggcaat 3735462  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||||||||||||||||         || ||||||||||||| ||||||||||||||    
T  3735461 ggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtc 3735404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 8137041 - 8136884
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || | | |||||||||   | ||||||||| |||| |||||||| || ||| ||| ||| ||||||| ||||||||     
T  8137041 gtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgttttgtaaaactgtttcagatacaggacaaactggaggcaag 8136942  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  8136941 agacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 8136884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 41790356 - 41790515
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||| |||||||||||||||||| | ||||||||  | | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||||| |    
T  41790356 tttgattcgctaaaaaatgaaagacaggacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcag-tacaggacaaactggaggcaata 41790454  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||||||||||||| |         || ||||||||||||||||||||||||||||||||    
T  41790455 aacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcac 41790515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 39918711 - 39918550
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||  |||||   | ||||||||| ||||||||||||| || ||| ||| ||| ||||||| ||||||||     
T  39918711 gtttgatttgctaaaaaatgaaggacaggacaagacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaagacaaactggaggcaag 39918612  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||||||    
T  39918611 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcac 39918550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 245
Target Start/End: Complemental strand, 553607 - 553444
Alignment:
Q  82 gagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccgga 181  Q
    ||||||||||||||||||||||||||||  | ||| ||||||||| | ||||||| ||| |||||||| |||| || ||| |   ||| ||||||| |||    
T  553607 gagtgtgtttgatttgctaaaaaatgaagaatatgacagaacaactttaattgtctagtgtttgatttataaaactgtttcaagtacaggacaaactgga 553508  T
Q  182 ggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||| ||||| |||||||||| |         |  ||||||||||||||||||||||||||||    
T  553507 ggcaagagacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtc 553444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 245
Target Start/End: Complemental strand, 32528925 - 32528762
Alignment:
Q  82 gagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccgga 181  Q
    ||||| |||||||||||||||||||||| |||||| ||| |||||   | |||| |||| ||||||||||||| || ||| ||  ||| ||||||| |||    
T  32528925 gagtgcgtttgatttgctaaaaaatgaaggacatgacaggacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 32528826  T
Q  182 ggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    | |||  ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  32528825 gacaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 32528762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 7770171 - 7770328
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| ||||||  ||||||||   | ||||||||| |||||||||||||  | ||| ||  ||| ||||||| ||||||||     
T  7770171 gtttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaag 7770270  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||  |         |||||||||||||||| ||||||||||||||    
T  7770271 ggacaggacaaaaacacatatttttgtccttcaccaaaccacagcacaactttttgtc 7770328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 11963545 - 11963388
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  11963545 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 11963446  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| |||||||||| |         || ||||||||||||| ||||||||||||||    
T  11963445 ggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 11963388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 34795091 - 34794934
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||||| |||||||||   | ||||||| ||||||||||||||| || ||| ||  ||| |||||||  |||||||     
T  34795091 gtttgatttgttaaaaaatgaaggacatgacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaag 34794992  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  34794991 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 34794934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 245
Target Start/End: Complemental strand, 39788405 - 39788240
Alignment:
Q  80 tagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccg 179  Q
    ||||||| |||||||||| |||||||| || |||| | ||||||||    | ||||||||||||||||||||||| || ||| ||  ||| ||||||| |    
T  39788405 tagagtgcgtttgatttgttaaaaaataaaggacaggacagaacaattctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactg 39788306  T
Q  180 gaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||| ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  39788305 taggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 39788240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 245
Target Start/End: Complemental strand, 7523379 - 7523219
Alignment:
Q  85 tgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggc 184  Q
    ||||||||||||||||||||||||| || | | ||||||||    | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||    
T  7523379 tgtgtttgatttgctaaaaaatgaaggataggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc 7523280  T
Q  185 aaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||  ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  7523279 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 7523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 200
Target Start/End: Original strand, 27838966 - 27839078
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||||| |||||||||  || ||||||||| ||||||||||||| || ||| ||  ||||||||||| | ||||||     
T  27838966 gtttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaat 27839065  T
Q  188 agacaggacaaaa 200  Q
     ||||||| ||||    
T  27839066 ggacaggataaaa 27839078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 24181516 - 24181631
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||| |||     
T  24181516 gtttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagccaag 24181615  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  24181616 ggacaggacaaaaact 24181631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 31770483 - 31770640
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||||| || ||||||   | |||| |||| ||||||||||||| || ||| |   ||| ||||||| ||||||||     
T  31770483 gtttgatttgctaaaaaataaaggacatgacataacaactctagttgttcagtgtttgatttgtaaaactgtttcatgtacaagacaaactggaggcaag 31770582  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  31770583 ggacaggacaaaaactcatatttttatccctcaccaaaccacaacacaactttttgtc 31770640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 7208123 - 7208283
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| ||||   ||||||||| | | ||||||||| ||||||||||||| || ||| ||  ||  ||||||| ||| |||| |    
T  7208123 tttgatttgctaaaaaatgaaggacagaacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacgggacaaactggatgcaaga 7208222  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||| || |||||| |         || ||||||||||||| ||||||||||||||||||    
T  7208223 gacagaaccaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcac 7208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 35701481 - 35701325
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| |  ||||||||   | ||||||||| ||||||||||||| || |||  |  ||| ||||||| ||||||||     
T  35701481 gtttgatttgctaaaaaatgaaggacaagatagaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggacaaactggaggcaag 35701382  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgt 244  Q
     ||||||||||||||| |         || |||||||||||||||| ||||||||||    
T  35701381 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacataactttttgt 35701325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 32092873 - 32093030
Alignment:
Q  87 tgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    ||||||||||  ||||||||||| |||| | |||||||||  || |||| |||| |||||||||||||  | ||| ||  ||| ||||||  ||||||||    
T  32092873 tgtttgattttataaaaaatgaaggacaagacagaacaactccagttgtgcagtgtttgatttgtaaaattgtttcaggaacaggacaaattggaggcaa 32092972  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    | || |||||||||||||||        || ||||||||||||| ||||||||||||||    
T  32092973 aggataggacaaaaactgaaatttttgtcc-tcaccaaaccacagcacaactttttgtc 32093030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 37148481 - 37148599
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| || ||| |||||||||  || ||||| | | ||||||||||||| || ||| || ||||  |||||| ||||||||     
T  37148481 gtttgatttgttaaaaaatgaaggatatgacagaacaactccagttgtcaattgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaag 37148580  T
Q  188 agacaggacaaaaactgaa 206  Q
     ||| ||||||||||||||    
T  37148581 ggacgggacaaaaactgaa 37148599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 41459792 - 41459694
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||  ||||||||||||||||| || ||| ||  ||| ||||||| ||||||||    
T  41459792 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtttagtatttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 41459694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 2351884 - 2351727
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||| |||||   | |||| |||| ||||||||||||| || ||| ||  | | ||||||| ||||||||     
T  2351884 gtttgatttgctaaaaaatgaaggacaggacaggacaactctagttgttcagtgtttgatttgtaaaactgtttaaggtataggacaaactggaggcaag 2351785  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  2351784 tgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 2351727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 8560874 - 8560991
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||| ||| ||| || || |||||| ||| || | |||| ||||||||||||| || ||| ||| ||| ||||||| | | |||||    
T  8560874 gtttgatttgctaaaaaacgaaggacgtgacataacaacttcagttattcagtgtttgatttgtaaaactgtttcagatacaggacaaactgaaagcaaa 8560973  T
Q  188 agacaggacaaaaactga 205  Q
     |||| ||||||||||||    
T  8560974 ggacaagacaaaaactga 8560991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 18470321 - 18470438
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||| ||||||||||| |||| | |||||||||  || || |||||| ||||||||||||| || ||| || ||||  |||||| | ||||||      
T  18470321 tttgatttgttaaaaaatgaaggacaagacagaacaactccagttatccagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagg 18470420  T
Q  189 gacaggacaaaaactgaa 206  Q
    |||| |||||||||||||    
T  18470421 gacaagacaaaaactgaa 18470438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 4665035 - 4664923
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| | ||||||||| |||||| |||||||||  || || |||||| ||||||||||||| |  ||| || |||| ||||||| ||||||||     
T  4665035 gtttgatttgattaaaaatgaaggacatgacagaacaactccagttatccagtgtttgatttgtaaaacagtttcagggacaggacaaacaggaggcaag 4664936  T
Q  188 agacaggacaaaa 200  Q
     |||| |||||||    
T  4664935 ggacatgacaaaa 4664923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 29241582 - 29241470
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| | || | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||||||||||  ||||||||     
T  29241582 gtttgatttgctaaaaaatgaaggccaggccagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaag 29241483  T
Q  188 agacaggacaaaa 200  Q
     |||||| |||||    
T  29241482 ggacaggccaaaa 29241470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 249
Target Start/End: Complemental strand, 5598692 - 5598523
Alignment:
Q  80 tagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaa-ttgtccagtatttgatttgtaaatcttttttagagacatgacaaacc 178  Q
    ||||||| ||||||||||||||||||||||  |||   ||||||||| |||| ||||||| | ||||||||||||| || ||| ||  ||  |||||||     
T  5598692 tagagtgcgtttgatttgctaaaaaatgaagcacagaacagaacaac-tcaagttgtccaatgtttgatttgtaaaactgtttcaggtacgagacaaact 5598594  T
Q  179 ggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||||||  || ||||||||||| ||         |||||| ||||| ||| ||||||||||||||||||    
T  5598593 ggaggcaagggagaggacaaaaacagatatttttgtccttcatcaaacaacagcacaactttttgtctcac 5598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 21739097 - 21739210
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||  ||||||||||||||| |         || |||||||||||||     
T  21739097 ttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacag 21739196  T
Q  232 cacaactttttgtc 245  Q
    ||||||||||||||    
T  21739197 cacaactttttgtc 21739210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 249
Target Start/End: Original strand, 700623 - 700654
Alignment:
Q  218 tcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||||||||||||||||||||||||||||||    
T  700623 tcaccaaaccacaacacaactttttgtctcac 700654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 31879968 - 31880083
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| |  | ||||||   | |||| |||| ||||||| ||||| || ||| ||  ||| ||||||| ||||||||     
T  31879968 gtttgatttgctaaaaaatgaaggacaagatataacaactctagttgttcagtgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaag 31880067  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  31880068 tgacaggacaaaaact 31880083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 7725697 - 7725767
