View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2375_low_37 (Length: 248)
Name: NF2375_low_37
Description: NF2375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2375_low_37 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 37901317 - 37901097
Alignment:
| Q |
18 |
aggttcttgttcttgaggcttattaactggggttattagctttggaaacatgattgatagcactccacgttcaaacttggcactcacgtcattggtctca |
117 |
Q |
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| T |
37901317 |
aggttcttgttcttgaggcttattagctggggttattagctttggaaacatgattgatagcactccacgttcaaacttggcactcacgtcattggtttca |
37901218 |
T |
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| Q |
118 |
caatatggaggaattggaaattctttgccaaaacgatgccatatattctcaatcccttgtctttcacaattgatccttaggacaccttttgaagtcactt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37901217 |
caatatggaggaattggaaattctttgccaaaacgatgccatatattctcaatcccttgtctttcacaattgatccttaggacaccttttgaagtcactt |
37901118 |
T |
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| Q |
218 |
gcactctcaattgttcctttg |
238 |
Q |
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||||||||||||||||||||| |
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| T |
37901117 |
gcactctcaattgttcctttg |
37901097 |
T |
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