View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2375_low_2 (Length: 798)

Name: NF2375_low_2
Description: NF2375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2375_low_2
NF2375_low_2
[»] chr6 (21 HSPs)
chr6 (11-307)||(30487096-30487393)
chr6 (357-657)||(30487443-30487746)
chr6 (696-778)||(30487763-30487842)
chr6 (224-292)||(4097684-4097754)
chr6 (221-303)||(10818376-10818460)
chr6 (223-301)||(1390481-1390561)
chr6 (217-303)||(9721134-9721222)
chr6 (223-301)||(34176497-34176576)
chr6 (222-287)||(9051710-9051775)
chr6 (224-303)||(9719034-9719115)
chr6 (221-303)||(16737996-16738080)
chr6 (224-286)||(26318482-26318546)
chr6 (262-307)||(31849266-31849311)
chr6 (222-307)||(665842-665928)
chr6 (216-251)||(4097504-4097539)
chr6 (222-261)||(31799131-31799170)
chr6 (226-301)||(19278039-19278116)
chr6 (224-291)||(31849113-31849182)
chr6 (222-292)||(10818230-10818302)
chr6 (270-303)||(12811034-12811067)
chr6 (415-460)||(14515476-14515521)
[»] chr2 (17 HSPs)
chr2 (222-307)||(23748251-23748338)
chr2 (223-303)||(40022533-40022615)
chr2 (222-304)||(9631719-9631803)
chr2 (222-300)||(35736350-35736430)
chr2 (226-291)||(8427043-8427110)
chr2 (262-303)||(1583237-1583278)
chr2 (222-292)||(22356175-22356247)
chr2 (223-287)||(36046378-36046443)
chr2 (222-287)||(15224870-15224937)
chr2 (222-303)||(19566821-19566904)
chr2 (222-285)||(7681422-7681485)
chr2 (224-300)||(31795772-31795850)
chr2 (238-286)||(39821686-39821736)
chr2 (222-297)||(17380007-17380084)
chr2 (221-292)||(36046204-36046277)
chr2 (415-460)||(17379849-17379894)
chr2 (419-460)||(36046401-36046442)
[»] chr7 (22 HSPs)
chr7 (222-303)||(4833532-4833615)
chr7 (222-303)||(18231746-18231829)
chr7 (222-303)||(41496958-41497041)
chr7 (222-302)||(33519209-33519291)
chr7 (216-292)||(47391027-47391105)
chr7 (222-301)||(48881559-48881640)
chr7 (222-287)||(37925842-37925909)
chr7 (222-287)||(39856041-39856108)
chr7 (222-303)||(40196533-40196616)
chr7 (222-302)||(30592254-30592336)
chr7 (224-303)||(42306490-42306571)
chr7 (222-262)||(36267554-36267594)
chr7 (223-258)||(16833684-16833719)
chr7 (52-102)||(25875200-25875251)
chr7 (222-302)||(28074104-28074186)
chr7 (414-460)||(39856060-39856106)
chr7 (224-287)||(43230239-43230304)
chr7 (414-460)||(47390858-47390904)
chr7 (222-292)||(13425121-13425193)
chr7 (419-460)||(25887195-25887236)
chr7 (262-303)||(33655151-33655192)
chr7 (222-288)||(36267728-36267796)
[»] chr4 (26 HSPs)
chr4 (222-307)||(49735469-49735556)
chr4 (222-303)||(54935229-54935312)
chr4 (216-275)||(53260713-53260772)
chr4 (222-303)||(45742050-45742133)
chr4 (223-303)||(27735905-27735987)
chr4 (222-287)||(6938423-6938490)
chr4 (222-302)||(41174506-41174588)
chr4 (222-301)||(37711285-37711366)
chr4 (222-303)||(31348317-31348405)
chr4 (217-287)||(54935063-54935136)
chr4 (224-291)||(46007873-46007942)
chr4 (222-287)||(54320436-54320502)
chr4 (222-300)||(54320597-54320677)
chr4 (222-307)||(1968352-1968439)
chr4 (222-287)||(1968535-1968602)
chr4 (222-287)||(5730831-5730898)
chr4 (222-287)||(56135750-56135817)
chr4 (225-303)||(29798445-29798521)
chr4 (222-302)||(37761625-37761707)
chr4 (414-461)||(46007896-46007943)
chr4 (413-460)||(49735686-49735733)
chr4 (224-262)||(4437428-4437466)
chr4 (223-302)||(54576329-54576410)
chr4 (222-288)||(22186720-22186788)
chr4 (222-284)||(31348500-31348564)
chr4 (415-460)||(54320630-54320675)
[»] chr1 (19 HSPs)
chr1 (222-303)||(2858933-2859016)
chr1 (222-307)||(38509895-38509982)
chr1 (222-303)||(40094934-40095017)
chr1 (222-292)||(35349467-35349537)
chr1 (223-303)||(12234170-12234252)
chr1 (222-303)||(30010492-30010575)
chr1 (222-303)||(41498564-41498648)
chr1 (222-303)||(32951322-32951402)
chr1 (222-262)||(20607420-20607460)
chr1 (222-287)||(35349638-35349705)
chr1 (222-291)||(40095106-40095177)
chr1 (225-301)||(8529961-8530039)
chr1 (222-286)||(41498405-41498471)
chr1 (224-301)||(26940847-26940925)
chr1 (414-460)||(35349657-35349703)
chr1 (418-460)||(51303387-51303429)
chr1 (222-288)||(525275-525343)
chr1 (222-288)||(28770896-28770964)
chr1 (225-262)||(35513000-35513037)
[»] chr8 (19 HSPs)
chr8 (222-303)||(31543073-31543156)
chr8 (225-307)||(30479721-30479805)
chr8 (222-302)||(43732848-43732930)
chr8 (224-303)||(16653109-16653190)
chr8 (217-307)||(34634299-34634391)
chr8 (222-287)||(8815317-8815384)
chr8 (222-302)||(30365291-30365373)
chr8 (227-287)||(36309019-36309081)
chr8 (222-284)||(11033420-11033482)
chr8 (222-301)||(11785688-11785769)
chr8 (414-460)||(31543267-31543313)
chr8 (222-292)||(3726864-3726936)
chr8 (225-287)||(7394637-7394701)
chr8 (222-302)||(34196470-34196550)
chr8 (222-287)||(1027024-1027091)
chr8 (222-286)||(31543249-31543315)
chr8 (222-301)||(31738585-31738666)
chr8 (222-292)||(12022314-12022386)
chr8 (224-302)||(16024315-16024394)
[»] chr5 (30 HSPs)
chr5 (223-303)||(1657973-1658055)
chr5 (222-292)||(37551576-37551648)
chr5 (222-292)||(37654406-37654478)
chr5 (222-303)||(37607054-37607137)
chr5 (222-303)||(37779263-37779346)
chr5 (222-303)||(13634871-13634954)
chr5 (226-307)||(36363188-36363271)
chr5 (223-303)||(7544296-7544378)
chr5 (224-292)||(11757074-11757144)
chr5 (222-301)||(8502836-8502917)
chr5 (222-303)||(14245089-14245172)
chr5 (222-303)||(14245206-14245289)
chr5 (222-303)||(16938639-16938722)
chr5 (217-287)||(20147051-20147118)
chr5 (223-303)||(26415053-26415136)
chr5 (223-287)||(34980812-34980878)
chr5 (222-284)||(13634712-13634776)
chr5 (222-301)||(40305671-40305747)
chr5 (222-262)||(10476231-10476271)
chr5 (222-287)||(26414894-26414961)
chr5 (263-303)||(36392194-36392234)
chr5 (217-251)||(10072653-10072687)
chr5 (223-303)||(10650429-10650513)
chr5 (414-460)||(13634714-13634760)
chr5 (224-262)||(21581150-21581188)
chr5 (222-251)||(2184028-2184057)
chr5 (262-303)||(2550395-2550436)
chr5 (414-459)||(2550547-2550592)
chr5 (415-460)||(14245242-14245287)
chr5 (415-460)||(16938482-16938527)
[»] scaffold0240 (1 HSPs)
scaffold0240 (222-288)||(17715-17781)
[»] scaffold0067 (2 HSPs)
scaffold0067 (222-303)||(39187-39271)
scaffold0067 (217-287)||(39366-39438)
[»] chr3 (14 HSPs)
chr3 (222-286)||(24253722-24253789)
chr3 (223-301)||(41110323-41110403)
chr3 (222-303)||(24560377-24560460)
chr3 (223-303)||(16275707-16275789)
chr3 (222-302)||(34641151-34641233)
chr3 (227-301)||(27541937-27542013)
chr3 (227-287)||(10943790-10943852)
chr3 (222-302)||(24253883-24253965)
chr3 (222-301)||(9312477-9312553)
chr3 (224-290)||(28581189-28581257)
chr3 (222-287)||(18654601-18654668)
chr3 (225-259)||(27197687-27197721)
chr3 (222-301)||(41039951-41040032)
chr3 (223-301)||(26135959-26136039)
[»] scaffold0262 (1 HSPs)
scaffold0262 (222-303)||(16297-16380)
[»] scaffold0198 (1 HSPs)
scaffold0198 (224-303)||(3150-3231)
[»] scaffold0012 (1 HSPs)
scaffold0012 (225-286)||(184784-184847)
[»] scaffold0007 (1 HSPs)
scaffold0007 (225-302)||(242377-242456)


Alignment Details
Target: chr6 (Bit Score: 248; Significance: 1e-137; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 11 - 307
Target Start/End: Original strand, 30487096 - 30487393
Alignment:
Q  11 caaaggtggatagaaatagaggaaaccgtgattacgactattaggatttacgcggaagcaagaccccaaaatcgggagctcgtgataccatgcaagggta 110  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30487096 caaagttggatagaaacagaggaaaccgtgattacgactattaggatttacgcggaagcaagaccccaaaatcgggagctcgtgataccatgcaagggta 30487195  T
Q  111 tacgatacgcaccaccgaggtggaggtggccgacttaattacatcagtcactatatgggacggtcgacccacgaagacattactcggcctcaagtgggaa 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30487196 tacgatacgcaccaccgaggtggaggtggccgacttaattacatcagtcactatatgggacggtcgacccacgaagacattactcggcctcaagcgggaa 30487295  T
