View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2375_low_22 (Length: 336)

Name: NF2375_low_22
Description: NF2375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2375_low_22
NF2375_low_22
[»] chr3 (49 HSPs)
chr3 (9-315)||(41158818-41159124)
chr3 (149-282)||(41155045-41155178)
chr3 (216-283)||(41028938-41029005)
chr3 (195-280)||(4534445-4534531)
chr3 (190-254)||(37138236-37138300)
chr3 (190-277)||(25964332-25964419)
chr3 (196-282)||(1395567-1395653)
chr3 (195-277)||(48528473-48528555)
chr3 (224-277)||(16790181-16790234)
chr3 (195-280)||(48588560-48588645)
chr3 (225-285)||(905055-905115)
chr3 (223-279)||(22214772-22214828)
chr3 (198-282)||(25185891-25185974)
chr3 (222-282)||(44374732-44374792)
chr3 (195-262)||(24158610-24158677)
chr3 (198-249)||(24625378-24625429)
chr3 (223-278)||(39971242-39971297)
chr3 (230-276)||(20173982-20174028)
chr3 (232-282)||(20192694-20192744)
chr3 (196-282)||(24235771-24235857)
chr3 (232-282)||(24605104-24605154)
chr3 (224-282)||(40122840-40122898)
chr3 (224-282)||(54775052-54775110)
chr3 (217-282)||(38462198-38462263)
chr3 (208-272)||(28283675-28283739)
chr3 (198-282)||(32064338-32064422)
chr3 (195-262)||(5430921-5430988)
chr3 (239-282)||(48364967-48365010)
chr3 (224-282)||(16790444-16790502)
chr3 (236-282)||(25129766-25129812)
chr3 (224-282)||(27792796-27792854)
chr3 (221-287)||(34318009-34318075)
chr3 (194-280)||(36193607-36193692)
chr3 (196-262)||(44488780-44488846)
chr3 (232-282)||(49546575-49546625)
chr3 (222-279)||(2128342-2128399)
chr3 (230-279)||(2825085-2825134)
chr3 (217-282)||(3015937-3016001)
chr3 (212-281)||(35708231-35708300)
chr3 (232-281)||(42039091-42039140)
chr3 (238-279)||(44014218-44014259)
chr3 (233-282)||(53736201-53736250)
chr3 (222-282)||(3182450-3182510)
chr3 (230-282)||(12923413-12923465)
chr3 (223-275)||(27294279-27294331)
chr3 (230-282)||(33434095-33434146)
chr3 (230-282)||(49587004-49587055)
chr3 (229-277)||(50760543-50760591)
chr3 (194-282)||(52450140-52450228)
[»] chr4 (48 HSPs)
chr4 (196-282)||(19422314-19422400)
chr4 (194-282)||(21593099-21593187)
chr4 (198-283)||(969432-969517)
chr4 (203-282)||(24160583-24160662)
chr4 (190-279)||(39178341-39178431)
chr4 (195-288)||(30079468-30079561)
chr4 (224-281)||(51555956-51556013)
chr4 (209-277)||(30207663-30207731)
chr4 (230-282)||(47970248-47970300)
chr4 (224-282)||(4191663-4191722)
chr4 (224-279)||(30024624-30024679)
chr4 (224-262)||(4663804-4663842)
chr4 (209-283)||(9319282-9319356)
chr4 (195-261)||(9843775-9843841)
chr4 (211-281)||(25487634-25487704)
chr4 (230-276)||(28623219-28623265)
chr4 (232-282)||(51044547-51044597)
chr4 (225-282)||(27671920-27671977)
chr4 (221-282)||(49219060-49219121)
chr4 (197-282)||(51098212-51098297)
chr4 (232-280)||(4798649-4798697)
chr4 (225-293)||(8422914-8422982)
chr4 (225-289)||(11802460-11802523)
chr4 (221-277)||(32066502-32066558)
chr4 (195-278)||(14011129-14011212)
chr4 (223-282)||(30743289-30743347)
chr4 (223-282)||(54325125-54325184)
chr4 (196-282)||(7029319-7029405)
chr4 (222-279)||(15511425-15511483)
chr4 (196-282)||(23815266-23815352)
chr4 (230-276)||(24936240-24936286)
chr4 (232-278)||(25717434-25717480)
chr4 (224-282)||(36734817-36734875)
chr4 (238-279)||(6364087-6364128)
chr4 (221-282)||(22684604-22684665)
chr4 (217-254)||(24193502-24193539)
chr4 (211-260)||(27321941-27321990)
chr4 (221-278)||(35743225-35743282)
chr4 (197-282)||(37733896-37733981)
chr4 (221-277)||(486002-486058)
chr4 (218-282)||(2169946-2170010)
chr4 (234-282)||(3662283-3662330)
chr4 (231-279)||(7601690-7601738)
chr4 (230-282)||(8130104-8130156)
chr4 (231-279)||(11389457-11389505)
chr4 (218-282)||(32724037-32724101)
chr4 (198-282)||(42321967-42322051)
chr4 (239-283)||(44119249-44119293)
[»] chr1 (46 HSPs)
chr1 (197-282)||(4202217-4202302)
chr1 (195-281)||(41638399-41638485)
chr1 (216-288)||(870961-871033)
chr1 (196-272)||(29046011-29046087)
chr1 (223-277)||(172264-172318)
chr1 (198-279)||(52286576-52286657)
chr1 (223-279)||(49557064-49557120)
chr1 (198-292)||(2233296-2233391)
chr1 (233-282)||(15360827-15360876)
chr1 (222-279)||(16982027-16982084)
chr1 (225-282)||(36641800-36641857)
chr1 (217-282)||(42336579-42336644)
chr1 (222-282)||(7274027-7274087)
chr1 (230-282)||(17269180-17269232)
chr1 (196-248)||(26179389-26179441)
chr1 (196-279)||(30815726-30815810)
chr1 (230-282)||(46499942-46499994)
chr1 (242-282)||(49517012-49517052)
chr1 (238-282)||(50319230-50319274)
chr1 (225-296)||(1224512-1224582)
chr1 (223-282)||(4200152-4200211)
chr1 (223-282)||(23895259-23895318)
chr1 (231-282)||(37818395-37818446)
chr1 (211-278)||(42397674-42397741)
chr1 (239-282)||(48830164-48830207)
chr1 (232-282)||(3052771-3052821)
chr1 (233-279)||(4768915-4768961)
chr1 (230-272)||(13037794-13037836)
chr1 (185-279)||(33339511-33339605)
chr1 (231-277)||(45769836-45769882)
chr1 (221-282)||(48282054-48282116)
chr1 (233-282)||(1730825-1730874)
chr1 (232-277)||(15579415-15579460)
chr1 (223-288)||(16980749-16980814)
chr1 (222-283)||(23373377-23373438)
chr1 (195-276)||(34619472-34619553)
chr1 (233-273)||(1201316-1201356)
chr1 (231-279)||(4549797-4549845)
chr1 (246-282)||(14737793-14737829)
chr1 (197-282)||(17423026-17423109)
chr1 (195-227)||(21516253-21516285)
chr1 (232-276)||(27140417-27140461)
chr1 (196-248)||(29665884-29665936)
chr1 (231-279)||(37841929-37841977)
chr1 (232-280)||(38651499-38651547)
chr1 (195-227)||(39348481-39348513)
[»] chr5 (36 HSPs)
chr5 (197-281)||(40499764-40499848)
chr5 (196-288)||(11095551-11095643)
chr5 (222-282)||(20982223-20982283)
chr5 (211-282)||(29117018-29117089)
chr5 (217-279)||(27106014-27106076)
chr5 (233-282)||(7096215-7096264)
chr5 (213-282)||(35095871-35095940)
chr5 (221-277)||(26516219-26516275)
chr5 (230-282)||(35135750-35135802)
chr5 (231-279)||(40048371-40048419)
chr5 (196-279)||(4855594-4855677)
chr5 (224-282)||(6739796-6739854)
chr5 (224-277)||(13224353-13224406)
chr5 (217-282)||(37063162-37063227)
chr5 (230-282)||(18704124-18704175)
chr5 (231-279)||(33459026-33459074)
chr5 (230-282)||(39128569-39128621)
chr5 (217-276)||(10391270-10391329)
chr5 (217-272)||(14714937-14714992)
chr5 (198-245)||(34198333-34198380)
chr5 (198-273)||(36638644-36638719)
chr5 (224-275)||(40097498-40097549)
chr5 (224-282)||(17756817-17756875)
chr5 (230-276)||(29588810-29588856)
chr5 (234-276)||(34117627-34117669)
chr5 (195-248)||(1084228-1084281)
chr5 (217-282)||(6738495-6738560)
chr5 (217-282)||(19438198-19438263)
chr5 (236-280)||(26209504-26209546)
chr5 (224-281)||(29115302-29115359)
chr5 (232-281)||(34690806-34690855)
chr5 (222-282)||(912737-912797)
chr5 (199-279)||(11054085-11054165)
chr5 (239-279)||(12407752-12407792)
chr5 (232-288)||(31208405-31208461)
chr5 (222-282)||(31694440-31694500)
[»] chr6 (40 HSPs)
chr6 (195-282)||(4006609-4006696)
chr6 (196-282)||(8470076-8470162)
chr6 (196-282)||(281936-282026)
chr6 (217-282)||(2514619-2514684)
chr6 (196-285)||(11340710-11340798)
chr6 (230-282)||(24836287-24836339)
chr6 (186-282)||(28531629-28531725)
chr6 (199-274)||(5554861-5554936)
chr6 (221-276)||(33068655-33068710)
chr6 (224-282)||(5328898-5328956)
chr6 (223-273)||(31461601-31461651)
chr6 (224-286)||(31670959-31671021)
chr6 (234-279)||(507154-507199)
chr6 (221-282)||(4248879-4248940)
chr6 (202-283)||(8010259-8010339)
chr6 (224-285)||(21959652-21959713)
chr6 (221-282)||(22742287-22742348)
chr6 (203-276)||(27889937-27890010)
chr6 (195-248)||(31958682-31958735)
chr6 (221-282)||(32975899-32975960)
chr6 (222-282)||(8420285-8420345)
chr6 (233-285)||(29940729-29940781)
chr6 (223-282)||(4420540-4420599)
chr6 (230-273)||(7148597-7148640)
chr6 (223-282)||(29274317-29274376)
chr6 (231-277)||(9559634-9559680)
chr6 (217-278)||(27727165-27727227)
chr6 (224-274)||(31668781-31668831)
chr6 (239-281)||(34544539-34544581)
chr6 (212-277)||(3169338-3169403)
chr6 (232-273)||(4247731-4247772)
chr6 (225-282)||(10452448-10452505)
chr6 (221-282)||(13360656-13360717)
chr6 (229-282)||(20671953-20672006)
chr6 (232-277)||(31672002-31672047)
chr6 (225-277)||(1810393-1810445)
chr6 (223-279)||(2206513-2206569)
chr6 (230-282)||(6654545-6654597)
chr6 (231-275)||(12631543-12631587)
chr6 (197-261)||(33823389-33823453)
[»] chr7 (43 HSPs)
chr7 (198-282)||(5276122-5276206)
chr7 (208-300)||(35536015-35536109)
chr7 (223-282)||(2223071-2223130)
chr7 (196-279)||(21853207-21853290)
chr7 (195-282)||(27121674-27121760)
chr7 (196-287)||(28515190-28515281)
chr7 (224-274)||(2013123-2013173)
chr7 (240-282)||(5006597-5006639)
chr7 (222-280)||(5373147-5373205)
chr7 (224-282)||(7244626-7244684)
chr7 (195-269)||(25507246-25507320)
chr7 (222-288)||(25511549-25511615)
chr7 (232-282)||(28165023-28165073)
chr7 (221-279)||(44241781-44241839)
chr7 (208-277)||(5005900-5005969)
chr7 (221-282)||(31341115-31341176)
chr7 (196-277)||(46091492-46091573)
chr7 (222-282)||(1431396-1431456)
chr7 (223-275)||(6552365-6552417)
chr7 (230-282)||(24973874-24973926)
chr7 (194-282)||(27626212-27626300)
chr7 (232-276)||(33894555-33894599)
chr7 (227-279)||(34441016-34441068)
chr7 (222-282)||(49060462-49060522)
chr7 (196-278)||(991965-992048)
chr7 (238-277)||(1432060-1432099)
chr7 (239-282)||(36532290-36532333)
chr7 (225-280)||(46213728-46213783)
chr7 (224-279)||(47395189-47395244)
chr7 (217-296)||(12835009-12835090)
chr7 (212-282)||(29574689-29574759)
chr7 (239-277)||(35007543-35007581)
chr7 (196-254)||(39539877-39539935)
chr7 (244-282)||(39591555-39591593)
chr7 (224-282)||(45593807-45593865)
chr7 (217-274)||(3610836-3610893)
chr7 (233-282)||(35808992-35809041)
chr7 (198-259)||(38713200-38713261)
chr7 (217-273)||(22388001-22388057)
chr7 (222-278)||(24975826-24975882)
chr7 (241-281)||(28178910-28178950)
chr7 (221-273)||(28844407-28844459)
chr7 (238-282)||(42656453-42656497)
[»] chr2 (41 HSPs)
chr2 (223-282)||(10143095-10143154)
chr2 (217-282)||(28803594-28803659)
chr2 (217-282)||(33197327-33197392)
chr2 (196-276)||(10150651-10150731)
chr2 (222-293)||(10198555-10198626)
chr2 (217-280)||(15173443-15173506)
chr2 (221-300)||(43431514-43431593)
chr2 (231-285)||(25609727-25609781)
chr2 (189-282)||(14277982-14278075)
chr2 (217-281)||(34339040-34339104)
chr2 (230-293)||(13864580-13864643)
chr2 (223-282)||(17952789-17952848)
chr2 (230-279)||(3673737-3673786)
chr2 (225-282)||(31461363-31461420)
chr2 (221-282)||(35809854-35809914)
chr2 (231-279)||(3611157-3611205)
chr2 (230-282)||(11344372-11344424)
chr2 (197-261)||(26484193-26484257)
chr2 (222-282)||(37766720-37766780)
chr2 (223-282)||(27288556-27288615)
chr2 (231-282)||(33576682-33576733)
chr2 (231-278)||(34054993-34055040)
chr2 (244-279)||(38916397-38916432)
chr2 (232-282)||(5045245-5045295)
chr2 (236-278)||(5133708-5133750)
chr2 (229-292)||(5511494-5511559)
chr2 (236-282)||(32098396-32098442)
chr2 (224-282)||(35252210-35252268)
chr2 (232-282)||(38239639-38239689)
chr2 (196-273)||(7936922-7936999)
chr2 (238-282)||(31740047-31740092)
chr2 (217-282)||(35755590-35755655)
chr2 (232-273)||(41033047-41033088)
chr2 (222-282)||(3423856-3423916)
chr2 (230-282)||(5903231-5903283)
chr2 (222-282)||(9478221-9478281)
chr2 (230-282)||(13630369-13630421)
chr2 (230-282)||(15171180-15171232)
chr2 (231-279)||(29629080-29629128)
chr2 (195-279)||(29729820-29729904)
chr2 (223-300)||(37053517-37053596)
[»] chr8 (40 HSPs)
chr8 (196-282)||(40356767-40356853)
chr8 (222-282)||(14482124-14482184)
chr8 (224-282)||(29699178-29699236)
chr8 (198-293)||(11494049-11494148)
chr8 (202-279)||(42597303-42597380)
chr8 (222-282)||(40728506-40728566)
chr8 (230-277)||(11188248-11188295)
chr8 (224-282)||(34563174-34563232)
chr8 (208-274)||(38874554-38874620)
chr8 (221-279)||(40280296-40280354)
chr8 (196-282)||(41620379-41620465)
chr8 (231-272)||(1561210-1561251)
chr8 (190-250)||(2093160-2093220)
chr8 (231-279)||(26215427-26215475)
chr8 (222-282)||(28769427-28769487)
chr8 (222-282)||(39392749-39392809)
chr8 (232-283)||(8194025-8194076)
chr8 (224-282)||(12361115-12361174)
chr8 (223-277)||(26813897-26813952)
chr8 (243-282)||(26820142-26820181)
chr8 (232-282)||(12224987-12225037)
chr8 (224-278)||(35298570-35298624)
chr8 (224-282)||(35534949-35535007)
chr8 (231-272)||(9928187-9928228)
chr8 (231-276)||(10114421-10114466)
chr8 (237-282)||(11119087-11119132)
chr8 (238-279)||(16163369-16163410)
chr8 (217-282)||(27320233-27320297)
chr8 (221-274)||(31884515-31884568)
chr8 (231-276)||(32506988-32507033)
chr8 (221-282)||(34788515-34788576)
chr8 (221-282)||(38561647-38561708)
chr8 (222-282)||(8799327-8799387)
chr8 (217-277)||(11813198-11813258)
chr8 (216-248)||(14247354-14247386)
chr8 (223-279)||(18356242-18356298)
chr8 (195-282)||(26717152-26717237)
chr8 (194-242)||(31296001-31296049)
chr8 (231-279)||(37444506-37444554)
chr8 (196-279)||(42568711-42568792)
[»] scaffold0590 (1 HSPs)
scaffold0590 (225-282)||(1162-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (225-282)||(2756-2813)
[»] scaffold0024 (2 HSPs)
scaffold0024 (223-282)||(27499-27558)
scaffold0024 (195-277)||(23806-23888)
[»] scaffold0549 (2 HSPs)
scaffold0549 (196-285)||(1809-1897)
scaffold0549 (196-285)||(3899-3987)
[»] scaffold0508 (1 HSPs)
scaffold0508 (217-282)||(9863-9928)
[»] scaffold0654 (1 HSPs)
scaffold0654 (196-282)||(6725-6812)
[»] scaffold0100 (1 HSPs)
scaffold0100 (224-275)||(42541-42592)
[»] scaffold0014 (1 HSPs)
scaffold0014 (196-282)||(116644-116731)
[»] scaffold0349 (1 HSPs)
scaffold0349 (217-278)||(5744-5806)
[»] scaffold0053 (1 HSPs)
scaffold0053 (232-282)||(20111-20161)


Alignment Details
Target: chr3 (Bit Score: 295; Significance: 1e-166; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 9 - 315
Target Start/End: Original strand, 41158818 - 41159124
Alignment:
Q  9 acatcatctctagcttctctaattttttctcagaatcttacagaatgaaatatcagttttctgcaatcacataaccagaattattttttcagcatgtcca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41158818 acatcatctctagcttctctaattttttctcagaatcttacagaatgaaatatcagttttctgcaatcacataaccagaattattttttcagcatgtcca 41158917  T
Q  109 actcttaaccacaagtcatatggtgcacttacaatgatatgttttgtgtagtgtctcaaatgtcacaactcaatctaacttaggtactgtttggataacc 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  41158918 actcttaaccacaagtcatgtggtgcacttacaatgatatgttttgtgtagtgtctcccatgtcacaactcaatctaacttaggtactgtttggataacc 41159017  T
