View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2376_low_6 (Length: 322)

Name: NF2376_low_6
Description: NF2376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2376_low_6
NF2376_low_6
[»] chr6 (1 HSPs)
chr6 (13-306)||(31267942-31268235)


Alignment Details
Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 13 - 306
Target Start/End: Original strand, 31267942 - 31268235
Alignment:
Q  13 aatatactagaccaatgaagctagtccttaaaattcataatgtaatgtgcaactcctatagttaacgttcaacttcatttatttattttnnnnnnnttga 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||    
T  31267942 aatatactagaccaatgaagctagaccttaaaattcataatgtaatgtgcaactcctatagttaacgttcaacttcatttatttattttaaaaaaattga 31268041  T
Q  113 tggcacattgtggtaggaactatttgaagcaaaaaatgttgaatatgcttagattcctaagattatataataaaattagagaaattttgcacttgaagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31268042 tggcacattgtggtaggaactatttgaagcaaaaaatgttgaatatgcttagattcctaagattatataataaaattagagaaattttgcaattgaagta 31268141  T
Q  213 aaatttgaaaacttgttattattggattcaagacacatgattatacaatagtggcattgccaaaaacacaagaatcctttgtaatacatgaaat 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31268142 aaatttgaaaacttgttattattggattcaagacacatgattatacaatagtggcattgccaaaaacacaagaatcctttgtaatacatgaaat 31268235  T

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