View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2375_low_27 (Length: 292)

Name: NF2375_low_27
Description: NF2375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2375_low_27
NF2375_low_27
[»] chr1 (17 HSPs)
chr1 (179-292)||(30855927-30856040)
chr1 (70-125)||(171443-171498)
chr1 (70-125)||(26252810-26252864)
chr1 (70-125)||(51466466-51466521)
chr1 (79-125)||(41147290-41147336)
chr1 (70-122)||(29373960-29374012)
chr1 (70-125)||(39840511-39840566)
chr1 (70-125)||(46728719-46728774)
chr1 (79-125)||(43380549-43380595)
chr1 (71-125)||(51465752-51465806)
chr1 (70-123)||(29373140-29373193)
chr1 (70-123)||(39841270-39841323)
chr1 (80-125)||(46046439-46046484)
chr1 (70-125)||(43379770-43379825)
chr1 (70-125)||(51994716-51994771)
chr1 (71-125)||(272768-272822)
chr1 (70-123)||(1743209-1743262)
[»] chr5 (12 HSPs)
chr5 (70-125)||(40366260-40366315)
chr5 (70-125)||(19432546-19432601)
chr5 (74-125)||(31558239-31558290)
chr5 (70-125)||(16899910-16899965)
chr5 (70-124)||(3098306-3098360)
chr5 (73-123)||(6895206-6895256)
chr5 (70-125)||(3099092-3099147)
chr5 (70-125)||(3779485-3779540)
chr5 (70-123)||(29096830-29096883)
chr5 (70-123)||(29627134-29627187)
chr5 (72-125)||(31559041-31559094)
chr5 (70-123)||(39084317-39084370)
[»] chr2 (10 HSPs)
chr2 (70-125)||(15994484-15994539)
chr2 (79-125)||(11735798-11735844)
chr2 (72-125)||(2075674-2075727)
chr2 (79-124)||(914381-914426)
chr2 (70-125)||(3834927-3834982)
chr2 (70-125)||(16011366-16011421)
chr2 (70-125)||(5429050-5429105)
chr2 (70-125)||(26882741-26882796)
chr2 (74-125)||(39233938-39233989)
chr2 (79-125)||(44075836-44075882)
[»] chr3 (7 HSPs)
chr3 (70-124)||(54295099-54295153)
chr3 (73-125)||(42489286-42489338)
chr3 (74-125)||(43656221-43656272)
chr3 (79-123)||(42488454-42488498)
chr3 (70-125)||(54280853-54280908)
chr3 (70-125)||(44706911-44706966)
chr3 (79-125)||(21102598-21102644)
[»] chr7 (9 HSPs)
chr7 (72-125)||(37796598-37796651)
chr7 (70-123)||(14419392-14419445)
chr7 (70-125)||(17995850-17995905)
chr7 (70-125)||(32497001-32497056)
chr7 (70-125)||(40193861-40193916)
chr7 (79-125)||(789299-789345)
chr7 (70-123)||(16779796-16779849)
chr7 (72-125)||(41345436-41345489)
chr7 (71-124)||(46468103-46468156)
[»] chr8 (8 HSPs)
chr8 (70-125)||(7601712-7601767)
chr8 (70-125)||(39528864-39528919)
chr8 (70-123)||(42093429-42093482)
chr8 (70-125)||(30136721-30136776)
chr8 (70-123)||(40784809-40784862)
chr8 (74-125)||(30427081-30427132)
chr8 (79-125)||(14446062-14446108)
chr8 (95-125)||(43937326-43937356)
[»] chr4 (9 HSPs)
chr4 (70-125)||(865416-865471)
chr4 (70-123)||(54110486-54110539)
chr4 (70-125)||(51162915-51162970)
chr4 (72-122)||(42712139-42712189)
chr4 (70-125)||(29144852-29144907)
chr4 (70-125)||(29517837-29517892)
chr4 (70-125)||(44876066-44876121)
chr4 (70-123)||(9170691-9170744)
chr4 (70-125)||(29145240-29145295)
[»] scaffold0014 (1 HSPs)
scaffold0014 (70-125)||(135484-135539)
[»] chr6 (3 HSPs)
chr6 (70-125)||(545188-545242)
chr6 (70-122)||(544343-544395)
chr6 (77-125)||(1822940-1822988)


Alignment Details
Target: chr1 (Bit Score: 114; Significance: 7e-58; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 30856040 - 30855927
Alignment:
Q  179 agacattcatagtgttaaagtgttgtcgtggagcagcgctactggcataccttttatttgctgacgattcttttttccgagaccaaagagagtgaagtta 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30856040 agacattcatagtgttaaagtgttgtcgtggagcagcgctactggcataccttttatttgctgacgattcttttttccgagaccaaagagagtgaagtta 30855941  T
Q  279 gagatttacttgat 292  Q
    ||||||||||||||    
T  30855940 gagatttacttgat 30855927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 171443 - 171498
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  171443 acagggacgaaaatcaaaactgactcaaattacagagacgattatcatatttaagc 171498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 26252810 - 26252864
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26252810 acagggacgaaaatcaaaactgactcaaattac-aggacaattatcatatttaagc 26252864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 51466466 - 51466521
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||||||||  |||||| |||||||||||||||||||||||    
T  51466466 acagggacgaaaatcaaaactgacctaaattataaggacgattatcatatttaagc 51466521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 41147290 - 41147336
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||    
T  41147290 aaaatcaaaactggcccaaattacaaggacgattatcatatttaagc 41147336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 29373960 - 29374012