Q  209 aacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttttcatattagttatcatgatga 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41159018 aacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttttcatattagttatcatgatga 41159117  T
Q  309 gtttatg 315  Q
    |||||||    
T  41159118 gtttatg 41159124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 149 - 282
Target Start/End: Original strand, 41155045 - 41155178
Alignment:
Q  149 gttttgtgtagtgtctcaaatgtcacaactcaatctaacttaggtactgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataa 248  Q
    |||| ||||||||||||| |  |||||||||||||||||||||||||| ||||||||| || ||||||||  ||||||  |||||| | ||||||| |||    
T  41155045 gtttggtgtagtgtctcacaaatcacaactcaatctaacttaggtactatttggataaacagcttaattaggcgcttactgtataaattcttatgtgtaa 41155144  T
Q  249 gttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| |||||||  ||||| ||||||||||||    
T  41155145 gttatttctataacacaagattaaataaagtcaa 41155178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 41029005 - 41028938
Alignment:
Q  216 ttaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaat 283  Q
    ||||| ||||||| |||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||    
T  41029005 ttaaatgcttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaat 41028938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 4534531 - 4534445
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataact-aaagataaaataaagtc 280  Q
    |||||||||||| |||||||||||| | ||||| ||||||||||||| ||||||||||||  ||||| | ||||||| |||||||||    
T  4534531 ctgtttggataaacaacttaattaagcacttatagtataagtgcttacgtataagttatttatataaataaaagatataataaagtc 4534445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 37138236 - 37138300
Alignment:
Q  190 aggtactgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttatt 254  Q
    ||||||||||||||||| ||||||||||  | |||||| | ||||||||||||||||||||||||    
T  37138236 aggtactgtttggataaacaacttaatttgaagcttatagcataagtgcttatgtataagttatt 37138300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 25964332 - 25964419
Alignment:
Q  190 aggtactgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||| ||||| |||||| ||||||||||||  ||||||| ||||||| ||| |||||||| ||||  |||||| ||||||||||||||    
T  25964332 aggttctgttgggataaacaacttaattaagtgcttatcatataagttcttttgtataagctatttttataacaaaagataaaataaa 25964419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 1395567 - 1395653
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| || |||  |||| ||||||| | | |||||| |||||||||| |||| ||||||| |||||||||||||||||||    
T  1395567 tgtttggataatcaccttgcttaagcgcttatagcaaaagtgcatatgtataagctatttctataacaaaagataaaataaagtcaa 1395653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 48528473 - 48528555
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||||||| ||||| ||||||  ||||||| ||||||| |||||||||||| |||| ||||||| | | ||||||||||    
T  48528473 ctgtttggataaacaactgaattaagagcttatcatataagtacttatgtataagctatttctataacaagaaataaaataaa 48528555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 16790234 - 16790181
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  16790234 ttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 48588560 - 48588645
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtc 280  Q
    ||||||| |||| |||||||||||| | |||||| |||||| |||||  ||||||||||| ||||||  ||| |||||||||||||    
T  48588560 ctgtttgaataaacaacttaattaagctcttatcatataagagcttacatataagttatttctataataaaatataaaataaagtc 48588645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 905115 - 905055
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattt 285  Q
    |||| |||||| ||||| ||||||| |||| ||||||| ||||||||||||||||||||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaattt 905055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 22214828 - 22214772
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||    
T  22214828 cttatcgtataagtgcgtatgtataaattatttctataacaaaggataaaataaagt 22214772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 25185891 - 25185974
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||| ||||||||||||  | ||||| |||||||||||||| ||||| ||||  |||||| |||||| ||||||||||||    
T  25185891 tttggataaacaacttaattaagtgtttatcatataagtgcttatgaataagatatttatataacaaaagat-aaataaagtcaa 25185974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 44374792 - 44374732
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||||||||||||||| |||  || |||| |||||||||||||||||||    
T  44374792 gcttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaa 44374732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 24158677 - 24158610
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataac 262  Q
    |||||||||||| || |||||||||   ||| || ||||||||||||||||||||||||| |||||||    
T  24158677 ctgtttggataaacaccttaattaagttcttgtcatataagtgcttatgtataagttatttctataac 24158610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 24625429 - 24625378
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataag 249  Q
    ||||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  24625429 tttggataagcaacttaattaagcgcttatagcataagtgcttatgtataag 24625378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 39971242 - 39971297
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    |||||| ||||||||||||||||||||||| |  |||||| |||||||||||||||    
T  39971242 cttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaag 39971297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 20174028 - 20173982
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  20174028 tataagtgcttatgtattagttatttctataacaaaagataaaataa 20173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 20192744 - 20192694
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaa 20192694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 24235857 - 24235771
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| ||||||||||||  | ||||   |||||  ||| ||||||||||||| ||||||| |||||||| ||||||||||    
T  24235857 tgtttggataaacaacttaattaagtgtttataacataagcacttgtgtataagttatttctataacaaaagataatataaagtcaa 24235771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 24605154 - 24605104
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| |||||||||||||||| ||||||| |||||| ||||||||||||    
T  24605154 taagtgtttatgtataagttatttctataacaaaagatgaaataaagtcaa 24605104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 40122898 - 40122840
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||| ||| |||||||||||| |||| | ||||| |||||||||||||||||||    
T  40122898 ttatcgtatcagtacttatgtataagctatttcaataacaaaagataaaataaagtcaa 40122840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 54775052 - 54775110
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| || ||||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  54775052 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaa 54775110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 38462198 - 38462263
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||| |||||||| |||| |||||| |||| ||||| | |||||||||||||||||||    
T  38462198 taaacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaa 38462263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 28283739 - 28283675
Alignment:
Q  208 caacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaa 272  Q
    ||||| |||||| || ||||| |||||||||||||| |||||||| | ||||||| |||||||||    
T  28283739 caactcaattaagcgtttatcatataagtgcttatgcataagttacttctataacaaaagataaa 28283675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 32064338 - 32064422
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||  || |||||| |||| |||||| ||| |||||| ||||||||||| || ||| ||| ||| |||||||||||||||    
T  32064338 tttggatagacatcttaatgaaacacttatcatattagtgctaatgtataagttctttctaaaacaaaaaataaaataaagtcaa 32064422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 5430921 - 5430988
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataac 262  Q
    |||||||||||| ||||||||||||  ||||||   |||||||||||||||||||  ||| |||||||    
T  5430921 ctgtttggataagcaacttaattaagagcttatatcataagtgcttatgtataagccatttctataac 5430988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 48365010 - 48364967
Alignment:
Q  239 ttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||| | ||||| |||||||||||||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaa 48364967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 16790502 - 16790444
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||||||||||||||||| ||||  |||||| | |||||||||||| ||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaa 16790444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 25129766 - 25129812
Alignment:
Q  236 tgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||| ||||||||||| | ||||||| |||||||||||    
T  25129766 tgcttatgtataacttattcctataccaaaagatacaataaagtcaa 25129812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 27792796 - 27792854
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||||||||||||||||| |||| | | ||| ||||||||||||| |||||    
T  27792796 ttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaa 27792854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 34318009 - 34318075
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttt 287  Q
    ||||||| |||| |||||| | ||||||| |||| ||||||| ||| ||||||||||||||| ||||    
T  34318009 cgcttatggtatcagtgctcaagtataagctatttctataacaaaatataaaataaagtcaaatttt 34318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 36193692 - 36193607
Alignment:
Q  194 actgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtc 280  Q
    ||||||||||||| ||||||| ||||   |||||| |||| ||| ||||||||||| |||| ||||||| || |||||||| |||||    
T  36193692 actgtttggataaacaacttatttaagtacttatcatatatgtgtttatgtataaggtatt-ctataacaaacgataaaatgaagtc 36193607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 44488780 - 44488846
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataac 262  Q
    |||||||||||| |  |||||||| ||||||| ||||| ||| ||||||||||| |||| |||||||    
T  44488780 tgtttggataactagtttaattaagcgcttattgtataggtgtttatgtataagctatttctataac 44488846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 49546625 - 49546575
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||| |||| ||||  |||||| |||||||||||||||||||    
T  49546625 taagtgcttatgtgtaagatatttttataacaaaagataaaataaagtcaa 49546575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 2128399 - 2128342
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||| | ||||| | ||||||||||| |||| ||||||| ||||||||||||||||    
T  2128399 gcttatagcataagcgtttatgtataagctatttctataacaaaagataaaataaagt 2128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 2825085 - 2825134
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||||||| ||||| ||||  ||||| ||||||||||||||||    
T  2825085 tataagtgcttatgtttaagtgattctgataacaaaagataaaataaagt 2825134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 3016001 - 3015937
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||  ||||||||||||||||| | ||||| ||||||| ||||||||||| |||||||    
T  3016001 taaacacttattatataagtgcttatgtattaattatttctataac-aaagataaaatgaagtcaa 3015937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 35708231 - 35708300
Alignment:
Q  212 ttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    |||| ||| |||||||| | |||||||||||| ||| | |||| |||||||||||||| ||| |||||||    
T  35708231 ttaaataagcgcttatcatctaagtgcttatgcatatgctatttctataactaaagatgaaacaaagtca 35708300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 42039091 - 42039140
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    |||||||||||||||||| |||| || |||| ||| ||||||||||||||    
T  42039091 taagtgcttatgtataagctatttctgtaacaaaaaataaaataaagtca 42039140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 44014218 - 44014259
Alignment:
Q  238 cttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||||||| |||| |||||||||||||||||| |||||    
T  44014218 cttatgtataagctatttctataactaaagataaaacaaagt 44014259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 53736250 - 53736201
Alignment:
Q  233 aagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||| |||| ||||||| ||||||| ||||||||||||| |||||    
T  53736250 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaa 53736201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 3182510 - 3182450
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| | |||||| |||||||||||||| | |||||   |||||||||||||||||||    
T  3182510 gcttatcatttaagtgtttatgtataagttacttctatagaaaaagataaaataaagtcaa 3182450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 12923465 - 12923413
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| |||||||| |||| || |||  |||||||||||||||||||    
T  12923465 tataagtgcttgtgtataagctattgctgtaataaaagataaaataaagtcaa 12923413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 27294279 - 27294331
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaata 275  Q
    |||| |||||||||||||||| |||||||  | ||||||| ||||||||||||    
T  27294279 cttaacgtataagtgcttatgcataagtttcttctataacaaaagataaaata 27294331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 33434146 - 33434095
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||||||| ||||   ||||| |||||||||||||||||||    
T  33434146 tataagtgcttatgtataagatattta-ataacaaaagataaaataaagtcaa 33434095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 49587055 - 49587004
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||  |||||| |||| ||||||| |||||||||||||||||||    
T  49587055 tataagtgcttac-tataagctatttctataacaaaagataaaataaagtcaa 49587004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 50760543 - 50760591
Alignment:
Q  229 gtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||||||||||||| ||||| |||| |||| ||| |||||||||||||    
T  50760543 gtataagtgcttatgaataagctatttctatgactcaagataaaataaa 50760591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 52450228 - 52450140
Alignment:
Q  194 actgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||| || |||||| ||  | ||||| || |||| |||||| |||||  ||| ||||||| |||||| ||||||||||||    
T  52450228 actgtttggataaacagcttaatcaagtgtttatcatacaagtacttatgcataagcaatttctataacaaaagatgaaataaagtcaa 52450140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 19422314 - 19422400