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||| |||||||||||||||||| || |||| | || |||||| ||| ||||||||| ||||||| |||||    
T  7725697 gtgtatttgatttgctaaaaaattaaggacaggacaaaacaacttcagttgtccagtgtttgattagtaaa 7725767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 35955149 - 35955085
Alignment:
Q  142 tttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaa 206  Q
    |||||||||||||  | ||| | ||||||||||||| |||||||  ||||| |||||||||||||    
T  35955149 tttgatttgtaaaattgtttcaaagacatgacaaactggaggcatgagacaagacaaaaactgaa 35955085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 40182598 - 40182554
Alignment:
Q  82 gagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaac 126  Q
    ||||| |||||||||||||||||||||| || ||| |||||||||    
T  40182598 gagtgcgtttgatttgctaaaaaatgaaggaaatgacagaacaac 40182554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 50178371 - 50178488
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||||||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  50178371 gtttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 50178470  T
Q  188 agacaggacaaaaactga 205  Q
    ||||||||||||||||||    
T  50178471 agacaggacaaaaactga 50178488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 85 - 245
Target Start/End: Complemental strand, 39078871 - 39078711
Alignment:
Q  85 tgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggc 184  Q
    ||||||||||||| ||||||||||| |||||| |||||||||  || ||||||||| ||||||||||||| || ||| || ||||  |||||| ||||||    
T  39078871 tgtgtttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggc 39078772  T
Q  185 aaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    || ||| ||||||||| |||||        || ||||||||||||||||||| ||||||||    
T  39078771 aagagataggacaaaacctgaaatttttgtccctcaccaaaccacaacacaaatttttgtc 39078711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 44649043 - 44649200
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||  || || |||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  44649043 gtttgatttgctaaaaaatgaaggacaggacagaacaactccagttatccagtttttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 44649142  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||||||||||||         || ||| ||||||||||||||||||||||||    
T  44649143 agacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtc 44649200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 50729421 - 50729582
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | ||||||||| ||| ||||||||| ||||||||||||| || ||| || ||||  |||||| ||||||||     
T  50729421 gtttgatttgttaaaaaatgaaggacaagacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaag 50729520  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||| |||||||||||||        |  ||||||||||||| ||||||||||||||||||    
T  50729521 ggacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcac 50729582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 246
Target Start/End: Original strand, 22318263 - 22318421
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||||| |||||||||  ||  |||| ||| ||||||||||||| || |||||| ||||  |||||| | ||||||     
T  22318263 gtttgatttgttaaaaaatgaaggacatgacagaacaaccccagctgtctagtgtttgatttgtaaaactgttttagggacagaacaaactgaaggcaag 22318362  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtct 246  Q
    |||||||||||||  ||||        || |||||||||||||||||||||||||||||    
T  22318363 agacaggacaaaatttgaaatttttgtccctcaccaaaccacaacacaactttttgtct 22318421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 249
Target Start/End: Original strand, 25978486 - 25978651
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggag 182  Q
    |||| |||||||||| |||||||| || |||||| || |||||| |||||| |||||| ||||||||||||| || ||| || |||||||||||  ||||    
T  25978486 agtgcgtttgatttgttaaaaaataaaggacatgacaaaacaacttcaattatccagtgtttgatttgtaaaactgtttcag-gacatgacaaattggag 25978584  T
Q  183 gcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||   |||||||||||||||||        || ||||||||||| | ||||||||||||||||||    
T  25978585 gcaatgaacaggacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcac 25978651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 2725012 - 2725169
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||||||  ||| ||||||| ||||||||     
T  2725012 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaag 2725111  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  2725112 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 2725169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 44324221 - 44324378
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||| |||||||| |||||| |||||||||  || |||| |||| ||||||||||||| || ||| ||  ||| |||||||  ||||||||    
T  44324221 gtttgatttgctagaaaatgaaggacatgacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaa 44324320  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||| |||||||||||||         || ||||||||||||| ||||||||||||||    
T  44324321 agacgggacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtc 44324378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 33176911 - 33177068
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || || ||| ||||||||  | | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  33176911 gtttgatttgctaaaaaataaaggatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 33177010  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  33177011 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 33177068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 50727792 - 50727949
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||| ||| ||||||||||||| || ||| ||  ||||||||||| | ||||||     
T  50727792 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaag 50727891  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||| ||||||||||||||||||||||||    
T  50727892 ggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtc 50727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 50735806 - 50735963
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||| ||| ||||||||||||| || ||| ||  ||||||||||| | ||||||     
T  50735806 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaag 50735905  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||| ||||||||||||||||||||||||    
T  50735906 ggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtc 50735963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 13110517 - 13110447
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    ||||||||||||||||||||||||||||||||| ||||| ||  ||| ||||||||| |||||||||||||    
T  13110517 gtgtgtttgatttgctaaaaaatgaaagacatgacagaaaaatttcagttgtccagtgtttgatttgtaaa 13110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 245
Target Start/End: Original strand, 20802405 - 20802567
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggag 182  Q
    |||| |||||||||| ||||||||||| || | | ||||||||| | | || |||||| ||||||||||||| || ||| ||  ||| ||||||| ||||    
T  20802405 agtgcgtttgatttgttaaaaaatgaaggataggacagaacaactttagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 20802504  T
Q  183 gcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||| |||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  20802505 gcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 20802567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 246
Target Start/End: Original strand, 38486136 - 38486294
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| || |||| ||||||||     
T  38486136 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaag 38486235  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtct 246  Q
     |||| |||||||||| |         || ||||||||||||| |||||||||||||||    
T  38486236 ggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtct 38486294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 3649843 - 3649686
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | |||||||||  || ||||| ||| ||||||||||||| || ||| || ||||  |||||| | ||||||     
T  3649843 gtttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaag 3649744  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| ||        || ||||||||||||| ||||||||||||||    
T  3649743 ggacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtc 3649686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 21580232 - 21580072
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | ||||||||    ||||||||||||||||||||||||| || ||| ||  ||| ||||||  ||||||||     
T  21580232 gtttgatttgctaaaaaat-aaggacaggacagaacaattctaattgtccagtatttgatttgtaaaactgtttcaggtacaggacaaattggaggcaag 21580134  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||||||    
T  21580133 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcac 21580072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 52949927 - 52949770
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | || ||||||   | ||||||||| ||| ||||||||| || ||| ||  ||| ||||||| ||||||||     
T  52949927 gtttgatttgttaaaaaatgaaggacacgacaaaacaactctagttgtccagtgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaag 52949828  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||||||||||||         || ||| ||||||||||||||||||||||||    
T  52949827 agacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtc 52949770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 245
Target Start/End: Complemental strand, 20694581 - 20694421
Alignment:
Q  85 tgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggc 184  Q
    |||||||||||||||||||| |||| ||||   |||||||||   | ||||||||| ||| ||||||||| || ||||||  ||| ||||||| | ||||    
T  20694581 tgtgtttgatttgctaaaaactgaaggacaacacagaacaactctagttgtccagtgtttaatttgtaaaactgttttaggtacaggacaaactgaaggc 20694482  T
Q  185 aaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||| ||||||||||||||| |         || ||||||||||||||| ||||||||||||    
T  20694481 aaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtc 20694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 252
Target Start/End: Complemental strand, 29593102 - 29592938
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||||||| | ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||| ||||     
T  29593102 gtttgatttgctaaaaaatgaaggacaggacagaacaccttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggatgcaag 29593003  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
     |||| |||||||||| |          |||||| |||||||| |||||||||||||| ||||||    
T  29593002 ggacatgacaaaaactcatatttttgtacttcactaaaccacagcacaactttttgtcccacata 29592938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 84 - 203
Target Start/End: Complemental strand, 24210530 - 24210411
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||| |||||||||||||||||||||||| | | | |||||||   |||||||| || ||||||||||||| || ||| ||  ||| ||||||| |||||    
T  24210530 gtgtttttgatttgctaaaaaatgaaagataggacggaacaactctaattgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 24210431  T
Q  184 caaaagacaggacaaaaact 203  Q
    |||  |||||||||||||||    
T  24210430 caagggacaggacaaaaact 24210411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 11056249 - 11056132
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| | || |  | |||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  11056249 gtttgatttgctaaaaaatgaaggtcaggataaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 11056150  T
Q  188 agacaggacaaaaactga 205  Q
     |||| ||||||||||||    
T  11056149 ggacaagacaaaaactga 11056132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 12601093 - 12600932
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| |  ||| ||  ||| ||||||| ||||  ||     
T  12601093 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggagataag 12600994  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||| |||||||||| |         || ||| ||||||||||||||||||||||||||||    
T  12600993 ggacaagacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcac 12600932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 21202902 - 21202789
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||||| |||||||||||||||| |         || ||||||||||||||    
T  21202902 ttgtccagtgtttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaactcataattttgtccctcaccaaaccacaa 21202803  T
Q  232 cacaactttttgtc 245  Q
    ||||||||||||||    
T  21202802 cacaactttttgtc 21202789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 23522087 - 23521930
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||| ||||     
T  23522087 gtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaag 23521988  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     || |||||||||||| |         || ||||||||||||||||||||||||||||    
T  23521987 ggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 23521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 24002546 - 24002389
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| ||||   |||||||||   | ||||||||| ||||||||||||| |  ||| ||  ||| ||||||| ||||||||     
T  24002546 gtttgatttgctaaaaaatgaaggacagtacagaacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggaggcaag 24002447  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  24002446 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 24002389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 36497424 - 36497267
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || | | || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||| |||     
