View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2377_high_2 (Length: 361)

Name: NF2377_high_2
Description: NF2377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2377_high_2
NF2377_high_2
[»] chr6 (70 HSPs)
chr6 (11-343)||(26802201-26802536)
chr6 (12-346)||(27724935-27725267)
chr6 (11-346)||(27718469-27718803)
chr6 (22-348)||(27698582-27698906)
chr6 (31-346)||(27611092-27611406)
chr6 (11-343)||(28780902-28781233)
chr6 (11-334)||(28786041-28786363)
chr6 (11-346)||(27604795-27605135)
chr6 (11-348)||(27228997-27229331)
chr6 (33-334)||(28792184-28792484)
chr6 (11-348)||(26655752-26656088)
chr6 (11-348)||(26761723-26762059)
chr6 (85-346)||(27593110-27593371)
chr6 (85-348)||(27678782-27679045)
chr6 (111-348)||(26884025-26884262)
chr6 (71-348)||(27338153-27338430)
chr6 (71-348)||(27398893-27399170)
chr6 (131-348)||(27531285-27531502)
chr6 (104-344)||(26646334-26646574)
chr6 (104-344)||(26752302-26752542)
chr6 (85-348)||(27677702-27677965)
chr6 (85-343)||(31284124-31284382)
chr6 (85-348)||(27706490-27706753)
chr6 (11-348)||(26823609-26823939)
chr6 (79-348)||(26622806-26623075)
chr6 (79-348)||(26728784-26729053)
chr6 (143-348)||(25579613-25579818)
chr6 (87-348)||(26861454-26861715)
chr6 (143-348)||(25481636-25481841)
chr6 (143-348)||(26142759-26142964)
chr6 (143-348)||(25538434-25538639)
chr6 (143-348)||(26055820-26056025)
chr6 (143-348)||(26075790-26075995)
chr6 (143-348)||(26048739-26048944)
chr6 (143-348)||(26069908-26070113)
chr6 (126-348)||(28234441-28234663)
chr6 (16-247)||(27427792-27428020)
chr6 (111-346)||(28325343-28325578)
chr6 (105-348)||(28185222-28185465)
chr6 (114-348)||(28226815-28227049)
chr6 (105-348)||(28180970-28181213)
chr6 (147-348)||(28242702-28242903)
chr6 (253-343)||(25507002-25507092)
chr6 (81-346)||(28139373-28139638)
chr6 (103-345)||(28098460-28098702)
chr6 (180-304)||(29825958-29826082)
chr6 (126-344)||(26893563-26893781)
chr6 (109-348)||(26936954-26937193)
chr6 (144-298)||(26635585-26635739)
chr6 (144-298)||(26741551-26741705)
chr6 (144-298)||(26848555-26848709)
chr6 (113-346)||(26342024-26342257)
chr6 (223-348)||(28149912-28150036)
chr6 (144-308)||(25071554-25071718)
chr6 (168-308)||(26949580-26949720)
chr6 (144-272)||(27214312-27214440)
chr6 (144-272)||(27234788-27234916)
chr6 (189-274)||(26617266-26617351)
chr6 (189-274)||(26723194-26723279)
chr6 (153-274)||(26959069-26959190)
chr6 (144-281)||(27665272-27665409)
chr6 (111-348)||(28297801-28298038)
chr6 (111-348)||(28514035-28514272)
chr6 (193-296)||(26811453-26811556)
chr6 (11-43)||(27338450-27338482)
chr6 (11-43)||(27399190-27399222)
chr6 (212-296)||(28491660-28491744)
chr6 (212-296)||(29804070-29804154)
chr6 (219-298)||(29467797-29467876)
chr6 (168-298)||(26974971-26975101)
[»] scaffold0349 (3 HSPs)
scaffold0349 (12-348)||(3509-3844)
scaffold0349 (22-339)||(14452-14767)
scaffold0349 (11-176)||(8061-8225)
[»] scaffold0277 (2 HSPs)
scaffold0277 (11-343)||(13725-14056)
scaffold0277 (11-346)||(4761-5100)
[»] scaffold1254 (1 HSPs)
scaffold1254 (11-343)||(10-334)
[»] scaffold0419 (1 HSPs)
scaffold0419 (11-343)||(7295-7619)
[»] chr4 (8 HSPs)
chr4 (13-348)||(18699475-18699807)
chr4 (11-348)||(18731579-18731913)
chr4 (11-348)||(18655552-18655886)
chr4 (11-348)||(18679642-18679976)
chr4 (79-348)||(18724160-18724429)
chr4 (16-247)||(17989226-17989454)
chr4 (16-247)||(18073535-18073763)
chr4 (153-303)||(5091087-5091237)
[»] chr1 (3 HSPs)
chr1 (65-348)||(28164437-28164720)
chr1 (85-348)||(268432-268695)
chr1 (111-348)||(28127754-28127992)
[»] chr8 (2 HSPs)
chr8 (85-348)||(29273858-29274121)
chr8 (125-280)||(31903727-31903882)
[»] scaffold0038 (4 HSPs)
scaffold0038 (126-348)||(34602-34824)
scaffold0038 (111-346)||(116658-116893)
scaffold0038 (114-348)||(27313-27547)
scaffold0038 (147-348)||(42864-43065)
[»] scaffold0003 (1 HSPs)
scaffold0003 (16-247)||(59343-59571)
[»] scaffold0019 (1 HSPs)
scaffold0019 (111-348)||(58370-58607)
[»] chr2 (2 HSPs)
chr2 (123-344)||(3279562-3279783)
chr2 (87-308)||(17993812-17994033)
[»] chr5 (1 HSPs)
chr5 (182-298)||(16688944-16689060)


Alignment Details
Target: chr6 (Bit Score: 301; Significance: 1e-169; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 26802201 - 26802536
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnn---catccaatttctcacaattttcatggctatgcagtctccttcc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||    
T  26802201 cacagaccacaaaaacttactcattcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgcagtctccttcc 26802300  T
Q  108 tcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802301 tcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctc 26802400  T
Q  208 ttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802401 ttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaat 26802500  T
Q  308 ttttattcctgtgttttctatcaactatgcctcttc 343  Q
    ||||||||||||||||||||||||||||||||||||    
T  26802501 ttttattcctgtgttttctatcaactatgcctcttc 26802536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 12 - 346
Target Start/End: Complemental strand, 27725267 - 27724935
Alignment:
Q  12 acagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcat 111  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || ||||||||||    
T  27725267 acagaccacaaaaatttac-cattcatattctgcattctcaaactctttttt-catcctatttctctcaattgtcatggctatacaatcaccttcctcat 27725170  T
Q  112 cctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttat 211  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||||||||||||||||     
T  27725169 cctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttac 27725070  T
Q  212 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  27725069 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggattttt 27724970  T
Q  312 attcctgtgttttctatcaactatgcctcttcttc 346  Q
    |||||||||||||||||||||||||||| ||||||    
T  27724969 attcctgtgttttctatcaactatgcctattcttc 27724935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 27718803 - 27718469
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || |||||||||    
T  27718803 cacagaacacaaaaattcactcattcatattctgcattctcaaactctttttt-catcctatttctctcaattctcatggctatacaatcaccttcctca 27718705  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||||||||||||    
T  27718704 tcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctctta 27718605  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  27718604 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttt 27718505  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttc 346  Q
    ||||||||||||||||||||||||||||||||||||    
T  27718504 tattcctgtgttttctatcaactatgcctcttcttc 27718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 22 - 348
Target Start/End: Complemental strand, 27698906 - 27698582
Alignment:
Q  22 aaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcatt 121  Q
    |||| |||||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || |||||||||||| |||||||    
T  27698906 aaaatttactcattcatattctgcattctcaaactcttttt--catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcatt 27698809  T
Q  122 ttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaaggga 221  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  27698808 ttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaaggga 27698709  T
Q  222 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  27698708 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 27698609  T
Q  322 tttctatcaactatgcctcttcttcat 348  Q
    ||||| |||||||||| ||||||||||    
T  27698608 tttctctcaactatgcatcttcttcat 27698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 31 - 346
Target Start/End: Complemental strand, 27611406 - 27611092
Alignment:
Q  31 tcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatgg 130  Q
    |||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||||| |   ||||||| || ||||||||||| |||||    
T  27611406 tcattcatattctgcattctcaaactctttttt-catccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatgg 27611308  T
Q  131 attcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccatacc 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  27611307 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 27611208  T
Q  231 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatca 330  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27611207 ttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatca 27611108  T
Q  331 actatgcctcttcttc 346  Q
    ||||||||||||||||    
T  27611107 actatgcctcttcttc 27611092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 28780902 - 28781233
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||       ||||||||||||| ||||| ||||||||||||| |  ||||||||     