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| || ||||||||| |||||||| ||||| ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  19422314 tgtttggataaacagcttaattaagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaa 19422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 21593187 - 21593099
Alignment:
Q  194 actgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||| ||||| |||||   |||||| |  |||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  21593187 actgtttggataagcaactgaattaggtgcttatagcgtaagtgcttatgtataaactatttctataactaaagataaaataaagtcaa 21593099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 198 - 283
Target Start/End: Complemental strand, 969517 - 969432
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaat 283  Q
    ||||||||| ||||||||| || |||||||| ||||||||||||| ||||||  ||| ||||||  |||| |||||||||||||||    
T  969517 tttggataaacaacttaatcaagcgcttatcatataagtgcttatctataagcaatttctataataaaaggtaaaataaagtcaat 969432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 24160662 - 24160583
Alignment:
Q  203 ataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||||||||||||||||||| |||||||||||||  ||||| | || ||||||| |||||||| ||||| ||||    
T  24160662 ataaacaacttaattaaacgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaa 24160583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 39178431 - 39178341
Alignment:
Q  190 aggtactgtttggataaccaacttaattaaacgcttatcgtataagtgcttat-gtataagttattcctataactaaagataaaataaagt 279  Q
    |||| |||||||||||| ||||||| || |  |||||| ||||||||||||||  |||||| |||| |||||||| |||||||||||||||    
T  39178431 aggtcctgtttggataaacaacttattttacagcttatagtataagtgcttatcatataagctatttctataactcaagataaaataaagt 39178341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 30079561 - 30079468
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttttt 288  Q
    |||||||||||| ||||||||||||   |||||| | |||||||||| ||||||| ||||  |||  | |||| ||||||||||||||||||||    
T  30079561 ctgtttggataaacaacttaattaagtccttatcatgtaagtgcttaagtataagctatttatatctcaaaaggtaaaataaagtcaatttttt 30079468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 51556013 - 51555956
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    ||||| |||||||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 30207731 - 30207663
Alignment:
Q  209 aacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||||||||| | |||||| |||||||||||||||||| |||| | ||||||| ||| ||||||||||    
T  30207731 aacttaattaagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa 30207663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 47970248 - 47970300
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||    
T  47970248 tataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaa 47970300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 4191663 - 4191722
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagat-aaaataaagtcaa 282  Q
    ||||| |||||||||||||||||||| |||| ||||||| |||||| |||||||||||||    
T  4191663 ttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaa 4191722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 30024624 - 30024679
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||| ||||||| |||||| |||||||||| ||||||| ||||||||||||||||    
T  30024624 ttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagt 30024679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 4663842 - 4663804
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataac 262  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  4663842 ttatcgtataagtgcttatgtataagttatttctataac 4663804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 9319356 - 9319282
Alignment:
Q  209 aacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaat 283  Q
    ||||||||||| || ||||| ||||| || || ||||||||| ||| ||||||| ||||||| ||||||||||||    
T  9319356 aacttaattaatcgtttatcatataaatgtttctgtataagtaatttctataacaaaagatagaataaagtcaat 9319282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 9843841 - 9843775
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataa 261  Q
    |||||||||||| |||||||| |||  ||||||| ||||| |||||||||||||| |||| ||||||    
T  9843841 ctgtttggataaacaacttaaataagtgcttatcatataactgcttatgtataagctatttctataa 9843775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 25487704 - 25487634
Alignment:
Q  211 cttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    ||||||||| | |||||| | ||| |||||||||||||| |||| ||||||| ||| ||||||||||||||    
T  25487704 cttaattaagcacttatcctttaaatgcttatgtataagctatttctataacaaaaaataaaataaagtca 25487634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 28623219 - 28623265
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||    
T  28623219 tataagtgcttatgtataagttatttatataacaaaagataaaataa 28623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 51044597 - 51044547
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| ||||||||||| |||| ||||||| |||||||||||||||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaa 51044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 27671977 - 27671920
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||||||||| ||||||||||||| | | ||| |||||||||||||||||||    
T  27671977 tatcttataagtgcttgtgtataagttatttccacaacaaaagataaaataaagtcaa 27671920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 49219060 - 49219121
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| ||| |||| ||| |||||||||||| ||||||| ||| |||||||||||||||    
T  49219060 cgcttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaa 49219121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 51098212 - 51098297
Alignment:
Q  197 gtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||| |||||||||||||||||| || | || ||  ||||||||||| ||||||||| |  ||||||||||||| |||||    
T  51098212 gtttgcataaacaacttaattaaacgcttctcatgtaggtatttatgtataagatattcctattataaaagataaaataacgtcaa 51098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 4798697 - 4798649
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtc 280  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||||||    
T  4798697 taagtgcttatgtataagctatttctatatcaaaagataaaataaagtc 4798649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 8422982 - 8422914
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttttcatat 293  Q
    |||| |||| ||||||||||||||| ||||  |||||  |||||||||||||||||| | |||||||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtcattgttttcatat 8422914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 11802460 - 11802523
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttttc 289  Q
    |||| ||||||||  |||||||||| ||||| |||||| ||||||||||||||||||| ||||||    
T  11802460 tatcctataagtggatatgtataagctattc-tataacaaaagataaaataaagtcaaatttttc 11802523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 32066558 - 32066502
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||||||||||||||||||||||||||  || |  |||||| ||||||||||||||    
T  32066558 cgcttatcgtataagtgcttatgtataaactacttttataacaaaagataaaataaa 32066502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 14011129 - 14011212
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    |||||||||||| ||||||||||||  | ||||| ||||| || || |||||||| || |  |||||| |||||||||||||||    
T  14011129 ctgtttggataaacaacttaattaagtgtttatcatataaatgattgtgtataagctagttttataacaaaagataaaataaag 14011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 30743289 - 30743347
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||| ||||||||||| || ||||||  |||||| |||||||||||||||||||    
T  30743289 cttatcgtattagtgcttatgtgtaggttattt-tataacaaaagataaaataaagtcaa 30743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 54325184 - 54325125
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| ||||||||||| |||||||  |||| |||| || |||||||||||||||||||    
T  54325184 cttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaa 54325125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 7029319 - 7029405
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| ||| |||||||||| ||| || ||||| ||||||  | |||| |||| ||||||  |||||||||||| ||||||    
T  7029319 tgtttggataaacaaattaattaaactcttctcatataactgcttaattgtaagctatttctataagaaaagataaaatagagtcaa 7029405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 15511483 - 15511425
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataacta-aagataaaataaagt 279  Q
    ||||||| | |||||||||||||||||||||||  |||||| | |||||||||||||||    
T  15511483 gcttatcatgtaagtgcttatgtataagttatttttataacaagaagataaaataaagt 15511425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 23815266 - 23815352
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| |||||| ||||   | |||| | |||| |||| |||| ||||||||| ||||||| ||||||||||||| |||||    
T  23815266 tgtttggataaacaacttcattatcagtttatagcataaatgctaatgtttaagttatttctataacaaaagataaaataatgtcaa 23815352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 24936240 - 24936286
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    |||||||| |||||||||||||||| ||||||| ||| |||||||||    
T  24936240 tataagtggttatgtataagttatttctataacaaaatataaaataa 24936286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 25717434 - 25717480
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    ||||||||||||||||||||||| ||| ||  |||||||||||||||    
T  25717434 taagtgcttatgtataagttatttctagaatgaaagataaaataaag 25717480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 36734817 - 36734875
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||||||||||||||||  | || ||||||| |||| ||||||||||||||    
T  36734817 ttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaa 36734875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 6364087 - 6364128
Alignment:
Q  238 cttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||||||| |||| ||||||| ||||||||||||||||    
T  6364087 cttatgtataagctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 22684665 - 22684604
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| ||||| ||||| |||||||| |||| ||||||| || | ||||||||||||||    
T  22684665 cgcttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaa 22684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 24193502 - 24193539
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttatt 254  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  24193502 taaacgcttatcatataagtacttatgtataagttatt 24193539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 27321990 - 27321941
Alignment:
Q  211 cttaattaaacgcttatcgtataagtgcttatgtataagttattcctata 260  Q
    |||||||||  ||||||| |||||||| |||||||||||||||| |||||    
T  27321990 cttaattaagggcttatcatataagtgtttatgtataagttatttctata 27321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 35743225 - 35743282
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    |||||||| |||| ||| | ||||| |||||||| ||||||| |||||||||||||||    
T  35743225 cgcttatcatatatgtgttgatgtacaagttatttctataacaaaagataaaataaag 35743282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 37733896 - 37733981
Alignment:
Q  197 gtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||| |||||||||||| ||||| ||  |||||| ||||| |||||| |||| ||||| | | ||||| |||||||||||    
T  37733896 gtttcgataaacaacttaattaagcgcttgtcaaataagtacttatttataagctatttctatagcaagagatacaataaagtcaa 37733981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 486002 - 486058
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||| || ||||||||||||||| | |||| ||| ||| ||||||||||||||    
T  486002 cgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaataaa 486058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 2169946 - 2170010
Alignment:
Q  218 aaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||||||| ||| |||||||||||| || || ||||||| ||| |||||||| ||||||    
T  2169946 aaactcttatcgtaaaagggcttatgtataaattgtttctataacaaaaaataaaatagagtcaa 2170010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 3662283 - 3662330
Alignment:
Q  234 agtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  3662283 agtgcttatg-ataaactattcctataacaaaagataaaataaagtcaa 3662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 7601690 - 7601738
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||| ||||||||||||| |||||||||| | || |||||||||||||    
T  7601690 ataagcgcttatgtataagctattcctatagcaaaggataaaataaagt 7601738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 8130104 - 8130156
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||| |||| |||| || ||||||| |||||||| ||||||||||    
T  8130104 tataagtgcttacgtatgagttctttctataacaaaagataacataaagtcaa 8130156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 11389457 - 11389505
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||||||||||||| ||||| ||||||  ||||||||| ||||||    
T  11389457 ataagtgcttatgtataaattatttctataaaaaaagataaagtaaagt 11389505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 32724037 - 32724101
Alignment:
Q  218 aaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| || ||| ||||||||||| |||  |||| |||| || |||||||||||||||||||    
T  32724037 aaacgcttctcatatcagtgcttatgtctaatctatttctattacaaaagataaaataaagtcaa 32724101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 42322051 - 42321967
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||| ||||||| | |  ||||||| | ||||||| ||||| ||||| ||||  |||||| || ||||||||||||||||    
T  42322051 tttggataaacaacttagtgaggcgcttatagcataagtgtttatgaataagctatttttataacaaatgataaaataaagtcaa 42321967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 44119293 - 44119249
Alignment:
Q  239 ttatgtataagttattcctataactaaagataaaataaagtcaat 283  Q
    |||||||||||||||| ||||| | |||||||||| |||||||||    
T  44119293 ttatgtataagttatttctatagcaaaagataaaacaaagtcaat 44119249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 282
Target Start/End: Complemental strand, 4202302 - 4202217
Alignment:
Q  197 gtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||| |||||||||||| || ||||| |||||||||||| |||||||||||| ||||||| |||||||||  ||||||||    
T  4202302 gtttggataagcaacttaattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaa 4202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 41638485 - 41638399
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    |||||||||||| |||||| ||||| | |||||| ||||||||||||||||||| |||||  || |||  |||||||||||||||||    
T  41638485 ctgtttggataaacaacttgattaagcacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtca 41638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 870961 - 871033