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatattta 122  Q
    |||| ||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  29373960 acagtgacgaaaatcaaaactgatccaaattacaaggacgattatcatattta 29374012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 39840566 - 39840511
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||||||||  |||||||| ||| |||||||||||||||||    
T  39840566 acagggacgaaaatcaaaactgaccaaaattacatggatgattatcatatttaagc 39840511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 46728719 - 46728774
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  46728719 acagggacgaaaatcaaaactgacccaaactacagtgacgattatcatatttaagc 46728774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 43380549 - 43380595
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||    
T  43380549 aaaatcaaaactgatccaaattacagggacgattatcatatttaagc 43380595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 51465806 - 51465752
Alignment:
Q  71 cagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||||| ||||||||||||||  ||||||||| |||| ||||||||||||||||    
T  51465806 cagggacgaaaatcaaaactgatccaaattacagggactattatcatatttaagc 51465752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 29373193 - 29373140
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    ||||| || |||||||| ||| ||||||||||||||| ||||||||||||||||    
T  29373193 acaggaacgaaaatcaatactaactcaaattacaagggcgattatcatatttaa 29373140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 39841270 - 39841323
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| |||||||||||||   ||||||||| |||||||||||||||||||    
T  39841270 acagggacgaaaatcaaaactggaccaaattacagggacgattatcatatttaa 39841323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 46046484 - 46046439
Alignment:
Q  80 aaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||    
T  46046484 aaatcaaaactgagccaaattacaacgacgattatcatatttaagc 46046439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 43379825 - 43379770
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||||| |  |||||||| ||||| |||||||||||||||    
T  43379825 acagggacgaaaatcaaaactgtcaaaaattacagggacgtttatcatatttaagc 43379770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 51994716 - 51994771
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||| |||| ||||||||||| ||||  |||||||||||||    
T  51994716 acagggacgaaaatcaaaattgacccaaattacaagtacgaacatcatatttaagc 51994771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 272822 - 272768
Alignment:
Q  71 cagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||||||| |||||||||| ||||||||| ||||||  | |||||||||||    
T  272822 cagggacaaaaaccaaaactgacccaaattacagggacgaagaacatatttaagc 272768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 1743262 - 1743209
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| ||||||||||||||   |||||| | |||||||||||||||||||    
T  1743262 acagggacgaaaatcaaaactgaactaaattatagggacgattatcatatttaa 1743209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 40366315 - 40366260
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  40366315 acagggacgaaaatcaaaactgacccaaattacagggacgattatcatatttaagc 40366260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 19432546 - 19432601
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||||||||||||||||||  ||||||||| | |||||||||||||||||||    
T  19432546 acagggacaaaaatcaaaactgaaccaaattacaggaacgattatcatatttaagc 19432601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 31558290 - 31558239
Alignment:
Q  74 ggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  31558290 ggacgaaaatcaaaactgactcaaattacagtgacgattatcatatttaagc 31558239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 16899965 - 16899910
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||||||   ||||||||| |||||||||||||||||||||    
T  16899965 acagggacgaaaatcaaaactggaccaaattacagggacgattatcatatttaagc 16899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 3098360 - 3098306
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaag 124  Q
    |||| ||| |||||||||||||||  |||||||| ||||||||||||||||||||    
T  3098360 acagagacgaaaatcaaaactgacctaaattacagggacgattatcatatttaag 3098306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 6895206 - 6895256
Alignment:
Q  73 gggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    ||||| |||||||||||||   |||||||||||||||||||||||||||||    