T  36497424 gtttgatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaag 36497325  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  36497324 agacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 36497267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 38812727 - 38812570
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||| |||||||||||||| || |||| | || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  38812727 gtttcatttgctaaaaaataaaggacaggacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 38812628  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  38812627 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 38812570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 46680389 - 46680550
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||||||||    | |||| |||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  46680389 gtttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 46680488  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || | ||||||||||| ||||||||||||||||||    
T  46680489 ggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactttttgtctcac 46680550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 200
Target Start/End: Original strand, 47361292 - 47361405
Alignment:
Q  88 gtttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||| |||| |||| | ||||||||| | | ||||||||| ||||||||||||| || ||| ||  ||| ||||||||||||||||    
T  47361292 gtttgatttgctaaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaccggaggcaa 47361391  T
Q  187 aagacaggacaaaa 200  Q
      |||| |||||||    
T  47361392 gggacaagacaaaa 47361405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 29616373 - 29616257
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatct-tttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||||||| ||||||  ||||||||   | ||||||||| ||||||||||||| || |||  ||  ||| ||||||| ||||||||    
T  29616373 gtttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaaggtacaggacaaactggaggcaa 29616274  T
Q  187 aagacaggacaaaaact 203  Q
      |||||||||||||||    
T  29616273 gggacaggacaaaaact 29616257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 55594093 - 55593977
Alignment:
Q  88 gtttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||| ||||  ||| | |||||||||   | ||||||||||||||||||||||| || ||| ||  |||||| |||| ||||||||    
T  55594093 gtttgatttgctaaaaaaatgaagaacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacatgataaactggaggcaa 55593994  T
Q  187 aagacaggacaaaaact 203  Q
      |||||||||||||||    
T  55593993 gggacaggacaaaaact 55593977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 1231518 - 1231403
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| || | | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| || |||| ||||||||     
T  1231518 gtttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaag 1231419  T
Q  188 agacaggacaaaaact 203  Q
    |||| |||||||||||    
T  1231418 agactggacaaaaact 1231403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 2629830 - 2629945
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| || ||||||   | |||||| || ||||||||||||| || ||| ||  ||| |||||||  ||||||||    
T  2629830 gtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtcccgtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaa 2629929  T
Q  188 agacaggacaaaaact 203  Q
     |||| ||||||||||    
T  2629930 ggacatgacaaaaact 2629945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 6973792 - 6973907
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| |  |||||||| |   ||||||||| ||||||||||||| || ||| ||  ||  ||||||| ||||||||     
T  6973792 gtttgatttgctaaaaaatgaaggacaggatagaacaacttttgttgtccagtgtttgatttgtaaaactgtttcaggtactggacaaacgggaggcaat 6973891  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  6973892 tgacaggacaaaaact 6973907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 36886139 - 36886024
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  36886139 gtttgatttgctaaaaaataaaggacaagacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 36886040  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  36886039 ggacaggacaaaaact 36886024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 20517900 - 20518014
Alignment:
Q  88 gtttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||| |||| |||| | |||||||||   | |||| |||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||    
T  20517900 gtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaa 20517999  T
Q  187 aagacaggacaaaaa 201  Q
     ||||||||||||||    
T  20518000 gagacaggacaaaaa 20518014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 29785415 - 29785573
Alignment:
Q  88 gtttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||| |||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||| |||    
T  29785415 gtttgatttgctaaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaa 29785514  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
      ||||| ||||||||| |         || |||||||||||||||||| |||||||||    
T  29785515 gggacagaacaaaaactcatatttttgtccctcaccaaaccacaacacagctttttgtc 29785573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 245
Target Start/End: Complemental strand, 42772984 - 42772838
Alignment:
Q  99 taaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaa 198  Q
    ||||||||||| |||||| || |||||| | | || || ||| |||||||||||||  | ||| ||  |||||||||||  ||||||| ||||| |||||    
T  42772984 taaaaaatgaatgacatgacataacaactttagttttcaagtgtttgatttgtaaaattgtttcaggtacatgacaaacttgaggcaagagacaagacaa 42772885  T
Q  199 aaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||| |         |||||||||||||||||||||||||||||||    
T  42772884 aaactcatatttttgtccttcaccaaaccacaacacaactttttgtc 42772838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 2114247 - 2114190
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagta 141  Q
    |||||||||||||||||||||||||| |||||| |||||||||  || ||||||||||    
T  2114247 gtgtgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagta 2114190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 6776785 - 6776628
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| |||||||||||||  |  |||||  | |  |||||  ||||||||     
T  6776785 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaag 6776686  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  6776685 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 6776628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 9512219 - 9512376
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||| ||| ||||||  ||||||||   | |||| |||| ||||||||||||| || ||| ||  ||| || |||| ||||||||     
T  9512219 gtttgatttgctaaaaaacgaaggacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaag 9512318  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
      |||||||||||||| |         |||||||||||||||| ||||||||||||||    
T  9512319 taacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtc 9512376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 56154828 - 56154671
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |  | | ||||||||| | | ||||||||| ||||||||||||| || ||| ||  ||| || |||| ||||||||     
T  56154828 gtttgatttgctaaaaaatgaaggttaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggaaaaactggaggcaag 56154729  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||| ||||||||| |         || ||||||||||||| ||||||||||||||    
T  56154728 ggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 56154671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 252
Target Start/End: Complemental strand, 28115457 - 28115295
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaa-ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||  | | | ||||||||| |||| ||||| ||| ||||||||||||| || |||| |  ||| ||||||| ||||||||     
T  28115457 tttgatttgctaaaaaatgaagcaaagggcagaacaac-tcaagttgtctagtgtttgatttgtaaaactgttttggt-acaagacaaactggaggcaag 28115360  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
     ||||||| ||||| |||         || |||||||||||||||||||||||||||| ||||||    
T  28115359 ggacaggagaaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacata 28115295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 42870183 - 42870063
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggag 182  Q
    |||| |||||||||||||| ||||||| |||||| || ||||||   | |||||| || ||||||||||||| || |||  |  ||| ||||||| || |    
T  42870183 agtgcgtttgatttgctaagaaatgaaggacatgacataacaactctagttgtccggtgtttgatttgtaaaactgtttctggtacaggacaaactgggg 42870084  T
Q  183 gcaaaagacaggacaaaaact 203  Q
    |||| ||||||||||||||||    
T  42870083 gcaagagacaggacaaaaact 42870063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 9807362 - 9807247
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||| ||||| || | | ||| ||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| |||||||  || ||||     
T  9807362 gtttgatttgctaaaacatgaaggataggacaggacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactagatgcaat 9807263  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  9807262 ggacaggacaaaaact 9807247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 54543195 - 54543081
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||| |||||||| |||||||||   | |||| |||| ||||||||||||| || ||| |   ||| ||||||  ||||||||     
T  54543195 gtttgatttgctaaaaaatg-aagacatgacagaacaactctagttgttcagtgtttgatttgtaaaactatttcaagtacaggacaaattggaggcaag 54543097  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  54543096 ggacaggacaaaaact 54543081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 56487161 - 56487204
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaac 126  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  56487161 agtgcgtttgatttgctaaaaaatgaaagacatgacagaacaac 56487204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 7554836 - 7554902
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    ||||||||||||||||| ||||||| ||| ||||||||  |||  |||||||| |||||||||||||    
T  7554836 gtttgatttgctaaaaagtgaaagatatgacagaacaatttcagctgtccagtgtttgatttgtaaa 7554902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 49151979 - 49152133
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| ||||   ||||||||| | | || |||||| ||| ||||||||| || ||| ||  ||| ||||||| ||| ||||     
T  49151979 gtttgatttgctaaaaaatgaaggacagaacagaacaactttagttatccagtgtttaatttgtaaaactgtttcaggtacaagacaaactggatgcaag 49152078  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaacttttt 242  Q
     |||| |||||||||| |         || |||||||||||||||||||||||||    
T  49152079 ggacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttt 49152133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 37865916 - 37865803
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||||||||||| || ||| ||  ||||||||| | |||||||| ||||| |||||||||| |         || |||||||| |||||    
T  37865916 ttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaaactcatatttttgtccctcaccaaatcacaa 37865817  T
Q  232 cacaactttttgtc 245  Q
    ||||||||||||||    
T  37865816 cacaactttttgtc 37865803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 2787171 - 2787056
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| || ||||||   | ||||| ||| |||||||||||||  | ||| ||  |||  |||||| ||| ||||     
T  2787171 gtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaattgtttcaggtacagtacaaactggatgcaag 2787072  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  2787071 ggacaggacaaaaact 2787056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 4325998 - 4325883
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| ||  ||| | || ||||||   | |||| |||| ||||||||||||| || ||| ||  ||||||||||| ||||||||     
T  4325998 gtttgatttgctaaaaaataaagtacaagacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag 4325899  T
Q  188 agacaggacaaaaact 203  Q
     ||||||| |||||||    
T  4325898 ggacaggagaaaaact 4325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 14296774 - 14296659
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | || ||||||   ||||||||||| |||||||||||||  | ||| ||  | | |||||||  |||||||     
T  14296774 gtttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggcaag 14296675  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  14296674 ggacaggacaaaaact 14296659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 14315022 - 14314907
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | || ||||||   ||||||||||| |||||||||||||  | ||| ||  | | |||||||  |||||||     
T  14315022 gtttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggcaag 14314923  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  14314922 ggacaggacaaaaact 14314907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 201
Target Start/End: Complemental strand, 44640538 - 44640417
Alignment:
Q  79 ctagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaacc 178  Q
    |||| ||| ||||||| | |||||||||||| |||| | ||||||||| ||| |||| |||| ||||||||||||| || |||  |  | |||||||||     
T  44640538 ctagtgtgcgtttgatctactaaaaaatgaatgaca-gacagaacaacttcagttgtacagtgtttgatttgtaaaactgtttatggaaaatgacaaact 44640440  T
Q  179 ggaggcaaaagacaggacaaaaa 201  Q
     ||||||| ||||| ||||||||    
T  44640439 agaggcaagagacaagacaaaaa 44640417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 34930080 - 34930007
Alignment:
Q  130 aattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaact 203  Q
    ||||||||||| ||||||||||||| || ||| ||| |||  | |||| ||||||||  |||||||||||||||    