Alignment:
Q  216 ttaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttttt 288  Q
    |||| |||||||| |||||||||||||||||||  ||||  |||||| ||||||||||| |||||||||||||    
T  870961 ttaagcgcttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaatttttt 871033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 29046087 - 29046011
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaa 272  Q
    ||||||||||| ||  |||||||| | |||||||||||||||||| |||||||| |||| ||||||| |||||||||    
T  29046087 tgtttggataaacagattaattaagcacttatcgtataagtgcttgtgtataagatatttctataacaaaagataaa 29046011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 172264 - 172318
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||||| | |||||||||||||| |||| ||||||||||||||||||||||    
T  172264 cttatcgtattattgcttatgtataagctatttctataactaaagataaaataaa 172318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 279
Target Start/End: Original strand, 52286576 - 52286657
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||| | |||||||| | |||||||| |||||| ||||||| ||||| |||| ||| ||| ||||||||||||||||    
T  52286576 tttggataaaccacttaatttagcgcttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagt 52286657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 49557064 - 49557120
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||| ||||||||||  ||||||||||||| ||||||| ||||||||||||||||    
T  49557064 cttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagt 49557120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 2233296 - 2233391
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtc-aattttttcata 292  Q
    ||||||||| | ||||| | || ||||||||||||||||||||||||||||||| || ||||    ||||||||||||| ||| ||| ||||||||    
T  2233296 tttggataaacgacttattcaagcgcttatcgtataagtgcttatgtataagttctttctatggtaaaagataaaataacgtctaatgttttcata 2233391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 15360827 - 15360876
Alignment:
Q  233 aagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||||| ||||||| ||||||| |||||||||||||||||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaa 15360876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 16982084 - 16982027
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||| |||||||| |||||||||| ||||| | ||||| ||||||||||||||||    
T  16982084 gcttatcatataagtgtttatgtataacttatttcgataacaaaagataaaataaagt 16982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 36641800 - 36641857
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||| | ||||| ||||||||||| ||||||| |||||||||||||||||||    
T  36641800 tatcatataattacttatatataagttatttctataacaaaagataaaataaagtcaa 36641857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 42336579 - 42336644
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| ||| ||| |||||||||||||| ||||||  |||||| ||| |||||||||||||||    
T  42336579 taaacgctcatcatattagtgcttatgtataggttatttttataacaaaaaataaaataaagtcaa 42336644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 7274087 - 7274027
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| ||||| |||||||||||| ||||||  |||||| |||||| ||||||||||||    
T  7274087 gcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaa 7274027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 17269180 - 17269232
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||||||||||||||| ||| ||| ||||  |||||||||||||    
T  17269180 tataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaa 17269232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 26179389 - 26179441
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataa 248  Q
    ||||||||||||||| |||| || ||||||||  |||||||||||||||||||    
T  26179389 tgtttggataaccaaattaactacacgcttataatataagtgcttatgtataa 26179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 30815810 - 30815726
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgc-ttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||| | |||||||||||| |||||||| ||||| | | |||||| |||| | || ||||||| ||||||||||||||||    
T  30815810 tgtttggatcaacaacttaattaagcgcttatcatataattactttatgtctaagctttttctataacaaaagataaaataaagt 30815726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 46499994 - 46499942
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||| |||||| |||| ||||||  |||||||||||||||||||    
T  46499994 tataagtgcttatctataagctatttctataagaaaagataaaataaagtcaa 46499942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 49517012 - 49517052
Alignment:
Q  242 tgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaa 49517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 50319230 - 50319274
Alignment:
Q  238 cttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 1224512 - 1224582
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttttcatattag 296  Q
    ||||||| |||||||||| ||||||||||| ||||||    |||||||| ||||||||| ||||||||||||    
T  1224512 tatcgtaaaagtgcttatatataagttatttctataataggagataaaa-aaagtcaatattttcatattag 1224582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 4200152 - 4200211
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| | |||||| |||| |||||||||||  |||||| |||||||||||||||||||    
T  4200152 cttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaa 4200211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 23895259 - 23895318
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| |||||||  ||||||||||| |||| ||||||| |||||||||||||| ||||    
T  23895259 cttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaa 23895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 37818395 - 37818446
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||||||||||| ||||||| | ||||||||  |||||||    
T  37818395 ataagtgcttatgtataagttatttctataacaagagataaaacgaagtcaa 37818446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 42397674 - 42397741
Alignment:
Q  211 cttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    ||||||||| || ||| | |||||||||||||||||||| |||| || |||| ||| |||||||||||    
T  42397674 cttaattaagcgtttaacttataagtgcttatgtataagctatttctgtaacaaaacataaaataaag 42397741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 48830207 - 48830164
Alignment:
Q  239 ttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||| |||| || |||||||||||||||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaa 48830164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 3052821 - 3052771
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| |||||||| |||| |||| |||||||||||||||||||||| ||||    
T  3052821 taagcgcttatgtgtaagctatttctataactaaagataaaataaaatcaa 3052771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 4768961 - 4768915
Alignment:
Q  233 aagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||||||||| |||| ||||| | ||||||||||||||||    
T  4768961 aagtgcttatgtataagctattgctataccaaaagataaaataaagt 4768915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 13037794 - 13037836
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaa 272  Q
    |||||||||||||||||||| |||| ||||||| |||||||||    
T  13037794 tataagtgcttatgtataagctatttctataacaaaagataaa 13037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 33339605 - 33339511
Alignment:
Q  185 aacttaggtactgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||| | ||||||  ||||| ||||||||||||  | ||||| |||| ||| ||||||||||| |||| ||||| | ||||||||||| ||||    
T  33339605 aacttatgcactgttgagataaacaacttaattaagtggttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagt 33339511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 45769882 - 45769836
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||||||||| ||| ||||| ||||||| ||||||||||||||    
T  45769882 ataagtgcttatgtgtaaattatttctataacaaaagataaaataaa 45769836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 48282054 - 48282116
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctat-aactaaagataaaataaagtcaa 282  Q
    |||||||| |||||||||||||||| ||| |||| |||| ||  |||||||||||||||||||    
T  48282054 cgcttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaa 48282116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 1730825 - 1730874
Alignment:
Q  233 aagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||||||| ||||  | |||| |||||||||||||||||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaa 1730874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 15579415 - 15579460
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||||||||||||| |||| |||||||||||| | |||||||    
T  15579415 taagtgcttatgtataagctatttctataactaaagttcaaataaa 15579460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 16980749 - 16980814
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttttt 288  Q
    |||||| ||||||||||||||||||||| ||| ||| ||  || | ||||||||| ||||||||||    
T  16980749 cttatcatataagtgcttatgtataagtcatttctacaaaaaatggtaaaataaaatcaatttttt 16980814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 23373438 - 23373377
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaat 283  Q
    ||||||| ||||| |||||| |||| || |||| ||||| | ||||||||||||||||||||    
T  23373438 gcttatcatataactgcttacgtattagctatttctatatcaaaagataaaataaagtcaat 23373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 34619553 - 34619472
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    |||||||||||| || |||||||    |||||| | |||| ||||||||||||||  ||| ||||||| |||||||||||||    
T  34619553 ctgtttggataaacagcttaatttgcagcttatagcataattgcttatgtataagccatttctataacaaaagataaaataa 34619472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 1201356 - 1201316
Alignment:
Q  233 aagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    |||||||||||||||||||||| ||||||| |||| |||||    
T  1201356 aagtgcttatgtataagttattactataacaaaaggtaaaa 1201316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 4549797 - 4549845
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||| |||||||||| ||| |||| ||||||| ||||||||||||||||    
T  4549797 ataaatgcttatgtacaagctatttctataacaaaagataaaataaagt 4549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 14737829 - 14737793
Alignment:
Q  246 taagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaa 14737793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 282
Target Start/End: Complemental strand, 17423109 - 17423026
Alignment:
Q  197 gtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaa-gataaaataaagtcaa 282  Q
    |||||||||| |||| ||||||| |||||||  |||||||   |||||||||| | || ||||||| ||| ||||||||||||||||    
T  17423109 gtttggataaacaacataattaagcgcttataatataagt---tatgtataagctttttctataacaaaacgataaaataaagtcaa 17423026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 21516253 - 21516285
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttat 227  Q
    |||||||||||| ||||||||||||||||||||    
T  21516253 ctgtttggataaacaacttaattaaacgcttat 21516285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 27140417 - 27140461
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    |||||| |||||| ||||||||| ||||||| |||||||||||||    
T  27140417 taagtgtttatgtgtaagttatttctataacaaaagataaaataa 27140461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 29665936 - 29665884
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataa 248  Q
    ||||||||||| || ||||||||||| ||||| | ||||| ||||||||||||    
T  29665936 tgtttggataaacagcttaattaaacacttatagcataagcgcttatgtataa 29665884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 37841929 - 37841977
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||| || ||||||||| |||||||||||| || |||||||||||||    
T  37841929 ataagtactcatgtataagctattcctataacaaatgataaaataaagt 37841977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 38651547 - 38651499
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtc 280  Q
    |||||||||||||||||| || | ||||||| ||||||||| |||||||    
T  38651547 taagtgcttatgtataagctaattctataacaaaagataaactaaagtc 38651499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 39348513 - 39348481
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttat 227  Q
    |||||||||||| ||||||||||||||||||||    
T  39348513 ctgtttggataagcaacttaattaaacgcttat 39348481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 40499848 - 40499764
Alignment:
Q  197 gtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||| || |||||| | ||||||    
T  40499848 gtttggataaacaacttaattaaaagcttatcatataagtgcttatgtacaagttatttctataacaaatgataaagtcaagtca 40499764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 11095643 - 11095551
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttttt 288  Q
    ||||||||||| |||||||| ||||| |||| | |||||||| ||||||||||  |||| ||||||| || |||| |||||||||||| ||||    
T  11095643 tgtttggataaacaacttaactaaacacttaccatataagtgattatgtataaactatttctataacaaatgatacaataaagtcaatgtttt 11095551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 20982283 - 20982223
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||||||||||||||| |||| ||||||| || ||||||||||||||||    
T  20982283 gcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 29117089 - 29117018
Alignment:
Q  211 cttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||| |||||||| ||||  || ||||||||| |||||| ||||||| |||||||||||||||||||    
T  29117089 cttaattaagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaataaagtcaa 29117018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 27106076 - 27106014
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||| ||||| ||||||||||||| |||||||| ||| ||||||| ||||||||||||||||    
T  27106076 taaacacttattgtataagtgcttacgtataagtcatttctataacaaaagataaaataaagt 27106014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 7096264 - 7096215
Alignment:
Q  233 aagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  7096264 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 7096215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 35095940 - 35095871
Alignment:
Q  213 taattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||| ||||||||||||| | |||  |||| ||||||| |||||||||||||||||||    
T  35095940 taattaagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaa 35095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 26516219 - 26516275
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||| |||||||||||||||||||| |||| ||| ||| ||||||||||||||    