T  28780902 cacagaccacaaaaacaaactcattcatattctgaattctcaaactctttttt-catccaatttctctcaattatcatggctatgcaattaccttcctct 28781000  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  28781001 tcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctctta 28781100  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  28781101 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 28781200  T
Q  311 tattcctgtgttttctatcaactatgcctcttc 343  Q
    |||||||||||||||||||||||||||| ||||    
T  28781201 tattcctgtgttttctatcaactatgccacttc 28781233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 334
Target Start/End: Original strand, 28786041 - 28786363
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||       ||||||||||||| ||||| | |||||||| || || |||||||||    
T  28786041 cacagaccacaaaaacaaactcattcatattctgaattctcaaactctttttt-catccaatttctctcaattcttatggctatacaatcaccttcctca 28786139  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||||||||||||||    
T  28786140 tcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctctta 28786239  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  28786240 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 28786339  T
Q  311 tattcctgtgttttctatcaacta 334  Q
    ||||||||||||||||||||||||    
T  28786340 tattcctgtgttttctatcaacta 28786363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 27605135 - 27604795
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||| ||||||||||||| |  |||||||||    
T  27605135 cacagaccacaaaaacttactcattcatattctgcattctcaaactctttttt-catccaatttctctcaattctcatggctatgcaattaccttcctca 27605037  T
Q  111 tcctc------ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaagg 204  Q
    |||||      ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  27605036 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 27604937  T
Q  205 ctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 304  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||  ||||||||||||| ||||| ||    
T  27604936 ctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccag 27604837  T
Q  305 aatttttattcctgtgttttctatcaactatgcctcttcttc 346  Q
     |||||||||||||||||||||||||| ||||||||||||||    
T  27604836 gatttttattcctgtgttttctatcaaatatgcctcttcttc 27604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 348
Target Start/End: Original strand, 27228997 - 27229331
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||       ||||||||||||| ||| | |||||||||| || || ||||||||     
T  27228997 cacataccacaaaaacatactcattcatattctgcattctaaaactctttt---catccaatttctctcaagtctcatggctatacaatcaccttcctct 27229093  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  27229094 tcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctctta 27229193  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| | |||||    
T  27229194 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttt 27229293  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||  | ||||||  ||||||||| ||||||||||    
T  27229294 tattcccatattttctgccaactatgcatcttcttcat 27229331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 33 - 334
Target Start/End: Original strand, 28792184 - 28792484
Alignment:
Q  33 attcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggat 132  Q
    |||||||||||| ||||||||||||       ||||||||||||| ||||| | |||||||| || || ||||||||||||||||||||||| |||||||    
T  28792184 attcatattctgaattctcaaactctttttt-catccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggat 28792282  T
Q  133 tcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccatacctt 232  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||| ||||||||||||| | |||||    
T  28792283 tcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacctt 28792382  T
Q  233 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaac 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  28792383 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaac 28792482  T
Q  333 ta 334  Q
    ||    
T  28792483 ta 28792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 348
Target Start/End: Original strand, 26655752 - 26656088
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||       |||||| |||||| ||||| |||||||||| || || |||||||||    
T  26655752 cacagaccacaaaaacttactcattcatattctgcattcccaaactctttttt-catccattttctctcaattctcatggctatacaatcaccttcctca 26655850  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||||| || |  |||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||    
T  26655851 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctta 26655950  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
    |||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||| || |||||    
T  26655951 ttgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttt 26656050  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||  | ||||||  ||||||||| ||||||||||    
T  26656051 tattcccatattttctgccaactatgcatcttcttcat 26656088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 348
Target Start/End: Original strand, 26761723 - 26762059
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||       |||||| |||||| ||||| |||||||||| || || |||||||||    
T  26761723 cacagaccacaaaaacttactcattcatattctgcattcccaaactctttttt-catccattttctctcaattctcatggctatacaatcaccttcctca 26761821  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||||| || |  |||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||    
T  26761822 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctta 26761921  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
    |||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||| || |||||    
T  26761922 ttgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttt 26762021  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||  | ||||||  ||||||||| ||||||||||    
T  26762022 tattcccatattttctgccaactatgcatcttcttcat 26762059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 85 - 346
Target Start/End: Complemental strand, 27593371 - 27593110
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || || | ||||||||||||||||||    
T  27593371 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 27593272  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||    
T  27593271 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 27593172  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttc 346  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27593171 aaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27593110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 85 - 348
Target Start/End: Original strand, 27678782 - 27679045
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || || | ||||||||||||||||||    
T  27678782 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 27678881  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || || ||||||||||||||||||| ||||||||||||| | |||||||||||| | |||| |||||||||||||||||||||||||||||||||  ||    
T  27678882 caccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctc 27678981  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27678982 aaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 27679045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 111 - 348
Target Start/End: Original strand, 26884025 - 26884262
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || || | |||||||||||| ||||| || || |||||||||||||||||||    
T  26884025 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 26884124  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     | ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  26884125 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 26884224  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||  | ||||||| ||||||||| ||||||||||    
T  26884225 tattccaatattttctaccaactatgcatcttcttcat 26884262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 71 - 348
Target Start/End: Complemental strand, 27338430 - 27338153
Alignment:
Q  71 atttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgac 170  Q
    ||||||| ||||| ||||||||||||| || | |||||| ||||||||| |||| | ||| ||||  ||||| ||||||||||||||||||| || ||||    
T  27338430 atttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgac 27338331  T
Q  171 actcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatca 270  Q
    ||||  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||| ||    
T  27338330 actctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagca 27338231  T
Q  271 caccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||||||  |||||||||||||||| ||||| ||||| |||||  | ||||||   |||||||| ||||||||||    
T  27338230 caccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcat 27338153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 71 - 348