Q  211 ttgacaattatgggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||| ||||||||  |||||||||||||||||||    
T  30487296 ttgacaattaagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatgtcttt 30487393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 357 - 657
Target Start/End: Original strand, 30487443 - 30487746
Alignment:
Q  357 acacttgatttattttataaaaaaatgctataaagtccgtagtttnnnnnnnnnnnctaaaccctccactcccctcccctcataaaccctcaatcgaaac 456  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||           ||||||||||||||||| ||||||| ||||||||||||||||||    
T  30487443 acacttgatttattttataaaaacatgttatatagtccgtagtttaaaaaataaaactaaaccctccactcccttcccctcctaaaccctcaatcgaaac 30487542  T
Q  457 acactagcatgtgttactctcagccaccacgtggtagcatattaatctttgggacaggttccccacctggatttggacatgacaatgaaactgaaattca 556  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30487543 acactagcatgtgttactctcagccaccacgtagtagcataataatctttgggacaggttccccacctggatttggacatgacaatgaaactgaaattca 30487642  T
Q  557 tggttctgatagccataaagtttcttgacttcccatggagaatgaagaagagaatcc---nnnnnnnnctcgctatatttttcctatcttctattattac 653  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||| ||||||||||||||||    
T  30487643 tggttctgatagccataaagtttcttgacttcccatggagaatgaagaagagaatcctttttttttttctcgctatatttttcttatcttctattattac 30487742  T
Q  654 tttt 657  Q
    ||||    
T  30487743 tttt 30487746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 696 - 778
Target Start/End: Original strand, 30487763 - 30487842
Alignment:
Q  696 agctattagtaggtttaatggaatgagctaacctcttacaacataggaaacaatggtttgaatcccaatcgagagaagtgcgt 778  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||| ||||||||||||||||    
T  30487763 agctattagtaggtttaatggaatgagctaacctcttacaacatagcaaaca---gtttgaatcccgatcgagagaagtgcgt 30487842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 4097754 - 4097684
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||| ||||||||||||||| |||||||||  ||||||||||||| |||||||||||| ||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggaca 4097684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 10818460 - 10818376
Alignment:
Q  221 tgggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||| ||| ||||| |||||  |||||||||  |||| |||||||||||||||||||| |||| ||||||||||    
T  10818460 tgggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgt 10818376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 1390561 - 1390481
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggagggggg--ttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||||| |||||||| ||||| || ||||| |||  || |||||||||||||||||||| |||| ||||||||    
T  1390561 ggtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaat 1390481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 9721134 - 9721222
Alignment:
Q  217 attatgggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||| |||||||||||||| || |||||| ||||| |||||||||  ||||| | |||||||||||||||||| |||| |||| |||||    
T  9721134 attaagggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatgt 9721222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 34176576 - 34176497
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaa-agggaggggggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    ||||||||||||||||||||||| ||||||| || || | | ||| | |||||||||||||||||| |||| ||||||||    
T  34176576 ggtgtgtttggatggagggtttatgagggaagagagatgagagtttagttttcatttttaaattacggacactatgaaat 34176497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 9051775 - 9051710
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg-ggttcacttttcatttttaaattac 287  Q
    |||||||||||||| ||||||||||||||| ||||||||||  | |||||||| |||||||||||||    
T  9051775 gggtgtgtttggattgagggtttaagaggggaagggaggggatgctcactttt-atttttaaattac 9051710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 9719034 - 9719115
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||| ||||||||| ||||| |||||||||  || || | |||||||||||||||||| |||| |||| |||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatgt 9719115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 16737996 - 16738080
Alignment:
Q  221 tgggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||||||||| | ||| ||||||  | || ||||||| |||||||||||  || | ||||||||||    
T  16737996 tgggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatgt 16738080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 26318546 - 26318482
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaatta 286  Q
    |||||||||||||||| ||||| ||||||||||||||||  | || ||||||| |||||||||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaatta 26318482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 31849311 - 31849266
Alignment:
Q  262 gggttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  31849311 gggttcacttttcatttttaaattacggacactataaaatgtcttt 31849266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 665842 - 665928
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    ||||||||||||||| |||||||| ||||| ||| ||||||  |||||| |||||||||||||||||   | | ||||||||||||||    
T  665842 gggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtcttt 665928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 4097539 - 4097504
Alignment:
Q  216 aattatgggtgtgtttggatggagggtttaagaggg 251  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4097539 aattaagggtgtgtttggatggagggtttaagaggg 4097504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 31799170 - 31799131
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg 261  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  31799170 gggtgtgtttggatgaagagtttaagagggaaagggaggg 31799131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 301
Target Start/End: Original strand, 19278039 - 19278116
Alignment:
Q  226 gtgtttggatggagggtttaagagggaaagggag--gggggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||||||||||| ||||| |||| ||  | | ||| |||||||||||||||||||| |||| ||| ||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaat 19278116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 31849113 - 31849182
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagac 291  Q
    ||||||| |||| ||||||||||||||| |||||||||  ||||| | ||||| |||||||| |||||||    
T  31849113 gtgtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagac 31849182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 10818230 - 10818302
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||| ||||||||| ||||| ||||||||||   ||| | ||||| |||||||||||| ||||    
T  10818230 gggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggaca 10818302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 12811034 - 12811067
Alignment:
Q  270 ttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||| ||||||||||    
T  12811034 ttttcatttttaaattacagacactatgaaatgt 12811067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 460
Target Start/End: Complemental strand, 14515521 - 14515476
Alignment:
Q  415 aaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  14515521 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 14515476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 23748338 - 23748251
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    |||||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||||| ||| |||| ||||||||||||||    
T  23748338 gggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttt 23748251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 40022615 - 40022533
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||| |||||||||||||||||||||  ||||||||||  |||| || |||||||||||||||||||||| ||||||||||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgt 40022533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 9631803 - 9631719