T  26516219 cgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 35135802 - 35135750
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||    
T  35135802 tataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaa 35135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 40048419 - 40048371
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  40048419 ataagtgcttatgtataagttgtttctataacaaaagataaaataaagt 40048371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 4855594 - 4855677
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||| |||||||||||||  ||||| | |||||| ||||||||| || ||||  |||||| ||| ||||||||||||    
T  4855594 tgtttggataaacaacttaattaaatacttatagcataagtacttatgtattagctatttttataacaaaaaataaaataaagt 4855677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 6739796 - 6739854
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||| | |||||||||||| ||| |||||| ||||||||||||||||||||    
T  6739796 ttatcatataagcgtttatgtataagtcatttctataaataaagataaaataaagtcaa 6739854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 13224353 - 13224406
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||| || ||||||||||||||||| |||| ||||||| ||||||||||||||    
T  13224353 ttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 37063227 - 37063162
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| |||| || ||||| |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  37063227 taaatgcttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaa 37063162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 18704175 - 18704124
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||    
T  18704175 tataagttcttatgtataagttatttctataacaaaagat-aaataaagtcaa 18704124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 33459074 - 33459026
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||| ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  33459074 ataaatgcttatgtataagttatttctataacaaaagacaaaataaagt 33459026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 39128569 - 39128621
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||||||||||||| || | ||||||| |||||||||||||||||||    
T  39128569 tatatgtgcttatgtataagctaattctataacaaaagataaaataaagtcaa 39128621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 10391270 - 10391329
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    ||||| |||||| |||||||||||| ||||||| ||||  |||||| |||||||||||||    
T  10391270 taaacacttatcatataagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 14714992 - 14714937
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaa 272  Q
    ||||||||| ||||||||||| ||||||||||| |||| ||||||| ||| |||||    
T  14714992 taaacgcttctcgtataagtgattatgtataagctatttctataacaaaacataaa 14714937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 34198333 - 34198380
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgta 245  Q
    ||||||||| |||||||||||| | |||||| ||||||||||||||||    
T  34198333 tttggataatcaacttaattaagcacttatcatataagtgcttatgta 34198380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 36638644 - 36638719
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    ||||||||| |||||||||||| | |||||| |||| ||| | ||||||||  |||| ||||||| ||||||||||    
T  36638644 tttggataaacaacttaattaagcacttatcatataggtgttaatgtataaactatttctataacaaaagataaaa 36638719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 40097549 - 40097498
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaata 275  Q
    ||||| ||||||||| ||||||||||||||| |||||||  |||||||||||    
T  40097549 ttatcatataagtgcgtatgtataagttatttctataacagaagataaaata 40097498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 17756875 - 17756817
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||||||||||||||| |||| || || ||||  ||||||||||||||||||    
T  17756875 ttatcatataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaa 17756817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 29588810 - 29588856
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    |||||||||||||||||||| |||| ||||||| ||| |||||||||    
T  29588810 tataagtgcttatgtataagctatttctataacaaaatataaaataa 29588856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Complemental strand, 34117669 - 34117627
Alignment:
Q  234 agtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    ||||||||||||||||||||| || |||| |||||||||||||    
T  34117669 agtgcttatgtataagttatttctttaacaaaagataaaataa 34117627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 1084281 - 1084228
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataa 248  Q
    |||||||||||| ||||||||||||  | ||||| ||||||||||||| |||||    
T  1084281 ctgtttggataaacaacttaattaagtgtttatcatataagtgcttatatataa 1084228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 6738560 - 6738495
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||| ||||||| |||||||||||| |||| | ||||  ||||| |||||||||||||    
T  6738560 taaacacttatcatataagtacttatgtataagctatttcaataataaaagacaaaataaagtcaa 6738495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 19438263 - 19438198
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||||| |||||||||| |||||  |||| ||||||| |||| ||| | ||||||||    
T  19438263 taaacgcttatcgtacaagtgcttatatataaaatatttctataacaaaagctaagaaaaagtcaa 19438198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 26209546 - 26209504
Alignment:
Q  236 tgcttatgtataagttattcctataactaaagataaaataaagtc 280  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||    
T  26209546 tgcttatgtataagttatttctataac--aagataaaataaagtc 26209504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 29115359 - 29115302
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    ||||| || ||||||||||||||||| |||| ||| ||| |||| |||||||||||||    
T  29115359 ttatcataaaagtgcttatgtataagctatttctacaacaaaaggtaaaataaagtca 29115302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 34690806 - 34690855
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    ||||| |||||||||| | |||| ||||||| ||||||||||||||||||    
T  34690806 taagtccttatgtatacgctatttctataacaaaagataaaataaagtca 34690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 912797 - 912737
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||| | ||||| |||||||||| |||||||  || |||||||||||||||    
T  912797 gcttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaa 912737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 11054085 - 11054165
Alignment:
Q  199 ttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||| ||||||||||    |||||| | ||||  ||||||||||||| |||| ||||||  ||||||||||||||||    
T  11054085 ttggataaacaacttaatttccggcttatagcataaacgcttatgtataagctatttctataataaaagataaaataaagt 11054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 12407792 - 12407752
Alignment:
Q  239 ttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||| |||| ||||||| ||||||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 31208405 - 31208461
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttttt 288  Q
    |||||||||||| |||||||||| ||||||| ||| ||||| ||| ||||| |||||    
T  31208405 taagtgcttatgcataagttatttctataacaaaatataaattaacgtcaaattttt 31208461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 31694440 - 31694500
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||||||||| ||||| |||  ||||||| ||| ||||| |||||||||    
T  31694440 gcttatcatataagtgcttatgaataagctatgtctataacaaaacataaactaaagtcaa 31694500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 4006609 - 4006696
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||| |||||||||||| | ||||| | ||||||||||||| ||||| |||| ||||||| || ||||||||||||||||    
T  4006609 ctgtttggataagcaacttaattaatcccttatagcataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaa 4006696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 8470162 - 8470076
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||| ||||||||||||  |||||||||||||||||||||  ||||| |||| || |||| || || |||||||||||||    
T  8470162 tgtttagataaacaacttaattaagtgcttatcgtataagtgcttataaataagctatttctgtaacaaatgagaaaataaagtcaa 8470076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 282026 - 281936
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtat----aagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| |||| ||||||| |  | |||||||||||| ||||||||    ||| |||||||||||| |||||||||||||||||||    
T  282026 tgtttggataagcaacataattaagcaatgatcgtataagtgtttatgtatctataagctattcctataacaaaagataaaataaagtcaa 281936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 2514619 - 2514684
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||||| | |||||||||||||||||| |||| ||||||  |||||||||||||||||||    
T  2514619 taaatgcttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaa 2514684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 11340798 - 11340710
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattt 285  Q
    |||||||||||  | ||||||||| |||||| | ||||||||||||| |||||| || | ||||||| |||||||||||||||| |||||    
T  11340798 tgtttggataaagaccttaattaagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaattt 11340710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 24836339 - 24836287
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||  |||||||||||||||| ||||||| |||||||||||||||||||    
T  24836339 tataagtatttatgtataagttatttctataacaaaagataaaataaagtcaa 24836287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 28531725 - 28531629
Alignment:
Q  186 acttaggtactgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| ||||||||| ||  |  || ||||| |||||||| || |||||||  |||||||||||||  |||||| |||||||||||||||||||    
T  28531725 acttaggtcctgtttggacaaatagtttcattaagcgcttatcataaaagtgctcttgtataagttatttatataacaaaagataaaataaagtcaa 28531629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 5554936 - 5554861
Alignment:
Q  199 ttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaat 274  Q
    |||||||| ||| ||||| || ||| |||| |||| ||| |||||||||||||||| ||||||| |||||||||||    
T  5554936 ttggataaacaatttaataaagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 5554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 33068710 - 33068655
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    ||||||||  |||| ||||||||||||||||||| ||||||| |||||||||||||    
T  33068710 cgcttatcaaataaatgcttatgtataagttatttctataacaaaagataaaataa 33068655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 5328898 - 5328956
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| || ||||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  5328898 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaa 5328956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 31461601 - 31461651
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    ||||| ||||||||||||||||||||| |||| ||||||| ||||||||||    
T  31461601 cttattgtataagtgcttatgtataagctatttctataacaaaagataaaa 31461651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 31671021 - 31670959
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttt 286  Q
    ||||| ||||||||||||| ||||||| ||| ||||||| | |||||||||||| ||||||||    
T  31671021 ttatcatataagtgcttatatataagtcatttctataacaatagataaaataaattcaatttt 31670959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 507154 - 507199
Alignment:
Q  234 agtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  507154 agtgcttatgtataaattatttctataacaaaagataaaataaagt 507199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 4248879 - 4248940
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| || ||||||||||||| |||||| |||| | ||||| |||||||||||||||||||    
T  4248879 cgcttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaa 4248940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 8010259 - 8010339
Alignment:
Q  202 gataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaat 283  Q
    ||||| ||||||||||||  | ||||| |||||||||||| ||||||| |||| ||||||| ||  ||||||||||||||||    
T  8010259 gataaacaacttaattaagtgtttatcatataagtgcttaggtataagctatttctataac-aacaataaaataaagtcaat 8010339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 21959652 - 21959713
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattt 285  Q
    ||||| || ||||||||| ||||||| |||| | ||||| ||||||||||||||||||||||    
T  21959652 ttatcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaattt 21959713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 22742287 - 22742348
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||| ||||| |||||| ||||  |||||| || ||||||||||||||||    
T  22742287 cgcttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaa 22742348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 27890010 - 27889937
Alignment:
Q  203 ataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    |||| |||||||||||| |  ||||| ||| |||||||||||| |||||||| ||||||| | |||||||||||    
T  27890010 ataaacaacttaattaagcatttatcatatgagtgcttatgtacaagttatttctataacaacagataaaataa 27889937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 31958735 - 31958682
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataa 248  Q
    |||||| ||||| |||||||||||||||||||| ||| ||| ||||||||||||    
T  31958735 ctgttttgataaacaacttaattaaacgcttatagtagaagggcttatgtataa 31958682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 32975899 - 32975960
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| || |||||||| |||||||||||||||| || |||| ||| |||||||||||||||    
T  32975899 cgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaa 32975960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 8420345 - 8420285
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||||||||||| |||||||| || |||  || ||||||||||||||||    
T  8420345 gcttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaa 8420285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 29940729 - 29940781
Alignment:
Q  233 aagtgcttatgtataagttattcctataactaaagataaaataaagtcaattt 285  Q
    ||||||||| ||||||| | || ||||||| ||||||||||||||||||||||    
T  29940729 aagtgcttaagtataagctttttctataacaaaagataaaataaagtcaattt 29940781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 4420540 - 4420599
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||| |  ||||||||||| || | ||||||| |||||||||||||||||||    
T  4420540 cttatcgtataaatatttatgtataagctacttctataacaaaagataaaataaagtcaa 4420599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 7148597 - 7148640