Target Start/End: Complemental strand, 27399170 - 27398893
Alignment:
Q  71 atttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgac 170  Q
    ||||||| ||||| ||||||||||||| || | |||||| ||||||||| |||| | ||| ||||  ||||| ||||||||||||||||||| || ||||    
T  27399170 atttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgac 27399071  T
Q  171 actcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatca 270  Q
    ||||  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||| ||    
T  27399070 actctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagca 27398971  T
Q  271 caccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||||||  |||||||||||||||| ||||| ||||| |||||  | ||||||   |||||||| ||||||||||    
T  27398970 caccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcat 27398893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 131 - 348
Target Start/End: Complemental strand, 27531502 - 27531285
Alignment:
Q  131 attcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccatacc 230  Q
    |||||||||||||||||||||||||||||||||| | ||||||||  |||||||||| || ||||||||||||||||||| ||||||||||||| |||||    
T  27531502 attcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatacc 27531403  T
Q  231 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatca 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||| ||||||| ||||||||||| || ||||||   |    
T  27531402 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaa 27531303  T
Q  331 actatgcctcttcttcat 348  Q
    ||||||| ||||||||||    
T  27531302 actatgcatcttcttcat 27531285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 104 - 344
Target Start/End: Original strand, 26646334 - 26646574
Alignment:
Q  104 ttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaag 203  Q
    |||||| ||||||| | |||| || |||||||| ||||| || |||||||  || ||||||| |||||||||  |||||||||| ||  |||||||||||    
T  26646334 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26646433  T
Q  204 gctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 303  Q
    ||||||| |||||||||||| || ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26646434 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 26646533  T
Q  304 gaatttttattcctgtgttttctatcaactatgcctcttct 344  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  26646534 ggatttttattcctgtgttttctatcaactatgcctcttct 26646574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 104 - 344
Target Start/End: Original strand, 26752302 - 26752542
Alignment:
Q  104 ttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaag 203  Q
    |||||| ||||||| | |||| || |||||||| ||||| || |||||||  || ||||||| |||||||||  |||||||||| ||  |||||||||||    
T  26752302 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26752401  T
Q  204 gctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 303  Q
    ||||||| |||||||||||| || ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26752402 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 26752501  T
Q  304 gaatttttattcctgtgttttctatcaactatgcctcttct 344  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  26752502 ggatttttattcctgtgttttctatcaactatgcctcttct 26752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 85 - 348
Target Start/End: Complemental strand, 27677965 - 27677702
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||| ||||| |||| ||||  | ||  |||||||| ||||||| ||| || || | ||||||||||||||||||    
T  27677965 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggttt 27677866  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || |||||||||||||||||||||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||  ||    
T  27677865 caccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 27677766  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  27677765 aaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcat 27677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 85 - 343
Target Start/End: Original strand, 31284124 - 31284382
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| ||  ||||||| ||||||||| |||| |||| |||||  |||||||| ||||| ||||| ||||| | |||||||||||| |||||    
T  31284124 tcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggttt 31284223  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||| ||||||||||| |||||||||||||||||||||  |    
T  31284224 caccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgac 31284323  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttc 343  Q
    || ||||||||||| ||||| |||||||| || |||||||||  |||||||||||||||    
T  31284324 aatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttc 31284382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 85 - 348
Target Start/End: Complemental strand, 27706753 - 27706490
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||| ||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || ||   ||||||||||||||||||    
T  27706753 tcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggttt 27706654  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || |||||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||| | ||||||||||||||||||||  ||    
T  27706653 cacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctc 27706554  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  27706553 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 27706490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 11 - 348
Target Start/End: Original strand, 26823609 - 26823939
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||  ||| ||||||||||||||||||||||||||||||       | ||||||||||| ||||| ||||||||||||||||  |||||||     
T  26823609 cacacaccacagtaacatactcattcatattctgcattctcaaactctttctt-cgtccaatttctctcaattctcatggctatgcagtcaacttcctc- 26823706  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
         |||| |||| ||||  ||||  ||||||||||| ||||||||||| ||| ||||||||||||| |  ||||| ||||||||||||||||||||||    
T  26823707 -----ttcagtttcatatgatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctctta 26823801  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
      |||||||||||||| |||||  |||||||   ||| ||||||||||| ||| |||||  || ||||||||  || ||||||||||| ||||| |||||    
T  26823802 cagacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttt 26823901  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  26823902 tattcctgtgttttctgccaactatgcctcttcttcat 26823939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 79 - 348
Target Start/End: Original strand, 26622806 - 26623075
Alignment:
Q  79 caattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggta 178  Q
    ||||| ||||||||||||| || || ||||| ||||||||| |||| |||  |||||  |||||||||||||| ||||| || |||| ||||||||||||    
T  26622806 caattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggta 26622905  T
Q  179 cggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 278  Q
    |||||| || || ||||||||||||||||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| |||||||    
T  26622906 cggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatca 26623005  T
Q  279 ctcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||   ||| || || ||||| ||||| |||||||||||||||||||||  ||||||||| | ||||||||    
T  26623006 cttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcat 26623075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 79 - 348
Target Start/End: Original strand, 26728784 - 26729053
Alignment:
Q  79 caattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggta 178  Q
    ||||| ||||||||||||| || || ||||| ||||||||| |||| |||  |||||  |||||||||||||| ||||| || |||| ||||||||||||    
T  26728784 caattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggta 26728883  T
Q  179 cggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 278  Q
    |||||| || || ||||||||||||||||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| |||||||    
T  26728884 cggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatca 26728983  T
Q  279 ctcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||   ||| || || ||||| ||||| |||||||||||||||||||||  ||||||||| | ||||||||    
T  26728984 cttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcat 26729053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 143 - 348
Target Start/End: Original strand, 25579613 - 25579818
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| || |||| |||||||||  ||  |||||| || |||||||| ||||||||| ||||||||||||| | ||||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 25579812  T
Q  343 cttcat 348  Q
    ||||||    
T  25579813 cttcat 25579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 87 - 348
Target Start/End: Original strand, 26861454 - 26861715
Alignment:
Q  87 atggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggtttta 186  Q
    ||||||||||| || |||| ||| ||||||||  |||| ||||||||||  ||||| || ||||||||||| || || | |||||||||||| |||||||    
T  26861454 atggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggtttta 26861553  T
Q  187 cgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaa 286  Q
    | || ||||||||||||||||||| |||||||||||| || |||||||| |||||   ||| ||||||||||| |||||||||| |  |||||||  |||    
T  26861554 ccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaa 26861653  T
Q  287 ggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
     ||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||| ||||    
T  26861654 tgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcat 26861715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 143 - 348
Target Start/End: Original strand, 25481636 - 25481841
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| ||||||||| ||||||||||||| | ||| |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||  | ||||||  ||||||||| ||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatctt 25481835  T
Q  343 cttcat 348  Q
    ||||||    
T  25481836 cttcat 25481841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 143 - 348
Target Start/End: Original strand, 26142759 - 26142964
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| ||||||||| ||||||||||||| | ||| |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 26142958  T
Q  343 cttcat 348  Q
    ||||||    
T  26142959 cttcat 26142964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 143 - 348
Target Start/End: Original strand, 25538434 - 25538639
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| ||||||||| |||||||||||||   ||| ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||  | ||||||  ||||||||| ||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatctt 25538633  T
Q  343 cttcat 348  Q
    ||||||    
T  25538634 cttcat 25538639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 143 - 348
Target Start/End: Original strand, 26055820 - 26056025
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| ||||||||| |||||||||||||  |||| |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| | |||||||||||  | ||||||  ||||||||| ||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26056019  T
Q  343 cttcat 348  Q
    ||||||    
T  26056020 cttcat 26056025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 143 - 348
Target Start/End: Original strand, 26075790 - 26075995
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| ||||||||| |||||||||||||  |||| |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| | |||||||||||  | ||||||  ||||||||| ||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26075989  T
Q  343 cttcat 348  Q
    ||||||    
T  26075990 cttcat 26075995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 143 - 348
Target Start/End: Original strand, 26048739 - 26048944
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| ||||||||||||||   ||| |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| ||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26048938  T
Q  343 cttcat 348  Q
    ||||||    
T  26048939 cttcat 26048944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 143 - 348
Target Start/End: Original strand, 26069908 - 26070113
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| ||||||||||||||   ||| |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| ||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26070107  T
Q  343 cttcat 348  Q
    ||||||    
T  26070108 cttcat 26070113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 348
Target Start/End: Original strand, 28234441 - 28234663
Alignment:
Q  126 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatcc 225  Q
    ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| |  |||||||| |  ||||||  | ||||||||||||    
T  28234441 tatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatcc 28234540  T
Q  226 ataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttc 325  Q
    | ||||||||||||||||  || |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || ||    
T  28234541 acaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtc 28234640  T
Q  326 tatcaactatgcctcttcttcat 348  Q
    |||||| ||||| ||||||||||    
T  28234641 tatcaattatgcttcttcttcat 28234663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 27428020 - 27427792
Alignment:
Q  16 accacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctc 115  Q
    ||||||||||| | ||||||||||||||||||||||||||||       ||||  ||||||| ||||| ||||||| ||||| |  |||| ||  |||||    
T  27428020 accacaaaaacatcctcattcatattctgcattctcaaactcttct---catcttatttctctcaattctcatggccatgcaattacctttctattcctc 27427924  T
Q  116 ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgac 215  Q
    ||||||||| |||| ||||| |||| | |||||||||| || || |||||| ||||||||||||||||| || ||||||||||  |||||||||||||||    
T  27427923 ttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgac 27427824  T
Q  216 aagggaatccataccttcattgatgacaatga 247  Q
    |||||||| | |||||||  ||||||| ||||    
T  27427823 aagggaattcgtaccttccatgatgacgatga 27427792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 111 - 346
Target Start/End: Original strand, 28325343 - 28325578
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| ||||| ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  |||||||||||||||| ||||| |||||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 28325542  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttc 346  Q
     |||||| | || |||||||| ||||| ||||||||    
T  28325543 cattcctattttgtctatcaattatgcttcttcttc 28325578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 105 - 348
Target Start/End: Original strand, 28185222 - 28185465
Alignment:
Q  105 tcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaagg 204  Q
    |||||||||||||| || || ||||||||||| ||  | |||||||| || ||||| || | ||||||||| ||  ||||||| || |||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  205 ctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 304  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  |||||||||||||||| |||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28185421  T
Q  305 aatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
     ||||| ||||| || || |||||||| ||||| ||||||||||    
T  28185422 gattttcattcccgtcttgtctatcaattatgcttcttcttcat 28185465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 348
Target Start/End: Original strand, 28226815 - 28227049
Alignment:
Q  114 tcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattg 213  Q
    ||||| || |||||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||  | ||||  |     
T  28226815 tcttccttctcttatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgta 28226914  T
Q  214 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 313  Q
    | |||||||| || || ||| ||||||| |  || |||||| |||| |||||||| ||| |||||||  |||||| ||||||||||||||| ||||| ||    
T  28226915 agaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcat 28227014  T
Q  314 tcctgtgttttctatcaactatgcctcttcttcat 348  Q
    |||||| || |||||||| ||||| ||||||||||    
T  28227015 tcctgtcttgtctatcaattatgcttcttcttcat 28227049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 105 - 348
Target Start/End: Original strand, 28180970 - 28181213
Alignment:
Q  105 tcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaagg 204  Q
    |||||||||||||| || || ||||||||||| ||  | | |||||| || ||||| ||   ||||||||| || |||||||| || |||||| | |  |    
T  28180970 tcctcatcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagag 28181069  T
Q  205 ctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 304  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  |||||||||||||||| |||||    
T  28181070 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28181169  T
Q  305 aatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
     ||||| ||||| || || |||||||| ||||| ||||||||||    
T  28181170 gattttcattcccgtcttgtctatcaattatgcttcttcttcat 28181213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 348
Target Start/End: Original strand, 28242702 - 28242903
Alignment:
Q  147 ttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatg 246  Q
    ||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  247 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttc 346  Q
    | |||| | |||| ||  |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || |||||||| ||||| ||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28242901  T
Q  347 at 348  Q
    ||    
T  28242902 at 28242903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 25507092 - 25507002
Alignment:
Q  253 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttc 343  Q
    |||||||||||||||||||||||||| || |||  ||||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||    
T  25507092 aaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttc 25507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 346
Target Start/End: Original strand, 28139373 - 28139638
Alignment:
Q  81 attttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacg 180  Q
    |||||||||||| ||||  | ||||| || ||  |||| || || ||||| ||||| ||| | || || ||||| || || |||| ||||||||| | ||    
T  28139373 attttcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcg 28139472  T
Q  181 gttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 280  Q
    |||| || || ||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| || |||||  |||| |||||    
T  28139473 gtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcact 28139572  T
Q  281 catcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttc 346  Q
    | | || ||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||    
T  28139573 cgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttc 28139638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 28098702 - 28098460
Alignment:
Q  103 cttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaa 202  Q
    ||||||| | ||||||||| |||||||||||||| ||  | ||||| || | |||||||||||| ||||||||||| |||||||| || |||||||||||    
T  28098702 cttcctctttctcttcattctcttatggattcacctatgacgtgtttcttaattttaggggcaccgacactcggtatggttttactggaaatctctacaa 28098603  T
Q  203 ggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 302  Q
     ||||||  ||||   ||| |||  |||||||||||  | || ||||||||   ||| |||  |||||||| ||| ||  |||||||||| ||||| ||     
T  28098602 agctctttgtgacggaggagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaatcacacaatcccttgtcaaggccatcgaagagtcc 28098503  T
Q  303 agaatttttattcctgtgttttctatcaactatgcctcttctt 345  Q
    || ||||| ||||| || || ||||  |||||||| |||||||    
T  28098502 aggattttaattccggtcttctctaagaactatgcttcttctt 28098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 29825958 - 29826082
Alignment:
Q  180 ggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 279  Q
    |||||||| |||||||||||||| ||||| | |||||||  ||| |  ||||||||||||||||| || ||||||||||| || ||||||||||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  280 tcatcaaggccattgaagaatctag 304  Q
    |  | ||||| ||| ||||||||||    
T  29826058 ttgtgaaggcaattcaagaatctag 29826082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 126 - 344
Target Start/End: Complemental strand, 26893781 - 26893563
Alignment:
Q  126 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatcc 225  Q
    ||||||||||| ||| | || ||||||| |||||| ||| |||||||||| |  |||||||||||  |||| || || ||||||  ||| |  ||||| |    
T  26893781 tatggattcacctacgatgtcttcctcaattttagaggctctgacactcgttttggttttacgggtcatctttataaagctctttgtgatagtggaattc 26893682  T
Q  226 ataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttc 325  Q
    | |||||||||||||| |  || ||||| ||||| || |||||| |||||||||| |||||||| |||||||| ||||  || |  ||||| ||  | ||    
T  26893681 acaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctc 26893582  T
Q  326 tatcaactatgcctcttct 344  Q
    |||||||||||| ||||||    
T  26893581 tatcaactatgcttcttct 26893563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 348
Target Start/End: Original strand, 26936954 - 26937193
Alignment:
Q  109 catcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctct 208  Q
    |||| ||||| || |||||||||||||| ||  | |||||||||||||| || ||||| |||||||| | |  |||||  ||  |||| ||||| |||||    
T  26936954 catcatcttccttctcttatggattcacctatgacgtgttcctcagtttcagaggcaccgacactcgcttccattttattggtcatctttacaaagctct 26937053  T
Q  209 tattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 308  Q
    |  |||    ||||| |  ||||||||||||||||| || || ||  ||||||| |||||||||||||||||  ||||||| |||||||| ||  | |||    
T  26937054 ttgtgattgtggaattcgcaccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggatt 26937153  T
Q  309 tttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
       || ||||| || ||||||||||||||| |||||||||    
T  26937154 gccatacctgtattctctatcaactatgccacttcttcat 26937193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 26635585 - 26635739
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| |||||||| |||||||  | |||||| || || || ||||| || ||||||  |||||| |||||| | ||||||||||||||||    
T  26635585 gtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgaca 26635684  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 298  Q
    | || ||| ||| ||| |||||||||||||| || ||| |||||  |||||||||    
T  26635685 aggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaaga 26635739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 26741551 - 26741705
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| |||||||| |||||||  | |||||| || || || ||||| || ||||||  |||||| |||||| | ||||||||||||||||    
T  26741551 gtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgaca 26741650  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 298  Q
    | || ||| ||| ||| |||||||||||||| || ||| |||||  |||||||||    
T  26741651 aggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaaga 26741705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 26848555 - 26848709
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| |||||||| |||||| | | | |||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  26848555 gtgttcattagtttcaggggcaccgacactagattcagtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgaca 26848654  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 298  Q
    | |||||||| || || ||||| |||||||| || ||| |||||  |||||||||    
T  26848655 aggatcttcagagtggtgatgagatcacaccttcgctcctcaagaacattgaaga 26848709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 346
Target Start/End: Complemental strand, 26342257 - 26342024
Alignment:
Q  113 ctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttatt 212  Q
    ||||||||| || ||||||||||| ||  | |||||||||| ||||||||||| || |||||| || |||||||| |||||| |||| |  |||||   |    
T  26342257 ctcttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctatggttttactggcaatatctatagagctctatgt 26342158  T
Q  213 gacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttta 312  Q
    |||   ||| |||  |||||||||||||| |  || |||||  |||| ||  ||||||||| ||||||  |||| ||||||||||| || || ||||| |    
T  26342157 gacggtggagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttca 26342058  T
Q  313 ttcctgtgttttctatcaactatgcctcttcttc 346  Q
    ||||  | || || ||||||||||| ||||||||    
T  26342057 ttccaattttctcaatcaactatgcttcttcttc 26342024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 348
Target Start/End: Original strand, 28149912 - 28150036
Alignment:
Q  223 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgtt 322  Q
    |||| |||||||||||||| |  || ||| || |||| || |||||||||||||||||| |||||||||||||||| || || ||||| |||||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  323 ttctatcaactatgcctcttcttcat 348  Q
     |||||||||||| | ||||||||||    
T  28150011 ctctatcaactatacttcttcttcat 28150036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 308
Target Start/End: Original strand, 25071554 - 25071718
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| ||||| || |||||||| | ||||||||| || ||||| || || ||||||  |||||| |||||||| ||||| ||||||||||    
T  25071554 gtgttcattagtttcaggggtaccgacactcgattcggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgaca 25071653  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 308  Q
    | || ||| | ||||| || ||||||||||| || |||  ||||  ||||||||| || ||||||    
T  25071654 aagagcttaagagaggtgacgaaatcacaccttcgctccgcaagagcattgaagattcgagaatt 25071718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 26949580 - 26949720
Alignment:
Q  168 gacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 267  Q
    |||||||| | |||||| || || |||||||| || |||||   ||||||||||||||  |||||||||||||| || || ||||| | ||| || ||||    
T  26949580 gacactcgattcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaa 26949679  T
Q  268 tcacaccatcactcatcaaggccattgaagaatctagaatt 308  Q
    ||||||| |||||| |||||   ||||||||||| ||||||    
T  26949680 tcacaccttcactcctcaagagaattgaagaatcgagaatt 26949720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 27214312 - 27214440
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| ||||| || ||||||||  ||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  27214312 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27214411  T
Q  244 atgatcttcaaagaggagatgaaatcaca 272  Q
    | || ||||| ||||| || |||||||||    
T  27214412 aggagcttcagagaggtgacgaaatcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 27234916 - 27234788