T  6895206 gggacgaaaatcaaaactggaccaaattacaaggacgattatcatatttaa 6895256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 3099092 - 3099147
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||| |||||||   ||||||||| |||||||||||||||||||||    
T  3099092 acagggacgaaaattaaaactggaccaaattacatggacgattatcatatttaagc 3099147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 3779485 - 3779540
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||| |   ||||||||| ||||||||||||||||||||||    
T  3779485 acagggacgaaaatcaaaatttgatcaaattactaggacgattatcatatttaagc 3779540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 29096883 - 29096830
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    ||||| ||||||||||||||||   ||||||||| |||||||| ||||||||||    
T  29096883 acaggaacaaaaatcaaaactggaccaaattacatggacgattttcatatttaa 29096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 29627134 - 29627187
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||  |||||||||||    
T  29627134 acagggacgaaaatcaaaacggacccaaattacaaggatgaaaatcatatttaa 29627187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 31559041 - 31559094
Alignment:
Q  72 agggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||| ||||||||||||| |  ||||||||  ||||||||||||||||||||    
T  31559041 agggacgaaaatcaaaactggccaaaattacagtgacgattatcatatttaagc 31559094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 39084317 - 39084370
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| |||||||||| || | ||||||| | |||||||||||||||||||    
T  39084317 acagggacgaaaatcaaaattggcccaaattagagggacgattatcatatttaa 39084370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 15994484 - 15994539
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  15994484 acagggacgaaaatcaaaactgactcaaattatatggacgattatcatatttaagc 15994539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 11735798 - 11735844
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||    
T  11735798 aaaatcaaaactgactcaaattacaaggacgaaaatcatatttaagc 11735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 2075727 - 2075674
Alignment:
Q  72 agggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||||||||||    
T  2075727 agggacgaaaatcaaaactgacctaaattacagggacgattatcatatttaagc 2075674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 914426 - 914381
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaag 124  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||    
T  914426 aaaatcaaaactgacctaaattacagggacgattatcatatttaag 914381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 3834982 - 3834927
Alignment:
Q  70 acagggacaaaaatcaaaact-gactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  3834982 acagggacgaaaatcaaaactagac-caaattacagggacgattatcatatttaagc 3834927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 16011421 - 16011366
Alignment:
Q  70 acagggacaaaaatcaaaactg-actcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  16011421 acagggacgaaaatcaaaactggact-aaattacaagaacgattatcatatttaagc 16011366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 5429105 - 5429050
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||||||  ||||||||| |||| ||| ||||||||||||    
T  5429105 acagggacgaaaatcaaaactgaaccaaattacagggacaattttcatatttaagc 5429050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 26882741 - 26882796
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||| ||| ||||||||| ||||||  |||||||||||||    
T  26882741 acagggacgaaaatcaaaacggacccaaattacatggacgaaaatcatatttaagc 26882796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 39233938 - 39233989
Alignment:
Q  74 ggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||| |||||||||| |||  ||||||||| |||||||||||||||||||||    
T  39233938 ggacgaaaatcaaaattgaaccaaattacagggacgattatcatatttaagc 39233989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 44075882 - 44075836
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||||||||   ||||||||| |||||||||||||||||||||    
T  44075882 aaaatcaaaactggaccaaattacagggacgattatcatatttaagc 44075836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 54295099 - 54295153
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaag 124  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  54295099 acagggacgaaaatcaaaactgacccaaattacatggacgattatcatatttaag 54295153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 42489286 - 42489338
Alignment:
Q  73 gggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  42489286 gggacgaaaatcaaaactgacccaaattacaaggacaattatcatatttaagc 42489338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 43656221 - 43656272