T  34930080 aattgtccagtgtttgatttgtaaaactgtttcagatacagaataaactggaggcaagggacaggacaaaaact 34930007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 33364658 - 33364819
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||||||||| ||| ||||||||| ||| ||||||||| || ||| ||  ||| ||||||| ||||||||     
T  33364658 gtttgatttgctaaaaaatgaaggacaagacagaacaacttcagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaag 33364757  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||||||||||||||||         || ||| ||||||||| ||||||||||||||||||    
T  33364758 agacaggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcac 33364819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 31882893 - 31883019
Alignment:
Q  79 ctagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaacc 178  Q
    |||| ||| |||||||||||||||||||||| |||||| |||||||||  || ||||||||| ||||||||||||| || ||| ||  ||| |||||||     
T  31882893 ctagggtgcgtttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 31882992  T
Q  179 ggaggcaaaagacaggacaaaaactga 205  Q
    |||||||| ||||| ||||||||||||    
T  31882993 ggaggcaagagacacgacaaaaactga 31883019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 51925088 - 51925245
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||| |||||||| || | | |||||||||  || ||||||||| ||| ||||||||| || ||| ||  ||||||||||| |||||||||    
T  51925088 gtttgatttgctagaaaatgaaggataggacagaacaactccagttgtccagtgtttaatttgtaaaactgtttcaggtacatgacaaactggaggcaaa 51925187  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||||||||||||||||         || ||||||||||||||||||||||||||||    
T  51925188 ggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtc 51925245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 41682933 - 41683050
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || |||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  41682933 gtttgatttgctaaaaaatgaaggacaggacaaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 41683032  T
Q  188 agacaggacaaaaactga 205  Q
    ||||| ||||||||||||    
T  41683033 agacaagacaaaaactga 41683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 1344585 - 1344748
Alignment:
Q  86 gtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggca 185  Q
    |||||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||||    
T  1344585 gtgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactatttcaggtacaggacaaactggaggca 1344684  T
Q  186 aaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    |  ||||||||| ||||| |         || ||||||||||||| ||||||||||||||||||    
T  1344685 agggacaggacagaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcac 1344748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 3695187 - 3695302
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || ||||||   | ||||||||| ||||||||||||| || ||||||  ||||||||||| ||||||||     
T  3695187 gtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactggaggcaag 3695286  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  3695287 ggacaggacaaaaact 3695302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 19906965 - 19906806
Alignment:
Q  90 ttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaag 189  Q
    |||||||| ||||||||||| |||| |  | |||||| ||| ||||||||| |||||||||||||  | ||| || ||||  |||||| ||||||||  |    
T  19906965 ttgatttgttaaaaaatgaaggacaggataaaacaacttcagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaaggg 19906866  T
Q  190 acaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    |||||||||||||||||        || ||||||||||||| ||||||||||||||||||    
T  19906865 acaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcac 19906806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 51259660 - 51259775
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  51259660 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 51259759  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  51259760 ggacaggacaaaaact 51259775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 3964493 - 3964336
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| || | | ||||||||| ||| ||||||||| ||||||||||||| || ||| |  |||||||||||  ||||||||     
T  3964493 gtttgatttgataaaaaatgaaggataggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaag 3964394  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
      || ||||||||||||||        || ||||||||||||| ||||||||||||||    
T  3964393 gaactggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtc 3964336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 24571490 - 24571329
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||||||||||||||| |||| | || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||    
T  24571490 gtgtgtttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagg 24571391  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||  ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  24571390 caagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 24571329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 29585080 - 29584923
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  29585080 gtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 29584981  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  29584980 tgacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 29584923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 12349051 - 12349166
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || ||||||  || ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  12349051 gtttgatttgctaaaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 12349150  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  12349151 ggacaggacaaaaact 12349166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 20255249 - 20255134
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  20255249 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 20255150  T
Q  188 agacaggacaaaaact 203  Q
      ||||||||||||||    
T  20255149 gaacaggacaaaaact 20255134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 21221241 - 21221401
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | |||||||||   | ||||||| ||||||||||||||| || ||| ||  ||| ||| ||| ||||||||     
T  21221241 gtttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggac-aactggaggcaag 21221339  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||||||    
T  21221340 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcac 21221401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 39052718 - 39052875
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||||||||||| | || ||||||   | ||||| ||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  39052718 gtttgatttgctaaaaaatgaaagacaagacaaaacaactctagttgtctagtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggcaat 39052817  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         |  ||||||||||||||||||||||||||||    
T  39052818 ggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtc 39052875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 40094708 - 40094547
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  |||  |||||| ||||||||     
T  40094708 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacagaacaaactggaggcaag 40094609  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||| ||||    
T  40094608 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcac 40094547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 50386336 - 50386449
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||  || ||||| ||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  50386336 gtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 50386435  T
Q  188 agacaggacaaaaa 201  Q
    ||||| ||||||||    
T  50386436 agacatgacaaaaa 50386449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 200
Target Start/End: Original strand, 22484623 - 22484735
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | |||||||||  ||||||||||||  |||||||||||| |  ||| || |||||||||||| ||||||||     
T  22484623 gtttgatttgataaaaaatgaaggacaggacagaacaactccaattgtccagtgattgatttgtaaaacagtttcagggacatgacaaactggaggcaag 22484722  T
Q  188 agacaggacaaaa 200  Q
     |||| |||||||    
T  22484723 ggacatgacaaaa 22484735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 3864557 - 3864712
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||| ||||||||||||||||  |||| | ||||||||| | | |||||| || ||||||||||||| || ||| ||  ||| ||||||| |||||||||    
T  3864557 gtttcatttgctaaaaaatga--gacaggacagaacaactttagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaa 3864654  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || || |||||||||||||||||||||||||    
T  3864655 ggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtc 3864712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 5442484 - 5442386
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||    
T  5442484 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaagacaaactggaggcaa 5442386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 50679003 - 50678842
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaa-ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    ||||||||||||||||||||||  ||| | || |||||  |||| ||||||||| ||||||||| ||| || ||| ||  ||| ||||||| ||||||||    
T  50679003 gtttgatttgctaaaaaatgaagtacaagacataacaat-tcaagttgtccagtgtttgatttgaaaaactgtttcaggtacaggacaaactggaggcaa 50678905  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    |  ||||||||||||||||         |  ||||||||||||||||||||||||||||||||    
T  50678904 agaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcac 50678842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 2135275 - 2135118
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||  |||||||     
T  2135275 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaag 2135176  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||| ||||||||| |         || ||||||||||||| ||||||||||||||    
T  2135175 ggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 2135118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 3867529 - 3867686
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | |||||||||  || |||||| || ||||||||||||| || ||| || ||||  ||| || |||| |||     
T  3867529 gtttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcagggacagaacatactggagacaag 3867628  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||| ||||||| |||||        || ||||||||||||| ||||||||||||||    
T  3867629 agacatgacaaaacctgaaatttttgtccctcaccaaaccacagcacaactttttgtc 3867686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 10747405 - 10747288
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | || |||||  ||| |||| |||| ||||||||||||| || ||||||  ||| ||||||| |||| |||     
T  10747405 gtttgatttgttaaaaaatgaaggacaggacaaaacaatttcagttgttcagtgtttgatttgtaaaactattttaggtacaggacaaactggagacaag 10747306  T
Q  188 agacaggacaaaaactga 205  Q
    ||| ||||||||||||||    
T  10747305 agataggacaaaaactga 10747288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 245
Target Start/End: Complemental strand, 21374139 - 21373978
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    ||||||||| ||||||||||||||||  | ||| || |||||| ||| ||||| ||| ||||||||||||| || ||| ||  ||| |||||||  ||||    
T  21374139 gtgtgtttggtttgctaaaaaatgaagaaaatgacataacaacttcagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgagg 21374040  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||  |||||||||||| || |         || ||||||||||||||||||||||||||||    
T  21374039 caagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaactttttgtc 21373978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 54622678 - 54622743
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    ||||||||||||||||||||| |||||| || |||||| ||| |||||| ||||||||||||||||    
T  54622678 tttgatttgctaaaaaatgaaggacatgacaaaacaacttcagttgtccggtatttgatttgtaaa 54622743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 252
Target Start/End: Complemental strand, 24721690 - 24721526
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||| ||||| ||||||||||| |||||| |||||||||   | |||| |||| ||||||||||||| || ||| || ||||  |||||| ||||| |||    
T  24721690 gtttaatttgttaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggtaaa 24721591  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
     ||||||||||||||| ||         | ||| ||||||||||||||||||||| || ||||||    
T  24721590 ggacaggacaaaaactaaaattttggtacctcaacaaaccacaacacaactttttatcccacata 24721526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 245
Target Start/End: Original strand, 42636284 - 42636440
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| |||| | ||||||||    | ||||||||| ||||||||||||| || ||||||  | | ||||||| ||||||||      
T  42636284 tttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgttttaggtataggacaaactggaggcaagg 42636383  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||| ||||||||| |         || ||||||||||||| ||||||||||||||    
T  42636384 gacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 42636440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 44117144 - 44117029
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||  | |||||||||   | ||||||||| ||||||||||||| |  ||| ||  ||| ||||||| ||||||||     
T  44117144 gtttgatttgctaaaaaatgaaggactggacagaacaactctagttgtccagtgtttgatttgtaaaaccgtttcaggtacaggacaaactggaggcaag 44117045  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  44117044 ggacaggacaaaaact 44117029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 249