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| ||||| || ||||||||  ||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  27234916 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27234817  T
Q  244 atgatcttcaaagaggagatgaaatcaca 272  Q
    | || ||||| ||||| || |||||||||    
T  27234816 aggagcttcagagaggtgacgaaatcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 26617266 - 26617351
Alignment:
Q  189 ggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 274  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26617266 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 26723194 - 26723279
Alignment:
Q  189 ggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 274  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26723194 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 274
Target Start/End: Original strand, 26959069 - 26959190
Alignment:
Q  153 agttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttc 252  Q
    ||||| |||||||| |||||||| | | |||| || || || ||||| || ||||||  |||||| |||||| | ||||||||||||||||| || |||     
T  26959069 agtttcaggggcaccgacactcgattcagtttcaccggtaacctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagctta 26959168  T
Q  253 aaagaggagatgaaatcacacc 274  Q
    ||| ||| ||||||||||||||    
T  26959169 aaaaaggggatgaaatcacacc 26959190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 281
Target Start/End: Complemental strand, 27665409 - 27665272
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| ||||| || |||||||| |  ||||| || || || ||||| |||||||||  |||||| |||||||| ||||||||||||||||    
T  27665409 gtgttcattagtttcaggggtaccgacactcgatttggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatgaca 27665310  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactc 281  Q
    | || |||| ||  || || ||||||||||| ||||||    
T  27665309 aggagcttccaactggtgacgaaatcacaccttcactc 27665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 348
Target Start/End: Complemental strand, 28298038 - 28297801
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| || || |||||||||||| |  | || ||||| |||||||| || | |||||| || ||| ||||||  || |||||| |||| | ||||     
T  28298038 tcctcttccttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatcttt 28297939  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |   |||||||| |  ||||||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||  |||||||||  |||| |||||    
T  28297938 gtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggatttt 28297839  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
     |||||||| || |||| ||| ||||| ||||||||||    
T  28297838 cattcctgtcttatctaccaattatgcttcttcttcat 28297801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 348
Target Start/End: Original strand, 28514035 - 28514272
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| || || |||||||||||| |  | || ||||| |||||||| || | |||||| || ||| ||||||  || |||||| |||| | ||||     
T  28514035 tcctcttccttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatcttt 28514134  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |   |||||||| |  ||||||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||  |||||||||  |||| |||||    
T  28514135 gtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggatttt 28514234  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
     |||||||| || |||| ||| ||||| ||||||||||    
T  28514235 cattcctgtcttatctaccaattatgcttcttcttcat 28514272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 26811453 - 26811556
Alignment:
Q  193 atctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccat 292  Q
    ||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||||||||| || ||| |||||  |||    
T  26811453 atctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcacaccttcgctcctcaagagcat 26811552  T
Q  293 tgaa 296  Q
    ||||    
T  26811553 tgaa 26811556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 27338482 - 27338450
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattct 43  Q
    |||||||||||||||||||||||||||||||||    
T  27338482 cacagaccacaaaaacttactcattcatattct 27338450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 27399222 - 27399190
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattct 43  Q
    |||||||||||||||||||||||||||||||||    
T  27399222 cacagaccacaaaaacttactcattcatattct 27399190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 28491744 - 28491660
Alignment:
Q  212 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 296  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  28491744 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 28491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 29804154 - 29804070
Alignment:
Q  212 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 296  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  29804154 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 29804070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 29467797 - 29467876
Alignment:
Q  219 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 298  Q
    ||||| || |||||||| |||||  | || ||||||| ||| || ||||||||||||||||||||||| || ||||||||    
T  29467797 ggaattcacaccttcatggatgatgaagaacttcaaaaaggcgaagaaatcacaccatcactcatcaaagctattgaaga 29467876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 26974971 - 26975101
Alignment:
Q  168 gacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 267  Q
    |||||||| | |||||| || || || ||||| || ||||||  |||||| |||||| | | ||||||||||||||| || ||| ||| ||| || ||||    
T  26974971 gacactcgattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagcttaaaaaaggggacgaaa 26975070  T
Q  268 tcacaccatcactcatcaaggccattgaaga 298  Q
    ||||||| || ||| |||||  |||||||||    
T  26975071 tcacaccttcgctcctcaagagcattgaaga 26975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 232; Significance: 1e-128; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 12 - 348
Target Start/End: Complemental strand, 3844 - 3509
Alignment:
Q  12 acagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcat 111  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || ||||||||||    
T  3844 acagaccacaaaaatttac-cattcatattctgcattctcaaactctttttt-catcctatttctctcaattgtcatggctatacaatcaccttcctcat 3747  T
Q  112 cctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttat 211  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||||||||||||||||     
T  3746 cctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttac 3647  T
Q  212 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  3646 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggattttt 3547  T
Q  312 attcctgtgttttctatcaa-ctatgcctcttcttcat 348  Q
    |||||||||||||||||||| |||||||||||||||||    
T  3546 attcctgtgttttctatcaacctatgcctcttcttcat 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 22 - 339
Target Start/End: Complemental strand, 14767 - 14452
Alignment:
Q  22 aaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcatt 121  Q
    |||| |||||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || |||||||||||| |||||||    
T  14767 aaaatttactcattcatattctgcattctcaaactcttttt--catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcatt 14670  T
Q  122 ttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaaggga 221  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  14669 ttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaaggga 14570  T
Q  222 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  14569 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 14470  T
Q  322 tttctatcaactatgcct 339  Q
    ||||||||||||||||||    
T  14469 tttctatcaactatgcct 14452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 8225 - 8061
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || |||||||||    
T  8225 cacagaacacaaaaattcactcattcatattctgcattctcaaactctttttt-catcctatttctctcaattctcatggctatacaatcaccttcctca 8127  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcgg 176  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8126 tcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 215; Significance: 1e-118; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 11 - 343
Target Start/End: Complemental strand, 14056 - 13725
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||       ||||||||||||| ||||| ||||||||||||| |  ||||||||     
T  14056 cacagaccacaaaaacaaactcattcatattctgaattctcaaactctttttt-catccaatttctctcaattatcatggctatgcaattaccttcctct 13958  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  13957 tcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctctta 13858  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  13857 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 13758  T