Alignment:
Q  74 ggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  43656221 ggacgaaaatcaaaactgtcccaaattacaaggacgattatcatatttaagc 43656272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 42488498 - 42488454
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  42488498 aaaatcaaaactgactcaaattacagggatgattatcatatttaa 42488454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 54280908 - 54280853
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||||||   ||||||||| |||||||||||||||||||||    
T  54280908 acagggacgaaaatcaaaactggaccaaattacagggacgattatcatatttaagc 54280853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 44706966 - 44706911
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||| ||| ||||||||| ||||||  |||||||||||||    
T  44706966 acagggacgaaaatcaaaacggacccaaattacagggacgaaaatcatatttaagc 44706911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 21102644 - 21102598
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||||||||||||||||||||||| ||| ||  |||||||||||||    
T  21102644 aaaatcaaaactgactcaaattacagggatgaaaatcatatttaagc 21102598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 37796651 - 37796598
Alignment:
Q  72 agggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  37796651 agggacgaaaatcaaaactgacccaaattacagggacgattatcatatttaagc 37796598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 14419445 - 14419392
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||||||||||    
T  14419445 acagggacgaaaatcaaaactgccccaaaatacagggacgattatcatatttaa 14419392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 17995905 - 17995850
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||| |||| ||||||||| ||||||  |||||||||||||    
T  17995905 acagggacgaaaatcaaaattgacccaaattacagggacgaaaatcatatttaagc 17995850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 32497056 - 32497001
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||  ||||||||||||||| ||||||||| | || ||||||||||||||||    
T  32497056 acagggatgaaaatcaaaactgacccaaattacaggaacaattatcatatttaagc 32497001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 40193916 - 40193861
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||| || |||||||||| |||| |||||||||  ||||||||||||||||||||    
T  40193916 acaggaacgaaaatcaaaattgacccaaattacagcgacgattatcatatttaagc 40193861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 789345 - 789299
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||||||||||||| ||||||||| ||||||  |||||||||||||    
T  789345 aaaatcaaaactgacccaaattacagggacgaaaatcatatttaagc 789299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 16779796 - 16779849
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| ||| ||||||| ||| |||||||||||||| | ||||||||||||    
T  16779796 acagggacgaaattcaaaaccgacccaaattacaaggactaatatcatatttaa 16779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 41345436 - 41345489
Alignment:
Q  72 agggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||| |||||||||||||   ||||||| | |||||||||||||||||||||    
T  41345436 agggacgaaaatcaaaactggaccaaattatagggacgattatcatatttaagc 41345489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 46468156 - 46468103
Alignment:
Q  71 cagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaag 124  Q
    ||||||||||||||||||| |||| |||||||| |||| |  ||||||||||||    
T  46468156 cagggacaaaaatcaaaacggacttaaattacatggacaaaaatcatatttaag 46468103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 7601712 - 7601767
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||    
T  7601712 acagggacgaaaatcaaaactggcccaaattacagggacgattatcatatttaagc 7601767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 39528919 - 39528864
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||||||||||||||||||| ||||||||| ||||||  |||||||||||||    
T  39528919 acagggacaaaaatcaaaactgacccaaattacagggacgaaaatcatatttaagc 39528864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 42093482 - 42093429
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  42093482 acagggacgaaaatcaaaactggttcaaattacagggacgattatcatatttaa 42093429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 30136721 - 30136776
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||||| ||||||||||| ||  |||||||||| |||||||||||||||||||||    
T  30136721 acagggataaaaatcaaaattggttcaaattacatggacgattatcatatttaagc 30136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 40784862 - 40784809