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggag--gggggttcacttttcatttttaaattacagacagtatgaaatgtc 304  Q
    |||||||||||||||||||||||| |||||||||||||  | ||||| ||||||| |||||||||||| ||||  ||||||||||    
T  9631803 gggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatgtc 9631719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 35736430 - 35736350
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaa 300  Q
    |||||||||||||||||||||||| ||||  |||||||||  ||| ||||||||| |||||||||| | |||| |||||||    
T  35736430 gggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaa 35736350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 8427110 - 8427043
Alignment:
Q  226 gtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagac 291  Q
    |||||||||| ||||||||| |||||||||||||||  | ||| |||||||||||||||| |||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagac 8427043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 1583278 - 1583237
Alignment:
Q  262 gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  1583278 gggttcacttttcatttttaaattacggacactatgaaatgt 1583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 22356247 - 22356175
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||| |||| |||| ||||| |||||||||  ||||||| ||||| |||||||||||| ||||    
T  22356247 gggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggaca 22356175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 36046443 - 36046378
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggagggg-ggttcacttttcatttttaaattac 287  Q
    ||||||||||||| ||||||||| ||||| |||||||||| |||| ||||||  ||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggaggtttacttttgttttttaaattac 36046378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 15224937 - 15224870
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattac 287  Q
    ||||||||||||||  |||||||| ||||| ||||||||||  |||| ||||||| ||||||||||||    
T  15224937 gggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattac 15224870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 19566821 - 19566904
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaaggga--ggggggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||| |||| |||||  |||||||| ||  || ||||| |||| ||| |||||||||||||||| ||||||||||    
T  19566821 gggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaatgt 19566904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 7681485 - 7681422
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaatt 285  Q
    |||| ||||||||| ||||||||||| ||| ||||| || ||||| |||||| |||||||||||    
T  7681485 gggtttgtttggatcgagggtttaagcggggaaggggggagggtttactttttatttttaaatt 7681422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 31795772 - 31795850
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggggggttc--acttttcatttttaaattacagacagtatgaaa 300  Q
    |||||||||||||||||||||| ||||  |||||||||| |  |  ||||||| |||||||||||| |||| |||||||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaa 31795850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 39821686 - 39821736
Alignment:
Q  238 agggtttaagagggaaagggaggg--gggttcacttttcatttttaaatta 286  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  39821686 agggtttaagagggaaatggaggggagggtttacttttcatttttaaatta 39821736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 17380084 - 17380007
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatg 297  Q
    |||||||||||||| ||||||||| ||||| ||| ||||||  ||||   |||||||||||||||||| |||| ||||    
T  17380084 gggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 36046204 - 36046277
Alignment:
Q  221 tgggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagaca 292  Q
    ||||||||||||||||||||||||| ||||| ||  |||||  | ||| | |||||||||||||||||| ||||    
T  36046204 tgggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggaca 36046277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 460
Target Start/End: Complemental strand, 17379894 - 17379849
Alignment:
Q  415 aaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  17379894 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 17379849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 460
Target Start/End: Original strand, 36046401 - 36046442
Alignment:
Q  419 cctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||    
T  36046401 cctcccctcccttcccctcataaaccctcaatccaaacacac 36046442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 4833532 - 4833615
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||| ||||||||||||||||||| ||||| ||||||||||  |||| ||||||||||||||||||||||||| ||||||||||    
T  4833532 gggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgt 4833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 18231829 - 18231746
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||| ||||| ||||| |||||||||  || || ||||||||||||||||||||| ||| ||||||||||    
T  18231829 gggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgt 18231746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 41496958 - 41497041
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| ||||| ||||||||||  | || |||||| ||||||||||||| |||| || |||||||    
T  41496958 gggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgt 41497041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 33519291 - 33519209
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    |||||||||||||||||||||||| ||||| |||||||||  ||| | ||||||| | ||||||||||||||| ||| |||||    
T  33519291 gggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatg 33519209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 47391105 - 47391027
Alignment:
Q  216 aattatgggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagaca 292  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||  | |||   |||||||||||||||||| ||||    
T  47391105 aattaagggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggaca 47391027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 48881559 - 48881640
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||||||||||||||| ||||| ||||||||||  || | ||||||| |||||||||||| |||| ||| ||||    
T  48881559 gggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaat 48881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 37925842 - 37925909
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    |||||||||||||| ||||||||| ||||| |||||||||  ||||||||||||  ||||||||||||    
T  37925842 gggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattac 37925909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 39856108 - 39856041
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    |||||||||||||| ||||||||| ||||| |||||||||  ||||| ||||||| ||||||||||||    
T  39856108 gggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattac 39856041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 40196533 - 40196616
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagg--gaggggggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||  ||||| ||||  |||| ||||| ||||||||||||| |||||| |||| ||| ||||||    
T  40196533 gggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgt 40196616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 30592254 - 30592336
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaaggga--ggggggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    |||||| |||||||||||| |||| ||||||||||||  || ||| | ||||||| ||||||||||||||||| ||| |||||    
T  30592254 gggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatg 30592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 42306571 - 42306490