Target Start/End: Original strand, 25860312 - 25860462
Alignment:
Q  99 taaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaa 198  Q
    ||||||||||| ||| || |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||  |||| |||||    
T  25860312 taaaaaatgaaggacttgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaa 25860411  T
Q  199 aaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||| |         || ||||||||||||| ||||||||||||||||||    
T  25860412 aaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcac 25860462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 49748791 - 49748948
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaa-ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    ||||||||||||| |||||||| || | |  |||||||| |||| ||||  ||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||    
T  49748791 gtttgatttgctagaaaatgaaggataggatagaacaac-tcaagttgtttagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 49748889  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    | |||| ||||||||||||         || ||||||||||||||||||||||||||||    
T  49748890 aggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtc 49748948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 51296784 - 51296629
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||   |||||||   |||||||||   ||||||||||| ||| ||||||||| || ||| ||  ||| ||||||| |||||||||    
T  51296784 gtttgatttgctaaaaat--aaagacagaacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaaa 51296687  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||| ||||||||    
T  51296686 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtc 51296629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 28675995 - 28675838
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| |||||||||||  ||| | ||||||||    | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  28675995 gtttgatttgttaaaaaatgaagaacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 28675896  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     || |||||||||||| |         || ||||||||||||||||||||||||||||    
T  28675895 ggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 28675838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 45690786 - 45690903
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||| ||| |||| |||| |  |||||||| ||| ||||||||| ||||||||| ||| || ||| ||  ||| || |||  |||||||||    
T  45690786 gtttgatttgctataaagtgaaggacaggatagaacaacttcagttgtccagtgtttgatttgcaaaactgtttcaggtacaggataaattggaggcaaa 45690885  T
Q  188 agacaggacaaaaactga 205  Q
     |||||||||||||||||    
T  45690886 ggacaggacaaaaactga 45690903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 53557676 - 53557836
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    |||||||||||||||||| || || ||| |||| ||||   | |||| || | ||||||||||||| || ||||||  ||| ||||||| ||||||||      
T  53557676 tttgatttgctaaaaaataaaggatatgacagagcaactctagttgttcaatgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaatg 53557775  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    ||||||||||||||| |         || ||||||||||||  ||||||||||||||||||    
T  53557776 gacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactttttgtctcac 53557836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 25927207 - 25927322
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||  |||| | |||||||||   | ||||| | | ||||||||||||| || ||| | | ||| ||||||| ||||||||     
T  25927207 gtttgatttgctaaaaaatgatggacaggacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaaatacaggacaaactggaggcaag 25927306  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  25927307 ggacaggacaaaaact 25927322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 38213559 - 38213444
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||| |||||||||||||||||||||| |  ||||||||   | ||||||||| |||||||||||||  | ||| ||  | | ||||| | ||||||||     
T  38213559 gttttatttgctaaaaaatgaaagacaggatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtataggacaatctggaggcaag 38213460  T
Q  188 agacaggacaaaaact 203  Q
    ||||||||||||||||    
T  38213459 agacaggacaaaaact 38213444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 245
Target Start/End: Complemental strand, 34026867 - 34026715
Alignment:
Q  93 atttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagaca 192  Q
    ||||||||||||||||| |||| | |||||||||   | |||| |||| ||||||||||||| || ||| ||  | | ||||||| ||||||||  ||||    
T  34026867 atttgctaaaaaatgaaggacaggacagaacaactctatttgttcagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggaca 34026768  T
Q  193 ggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||||||||| |         || ||||||||||||||||||| ||||||||    
T  34026767 tgacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtc 34026715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 43175680 - 43175614
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| ||||   |||||||||   | ||||||||| |||||||||||||    
T  43175680 gtttgatttgctaaaaaatgaaggacagaacagaacaactctagttgtccagtgtttgatttgtaaa 43175614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 29646270 - 29646157
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    |||||||| |||||||||||| |||| | || |||||   || |||| |||| ||||||||||||| || ||||||  ||| || |||| ||||||||      
T  29646270 tttgattttctaaaaaatgaaggacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgttttaggtacacgataaactggaggcaagg 29646171  T
Q  189 gacaggacaaaaac 202  Q
    || |||||||||||    
T  29646170 gataggacaaaaac 29646157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 432
Target Start/End: Original strand, 1072578 - 1072610
Alignment:
Q  400 tttttaatctctagctatatatttttagttaat 432  Q
    ||||||||||||||||||||| |||||||||||    
T  1072578 tttttaatctctagctatatagttttagttaat 1072610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 72
Target Start/End: Original strand, 1073204 - 1073236
Alignment:
Q  40 ttagtttaagctttgaagcaaattgccccacat 72  Q
    ||||||||||||||||||||||||| |||||||    
T  1073204 ttagtttaagctttgaagcaaattgtcccacat 1073236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 6179631 - 6179515
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||  ||||||||||| |||| |  | ||||||  || ||||||||| ||||||||||||| |  ||| ||| ||| | ||||| ||||| ||     
T  6179631 gtttgattttataaaaaatgaaggacaggataaaacaactccagttgtccagtgtttgatttgtaaaacagtttcagaaacaggtcaaactggaggtaag 6179532  T
Q  188 agacaggacaaaaactg 204  Q
     ||||||||||||||||    
T  6179531 ggacaggacaaaaactg 6179515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 31004345 - 31004188
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||||||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||||      
T  31004345 gtttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcacg 31004246  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||||||||||||||||         || ||||||||||||||||||||||||||||    
T  31004245 ggacaggacaaaaactgatgtttttgtccctcaccaaaccacaacacaactttttgtc 31004188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 42512731 - 42512848
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | ||||||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  42512731 gtttgatttgctaaaaaataaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 42512830  T
Q  188 agacaggacaaaaactga 205  Q
    ||||||||||||||||||    
T  42512831 agacaggacaaaaactga 42512848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 15539851 - 15540008
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | |||||||||  || ||||||||| ||||||||||||| || ||| |  ||||  |||||| ||||||||     
T  15539851 gtttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaaggacagaacaaactggaggcaag 15539950  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||||||| |||||        | |||||||||||||| ||||||||||||||    
T  15539951 agacaggacaaaacctgaaacttttgtctttcaccaaaccacagcacaactttttgtc 15540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 26764756 - 26764913
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| ||||||||| |||||||||  || ||||||||| ||||||||||| |  | ||||||  ||| || |||| |||||||||    
T  26764756 gtttgatttgctaaaaaataaaagacatgacagaacaactccagttgtccagtgtttgatttgtacaattgttttaggtacaagataaactggaggcaaa 26764855  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||| ||||||||||||||||||||||    
T  26764856 ggacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttttgtc 26764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 6143944 - 6144063
Alignment:
Q  85 tgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggc 184  Q
    ||||||||||||| || |||||||| |||| | |||||||||  || ||||||| | ||||||||||||| |  ||| ||||||||||||||| ||||||    
T  6143944 tgtgtttgatttgatacaaaatgaaggacaggacagaacaactgcagttgtccaatgtttgatttgtaaaacagtttcagagacatgacaaactggaggc 6144043  T
Q  185 aaaagacaggacaaaaactg 204  Q
    ||  ||||||||||||||||    
T  6144044 aagggacaggacaaaaactg 6144063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 1351396 - 1351553
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  1351396 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 1351495  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
      |||||||||||||| |         || ||||||||||||||||||||||||||||    
T  1351496 gaacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 1351553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 50304864 - 50304747
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||  || ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  50304864 gtttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 50304765  T
Q  188 agacaggacaaaaactga 205  Q
    | ||| ||||||||||||    
T  50304764 aaacaagacaaaaactga 50304747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 26118179 - 26118291
Alignment:
Q  91 tgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaaga 190  Q
    ||||||||||||||||||| |||||| || ||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||| ||    
T  26118179 tgatttgctaaaaaatgaaggacatgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaagga 26118278  T
Q  191 caggacaaaaact 203  Q
    |||||||||||||    
T  26118279 caggacaaaaact 26118291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 85 - 245
Target Start/End: Complemental strand, 32270569 - 32270409
Alignment:
Q  85 tgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggc 184  Q
    ||||||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  | | ||||||| ||||||    
T  32270569 tgtgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtagaggacaaactggaggc 32270470  T
Q  185 aaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||  ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  32270469 aagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 32270409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 244
Target Start/End: Original strand, 35387272 - 35387428
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||| ||     
T  35387272 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggtaag 35387371  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgt 244  Q
     ||||||||||||||| |         || ||||||||||||| |||||||||||||    
T  35387372 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgt 35387428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 13994066 - 13994196
Alignment:
Q  118 cagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnncct 217  Q
    ||||||||| ||| ||||||||| ||||||||||||| || ||| |  |||||||||||  ||||||||   || ||||||||||||||        ||     
T  13994066 cagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccc 13994165  T
Q  218 tcaccaaaccacaacacaactttttgtctca 248  Q
    |||||||||||||||||||||||||||||||    
T  13994166 tcaccaaaccacaacacaactttttgtctca 13994196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 21071827 - 21071729
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    ||||||||||||||| ||||||  ||||| ||||||||| ||||||||||||| |||||||||||||  | ||| ||  ||||||||||| ||||||||    
T  21071827 gtttgatttgctaaagaatgaagtacatgacagaacaacttcaattgtccagtgtttgatttgtaaaattgtttcaggtacatgacaaactggaggcaa 21071729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 41967809 - 41967971
Alignment:
Q  88 gtttgatttg-ctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||| |||||||||||| |||| | |||||||||   | ||||||||||||||||||||||| || ||| ||  ||| |||||||  |||||||    
T  41967809 gtttgatttgactaaaaaatgaaggacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaa 41967908  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||| |||||||||| |         || | ||||||||||||||||||||||||||||||    
T  41967909 gagacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtctcac 41967971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 844685 - 844842
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||  |||||||     
T  844685 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaag 844784  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  844785 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 844842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 6711007 - 6711164
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||  |||||||     
T  6711007 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaag 6711106  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||| ||||||||    