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| |||||||||||||   ||||||||| |||||||||||||||||||    
T  40784862 acagggacgaaaatcaaaactggaccaaattacagggacgattatcatatttaa 40784809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 30427132 - 30427081
Alignment:
Q  74 ggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||| ||||| ||||||||  ||||||||| |||||||||||||||||||||    
T  30427132 ggacgaaaataaaaactgaaccaaattacagggacgattatcatatttaagc 30427081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 14446062 - 14446108
Alignment:
Q  79 aaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||||| || | ||||||||| |||||||||||||||||||||    
T  14446062 aaaatcaaaattggcccaaattacagggacgattatcatatttaagc 14446108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 125
Target Start/End: Complemental strand, 43937356 - 43937326
Alignment:
Q  95 caaattacaaggacgattatcatatttaagc 125  Q
    |||||||||||||||||||||||||||||||    
T  43937356 caaattacaaggacgattatcatatttaagc 43937326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 865471 - 865416
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  865471 acagggacgaaaatcaaaactgacccaaattacagggatgattatcatatttaagc 865416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 54110486 - 54110539
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  54110486 acagggacgaaaatcaaaactgaaacaaattacagggacgattatcatatttaa 54110539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 51162915 - 51162970
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||||||||| ||| ||||||||||||||||  |||||||||||||    
T  51162915 acagggacgaaaatcaaaacggacccaaattacaaggacgaaaatcatatttaagc 51162970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 42712139 - 42712189
Alignment:
Q  72 agggacaaaaatcaaaactgactcaaattacaaggacgattatcatattta 122  Q
    ||||||||||||||||||||   |||||||||||||||| |||||||||||    
T  42712139 agggacaaaaatcaaaactggtccaaattacaaggacgactatcatattta 42712189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 29144852 - 29144907
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||| |   |||||||||| |||||||||||||||||||||    
T  29144852 acagggacgaaaatcaaaatttgatcaaattacagggacgattatcatatttaagc 29144907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 29517837 - 29517892
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||| |||  ||||||||| |||||||||||||||| ||||    
T  29517837 acagggacgaaaatcaaaattgaaccaaattacagggacgattatcatattaaagc 29517892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 44876121 - 44876066
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    ||||| || |||| |||||||||| ||||||||||| || ||||||||||||||||    
T  44876121 acaggaacgaaaagcaaaactgacccaaattacaagaacaattatcatatttaagc 44876066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 9170691 - 9170744
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaa 123  Q
    |||||||| |||||||||||||   |||| |||||| |||||||||||||||||    
T  9170691 acagggacgaaaatcaaaactggaccaaaatacaagaacgattatcatatttaa 9170744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 29145240 - 29145295
Alignment:
Q  70 acagggacaaaaatcaaaact-gactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| |||||||||| | ||| ||||||||| |||||||||||||||||||||    
T  29145240 acagggacgaaaatcaaaatttgac-caaattacagggacgattatcatatttaagc 29145295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 135539 - 135484
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||||||| ||||||| ||| ||||||||| |||| | ||||||||||||||    
T  135539 acagggacaaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 135484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 545188 - 545242
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||| ||||| |||||||||| |||||||| | |||||||||||||||||||    
T  545188 acagggacgaaaattaaaactgacttaaattacatg-acgattatcatatttaagc 545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 544395 - 544343
Alignment:
Q  70 acagggacaaaaatcaaaactgactcaaattacaaggacgattatcatattta 122  Q
    |||||||| |||||||||||||   |||||||||  |||||||||||||||||    
T  544395 acagggacgaaaatcaaaactggaccaaattacagagacgattatcatattta 544343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 1822988 - 1822940
Alignment:
Q  77 caaaaatcaaaactgactcaaattacaaggacgattatcatatttaagc 125  Q
    |||||||||||||||   |||||||||| ||| ||||||||||||||||    
T  1822988 caaaaatcaaaactggaccaaattacaaagacaattatcatatttaagc 1822940  T

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