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||    
T  7148597 tataagtgcttatgtataagctatttctacaactaaagataaaa 7148640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 29274376 - 29274317
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| || || |||||||||||||| |||| ||||| | |||||||||||||||||||    
T  29274376 cttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaa 29274317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 9559680 - 9559634
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||| |||||||||||||||||| ||||| | ||||||||||||||    
T  9559680 ataagcgcttatgtataagttatttctatagcaaaagataaaataaa 9559634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 27727227 - 27727165
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagtta-ttcctataactaaagataaaataaag 278  Q
    ||||| |||||| ||||||||||||| || |||||| || |||||| ||||||||||||||||    
T  27727227 taaacacttatcatataagtgcttatatacaagttattttctataattaaagataaaataaag 27727165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 31668831 - 31668781
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaat 274  Q
    ||||| |||||||||||||||||||| |||| ||||||| ||| |||||||    
T  31668831 ttatcatataagtgcttatgtataagctatttctataacaaaacataaaat 31668781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 34544581 - 34544539
Alignment:
Q  239 ttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||    
T  34544581 ttatgtataagttatttctataacaaaagataaactaaagtca 34544539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 3169403 - 3169338
Alignment:
Q  212 ttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||| |||| |||||| ||||||||||||||| |||  |||| ||||||| |||||| |||||||    
T  3169403 ttaatgaaacacttatcatataagtgcttatgtgtaacctatttctataacaaaagatgaaataaa 3169338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 4247772 - 4247731
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    |||||||||||||||||| |||| ||||||| ||||||||||    
T  4247772 taagtgcttatgtataagctatttctataacaaaagataaaa 4247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 10452505 - 10452448
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||| |||||||||||||||| |||| ||||||| ||| |||||||||| ||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaa 10452448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 13360656 - 13360717
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| |||||||||||||||  ||  |||| ||||||| ||| |||||||||||||||    
T  13360656 cgcttatcatataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtcaa 13360717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 20672006 - 20671953
Alignment:
Q  229 gtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||| ||||||||||| |||| ||| | | |||||||||||||||||||    
T  20672006 gtataagtgattatgtataagctatttctagatcaaaagataaaataaagtcaa 20671953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 31672002 - 31672047
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||| |||| ||||||||||||| ||||||| ||||||||||||||    
T  31672002 taagcgcttctgtataagttatttctataacaaaagataaaataaa 31672047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 1810445 - 1810393
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||| |||||||||||||| | ||| |||| ||||||| ||||||||||||||    
T  1810445 tatcatataagtgcttatgcaaaagctatttctataacaaaagataaaataaa 1810393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 2206513 - 2206569
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||||||||   || |||||||||||||  |||||| ||||||||||||||||    
T  2206513 cttatcgtataagcatttctgtataagttatttttataacaaaagataaaataaagt 2206569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 6654545 - 6654597
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| |||||||||||||||||| ||||||| ||  ||||||| |||||||    
T  6654545 tataagggcttatgtataagttatttctataacaaataataaaattaagtcaa 6654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 12631543 - 12631587
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaata 275  Q
    |||||| |||||||||||| |||| ||||||| ||||||||||||    
T  12631543 ataagttcttatgtataagctatttctataaccaaagataaaata 12631587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 33823453 - 33823389
Alignment:
Q  197 gtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataa 261  Q
    |||||||| | ||||||||||||||||||||  ||||| || ||||| ||||| |||| ||||||    
T  33823453 gtttggatcaacaacttaattaaacgcttattatataaatgtttatgcataagctatttctataa 33823389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 5276122 - 5276206
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||  ||||||||||| || ||||||| |||||||||||||||||| ||||  |||||| |||||||| ||||||||||    
T  5276122 tttggataaaaaacttaattaagcgtttatcgtttaagtgcttatgtataagctatttttataacaaaagataacataaagtcaa 5276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 35536015 - 35536109
Alignment:
Q  208 caacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa--ttttttcatattagttat 300  Q
    |||||||||| | |||||||| |||||  ||||||||||||| |||| |||||||  ||||||||||||||||||  | ||||||||| ||||||    
T  35536015 caacttaattgagcgcttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttat 35536109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 2223071 - 2223130
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||||| ||||||||||| |||| ||||||| |||||||||  ||||||||    
T  2223071 cttatcgtataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaa 2223130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 21853290 - 21853207
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||| || |||||||||    |||| ||||||||| |||| ||||||||||| |||| || ||||||||||||||||    
T  21853290 tgtttggataaacagcttaattaataatttatagtataagtgattatatataagttatttctattacaaaagataaaataaagt 21853207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 27121760 - 27121674
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||  ||||||||| || |||||||| ||||| | |||||||||||| |||| ||||||  || ||||||||||||||||    
T  27121760 ctgtttggatacacaacttaat-aagcgcttatcatataattccttatgtataagatatttctataataaatgataaaataaagtcaa 27121674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 28515281 - 28515190
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttt 287  Q
    ||||||||||| || ||||| ||| ||||| | ||| || || ||||||||||||| || |||| |  ||||||||||||||||||||||||    
T  28515281 tgtttggataatcagcttaactaagcgcttttggtagaattgattatgtataagttctttctatgatgaaagataaaataaagtcaattttt 28515190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 2013123 - 2013173
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaat 274  Q
    ||||||||||| ||||||||||||| ||||| ||||||| |||||||||||    
T  2013123 ttatcgtataaatgcttatgtataatttatttctataacaaaagataaaat 2013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 5006639 - 5006597
Alignment:
Q  240 tatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaa 5006597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 5373147 - 5373205
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtc 280  Q
    ||||||| | |||||||||||||||| | |||| ||||||| |||||||||||||||||    
T  5373147 gcttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 7244626 - 7244684
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||||||||||||||||| |||| ||||| | |||||||||| ||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaa 7244684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 25507246 - 25507320
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagat 269  Q
    |||||||||||| |||||||||||| | ||| | | ||||||| |||||||||||||||| ||||| | ||||||    
T  25507246 ctgtttggataaacaacttaattaagcacttttaggataagtgtttatgtataagttatttctataccaaaagat 25507320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 25511549 - 25511615
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttttt 288  Q
    ||||||| |||||||| |  ||||||| ||||| ||||||| |||||| ||||||||||||||||||    
T  25511549 gcttatcatataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaatttttt 25511615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 28165023 - 28165073
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||||||| || ||||||| ||||||||||| |||||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaa 28165073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 44241781 - 44241839
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||| ||||||||  ||||||||||||||| ||||||| | ||||||||||||||    
T  44241781 cgcttatcatataagtgtgtatgtataagttatttctataacaacagataaaataaagt 44241839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 5005969 - 5005900
Alignment:
Q  208 caacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||||||||||||||||||| | ||||||||||  |||||| |||| ||| ||| ||||||||| ||||    
T  5005969 caacttaattaaacgcttatcatctaagtgcttacatataagctatttctacaacaaaagataaagtaaa 5005900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 31341115 - 31341176
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| | ||| |||||||||||||| ||||  |||||| |||||||||||||||||||    
T  31341115 cgcttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaataaagtcaa 31341176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 46091492 - 46091573
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||||||||| ||| ||||| ||  | |||||  || |||||||||| ||||| |||||||||||| ||||||||||||||    
T  46091492 tgtttggataaacaatttaatgaagtgtttatcacatgagtgcttatgcataagctattcctataacgaaagataaaataaa 46091573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 1431456 - 1431396
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||| |||||||||||||||| | ||||  ||| |||||||||||||||    
T  1431456 gcttatcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaa 1431396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 6552417 - 6552365
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaata 275  Q
    |||||| |||||||||||||||| |||||||| ||| ||| ||||||||||||    
T  6552417 cttatcatataagtgcttatgtacaagttatttctacaacaaaagataaaata 6552365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 24973874 - 24973926
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||||| ||| |||| ||||||| |||||||||||||| ||||    
T  24973874 tataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaa 24973926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 27626300 - 27626212
Alignment:
Q  194 actgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||| || |||||||||  | ||||  ||||| || ||||||||||| |||| ||||| | |||| ||||||||||||||    
T  27626300 actgtttggataaacaccttaattaagtgtttatgctataattgtttatgtataagctatttctatatcaaaagctaaaataaagtcaa 27626212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 33894555 - 33894599
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||    
T  33894555 taagtgcttatgtataagctatttctataacaaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 34441016 - 34441068
Alignment:
Q  227 tcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||| ||||||||||| ||||||||| |||| || |||||||||||||    
T  34441016 tcgtataagggcttatgtatacgttattcctctaacaaacgataaaataaagt 34441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 49060462 - 49060522
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||  ||||||||||| |||| ||||||| ||| |||||||||||||||    
T  49060462 gcttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaa 49060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 991965 - 992048
Alignment:
Q  196 tgtttggataaccaacttaattaaac-gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    ||||||||||| || ||||||| ||  | ||||| |||||||||||| ||||||||| || ||||||| ||| |||||||||||    
T  991965 tgtttggataaacaccttaatttaagtgtttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaag 992048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 277
Target Start/End: Complemental strand, 1432099 - 1432060
Alignment:
Q  238 cttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  1432099 cttatgtataagttatttctataacaaaagataaaataaa 1432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 36532290 - 36532333
Alignment:
Q  239 ttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||    
T  36532290 ttatgtataagttatccctataacaaaagataaaacaaagtcaa 36532333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 46213728 - 46213783
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtc 280  Q
    |||| |||||||||||||||| ||| |||| ||||||| ||| |||||||||||||    
T  46213728 tatcatataagtgcttatgtaaaagctatttctataacaaaatataaaataaagtc 46213783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 279
Target Start/End: Complemental strand, 47395244 - 47395189
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||| |||||||| ||||||||||||||||  ||| |||||||||||||| ||||    
T  47395244 ttatcatataagtggttatgtataagttatttatatcactaaagataaaatcaagt 47395189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 12835090 - 12835009
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa--ttttttcatattag 296  Q
    |||||||||| ||||| |||||||||| | | | |||| ||| ||| |||||||||||||||||||  | ||||||||||||    
T  12835090 taaacgcttagcgtatgagtgcttatgcagatgctatttctacaacaaaagataaaataaagtcaaattgttttcatattag 12835009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 29574759 - 29574689
Alignment:
Q  212 ttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| || ||||| ||||| |||||||||||||| ||||  ||| || |||||| ||||||||||||    
T  29574759 ttaattaagcgtttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataaagtcaa 29574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 35007543 - 35007581
Alignment:
Q  239 ttatgtataagttattcctataactaaagataaaataaa 277  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  35007543 ttatgtataagctatttctataactaaagataaaataaa 35007581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 39539935 - 39539877
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttatt 254  Q
    ||||||||||| ||||||||||||  ||||||| ||||| ||||| |||||||| ||||    
T  39539935 tgtttggataaacaacttaattaagtgcttatcatataactgcttttgtataagctatt 39539877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 39591593 - 39591555
Alignment:
Q  244 tataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaa 39591555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 45593865 - 45593807
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||| |||||||||||||| |||| || |||| ||| |||||||||||||||    
T  45593865 ttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaa 45593807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 3610893 - 3610836
