View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2376_low_7 (Length: 246)
Name: NF2376_low_7
Description: NF2376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2376_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 27079887 - 27080109
Alignment:
| Q |
1 |
cgttaaaagatttaccatagttatcaaaatcaacatgggtcccacccgttgagtccttagcataggaactaaacgagtcagcaccaacattggcttgatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| |
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| T |
27079887 |
cgttaaaagatttaccatagttatcaaaatcaacatgggtcccacccgttgagtccttagcataggaagtaaacgagtcggcacccacattggcttgatc |
27079986 |
T |
|
| Q |
101 |
tctatagtttgagaatttttcagcagcacctaaacttccacttgcataatttttgaaattttctgttggattattcatattaacaccgtaattaacaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27079987 |
tctatagtttgagaatttttcagcagcacctaaacttccacttgcataatttttgaaattttctgttggattattcatattaacaccgtaattaacaaac |
27080086 |
T |
|
| Q |
201 |
gtgtctttattacctgtaccttg |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
27080087 |
gtgtctttattacctgtaccttg |
27080109 |
T |
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