Q  311 tattcctgtgttttctatcaactatgcctcttc 343  Q
    |||||||||||||||||||||||| ||| ||||    
T  13757 tattcctgtgttttctatcaactacgccacttc 13725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 5100 - 4761
Alignment:
Q  11 cacagaccacaaaaacttactcatt-----catattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctcctt 105  Q
    ||||||||||||||||||| |||||     ||||||||| ||||||||||||       ||||||||||||| ||||| | |||||||| || || ||||    
T  5100 cacagaccacaaaaacttattcattaaattcatattctgaattctcaaactctttttt-catccaatttctctcaattcttatggctatacaatcacctt 5002  T
Q  106 cctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggc 205  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||| || ||||||||||||||    
T  5001 cctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggc 4902  T
Q  206 tcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaga 305  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||||     
T  4901 tcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctagg 4802  T
Q  306 atttttattcctgtgttttctatcaactatgcctcttcttc 346  Q
    ||||||||||||||||||||||||  |||||||| ||||||    
T  4801 atttttattcctgtgttttctatcttctatgccttttcttc 4761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 343
Target Start/End: Complemental strand, 334 - 10
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||||||||||||||||||||||||||||||       |||||||       |||| |||||||| ||||| ||||||||||||| || ||| ||||     
T  334 cacagaccacaaaaacttactcattcatattct-------caaactctttttt-catctaatttctctcaattctcatggctatgcaatcacctccctct 243  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  242 tcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctctta 143  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  142 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 43  T
Q  311 tattcctgtgttttctatcaactatgcctcttc 343  Q
    |||||||||||||||||||||||| ||| ||||    
T  42 tattcctgtgttttctatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 7295 - 7619
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||||||||||||||||||||||||||||||       |||||||       |||| |||||||| ||||| ||||||||||||| || ||| ||||     
T  7295 cacagaccacaaaaacttactcattcatattct-------caaactctttttt-catctaatttctctcaattctcatggctatgcaatcacctccctct 7386  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  7387 tcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctctta 7486  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  7487 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 7586  T
Q  311 tattcctgtgttttctatcaactatgcctcttc 343  Q
    |||||||||||||||||||||||| ||| ||||    
T  7587 tattcctgtgttttctatcaactacgccacttc 7619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 13 - 348
Target Start/End: Complemental strand, 18699807 - 18699475
Alignment:
Q  13 cagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatc 112  Q
    |||||||||||||||||  |  |||||||||||||||||||||||       |||| | |||||| ||||| ||||||||||||| || |||||||||||    
T  18699807 cagaccacaaaaacttaacc--tcatattctgcattctcaaactctttttt-catctagtttctctcaattctcatggctatgcaatcaccttcctcatc 18699711  T
Q  113 ctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttatt 212  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||||||||  |||||||||| ||| |||||||||| ||||||| |    
T  18699710 ctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttact 18699611  T
Q  213 gacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttta 312  Q
    |||||||||||||| |||||||||||||||  ||| || ||||| || |||||||||| ||||||||||  ||| ||||||||||| ||||| || || |    
T  18699610 gacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttca 18699511  T
Q  313 ttcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||||||||||||||||||||||||||||||||    
T  18699510 ttcctgtgttttctatcaactatgcctcttcttcat 18699475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 11 - 348
Target Start/End: Complemental strand, 18731913 - 18731579
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||||||||||  |  |||||||||||||||||||||||       |||||| |||||| | ||||||||||||||||| || |||||||||    
T  18731913 cacataccacaaaaacttaaac--tcatattctgcattctcaaactctttttt-catccagtttctctcgattttcatggctatgcaatcaccttcctca 18731817  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||| |||||||||  |||||||    
T  18731816 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctctta 18731717  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| ||||| || ||    
T  18731716 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatctt 18731617  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
     |||||||||||||||||||||||||||||||||||||    
T  18731616 cattcctgtgttttctatcaactatgcctcttcttcat 18731579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 11 - 348
Target Start/End: Complemental strand, 18655886 - 18655552
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||||||||||  |  |||||||||||||||||||||||       |||||| |||||| ||||||||||||||| ||| || |||||||||    
T  18655886 cacataccacaaaaacttaaac--tcatattctgcattctcaaactctttttt-catccagtttctctcaattttcatggctaggcaatcaccttcctca 18655790  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||    
T  18655789 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctctta 18655690  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||||| |||||||||||||||  ||| || ||||| || |||||||||| ||||||||||  ||| |||||| |||| ||||| || ||    
T  18655689 ctgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 18655590  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18655589 tattcctgtgttttctatcaactatgcctcttcttcat 18655552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 11 - 348
Target Start/End: Complemental strand, 18679976 - 18679642
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||||||||||  |  |||||||||||||||||||||||       |||||| |||||| | ||||||||||||||||| || |||||||||    
T  18679976 cacataccacaaaaacttaaac--tcatattctgcattctcaaactctttttt-catccagtttctctctattttcatggctatgcaatcaccttcctca 18679880  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    | |||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||  ||||||||||||||||||    
T  18679879 ttctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctctta 18679780  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |||||| |||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| ||||| || ||    
T  18679779 ctgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatctt 18679680  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
     |||||||||||||||||||||||||||||||||||||    
T  18679679 cattcctgtgttttctatcaactatgcctcttcttcat 18679642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 79 - 348
Target Start/End: Complemental strand, 18724429 - 18724160
Alignment:
Q  79 caattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggta 178  Q
    ||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |    
T  18724429 caattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaa 18724330  T
Q  179 cggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 278  Q
    ||||||||| ||  |||||||||||||||||| ||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| |||||||    
T  18724329 cggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatca 18724230  T
Q  279 ctcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    |||  ||| ||||||||||| ||||| || || |||||||||||||||||||||||||||||||||||||    
T  18724229 ctcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcat 18724160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 17989454 - 17989226
Alignment:
Q  16 accacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctc 115  Q
    ||||||||||| | ||||||||||||||||||||||||||||       ||||  ||||||| ||||| ||||||| ||||| |  |||| ||  |||||    
T  17989454 accacaaaaacatcctcattcatattctgcattctcaaactcttct---catcttatttctctcaattctcatggccatgcaattacctttctattcctc 17989358  T
Q  116 ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgac 215  Q
    ||||||||| |||| ||||| |||| | |||||||||| || || |||||| ||||||||||||||||| || ||||||||||  |||||||||||||||    
T  17989357 ttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgac 17989258  T
Q  216 aagggaatccataccttcattgatgacaatga 247  Q
    |||||||| | |||||||  ||||||| ||||    
T  17989257 aagggaattcgtaccttccatgatgacgatga 17989226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 18073535 - 18073763
Alignment:
Q  16 accacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctc 115  Q
    ||||||||||| | ||||||||||||||||||||||||||||       ||||  ||||||| ||||| ||||||| ||||| |  |||| ||  |||||    
T  18073535 accacaaaaacatcctcattcatattctgcattctcaaactcttct---catcttatttctctcaattctcatggccatgcaattacctttctattcctc 18073631  T