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaat 274  Q
    ||||| ||| || |||||||||||||||||||| |||| ||| ||| |||||||||||    
T  3610893 taaacacttgtcatataagtgcttatgtataagctatttctacaacaaaagataaaat 3610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 35809041 - 35808992
Alignment:
Q  233 aagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||||||||| |||| ||||||| |||||||||||| ||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaa 35808992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 38713261 - 38713200
Alignment:
Q  198 tttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctat 259  Q
    ||||||||| |||||||||||| |  ||||| |||||||| || ||||||||||||| ||||    
T  38713261 tttggataaacaacttaattaagcatttatcttataagtgattgtgtataagttatttctat 38713200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 22388057 - 22388001
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    ||||| |||||| | |||||||||||| ||||| |||| ||||||| ||||||||||    
T  22388057 taaacacttatcatttaagtgcttatggataagctatttctataacaaaagataaaa 22388001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 24975826 - 24975882
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    ||||||| |||||||||| ||||||||  || | ||||||| |||||||||||||||    
T  24975826 gcttatcatataagtgctgatgtataatctacttctataacaaaagataaaataaag 24975882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 28178910 - 28178950
Alignment:
Q  241 atgtataagttattcctataactaaagataaaataaagtca 281  Q
    ||||||||| |||| ||||||| ||||||||||||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtca 28178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 28844407 - 28844459
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    ||||||| ||||||||||||||||||||| |||| | ||||  ||||||||||    
T  28844407 cgcttattgtataagtgcttatgtataagatatttcgataaaaaaagataaaa 28844459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 42656453 - 42656497
Alignment:
Q  238 cttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||| |||| ||||||| |||||||||||||||||||    
T  42656453 cttatatataagctatttctataacaaaagataaaataaagtcaa 42656497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 10143095 - 10143154
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  10143095 cttatcgaataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaa 10143154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 28803659 - 28803594
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||||| ||||||||||||| ||||||||||| | ||||| |||||||||||||||||||    
T  28803659 taaatgcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaa 28803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 33197392 - 33197327
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||| ||||||||||||| |||||| |||| ||||||| ||||||| |||||||||||    
T  33197392 taaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 10150651 - 10150731
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    ||||| ||||| |||||||||||| | |||||  |||||||| |||||||||||||||| ||||||  |||||||||||||    
T  10150651 tgtttagataaacaacttaattaagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataa 10150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 10198626 - 10198555
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttttcatat 293  Q
    ||||||| ||||||| ||| |||||||| ||||| ||||| ||||||||||||||||||| | |||||||||    
T  10198626 gcttatcatataagtacttttgtataagctattcatataagtaaagataaaataaagtcactattttcatat 10198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 15173443 - 15173506
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtc 280  Q
    ||||||||||||||| |||||  ||||||||||||||| ||||||| |||||| ||||||||||    
T  15173443 taaacgcttatcgtacaagtgtctatgtataagttatttctataacaaaagatgaaataaagtc 15173506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 43431593 - 43431514
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttttcatattagttat 300  Q
    |||||||| |||||||| | |||||||||||||| | ||||| ||||||||| ||||||| ||| |||||||| ||||||    
T  43431593 cgcttatcatataagtgttaatgtataagttatttcaataacaaaagataaagtaaagtcgattgtttcatataagttat 43431514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 25609727 - 25609781
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattt 285  Q
    ||||||||||||||||||| |||| ||||||  ||||||||||||||||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaattt 25609781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 14278075 - 14277982
Alignment:
Q  189 taggtactgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| |||||||||||  ||  || ||||| ||||||  ||||||||||||||||||||  |||| ||||||||||| || ||||||||||||    
T  14278075 taggttctgtttggatatacaggtttattaagcgcttacggtataagtgcttatgtataaactatttctataactaaacattaaataaagtcaa 14277982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 34339040 - 34339104
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtca 281  Q
    ||||| |||||| |||||||||||||||||||  | || ||||| ||||||||||||||||||||    
T  34339040 taaacacttatcatataagtgcttatgtataaactttttctatagctaaagataaaataaagtca 34339104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 13864580 - 13864643
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattttttcatat 293  Q
    |||||||| ||||||||||| |||| ||||||| |||| |||||||||||| ||||||| ||||    
T  13864580 tataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtcgatttttttatat 13864643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 17952848 - 17952789
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| |||||| |||||| |||||| |||| ||||||| |||||||||||||||||||    
T  17952848 cttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaa 17952789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 3673737 - 3673786
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||||||||| ||||||| ||||||| ||| ||||||||||||    
T  3673737 tataagtgcttatgtattagttatttctataacaaaatataaaataaagt 3673786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 31461363 - 31461420
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| |||||||| |||| |||||| |||| ||||||| |||||||||||||||||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaa 31461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 35809854 - 35809914
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| ||||||||||||||||||||||||| | || || |||||||||||||| ||||    
T  35809854 cgcttatcatataagtgcttatgtataagttatttccatgac-aaagataaaataaaatcaa 35809914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 3611157 - 3611205
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  3611157 ataagtgcttatgtataagttatttctatagcaaaaggtaaaataaagt 3611205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 11344424 - 11344372
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||||| ||||| |||| ||||||| |||||||||| ||||||||    
T  11344424 tataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaa 11344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 26484257 - 26484193
Alignment:
Q  197 gtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataa 261  Q
    |||||||||| |||||||||||| |  ||||| |||||||||||||| ||||| |||| ||||||    
T  26484257 gtttggataaacaacttaattaatcatttatcatataagtgcttatggataagctatttctataa 26484193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 37766720 - 37766780
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| ||||||||||||||||| || ||||| ||| || ||| |||||||||||||||    
T  37766720 gcttatcatataagtgcttatgtattagctattcatatgacaaaaaataaaataaagtcaa 37766780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 27288556 - 27288615
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| |||||||||||||||| ||||| || ||||||  |||||||||||||| ||||    
T  27288556 cttatcctataagtgcttatgtaaaagttgtttctataataaaagataaaataaaatcaa 27288615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 33576733 - 33576682
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| |||||||||||| |||||| ||||||| ||||||| |||||||||||    
T  33576733 ataaatgcttatgtataggttatttctataacaaaagatacaataaagtcaa 33576682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 34055040 - 34054993
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    ||||||||||||||||| | |||| ||||||| |||||||||||||||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaaataaag 34054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 38916432 - 38916397
Alignment:
Q  244 tataagttattcctataactaaagataaaataaagt 279  Q
    |||||||| |||||||||||||||||||||||||||    
T  38916432 tataagtttttcctataactaaagataaaataaagt 38916397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 5045295 - 5045245
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| ||||||||||| ||||  |||||| |||||||||||||||||||    
T  5045295 taagtgtttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 5133708 - 5133750
Alignment:
Q  236 tgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    |||||||||||||| |||| ||||||| |||||||||||||||    
T  5133708 tgcttatgtataagctatttctataacaaaagataaaataaag 5133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 5511494 - 5511559
Alignment:
Q  229 gtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa--ttttttcata 292  Q
    |||| ||||||| ||||||||||||| ||||||  ||| |||||||||||||||  ||||||||||    
T  5511494 gtatcagtgcttctgtataagttatttctataatgaaatataaaataaagtcaaacttttttcata 5511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Complemental strand, 32098442 - 32098396
Alignment:
Q  236 tgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||| |||| ||||||| |||||||||||||||||||    
T  32098442 tgcttatatataagctatttctataacaaaagataaaataaagtcaa 32098396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 35252268 - 35252210
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||| || ||||||||| ||||||||| |||  |||||||||||||||||||    
T  35252268 ttatcatataaatgtttatgtatatgttattcctttaataaaagataaaataaagtcaa 35252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 38239689 - 38239639
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| ||||||||||| |||| ||||||| ||||||||||| |||||||    
T  38239689 taagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaa 38239639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 7936922 - 7936999
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    ||||||||||| ||||||||||||  |||| |   ||||||||||||||||||   ||| ||||||| ||||||||||    
T  7936922 tgtttggataaacaacttaattaagtgcttttaacataagtgcttatgtataaaccatttctataacaaaagataaaa 7936999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 31740092 - 31740047
Alignment:
Q  238 cttatgtataa-gttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| | |||| |||||||||||||||||||||||||||    
T  31740092 cttatgtataaagctatttctataactaaagataaaataaagtcaa 31740047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 35755655 - 35755590
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||| ||||||||||| ||||||||||| |||| ||||||  ||| | |||||||||||||    
T  35755655 taaacacttgtcgtataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaa 35755590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 41033088 - 41033047
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaa 273  Q
    |||||||||||||||||| |||| ||||||| ||||||||||    
T  41033088 taagtgcttatgtataagctatttctataacaaaagataaaa 41033047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 3423916 - 3423856
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| || ||||| ||||||||||||||||  | || | |||||||||||||||||||    
T  3423916 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 3423856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 5903231 - 5903283
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||| ||| |||||| ||||||| ||| |||||||||||||||    
T  5903231 tataagttcttatgcatacgttatttctataacaaaatataaaataaagtcaa 5903283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 9478221 - 9478281
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||| ||||||||||| |||| |||||||   |||||||||||| ||||    
T  9478221 gcttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaa 9478281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 13630421 - 13630369
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| |||||||||||||||||||| || || | |||||||| ||||||||||    
T  13630421 tataggtgcttatgtataagttatttctctatcaaaagataagataaagtcaa 13630369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 15171180 - 15171232
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| ||||||||||||| || |||||||  |||||||| |||||||||    
T  15171180 tataagtgtttatgtataagttttttctataacagaagataaattaaagtcaa 15171232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 29629128 - 29629080
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||||||||| |||||| || | || ||||||||||||||||    
T  29629128 ataagtgcttatgtatatgttatttctgtgacaaaagataaaataaagt 29629080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 29729820 - 29729904
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||| ||||| ||  ||||||||  | |||||||||||||||||| ||||| | ||||  |||||| ||||||||| ||||||    
T  29729820 ctgtttagataaacattttaattaagtgattatcgtataagtgcttacgtatatgctatttttataacaaaagataaattaaagt 29729904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 37053517 - 37053596
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa--ttttttcatattagttat 300  Q
    |||||| ||||||||||||||||||   |||| |||||||  || |||||||||||||||  | ||||||||| ||||||    
T  37053517 cttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttat 37053596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 40356767 - 40356853
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| |||| |||||||||||||| ||| || ||||||||||||| |||||| ||||  |||||  |||||||||||||||||||    
T  40356767 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 40356853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 14482124 - 14482184
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  14482124 gcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaa 14482184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 29699178 - 29699236
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||| |||||||||| |||||||| ||||||| |||||||||||||||||||    
T  29699178 ttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaa 29699236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 11494049 - 11494148