T  6711107 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtc 6711164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 41973124 - 41972963
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| |  ||||||||   | ||||||||| ||||||||||||| || ||| ||| ||| ||||||| ||||||||     
T  41973124 gtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaag 41973025  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||| |||||||||| |         || |||||||||||||  |||||||||||||||||    
T  41973024 ggacatgacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcac 41972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 45490836 - 45490993
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||||||||||| | ||||||||    | ||||||||| ||||||||||||| || ||| |   ||| ||||||| ||||||||     
T  45490836 gtttgatttgctaaaaaatgaaagacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaag 45490935  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| |||||||||| |         || ||||||||||||||||||||||||||||    
T  45490936 ggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 45490993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 51264708 - 51264551
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||||| |||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  51264708 gtttgatttgctaaaaaatgaaggacaagacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 51264609  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| |||||||||| |         || ||||||||||||||||||||||||||||    
T  51264608 ggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 51264551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 8839117 - 8838993
Alignment:
Q  81 agagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccgg 180  Q
    |||||| |||||||||||||||||||||| |||| | |||||||||  |||||||||| | ||||||||||||| || |||  |  ||| ||||||| ||    
T  8839117 agagtgcgtttgatttgctaaaaaatgaaggacaagacagaacaactccaattgtccaatgtttgatttgtaaaactgtttctggtacaagacaaactgg 8839018  T
Q  181 aggcaaaagacaggacaaaaactga 205  Q
    ||| ||  |||| ||||||||||||    
T  8839017 aggaaatggacatgacaaaaactga 8838993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 17888160 - 17888004
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| |||||| || ||||||   | |||||| || ||||||||||||| || ||| ||  ||| ||||||| ||||||||      
T  17888160 tttgatttgctaaaaaatgaatgacatgacaaaacaactctagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 17888061  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||||||||| |         || || |||||||||||||||||||||||||    
T  17888060 gacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtc 17888004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 6029292 - 6029419
Alignment:
Q  118 cagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnncct 217  Q
    |||||||||  || ||||||||| ||||||||||||| || ||| || ||||  |||||| | ||||||  ||||||||||||||||||        ||     
T  6029292 cagaacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactgaaatttttgtccc 6029391  T
Q  218 tcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||||||||||||||||||||||    
T  6029392 tcaccaaaccacaacacaactttttgtc 6029419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 46155124 - 46155054
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||||||| |||||| |||||||||   |||||| |||| |||||||||||||    
T  46155124 gtgtgtttgatttgctaaaaaatgaaggacatgacagaacaactctaattgttcagtgtttgatttgtaaa 46155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 7184131 - 7183974
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||  ||||||||| | ||||| ||| | | ||||||||| |||||| |||||| || ||| ||  ||| ||||||| ||||||||     
T  7184131 gtttgatttgctaaaatttgaaagacaggacagaataactttagttgtccagtgtttgatatgtaaaactgtttcaggtacaggacaaactggaggcaag 7184032  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || | ||||||||||||||||||||||||||    
T  7184031 ggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtc 7183974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 11772593 - 11772750
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||| |||||||| |||| | || ||||||  || ||||||||| ||||||||||||| || ||| ||  ||| | ||| | |||||||||    
T  11772593 gtttgatttgctagaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaaggcaatctggaggcaaa 11772692  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| ||||||||||||         || ||||||||||||| ||||||||||||||    
T  11772693 ggacaagacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtc 11772750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 44738003 - 44738160
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||| ||||||||||||||||||||| | |||||||||   ||||||||||| ||| ||||||||| || ||| ||  |||||||||   ||||||||     
T  44738003 gtttgttttgctaaaaaatgaaagacaagacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacatgacaacttggaggcaag 44738102  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||||||| |||||| |         || ||||||||||||| ||||||||||||||    
T  44738103 ggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc 44738160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 16437574 - 16437418
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| ||||    ||||||||   | ||||||| | ||||||||||||| || ||| ||  ||| |||||||  ||||||||     
T  16437574 tttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccaatgtttgatttgtaaaactgtttcagctacaggacaaactagaggcaaag 16437475  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  16437474 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 16437418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 252
Target Start/End: Complemental strand, 16451340 - 16451176
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | || ||||||   | ||||||| | ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  16451340 gtttgatttgttaaaaaatgaaggacaggacataacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 16451241  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
     ||||||||||||||| |         |  |||||||||||||||||||||||||||| ||||||    
T  16451240 ggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacata 16451176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 244
Target Start/End: Original strand, 32289305 - 32289461
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||  ||||||||     
T  32289305 gtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaag 32289404  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgt 244  Q
     |||| |||||||||| |         || ||||||||||||| |||||||||||||    
T  32289405 ggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgt 32289461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 24339599 - 24339714
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| | |||||||||   | |||| |||| ||||||||||| | || ||| ||  ||||||||||| ||||||||     
T  24339599 gtttgatttgctaaaaaataaaggacaggacagaacaactctagttgttcagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaag 24339698  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  24339699 ggacaggacaaaaact 24339714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 245
Target Start/End: Complemental strand, 5109946 - 5109784
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggag 182  Q
    |||| ||||||||||||||||||||||   || | |||||||||  || |||| |||| ||||||||||||| || ||| ||  ||| ||||||  ||||    
T  5109946 agtgcgtttgatttgctaaaaaatgaagtgcaggacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaattggag 5109847  T
Q  183 gcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||  ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  5109846 gcaagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactttttgtc 5109784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 38663320 - 38663254
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||| | |||||||||  || ||||||||| |||||||||||||    
T  38663320 gtttgatttgctaaaaaatgaaggacaagacagaacaactccagttgtccagtgtttgatttgtaaa 38663254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 250
Target Start/End: Complemental strand, 7837345 - 7837184
Alignment:
Q  90 ttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    |||||||||||||||| |||| || |||  |||||||| ||| |||| |||| ||||||||||||| || ||| ||  |||||||||||  |||||||      
T  7837345 ttgatttgctaaaaaaatgaaggatatgatagaacaacttcagttgttcagtgtttgatttgtaaaactgtttcaggaacatgacaaactagaggcaagg 7837246  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcaca 250  Q
    |||| |||||||| ||||        || | |||||| |||| |||||||||||||||||||    
T  7837245 gacatgacaaaaattgaattttttgtccattaccaaatcacatcacaactttttgtctcaca 7837184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 50540513 - 50540400
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||||||||||| || ||||||  ||| ||||||| ||||||||  ||||||||| ||||| |         |||||| ||||||||||    
T  50540513 ttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacataaactcatatttttgtccttcatcaaaccacaa 50540414  T
Q  232 cacaactttttgtc 245  Q
    ||||||||||||||    
T  50540413 cacaactttttgtc 50540400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 16704909 - 16704825
Alignment:
Q  118 cagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaac 202  Q
    ||||||||| ||||||||||| | ||||||||||||| || ||| ||  ||||||||||| ||||||||  |||| |||||||||    
T  16704909 cagaacaacttcaattgtccaatgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaac 16704825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 248
Target Start/End: Original strand, 17327610 - 17327770
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || ||||||   | ||||||||| ||| ||||||||| || ||| ||  ||| ||||||| |||| |||     
T  17327610 gtttgatttgctaaaaaatgaaggacaagacaaaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagtcaag 17327709  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctca 248  Q
     ||||||||||||||| |         || |||||||| |||| |||||||||||||||||    
T  17327710 ggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtctca 17327770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 203
Target Start/End: Complemental strand, 39282115 - 39281992
Alignment:
Q  80 tagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccg 179  Q
    ||||||| |||||||||||||||| ||||| |||||| ||  | ||| ||| |||| |||| ||||||||||||| || ||| ||  ||| |||||||      
T  39282115 tagagtgcgtttgatttgctaaaacatgaaggacatgacaagataacttcagttgttcagtgtttgatttgtaaaactgtttaaggtacaggacaaacta 39282016  T
Q  180 gaggcaaaagacaggacaaaaact 203  Q
    || ||||  |||||||||||||||    
T  39282015 gatgcaagggacaggacaaaaact 39281992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 42510738 - 42510623
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | ||| |||||   | ||||||||| ||||||| ||||| || ||| ||  ||| ||||||| |||| |||     
T  42510738 gtttgatttgctaaaaaatgaaggacaggacaggacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactggagacaag 42510639  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  42510638 ggacaggacaaaaact 42510623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 252
Target Start/End: Complemental strand, 1601389 - 1601222
Alignment:
Q  82 gagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccgga 181  Q
    ||||| ||||||||||||||||| ||||  ||||| ||||||||| | | |||| |||| ||||||||||||| |  ||| ||  ||| ||||||| |||    
T  1601389 gagtgcgtttgatttgctaaaaa-tgaagaacatgacagaacaactttagttgttcagtgtttgatttgtaaaacggtttcaggtacaggacaaactgga 1601291  T
Q  182 ggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
    |||||  || || ||||||||| |         || |||||||||||||||||||||||||||| ||||||    
T  1601290 ggcaagggatagaacaaaaactca--tttttgtccctcaccaaaccacaacacaactttttgtcccacata 1601222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 50382455 - 50382521
Alignment:
Q  179 ggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||  ||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  50382455 ggaggcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtc 50382521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 28340265 - 28340425
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||| |  ||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  28340265 gtttgatttgctaaaaaat-aaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 28340363  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||| |||||||||| |         || ||| ||||||||| ||||||||||||||||||    
T  28340364 ggacaagacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcac 28340425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 45659034 - 45658877
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||| |||||||| |||| | || ||||||  || ||||| ||| | ||||||||||| || ||| |   ||| ||||||| |||| ||||    
T  45659034 gtttgatttgctagaaaatgaaggacaggacaaaacaactccagttgtctagtgtctgatttgtaaaactgtttcaagtacaggacaaactggagacaaa 45658935  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| ||||||||||||         |  ||||||||||||||||||||||||||||    
T  45658934 ggacaagacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttgtc 45658877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 30105641 - 30105756
Alignment:
Q  89 tttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||| |||| |||| |  ||||||||   | ||||||||| ||||||||||||| || ||| ||  | | ||||||| ||||||||     
T  30105641 tttgatttgctaaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtaaaggacaaactggaggcaag 30105740  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  30105741 ggacaggacaaaaact 30105756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 51703124 - 51703191