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||| ||||||||| ||||| ||  ||||||  |||| | |||||||||||||||||| |||| ||||||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgt 42306490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 36267554 - 36267594
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg 262  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  36267554 gggtgtgtttggatggagggtttaggaggggaagggagggg 36267594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 16833684 - 16833719
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaaggga 258  Q
    ||||||||||||| ||||||||||||||||||||||    
T  16833684 ggtgtgtttggattgagggtttaagagggaaaggga 16833719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 25875251 - 25875200
Alignment:
Q  52 taggatttacgcggaagcaagaccccaaaa-tcgggagctcgtgataccatg 102  Q
    |||| |||| |||||||| ||||||||||| |||||||||||||||||||||    
T  25875251 tagggtttatgcggaagcgagaccccaaaaatcgggagctcgtgataccatg 25875200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 28074104 - 28074186
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggggg--ttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    |||||||||||||| || |||||| ||||| |||||||||| |   ||||||||| |||||||||||| |||| ||| |||||    
T  28074104 gggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaatg 28074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 460
Target Start/End: Original strand, 39856060 - 39856106
Alignment:
Q  414 taaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  39856060 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 39856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 43230239 - 43230304
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    |||||||||||| | ||||||||||| |||||| ||||  ||||| ||||||| ||||||||||||    
T  43230239 gtgtgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattac 43230304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 460
Target Start/End: Complemental strand, 47390904 - 47390858
Alignment:
Q  414 taaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  47390904 taaaccctccactcccttcccctcctaacccctcaatccaaacacac 47390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 13425121 - 13425193
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagg--gaggggggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||| ||||||||| ||||| ||||  ||||  |||| | |||| ||||||||||||||||||    
T  13425121 gggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagaca 13425193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 460
Target Start/End: Complemental strand, 25887236 - 25887195
Alignment:
Q  419 cctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||    
T  25887236 cctcccctcccttcccctcataaaccctcaatccaaacacac 25887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 33655151 - 33655192
Alignment:
Q  262 gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||| |||||||||||||||||||| |||| ||||||||||    
T  33655151 gggtttacttttcatttttaaattacggacactatgaaatgt 33655192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 36267796 - 36267728
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattaca 288  Q
    |||||||||||||| ||||||||| ||||| |||||||||  ||| ||| ||||  |||||||||||||    
T  36267796 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattaca 36267728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 5e-21; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 49735469 - 49735556
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    |||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||||||||||||||||| ||||  |||||||||||||    
T  49735469 gggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtcttt 49735556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 54935312 - 54935229
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| ||||| |||||||||  ||||| | |||||||||||||||||| |||| ||||||||||    
T  54935312 gggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatgt 54935229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 53260713 - 53260772
Alignment:
Q  216 aattatgggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttca 275  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  53260713 aattaagggtgtgtttggatggagggtttaggaggggaagggaggggggttcacttttca 53260772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 45742133 - 45742050
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||| |||||||| | |||||||||||||  | ||| |||||||||||||||||||| |||| ||||||||||    
T  45742133 gggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgt 45742050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 27735987 - 27735905
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggagg--ggggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||| ||||| ||||||||   ||||||| |||||||||||||||||| |||| ||| ||||||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgt 27735905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 6938490 - 6938423
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattac 287  Q
    ||||||||||||||||| |||||| ||||| || |||||||  |||||||||||||||||||||||||    
T  6938490 gggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattac 6938423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 41174588 - 41174506
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    |||||||||||||||||||||||| ||||| ||||||||||  |||| | ||||||||||||| |||  |||| |||||||||    
T  41174588 gggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatg 41174506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 37711366 - 37711285
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||||||||||||||| ||||| |||||||||  ||||| |  ||||||||||||||||| |||| ||| ||||    
T  37711366 gggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaat 37711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 31348317 - 31348405
Alignment:
Q  222 gggtgtgtttggatggagggtttaa-----gagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||||      ||||| |||||||||  ||||| |||||||||||||||||||| |||| ||||||||||    
T  31348317 gggtgtgtttggatggagggtttagtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgt 31348405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 54935063 - 54935136
Alignment:
Q  217 attatgggtgtgtttggatggagggtttaagagggaaagggaggg---gggttcacttttcatttttaaattac 287  Q
    |||| |||||||||||||| ||||||||| ||||| |||||||||   ||||| ||||||| ||||||||||||    
T  54935063 attaagggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattac 54935136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 46007942 - 46007873
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagac 291  Q
    |||||||||||| ||||||||| ||||| |||||||||  ||||| ||||||| |||||||||| |||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagac 46007873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 54320436 - 54320502
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg-gggttcacttttcatttttaaattac 287  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||   ||||| ||||||||||||    
T  54320436 gggtgtgtttggattgagggtttaggagggaaagggagggagggtttgattttcttttttaaattac 54320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 54320677 - 54320597
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaa 300  Q
    |||||||||||||| ||||||||| ||||| |||||||||  |||||   |||| ||||||||||||| |||| |||||||    
T  54320677 gggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaa 54320597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 1968352 - 1968439
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    ||||| ||||||||  ||||||| ||||||||||||||||  ||||| |||||||| | ||||||||  |||| |||||||| |||||    