Alignment:
Q  198 tttggataaccaacttaatta--aacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa--ttttttcatat 293  Q
    ||||||||| |||||||||||  || ||||||| ||||||||||| |||||| ||||||   ||||| |||||||| ||||||||||  |||||||||||    
T  11494049 tttggataaacaacttaattataaatgcttatcatataagtgcttttgtatatgttattttcataacaaaagataacataaagtcaaacttttttcatat 11494148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 42597303 - 42597380
Alignment:
Q  202 gataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||| |||||| ||  ||||||  ||||||| |||||||||||| |||| ||||||| ||||||||||||||||    
T  42597303 gataaccagcttaatcaagtgcttatgctataagtacttatgtataagctatttctataacaaaagataaaataaagt 42597380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 40728566 - 40728506
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||||||| | ||| |||||||||| ||||||| |||||||||||||||||||    
T  40728566 gcttatcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaa 40728506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 11188295 - 11188248
Alignment:
Q  230 tataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||    
T  11188295 tataagtgcttatgtataagttgtttctataacaaaagataaaataaa 11188248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 34563174 - 34563232
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||||||||||| ||||||||||| |||| || || ||||||||||||||||    
T  34563174 ttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaa 34563232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 38874554 - 38874620
Alignment:
Q  208 caacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaat 274  Q
    |||||||||||  |  |||||||||||||| ||||||||||||| || || ||||||||||||||||    
T  38874554 caacttaattatgcatttatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaat 38874620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 40280354 - 40280296
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||| ||||||||| ||| ||||||||||| ||| ||| ||||||||||||||||    
T  40280354 cgcttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaagt 40280296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 41620465 - 41620379
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| ||| | ||||||  | ||||| || |||||||||| |||||||||||  | |||| |||||||||||||||||||    
T  41620465 tgtttggataaacaaatcaattaagtggttatcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaa 41620379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 1561210 - 1561251
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaa 272  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  1561210 ataagtgcttatgtataagttatttctataacgaaagataaa 1561251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 2093160 - 2093220
Alignment:
Q  190 aggtactgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagt 250  Q
    |||| ||| ||||| || |||||||||||| ||||||||| ||||||||||||| ||||||    
T  2093160 aggtcctgcttggacaaacaacttaattaagcgcttatcgcataagtgcttatgaataagt 2093220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 26215427 - 26215475
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||| ||||||||||||| |||| ||||||| ||||||||||||||||    
T  26215427 ataagcgcttatgtataagctatttctataacaaaagataaaataaagt 26215475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 28769487 - 28769427
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| ||||| |||||||||||||| |||||||||||| ||  ||||||| |||||||    
T  28769487 gcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaa 28769427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 39392809 - 39392749
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| ||||||||  |||||||||  |||| ||||||| |||||||||||||||||||    
T  39392809 gcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaa 39392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 8194076 - 8194025
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaat 283  Q
    |||||||||||| ||||| |||| |||||| ||||| |||||||||||||||    
T  8194076 taagtgcttatggataagctatttctataagtaaagttaaaataaagtcaat 8194025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 12361115 - 12361174
Alignment:
Q  224 ttatcgtat-aagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||| |||| ||||| ||||||||||| |||||| |||||||||||| |||||||    
T  12361115 ttatcgtatgaagtacttatatataagttatttctataaataaagataaaatgaagtcaa 12361174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 26813952 - 26813897
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataac-taaagataaaataaa 277  Q
    |||||| ||||||||||||||||||| ||||| |||||||  ||||||||||||||    
T  26813952 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 26813897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 26820142 - 26820181
Alignment:
Q  243 gtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaa 26820181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 12225037 - 12224987
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| |||||||||||||||||| |||  || |||||||||||||||||||    
T  12225037 taagagcttatgtataagttatttctaagacaaaagataaaataaagtcaa 12224987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 35298624 - 35298570
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaag 278  Q
    ||||| |||||||||||||||||||| |||| |  |||| |||||||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaag 35298570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 35535007 - 35534949
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||||||||||| |||||| |||| ||||||  |||| ||||||||||||||    
T  35535007 ttatcatataagtgcttatatataagctatttctataataaaagttaaaataaagtcaa 35534949  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 9928187 - 9928228
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaa 272  Q
    ||||||| |||||||||||||||| ||||||| |||||||||    
T  9928187 ataagtgtttatgtataagttatttctataacaaaagataaa 9928228  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 10114421 - 10114466
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    ||||||||||||||||||| |||| ||||| | |||||||||||||    
T  10114421 ataagtgcttatgtataagctatttctatagcaaaagataaaataa 10114466  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 11119132 - 11119087
Alignment:
Q  237 gcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| | |||| ||||||| |||||||||||||||||||    
T  11119132 gcttatgtatacgatatttctataacaaaagataaaataaagtcaa 11119087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 16163410 - 16163369
Alignment:
Q  238 cttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||||||||| |||| |||||||||||||||||| |||||    
T  16163410 cttatgtataagctatttctataactaaagataaaacaaagt 16163369  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 27320233 - 27320297
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||| ||||||  ||||||||||| ||||||| |||||||||| | |||||| ||||||||||||    
T  27320233 taaacacttatcacataagtgcttacgtataagctattcctatagcaaaagat-aaataaagtcaa 27320297  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 31884515 - 31884568
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaat 274  Q
    |||||||| || |||||| ||||||||||||||| ||||||| ||| |||||||    
T  31884515 cgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaat 31884568  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 32506988 - 32507033
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataa 276  Q
    ||||||| |||||||||||||||| ||| ||| |||||||||||||    
T  32506988 ataagtgtttatgtataagttatttctacaacaaaagataaaataa 32507033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 34788576 - 34788515
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||| ||||| |||||| ||||||| ||||  ||| || |||||||||||||||||||    
T  34788576 cgcttatcatataaatgcttacgtataagctatttttatgaccaaagataaaataaagtcaa 34788515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 38561647 - 38561708
Alignment:
Q  221 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||  ||||||||  ||| |||||||||||  |||||| |||||||||||||||||||    
T  38561647 cgcttattatataagtgtctatatataagttatttatataacaaaagataaaataaagtcaa 38561708  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 8799327 - 8799387
Alignment:
Q  222 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||| |||| |||||| | | || |||||| ||||||| |||||||||||||||||||    
T  8799327 gcttatcatatatgtgcttgtatgtatgttatttctataacaaaagataaaataaagtcaa 8799387  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 11813258 - 11813198
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||||||| |||||||||||||||| ||| |||| || |||  ||| ||||||||||    
T  11813258 taaacgcttatcatataagtgcttatgtacaagatatttctctaaacaaatataaaataaa 11813198  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 14247386 - 14247354
Alignment:
Q  216 ttaaacgcttatcgtataagtgcttatgtataa 248  Q
    ||||||||||||| |||||||||||||||||||    
T  14247386 ttaaacgcttatcatataagtgcttatgtataa 14247354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 18356242 - 18356298
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    |||||| ||||| ||||||||| |||||| || ||||| | ||||||||||||||||    
T  18356242 cttatcatataattgcttatgtgtaagttgtttctatagcaaaagataaaataaagt 18356298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 26717152 - 26717237
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||||||| | || ||||||||| | |||||| ||||||||||| || ||||| || |  ||||||  ||||||||||||||||||    
T  26717152 ctgtttggatcaacagcttaattaagcacttatcatataagtgcttctgaataagctaattttataac--aagataaaataaagtcaa 26717237  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 31296001 - 31296049
Alignment:
Q  194 actgtttggataaccaacttaattaaacgcttatcgtataagtgcttat 242  Q
    ||||||| ||||| ||||||||||||||| |||| ||||||||| ||||    
T  31296001 actgtttcgataaacaacttaattaaacgattatagtataagtgtttat 31296049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 37444554 - 37444506
Alignment:
Q  231 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||| ||||||||||||| |||| ||||||| ||||||||| ||||||    
T  37444554 ataagcgcttatgtataagctattactataacaaaagataaagtaaagt 37444506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 42568711 - 42568792
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagt 279  Q
    ||||||||||| ||||||||| |||| |||||| ||||||  ||||  |||||| |||| ||| |||  |||||||||||||||    
T  42568711 tgtttggataaacaacttaatcaaacacttatcatataagcactta--tataagctatttctaaaacagaagataaaataaagt 42568792  T

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Target: scaffold0590 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 1219 - 1162
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 1162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 2756 - 2813
Alignment:
Q  225 tatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 2813  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 27499 - 27558
Alignment:
Q  223 cttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||||| | ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  27499 cttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaa 27558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 23806 - 23888
Alignment:
Q  195 ctgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaa 277  Q
    |||||||||||| |||||||||||||| |||||| || ||| |||||  |||||| |||| ||||||| |||||| |||||||    
T  23806 ctgtttggataaacaacttaattaaacacttatcataaaagcgcttacatataagctatttctataacaaaagatgaaataaa 23888  T

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Target: scaffold0549 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 1897 - 1809
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattt 285  Q
    |||||||||||  | ||||||||| |||||| | ||||||||||||| |||||| || | ||||||| |||||||||||||||| |||||    
T  1897 tgtttggataaagaccttaattaagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaattt 1809  T

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Target: scaffold0549; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 3987 - 3899
Alignment:
Q  196 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaattt 285  Q
    |||||||||||  | ||||||||| |||||| | ||||||||||||| |||||| || | ||||||| |||||||||||||||| |||||    
T  3987 tgtttggataaagaccttaattaagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaattt 3899  T

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Target: scaffold0508 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 9928 - 9863
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    |||| ||||||| |||| |||||||||||||||||||| ||||||| ||| ||||||| |||||||    
T  9928 taaatgcttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaa 9863  T

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Target: scaffold0654 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 6812 - 6725
Alignment:
Q  196 tgtttggataaccaacttaat-taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| ||||||||| ||| | |||||| |||||||||||||||||||  |||| ||||||| ||| ||||| | |||||||    
T  6812 tgtttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 6725  T

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Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 42541 - 42592
Alignment:
Q  224 ttatcgtataagtgcttatgtataagttattcctataactaaagataaaata 275  Q
    ||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  42541 ttatcatataagtgcttatgtataagtcatttctataacaaaagataaaata 42592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 116731 - 116644
Alignment:
Q  196 tgtttggataaccaacttaat-taaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||| ||||||||| ||| | |||||| |||||||||||||||||||  |||| ||||||| ||| ||||| | |||||||    
T  116731 tgtttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 116644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 5806 - 5744
Alignment:
Q  217 taaacgcttatcgtataagtgcttatgtataagtta-ttcctataactaaagataaaataaag 278  Q
    ||||| |||||| ||||||||||||| || |||||| || |||||| ||||||||||||||||    
T  5806 taaacacttatcatataagtgcttatatacaagttattttctataattaaagataaaataaag 5744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 20111 - 20161
Alignment:
Q  232 taagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 282  Q
    ||||||||||||||||   |||| ||||||| |||||||||||||||||||    
T  20111 taagtgcttatgtatatactatttctataaccaaagataaaataaagtcaa 20161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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