Alignment:
Q  88 gtttgatttg-ctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||| |||||||||||| |||| | |||||||||   ||||||||||| |||||||||||||    
T  51703124 gtttgatttgactaaaaaatgaaggacaagacagaacaactctaattgtccagtgtttgatttgtaaa 51703191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 40811332 - 40811398
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||||| || |||||| | | ||||||||  |||||||| ||||    
T  40811332 gtttgatttgctaaaaaatgaaggacatgacaaaacaactttagttgtccagcgtttgatttataaa 40811398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 40856225 - 40856196
Alignment:
Q  223 aaaccacaacacaactttttgtctcacata 252  Q
    ||||||||||||||||||||||||||||||    
T  40856225 aaaccacaacacaactttttgtctcacata 40856196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 80 - 252
Target Start/End: Original strand, 41365988 - 41366160
Alignment:
Q  80 tagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccg 179  Q
    ||||||| ||||||||||||||||| ||||| ||| |  ||||||||  ||||||| || | |||||||||| || |  ||| || |||||||||||| |    
T  41365988 tagagtgcgtttgatttgctaaaaactgaaaaacaagatagaacaactccaattgtgcaatgtttgatttgtgaaacagtttcagggacatgacaaactg 41366087  T
Q  180 gaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
    ||||||| ||| |||||||||||||||        || ||||||||||||||||||| |||||||||||||||    
T  41366088 gaggcaagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacata 41366160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 6896372 - 6896215
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| |||||||||||||||| | ||||||||| ||| ||||||||| ||||||||||||| || ||| || ||||  |||||| ||||||||     
T  6896372 gtttgatttgttaaaaaatgaaagacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaaaacaaactggaggcaag 6896273  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||| ||||||||||        || ||||||||| ||| ||||||||||||||    
T  6896272 ggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtc 6896215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 248
Target Start/End: Original strand, 10399752 - 10399916
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||||||||||||||| ||||||  |||||||| ||| |||| |||| ||||||||||||| || ||| ||  ||| |||||||  || |    
T  10399752 gtgtgtttgatttgctaaaaaatgaaggacatgatagaacaacttcagttgttcagtgtttgatttgtaaaactatttcaggtacaggacaaactagatg 10399851  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctca 248  Q
    ||| | |||||||||||||| |         ||||||| ||||||||||||||||||||||||||    
T  10399852 caagatacaggacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctca 10399916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 32766390 - 32766544
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||| ||| ||||   |||||||||   ||||||||||| ||||||||||||| || ||| ||  ||||||||||| ||||||||     
T  32766390 gtttgatttgctaaaaaacgaaggacagaacagaacaactataattgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag 32766489  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaacttttt 242  Q
     |||||||||||||||||         || |||||||||||||||||||||||||    
T  32766490 ggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaacttttt 32766544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 7761459 - 7761620
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  |||||||||||  |||||||     
T  7761459 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaag 7761558  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||||||    
T  7761559 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcac 7761620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 33366818 - 33366650
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||||||||||||||| || ||| ||||||||    ||||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||    
T  33366818 gtgtgtttgatttgctaaaaaatgaaggatatgacagaacaattctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 33366719  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
    |||  ||||||||||||||| |          | ||||||||||||||||||||||||| || ||||||    
T  33366718 caagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttctcccacata 33366650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 245
Target Start/End: Complemental strand, 34339023 - 34338857
Alignment:
Q  79 ctagagtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaacc 178  Q
    |||| ||| |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||     
T  34339023 ctagggtgcgtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaact 34338924  T
Q  179 ggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||  ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  34338923 ggaggcaagggacaggacaaaaactcatatttttgaccctcaccaaaccacagcacaactttttgtc 34338857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 249
Target Start/End: Original strand, 16177765 - 16177930
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||||||||||||||| || ||| || ||||||  |||||||||||| ||||||||||||| || ||| |   ||| || |||| |||||    
T  16177765 gtgtgtttgatttgctaaaaaatgaaggatatgacataacaactccaattgtccagtgtttgatttgtaaaactgtttcaagtacaggataaactggagg 16177864  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    |||  ||||||||| |||||||         |  | ||||||||||||||||||||||||||||||    
T  16177865 caatggacaggacataaactgatatttttgtcgcttaccaaaccacaacacaactttttgtctcac 16177930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 84 - 252
Target Start/End: Original strand, 38623186 - 38623354
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||| |||||| |||| |||||| || |||||| ||| || |||| | ||||||||||||| || ||| || |||| |||||||  ||||    
T  38623186 gtgtgtttgatttgttaaaaattgaaggacatgacataacaacttcagttatccaatgtttgatttgtaaaactgtttcagggacaggacaaacttgagg 38623285  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
    |||  || | |||||||||||||        || ||||||||||||| |||||||||||||| ||||||    
T  38623286 caatggaaaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccacata 38623354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 93 - 249
Target Start/End: Original strand, 40832360 - 40832516
Alignment:
Q  93 atttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagaca 192  Q
    ||||||||||||| |||  ||||| || |||||| | | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||  ||||    
T  40832360 atttgctaaaaaaggaagcacatgacataacaacttaagttgtccagtgtttgatttgtaaagctatttcaggtacaagacaaactggaggcaagggaca 40832459  T
Q  193 ggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
    |||||||||| ||         || ||||||||||||||||||||||||||||||||    
T  40832460 ggacaaaaacggatatttttgtccctcaccaaaccacaacacaactttttgtctcac 40832516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 18686040 - 18685925
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| ||||| |||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||||||    
T  18686040 gtttgatttgctaaaaaatgaaggacatgacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaa 18685941  T
Q  188 agacaggacaaaaact 203  Q
     |||| ||||||||||    
T  18685940 ggacaagacaaaaact 18685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 32498119 - 32498004
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| | |||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||||||||||| | ||||||     
T  32498119 gtttgatttgctaaaaaatgaagggcatggcagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaag 32498020  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  32498019 ggacaggacaaaaact 32498004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 245
Target Start/End: Complemental strand, 37308865 - 37308702
Alignment:
Q  83 agtgtgtttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccgga 181  Q
    |||| |||||||||||||||||| |||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||    
T  37308865 agtgcgtttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgga 37308766  T
Q  182 ggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||||  ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  37308765 ggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 37308702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 28824443 - 28824509
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||||| ||||||||| ||| ||||||||| |||||||||||||    
T  28824443 gtttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaa 28824509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 242
Target Start/End: Complemental strand, 42365785 - 42365627
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||||||||||||||| |||||| || ||||||   | ||||| ||| ||||||||||||| |  ||| ||  ||||||||||| |||||    
T  42365785 gtgtgtttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaaccgtttcaggtacatgacaaactggagg 42365686  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaacttttt 242  Q
    |||  |||| |||||||||| |         |||||| |||||||||||||||||||||    
T  42365685 caagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaacttttt 42365627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 7259101 - 7258940
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||||| |||||||||   |  |||| ||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  7259101 gtttgatttgttaaaaaatgaaggacatgacagaacaactctagctgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 7259002  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||||||    
T  7259001 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcac 7258940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 9732816 - 9732973
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  9732816 gtttgatttgttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 9732915  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| |||||||||| |         || ||||||||||||||||||||||||||||    
T  9732916 ggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 9732973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 17540919 - 17540762
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| |||||||||||||| ||| ||||||||  | | ||||||||| ||||||||||||| || ||| |   ||| ||||||| ||||||||     
T  17540919 gtttgatttgttaaaaaatgaaagatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaag 17540820  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  17540819 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 17540762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 201
Target Start/End: Complemental strand, 39461522 - 39461405
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||||||||||||||| |||| |  |||||||  | | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||    
T  39461522 gtgtgtttgatttgctaaaaaatgaaggacaggatagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 39461423  T
Q  184 caaaagacaggacaaaaa 201  Q
    |||  |||||||||||||    
T  39461422 caagtgacaggacaaaaa 39461405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 44284833 - 44284672
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||||| |||||||||   | |||| |||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  44284833 gtttgatttgctaaaaaatgaaggacatgacagaacaactagagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 44284734  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||| |||||||||| |         || |||| |||||||| ||||||||||||||||||    
T  44284733 ggacaagacaaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcac 44284672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 244
Target Start/End: Original strand, 3913346 - 3913502
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || |||||| || |||||    | ||||||||| ||||||||||||| || ||| ||  | ||||||||| ||||||||     
T  3913346 gtttgatttgctaaaaaataaaggacatgacaaaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtatatgacaaactggaggcaag 3913445  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgt 244  Q
    | |||||||||||||| |         || |||||||||||||||||||||||||||    
T  3913446 aaacaggacaaaaactcacatgtttgtccctcaccaaaccacaacacaactttttgt 3913502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 33889447 - 33889290
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||| |||||||||||| |||| | |||||||||   | ||||| ||| |||||||||||||  | ||| ||| ||| ||||||| ||||||||     
T  33889447 gtttgatttactaaaaaatgaaggacaggacagaacaactctagttgtctagtgtttgatttgtaaaattgtttcagatacaggacaaactggaggcaag 33889348  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  33889347 ggacaggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtc 33889290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 252
Target Start/End: Original strand, 2644973 - 2645136
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| |  ||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||| ||    
T  2644973 gtttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggc-aa 2645071  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcacata 252  Q
     || |||||||||||| |         || ||||||||||||| |||||||||||||| ||||||    
T  2645072 ggagaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacata 2645136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 38992952 - 38993072
Alignment:
Q  83 agtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggag 182  Q
    |||| |||||||||| ||||||||||| |||||| ||||| |||  || ||||||||| ||||||||||||| |  ||| ||  | | ||||||| ||||    
T  38992952 agtgcgtttgatttgataaaaaatgaaggacatgacagaataactccagttgtccagtgtttgatttgtaaaacagtttcaggaagaggacaaactggag 38993051  T
Q  183 gcaaaagacaggacaaaaact 203  Q
    ||||  |||||||||||||||    