T  1968352 gggtgcgtttggattaagggtttgagagggaaagggaggggagggtttacttttcaatattaaattatggacactatgaaatatcttt 1968439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 1968602 - 1968535
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    |||||||||||||| ||||||||| ||||| |||||||||  | ||| | ||||||||||||||||||    
T  1968602 gggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattac 1968535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 5730831 - 5730898
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaaggga--ggggggttcacttttcatttttaaattac 287  Q
    |||||||||||||||||||||||| ||||||||| ||  || ||||| |  |||||||||||||||||    
T  5730831 gggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattac 5730898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 56135750 - 56135817
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    |||||||||||||| ||||||||| ||||| |||||||||  ||||||| ||||  ||||||||||||    
T  56135750 gggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattac 56135817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 29798521 - 29798445
Alignment:
Q  225 tgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||| ||||| |||  ||| ||  | ||||||| |||||||||||||||||| |||| ||||||||||    
T  29798521 tgtgtttggatggagagtttaggagaaaaatgg--gagggttcagttttcatttttaaattacggacactatgaaatgt 29798445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 37761707 - 37761625
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    ||||||||||||||||||| ||||| |||| |||||||||  ||| |  |||||| |||||||||||  |||| |||||||||    
T  37761707 gggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggacattatgaaatg 37761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 461
Target Start/End: Original strand, 46007896 - 46007943
Alignment:
Q  414 taaaccctccactcccctcccctcataaaccctcaatcgaaacacact 461  Q
    |||||||||| ||||| ||||||| ||||||||||||| |||||||||    
T  46007896 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacact 46007943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 460
Target Start/End: Original strand, 49735686 - 49735733
Alignment:
Q  413 ctaaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    ||||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  49735686 ctaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 49735733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 4437428 - 4437466
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggagggg 262  Q
    |||||||||||||||||||||| || |||||||||||||    
T  4437428 gtgtgtttggatggagggtttaggatggaaagggagggg 4437466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 54576329 - 54576410
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    |||||||||||||||||||||||  |||| |||||||||  ||| | ||||||| |||||| ||||| |||| ||| |||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatg 54576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 22186720 - 22186788
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattaca 288  Q
    |||||| ||||||| ||||||||| || || |||||||||  | |||||||||| ||||||||||||||    
T  22186720 gggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattaca 22186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 31348564 - 31348500
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaat 284  Q
    |||||||||||||| ||| ||||| ||||| |||||||||  ||||| ||||||| |||||||||    
T  31348564 gggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 460
Target Start/End: Original strand, 54320630 - 54320675
Alignment:
Q  415 aaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  54320630 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 54320675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 5e-21; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 2858933 - 2859016
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||||| ||||||||||||  ||||||||||    
T  2858933 gggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgt 2859016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 38509895 - 38509982
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||  ||||||||||||||||||||||||| |||| ||||||||||||||    
T  38509895 gggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtcttt 38509982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 40094934 - 40095017
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| ||||| |||| |||||  |||| |||||||||||||||||||| |||| ||||||||||    
T  40094934 gggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgt 40095017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 35349467 - 35349537
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||||||||||||||||||| | ||| || ||||| |||||||||||||||||||| ||||    
T  35349467 gggtgtgtttggatggagggtttaagaggggagggggggagggtttacttttcatttttaaattacggaca 35349537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 12234252 - 12234170
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||| ||||| |||||||||  ||||| | |||||||||||||||||| |||| || |||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatgt 12234170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 30010575 - 30010492
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||||  |||| |||||||||  ||||| |||||||||||| ||||||| |||| || |||||||    
T  30010575 gggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgt 30010492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 41498648 - 41498564
Alignment:
Q  222 gggtgtgtttggatggagggtttaagaggga-aagggagggggg--ttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||| ||||| |||||  |||||||||| |  || |||||||||||||||||||| |||| ||||||||||    
T  41498648 gggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgt 41498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 32951322 - 32951402
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||| |||  | ||||||| |||||||||||  | |||||||||||||||||||| ||||  |||||||||    
T  32951322 gggtgtgtttggatgaaggactcaagaggggaagggagggggtat-acttttcatttttaaattacggacacaatgaaatgt 32951402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 20607460 - 20607420
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg 262  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  20607460 gggtgtgtttggatggagggtttaggaggggaagggagggg 20607420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 35349705 - 35349638
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    ||||||||||||||  |||||||| ||||| |||||||||  ||||| ||||||| ||||||||||||    
T  35349705 gggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattac 35349638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 40095177 - 40095106
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagac 291  Q
    |||||||||||||| |||||||||  ||| ||||||| ||  ||||| ||||||| ||||||||||||||||    
T  40095177 gggtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattacagac 40095106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 8530039 - 8529961
Alignment:
Q  225 tgtgtttggatggagggtttaagagggaaagggaggggg--gttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||| || ||||| ||||| |||||||| |   ||| |||||||||||||||||||| |||| ||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaat 8529961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 41498405 - 41498471
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaatta 286  Q
    |||||||||||||| ||||||||| ||||| ||| |||||  ||||| ||||||| |||||||||||    
T  41498405 gggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 26940847 - 26940925
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg-gggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    ||||||||| || ||||||||||||| |||  |  ||| |||||||||||| |||||||||||| ||||| ||||||||    
T  26940847 gtgtgtttgaattgagggtttaagagtgaagagatgggagggttcactttttatttttaaattatagacactatgaaat 26940925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 460
Target Start/End: Original strand, 35349657 - 35349703
Alignment:
Q  414 taaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    |||||||||| ||||| |||||||||||||||| |||| ||||||||    
T  35349657 taaaccctcccctcccttcccctcataaacccttaatccaaacacac 35349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 418 - 460
Target Start/End: Complemental strand, 51303429 - 51303387
Alignment:
Q  418 ccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||    
T  51303429 ccctcccctcccctcccctcctaaaccctcaatccaaacacac 51303387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 525343 - 525275
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattaca 288  Q
    |||||||||||||| ||||||||| || || |||||| ||  | |||||||||| ||||||||||||||    
T  525343 gggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattaca 525275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 28770964 - 28770896
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaaggga--ggggggttcacttttcatttttaaattaca 288  Q
    ||||||||||||||||| |||||| |||||||| |||  || ||||| | |||| ||||||||||||||    
T  28770964 gggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattaca 28770896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 35513037 - 35513000
Alignment:
Q  225 tgtgtttggatggagggtttaagagggaaagggagggg 262  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggagggg 35513000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 31543073 - 31543156
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||| ||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||| || | ||||||||||    
T  31543073 gggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgt 31543156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 225 - 307
Target Start/End: Original strand, 30479721 - 30479805
Alignment:
Q  225 tgtgtttggatggagggtttaagagggaaagggagggggg--ttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    |||||||||||||||| |||| |||||  | ||||||| |  |||||||||||||||||||||||||||| ||||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtcttt 30479805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 43732930 - 43732848
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    |||||||||||||||||||||||| ||||| |||||||||  ||||| ||||||| |||||||||||| |||| ||| |||||    
T  43732930 gggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 43732848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 16653190 - 16653109
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||| | |||||||||||| |||||||| |  |||| | |||||||||||||||||| |||| ||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgt 16653109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 34634391 - 34634299
Alignment:
Q  217 attatgggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    |||| |||||||||||||||||| ||||| ||||| |||||| | |  |||||| |||| ||||||||||||| |||| |||||||| |||||    
T  34634391 attaagggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatatcttt 34634299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 8815384 - 8815317
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    |||||||||||||| ||||||||| |||||  ||||||||  |||||||||||| |||||||||||||    
T  8815384 gggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattac 8815317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 30365373 - 30365291
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    ||||||||||||||||||| ||||  |||| ||||||||||  || |  |||||| ||||||||||||||||| |||||||||    
T  30365373 gggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattacagacattatgaaatg 30365291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 36309081 - 36309019
Alignment:
Q  227 tgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    ||||||||||||||||||| ||||| |||||||||  ||||| ||||||||| ||||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattac 36309019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 11033420 - 11033482
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaat 284  Q
    |||||||||||||| |||||||||  || | |||||||||||||| ||||||| |||||||||    
T  11033420 gggtgtgtttggattgagggtttagaagaggaagggaggggggtttacttttcttttttaaat 11033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 11785769 - 11785688
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaaggga--ggggggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||||||||||||||| ||||| ||| ||  || |||||   |||||||||||||||||| |||| ||||||||    
T  11785769 gggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaat 11785688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 460
Target Start/End: Original strand, 31543267 - 31543313
Alignment:
Q  414 taaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  31543267 taaaccctcccctcccttcccctcctaaaccctcaatcgaaacacac 31543313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 3726864 - 3726936
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaaggg--aggggggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||||||||||||| ||||| |||||  |||  |||| | |||||||||||||||||| ||||    
T  3726864 gggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggaca 3726936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 7394701 - 7394637
Alignment:
Q  225 tgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattac 287  Q
    ||||||||||| ||||||||| ||||| ||||||||||  |||||||||||  ||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattac 7394637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 34196550 - 34196470
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg-gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    ||||| |||||||||||||||||| ||||| ||||| ||| ||| | ||||||| ||||||||||||||||| ||| |||||    
T  34196550 gggtgcgtttggatggagggtttaggaggggaagggggggagggcttacttttc-tttttaaattacagacattataaaatg 34196470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 1027091 - 1027024
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    ||||||||||||||  |||||||| || || |||||||||  ||||||||||||| ||||||||||||    
T  1027091 gggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattac 1027024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 31543315 - 31543249
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaatta 286  Q
    |||||||||| ||| ||||||||| ||||| ||||||||||  |||| ||||||| |||||||||||    
T  31543315 gggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 31738666 - 31738585
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||||||||||||||| ||||| |||  ||||  ||||| |  ||||||||||||||||| |||| ||| ||||    
T  31738666 gggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaat 31738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 12022386 - 12022314
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||| ||||||||| ||||| || ||||||  ||| ||||||||  |||||||||||| ||||    
T  12022386 gggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggaca 12022314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 302
Target Start/End: Complemental strand, 16024394 - 16024315
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    ||||||||||||||||| |||| ||||| |||||||||  | ||| ||||||| |||||||||||| |||| ||| |||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacggacattataaaatg 16024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 5e-18; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 1658055 - 1657973