T  38993052 gcaagggacaggacaaaaact 38993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 30326218 - 30326333
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||| ||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||||      
T  30326218 gtttgatttgctaaaaaatgaaggacaggacagagcaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcagg 30326317  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  30326318 ggacaggacaaaaact 30326333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 37863254 - 37863349
Alignment:
Q  90 ttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggca 185  Q
    |||||||||||||||||||| |||||| |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| |||||||    
T  37863254 ttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 37863349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 40692501 - 40692386
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| ||| |||||| || || ||||||  ||| ||||||| |||| |||     
T  40692501 gtttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttaatttgtgaaactgttttaggtacaagacaaactggagacaag 40692402  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  40692401 ggacaggacaaaaact 40692386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 11115078 - 11115008
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||||||| |||| | || ||||||  |||||||||| | |||||||||||||    
T  11115078 gtgtgtttgatttgctaaaaaatgaaggacaggacaaaacaactccaattgtccaatgtttgatttgtaaa 11115008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 30713064 - 30712946
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| |||||||||||||||||| || ||||||  || || |||||| ||||||||||||  || ||| || ||||  |||| | ||||||||     
T  30713064 gtttgatttgttaaaaaatgaaagacatgacaaaacaactccagttatccagtgtttgatttgtaatactgtttcagggacagaacaacctggaggcaag 30712965  T
Q  188 agacaggacaaaaactgaa 206  Q
     ||||||||| ||||||||    
T  30712964 ggacaggacacaaactgaa 30712946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 16104434 - 16104317
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||||||||||| || ||| ||| ||| ||||||  ||||||||  ||||||||||||||| |         || |||||||||||||     
T  16104434 ttgtccagtgtttgatttgtaaaactgtttcagatacacgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacag 16104335  T
Q  232 cacaactttttgtctcac 249  Q
    ||||||||||||||||||    
T  16104334 cacaactttttgtctcac 16104317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 244
Target Start/End: Original strand, 26981606 - 26981751
Alignment:
Q  99 taaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaa 198  Q
    ||||||||||| ||||   |||||||||  || ||||||||| ||||||||||||| || ||  ||| ||| ||||||| ||||||||| |||| |||||    
T  26981606 taaaaaatgaaggacagaacagaacaactccagttgtccagtgtttgatttgtaaaactgttccagatacaagacaaacgggaggcaaatgacatgacaa 26981705  T
Q  199 aaactgaannnnnnnnccttcaccaaaccacaacacaactttttgt 244  Q
    ||||| |         || |||||||||||||||| ||||||||||    
T  26981706 aaactcatatttttgtccctcaccaaaccacaacaaaactttttgt 26981751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 30798375 - 30798487
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| | || | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||||||||||| ||||||||     
T  30798375 gtttgatttgctaaaaaatgaagggca-gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag 30798473  T
Q  188 agacaggacaaaaa 201  Q
     ||||||| |||||    
T  30798474 ggacaggaaaaaaa 30798487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 35114988 - 35114832
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| |||| | ||| |||||   | ||||| ||| ||||||||||||| || ||| ||  ||| |||||||  |||||||      
T  35114988 tttgatttgctaaaaaatgaaggacaagacaggacaactctagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 35114889  T
Q  189 gacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    ||||||||||||||| |         || ||||||||||||||||||| ||||||||    
T  35114888 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtc 35114832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 5278721 - 5278835
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    ||||||||||||||||||| || || ||| |||||||||   ||||||   || ||||||||||||| || ||| ||  ||||||||||| ||||||||     
T  5278721 gtttgatttgctaaaaaat-aaggatatgacagaacaactctaattgttaggtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag 5278819  T
Q  188 agacaggacaaaaact 203  Q
     |||||||||||||||    
T  5278820 ggacaggacaaaaact 5278835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 19513574 - 19513732
Alignment:
Q  88 gtttgatttgctaaaaaa-tgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||| ||||||||||||| |||| |||| | |||||||||   | || |||| | ||||||||||||| || ||| ||  ||| ||||||| ||||||||    
T  19513574 gtttcatttgctaaaaaaatgaaggacaggacagaacaactctagttttccaatgtttgatttgtaaaactgtttcaggtacaggacaaacgggaggcaa 19513673  T
Q  187 aagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    | ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  19513674 aggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 19513732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 37003777 - 37003846
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaa-ttgtccagtatttgatttgtaaatct 157  Q
    |||||||||||||||||||||| |||| | || |||||| |||| ||||||||| ||||||||||||||||    
T  37003777 gtttgatttgctaaaaaatgaaggacaggacataacaac-tcaagttgtccagtgtttgatttgtaaatct 37003846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 42706519 - 42706399
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||  || | |||||||||| |         || ||||||||||||||    
T  42706519 ttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaactcatatttttgtccctcaccaaaccacaa 42706420  T
Q  232 cacaactttttgtctcacata 252  Q
    |||||||||||||| ||||||    
T  42706419 cacaactttttgtcccacata 42706399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 2086266 - 2086169
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaa 186  Q
    |||||||||||||||||||||| |||| | |||| ||||   | ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||    
T  2086266 gtttgatttgctaaaaaatgaaggacaagacaga-caactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaa 2086169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 4641590 - 4641556
Alignment:
Q  218 tcaccaaaccacaacacaactttttgtctcacata 252  Q
    ||||||||||||| |||||||||||||||||||||    
T  4641590 tcaccaaaccacagcacaactttttgtctcacata 4641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 9717405 - 9717339
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||| | |||||||||   | |||| |||| |||||||||||||    
T  9717405 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaa 9717339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 12939204 - 12939270
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    ||||||||| |||||||||||| || | | ||||||||| ||| ||||||||| |||||||| ||||    
T  12939204 gtttgatttactaaaaaatgaaggataagacagaacaacttcagttgtccagtgtttgatttataaa 12939270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 27462688 - 27462842
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||  ||||| |||||||||| |  | |||||  ||| ||||||||| ||||||||||||| || ||||||  ||||||||||| | || |||     
T  27462688 gtttgattttttaaaagatgaaagacaggatataacaatttcagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactgtagacaag 27462787  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaacttttt 242  Q
     |||| ||||||| |||          || |||||||||||||||||||||||||    
T  27462788 ggacaagacaaaagctgttatttttgtccctcaccaaaccacaacacaacttttt 27462842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 18793180 - 18793217
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaac 126  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  18793180 tttgatttgctaaaaaatgaaggacatgacagaacaac 18793217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 11114821 - 11114761
Alignment:
Q  343 ttgttatgttttgtgttgcattgttctgtcttgtactattatgttcaatacttattgtttt 403  Q
    ||||| ||| ||||||||  |||||||||||||||| |||||||| | |||||| ||||||    
T  11114821 ttgttctgtcttgtgttgtgttgttctgtcttgtacaattatgtttagtacttactgtttt 11114761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 84 - 245
Target Start/End: Original strand, 42839 - 42999
Alignment:
Q  84 gtgtgtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggagg 183  Q
    |||||||||||||| ||||||||||| || | | ||||||||| || || ||||||| ||||||||||||| || ||| || ||||  |||||| |||||    
T  42839 gtgtgtttgatttgttaaaaaatgaaggataagacagaacaac-tccatagtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggagg 42937  T
Q  184 caaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
    |||  ||||| ||||||||||||        || ||||||||||||||||||||||||||||    
T  42938 caagggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtc 42999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 1535 - 1692
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| ||||   ||||||||| ||| || |||||| ||||||||||||| || ||| |  || | ||||||| ||||||||     
T  1535 gtttgatttgttaaaaaatgaaggacaaaacagaacaacttcagttctccagtgtttgatttgtaaaactgtttcaaggataggacaaactggaggcaag 1634  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| |||||||||||||        || ||||||||||||||||||||||||||||    
T  1635 ggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtc 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 15376 - 15215
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | || ||||||   ||||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||     
T  15376 gtttgatttgctaaaaaatgaaggacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 15277  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtctcac 249  Q
     |||| |||||||||| |         ||  |||||||||||||||||||||||||||||||    
T  15276 ggacaagacaaaaactcatatttttgtcccccaccaaaccacaacacaactttttgtctcac 15215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 5332 - 5444
Alignment:
Q  89 tttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaa 188  Q
    ||||||||||||||||||||| ||||   ||||||||| ||| ||||||||| ||||||||||||| || ||| ||  ||| ||||||| ||||||||      
T  5332 tttgatttgctaaaaaatgaaggacagaacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 5431  T
Q  189 gacaggacaaaaa 201  Q
    |||||||||||||    
T  5432 gacaggacaaaaa 5444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 13579 - 13736
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||| ||||||||||| |||| | |||||||||  || ||||||||| |||||||||||||  | ||| || ||||  |||||| ||||||||     
T  13579 gtttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaag 13678  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     || |||||||||||||||        || |||||||||||||  |||||||||||||    
T  13679 ggataggacaaaaactgaaatttttgtccctcaccaaaccacagtacaactttttgtc 13736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 23779 - 23622
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| | || | |||||||||   | ||||||||| ||||||||||||| || ||| ||  ||| |||||||  |||||||     
T  23779 gtttgatttgctaaaaaatgaagggcaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaag 23680  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     |||| |||||||||| |         |||||||||||||||| ||||||||||||||    
T  23679 ggacatgacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtc 23622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 4471 - 4628
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| | |||||||||   | ||||||||| |||||||||||||  |  |||||  | |  |||||  ||||||||     
T  4471 gtttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaag 4570  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||||||||||||||||||    
T  4571 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtc 4628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 17990 - 18103
Alignment:
Q  132 ttgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaaagacaggacaaaaactgaannnnnnnnccttcaccaaaccacaa 231  Q
    ||||||||| ||||||||||||| || ||| ||  ||||||||||  ||||||||  ||||||||||||||| |         || ||||||||||||||    
T  17990 ttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaa 18089  T
Q  232 cacaactttttgtc 245  Q
    ||||||||||||||    
T  18090 cacaactttttgtc 18103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 51642 - 51576
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||| ||||||||||| ||||   ||||||||| | ||||||||||| |||||||||||||    
T  51642 gtttgatttgataaaaaatgaaggacaaaacagaacaactttaattgtccagtgtttgatttgtaaa 51576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 102153 - 102087
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaa 154  Q
    |||||||||||||||||||||| |||||| |||||||||   | || |||||| |||||||||||||    
T  102153 gtttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaa 102087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 245
Target Start/End: Original strand, 2231 - 2387
Alignment:
Q  88 gtttgatttgctaaaaaatgaaagacatgtcagaacaacatcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaaccggaggcaaa 187  Q
    |||||||||||||||||||||| |||| |  |||||||| | | || | |||| ||||||||||||| || ||| ||  ||| ||||||  ||||||||     
T  2231 gtttgatttgctaaaaaatgaaggacaggatagaacaactttagtt-ttcagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaag 2329  T
Q  188 agacaggacaaaaactgaannnnnnnnccttcaccaaaccacaacacaactttttgtc 245  Q
     ||||||||||||||| |         || ||||||||||||| ||||||||||||||    
T  2330 ggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtc 2387  T

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