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||| ||||| |||||||||  ||||| |||||||||||||||||||| |||| ||| ||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgt 1657973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 37551648 - 37551576
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||||||||||||| ||||||||||||| ||  |||| |||||||||||||||| ||||||||    
T  37551648 gggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagaca 37551576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 37654478 - 37654406
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||||||||||||| ||||||||||||| ||  |||| |||||||||||||||| ||||||||    
T  37654478 gggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagaca 37654406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 37607137 - 37607054
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggag--gggggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| |||||||||||||  |  |||| |||||||||||||||| |||||| | ||||||||||    
T  37607137 gggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgt 37607054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 37779346 - 37779263
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggag--gggggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| |||||||||||||  |  |||| |||||||||||||||| |||||| | ||||||||||    
T  37779346 gggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgt 37779263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 13634954 - 13634871
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||| ||||||||| ||||| |||||||||  ||| | ||||||||||||||||||||  ||| ||||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgt 13634871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 36363271 - 36363188
Alignment:
Q  226 gtgtttggatggagggtttaagagggaaagggagggggg--ttcacttttcatttttaaattacagacagtatgaaatgtcttt 307  Q
    |||||||||||||||||||| ||||| |||||||| | |  ||||||||||||||||||||||| || | ||| ||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttt 36363188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 7544378 - 7544296
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||| ||||| |||| ||||  |||||   |||||||||||||||||| |||| ||||||||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgt 7544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 11757144 - 11757074
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagaca 292  Q
    |||||||||||||||||||||||||||| |||||||||  ||||| |  ||||||||||||||||| ||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggaca 11757074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 8502836 - 8502917
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    ||||||||||||||||| |||||| || || || ||| |||  ||||||||||||||||||||||||| |||| ||||||||    
T  8502836 gggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaat 8502917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 14245089 - 14245172
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||| ||||||||| ||||| |||||||||  || || ||||||| |||||||||||| |||| | ||||||||    
T  14245089 gggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgt 14245172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 14245289 - 14245206
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||| ||||||||| ||||| |||||||||  |||||   |||||||||||||||||| |||| | ||||||||    
T  14245289 gggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgt 14245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 16938722 - 16938639
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| ||| | || |||||||  |||| |  ||||||||||||||||| |||| ||||||||||    
T  16938722 gggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgt 16938639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 20147118 - 20147051
Alignment:
Q  217 attatgggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaattac 287  Q
    |||| |||||||||||||| ||||||||| ||||| ||||||   ||||| ||||||||||||||||||||    
T  20147118 attaagggtgtgtttggattgagggtttaggaggggaaggga---gggtttacttttcatttttaaattac 20147051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 26415136 - 26415053
Alignment:
Q  223 ggtgtgtttggatggagggtttaagaggga-aagggagggggg--ttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||||||||||||||||||||| |||||  || ||||||| |  || ||||||||||||||| ||||||||| ||||||||||    
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatgt 26415053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 34980812 - 34980878
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    ||||||||||||| || |||||| ||||| |||||||||  |||||||||||| |||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattac 34980878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 13634712 - 13634776
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaat 284  Q
    |||||||||||||| ||||||||| ||||| |||||||||  ||||| ||||||| |||||||||    
T  13634712 gggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 40305671 - 40305747
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||||||||||||||| ||||| |||||||||    | | ||||| ||||||||||||||||| ||| ||||    
T  40305671 gggtgtgtttggatggagggtttaggaggggaagggagggc---ttagttttcttttttaaattacagacattataaaat 40305747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 10476271 - 10476231
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggg 262  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  10476271 gggtgtgtttggatggagggtttaggaggggaagggagggg 10476231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 26414894 - 26414961
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    |||||||||||||| ||||||||| ||||  |||||||||  ||||| ||||||| ||||||||||||    
T  26414894 gggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattac 26414961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 36392194 - 36392234
Alignment:
Q  263 ggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||| ||||||||||||||||||||||||| ||||||||||    
T  36392194 ggtttacttttcatttttaaattacagacactatgaaatgt 36392234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 10072653 - 10072687
Alignment:
Q  217 attatgggtgtgtttggatggagggtttaagaggg 251  Q
    |||| ||||||||||||||||||||||||||||||    
T  10072653 attaagggtgtgtttggatggagggtttaagaggg 10072687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 10650429 - 10650513
Alignment:
Q  223 ggtgtgtttggatggagggtttaagaggg--aaagggagggggg--ttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||| ||||||||||||| |||| |||||  ||||||||||| |  || |||||| ||||||||||||| |||| ||||||||||    
T  10650429 ggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgt 10650513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 460
Target Start/End: Complemental strand, 13634760 - 13634714
Alignment:
Q  414 taaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  13634760 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 13634714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 21581188 - 21581150
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggagggg 262  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  21581188 gtgtgtttggatggagggtttaggaggggaagggagggg 21581150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 251
Target Start/End: Complemental strand, 2184057 - 2184028
Alignment:
Q  222 gggtgtgtttggatggagggtttaagaggg 251  Q
    ||||||||||||||||||||||||||||||    
T  2184057 gggtgtgtttggatggagggtttaagaggg 2184028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 2550395 - 2550436
Alignment:
Q  262 gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||    
T  2550395 gggtttacttttcatttttaaattacagacactatgatatgt 2550436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 2550547 - 2550592
Alignment:
Q  414 taaaccctccactcccctcccctcataaaccctcaatcgaaacaca 459  Q
    |||||||||| ||||| ||||||| ||||||||||||| |||||||    
T  2550547 taaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 460
Target Start/End: Original strand, 14245242 - 14245287
Alignment:
Q  415 aaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  14245242 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 14245287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 460
Target Start/End: Complemental strand, 16938527 - 16938482
Alignment:
Q  415 aaaccctccactcccctcccctcataaaccctcaatcgaaacacac 460  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  16938527 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 16938482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 17781 - 17715
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaattaca 288  Q
    |||||||||||||||||||||||| ||| | |||||||||||||| ||||||| |||||||||||||    
T  17781 gggtgtgtttggatggagggtttaggagtggaagggaggggggtttacttttcttttttaaattaca 17715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 39187 - 39271
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggg---gttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| ||||| ||  |||||||   ||| |||||||||||||||||||| |||| ||||||||||    
T  39187 gggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgt 39271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 39438 - 39366
Alignment:
Q  217 attatgggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattac 287  Q
    |||| |||||||||||||| |||||||||  ||||||||||||||  ||||| ||||||| ||||||||||||    
T  39438 attaagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattac 39366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 24253722 - 24253789
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggg---gttcacttttcatttttaaatta 286  Q
    |||||||||||||| ||||||||| |||||||||||||||||   |||||||||| ||||||||||||    
T  24253722 gggtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaatta 24253789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 41110323 - 41110403
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||||||||||||||| |||| ||||| |||||||| |  |||| |||||||||||||||||||| |||| ||||||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaat 41110403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 24560460 - 24560377
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggagggggg--ttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||||||||||| ||||| || ||| ||| |  || |||||||||||||||||||| |||| ||||||||||    
T  24560460 gggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgt 24560377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 16275707 - 16275789
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||||||| ||||||  ||||||||||||||  | ||||||| |||||||||||||| | |||| ||||||||||    
T  16275707 ggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgt 16275789  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 34641233 - 34641151
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    |||||||||||||||||||||||| ||||| |||||||||  ||| | ||||||| |||||||||||| |||| ||| |||||    
T  34641233 gggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatg 34641151  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 27541937 - 27542013
Alignment:
Q  227 tgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    ||||||||| ||||||||| ||||| |||||||| |  ||||||| |||||||||||||||| ||||| ||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaat 27542013  T

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Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 10943852 - 10943790
Alignment:
Q  227 tgtttggatggagggtttaagagggaaagggagggg--ggttcacttttcatttttaaattac 287  Q
    ||||||||| ||||||||| ||||||||| ||||||  ||||||||||| |||||||||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattac 10943790  T

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Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 24253965 - 24253883
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    ||||||||||||||||||||||||  |||| |||||||||  || || ||||||| |||||||||||| |||| ||| |||||    
T  24253965 gggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatg 24253883  T

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Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 9312477 - 9312553
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggggggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||| ||||||||| |||||||||| |||| |||||||||   ||   ||||||||||||||||||||||| ||||||||    
T  9312477 gggtatgtttggattgagggtttaataggggaagggaggg---tttgattttcatttttaaattacagacactatgaaat 9312553  T

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Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 28581189 - 28581257
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacaga 290  Q
    ||||||||||||||||||||||  || | |||||||||  ||||| | |||||||||||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattacaga 28581257  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 18654601 - 18654668
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaaggga--ggggggttcacttttcatttttaaattac 287  Q
    |||||||||||||||||||||||| ||||||||| ||  || ||||| |  |||||||||||||||||    
T  18654601 gggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattac 18654668  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 27197687 - 27197721
Alignment:
Q  225 tgtgtttggatggagggtttaagagggaaagggag 259  Q
    ||||||||||| |||||||||||||||||||||||    
T  27197687 tgtgtttggatagagggtttaagagggaaagggag 27197721  T

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Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 41039951 - 41040032
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    ||||||||||||||||| |||||| ||||| ||| ||| |  || || | |||||| |||||||||||||||| ||||||||    
T  41039951 gggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaat 41040032  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 26136039 - 26135959
Alignment:
Q  223 ggtgtgtttggatggagggtttaagagggaaaggga--ggggggttcacttttcatttttaaattacagacagtatgaaat 301  Q
    |||||| ||| |||||||||||| ||||| ||||||  || ||||| ||||||| |||||||||||| |||| ||| ||||    
T  26136039 ggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaat 26135959  T

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Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 16297 - 16380
Alignment:
Q  222 gggtgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||| ||||||||||||||||||| |||||||| ||||||  ||||| |||||||||||||||||||   ||| ||||||||||    
T  16297 gggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgt 16380  T

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Target: scaffold0198 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 3150 - 3231
Alignment:
Q  224 gtgtgtttggatggagggtttaagagggaaagggagggggg--ttcacttttcatttttaaattacagacagtatgaaatgt 303  Q
    |||||||||||| ||| ||||| ||||| |||||||||| |  || ||||||| ||||||||||||||||| ||||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgt 3231  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  225 tgtgtttggatggagggtttaagagggaaaggga--ggggggttcacttttcatttttaaatta 286  Q
    ||||||||||||||||||||| ||||||||||||  || ||||| ||| ||| |||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 242456 - 242377
Alignment:
Q  225 tgtgtttggatggagggtttaagagggaaagggaggg--gggttcacttttcatttttaaattacagacagtatgaaatg 302  Q
    |||||||||||||| ||||||  |||| |||||||||  ||||| ||||||| |||||||||||| |||| ||| |||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 242377  T

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