Q  116 ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgac 215  Q
    ||||||||| |||| ||||| |||| | |||||||||| || || |||||| ||||||||||||||||| || ||||||||||  |||||||||||||||    
T  18073632 ttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgac 18073731  T
Q  216 aagggaatccataccttcattgatgacaatga 247  Q
    |||||||| | |||||||  ||||||| ||||    
T  18073732 aagggaattcgtaccttccatgatgacgatga 18073763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 303
Target Start/End: Complemental strand, 5091237 - 5091087
Alignment:
Q  153 agttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttc 252  Q
    |||||||| ||||| |||||||| ||||||||||| || ||||||||  | |||||   || ||||||||| || ||||||||||||||||  || ||||    
T  5091237 agttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttc 5091138  T
Q  253 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 303  Q
    |  |||||||  |||| ||||| |||||  ||||||||||| |||||||||    
T  5091137 agcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatcta 5091087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 7e-71; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 65 - 348
Target Start/End: Complemental strand, 28164720 - 28164437
Alignment:
Q  65 catccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggc 164  Q
    ||||||||||||  ||||| |||||||||| |  || | |||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  28164720 catccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggc 28164621  T
Q  165 actgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatg 264  Q
    | |||||||||  ||||||| || ||| ||||||| ||||| |||   ||||||||||| || || |||||||||||   ||||||| | |||||||| |    
T  28164620 agtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaag 28164521  T
Q  265 aaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    |||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  28164520 aaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcat 28164437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 85 - 348
Target Start/End: Complemental strand, 268695 - 268432
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||||||||| | || ||||||||  | ||||| || |||||||  || || |||  |||||||||  | |||||    
T  268695 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgagggttt 268596  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
    ||  ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| ||||||||||  |    
T  268595 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgac 268496  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  268495 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 268432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 111 - 348
Target Start/End: Complemental strand, 28127992 - 28127754
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||| || ||||||| |||||||||  ||||||| || ||| ||||||||||||| |||     
T  28127992 tcctcttcaatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggcccttt 28127893  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag-atgaaatcacaccatcactcatcaaggccattgaagaatctagaattt 309  Q
     ||||||||||||||| || |||||||||||   | ||||| | ||||||| |  |||||||||| |||||  | |||||||||||||||||||||||||    
T  28127892 atgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaattt 28127793  T
Q  310 ttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  28127792 ttattcctgtattttctaccaactatgcctcttcttcat 28127754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 85 - 348
Target Start/End: Complemental strand, 29274121 - 29273858
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||||||||| | || ||||||||||||||||| || |||||||  ||||| |||  |||||||||  |||||||    
T  29274121 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 29274022  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
    ||  ||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  |    
T  29274021 tattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgac 29273922  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 348  Q
    || | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29273921 aatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcat 29273858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 280
Target Start/End: Original strand, 31903727 - 31903882
Alignment:
Q  125 ttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatc 224  Q
    |||||||||||| ||| | ||||||||||| ||||| |||   |||||||| || |||||||| || ||||||||||| ||||||  ||| |||||||||    
T  31903727 ttatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatc 31903826  T
Q  225 cataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 280  Q
    || ||||| ||||| ||  | || |||||||||||| |||||||||||||||||||    
T  31903827 cacacctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 87; Significance: 1e-41; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 348
Target Start/End: Original strand, 34602 - 34824
Alignment:
Q  126 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatcc 225  Q
    ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| |  |||||||| |  ||||||  | ||||||||||||    
T  34602 tatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatcc 34701  T
Q  226 ataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttc 325  Q
    | ||||||||||||||||  || |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || ||    
T  34702 acaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtc 34801  T
Q  326 tatcaactatgcctcttcttcat 348  Q
    |||||| ||||| ||||||||||    
T  34802 tatcaattatgcttcttcttcat 34824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 111 - 346
Target Start/End: Original strand, 116658 - 116893
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| ||||| ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  |||||||||||||||| ||||| |||||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 116857  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttc 346  Q
     |||||| | || |||||||| ||||| ||||||||    
T  116858 cattcctattttgtctatcaattatgcttcttcttc 116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 348
Target Start/End: Original strand, 27313 - 27547
Alignment:
Q  114 tcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattg 213  Q
    ||||| || |||||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||  | ||||  |     
T  27313 tcttccttctcttatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgta 27412  T
Q  214 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 313  Q
    | |||||||| || || ||| ||||||| |  || |||||| |||| |||||||| ||| |||||||  |||||| ||||||||||||||| ||||| ||    
T  27413 agaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcat 27512  T
Q  314 tcctgtgttttctatcaactatgcctcttcttcat 348  Q
    |||||| || |||||||| ||||| ||||||||||    
T  27513 tcctgtcttgtctatcaattatgcttcttcttcat 27547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 348
Target Start/End: Original strand, 42864 - 43065
Alignment:
Q  147 ttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatg 246  Q
    ||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  247 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcttc 346  Q
    | |||| | |||| ||  |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || |||||||| ||||| ||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 43063  T
Q  347 at 348  Q
    ||    
T  43064 at 43065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 59343 - 59571
Alignment:
Q  16 accacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctc 115  Q
    ||||||||||| | ||||||||||||||||||||||||||||       ||||  ||||||| ||||| ||||||| ||||| |  |||| ||  |||||    
T  59343 accacaaaaacatcctcattcatattctgcattctcaaactcttct---catcttatttctctcaattctcatggccatgcaattacctttctattcctc 59439  T
Q  116 ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgac 215  Q
    ||||||||| |||| ||||| |||| | |||||||||| || || |||||| ||||||||||||||||| || ||||||||||  |||||||||||||||    
T  59440 ttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgac 59539  T
Q  216 aagggaatccataccttcattgatgacaatga 247  Q
    |||||||| | |||||||  ||||||| ||||    
T  59540 aagggaattcgtaccttccatgatgacgatga 59571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 111 - 348
Target Start/End: Complemental strand, 58607 - 58370
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| || || ||||||||||| || || |||||||| || ||||| ||   ||||||||| || |||||||| || ||||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| |||||||||||  ||||||||||| |||| ||||| |||||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T
Q  311 tattcctgtgttttctatcaactatgcctcttcttcat 348  Q
     ||||| || || |||||||||||||| ||||||||||    
T  58407 cattcccgtcttgtctatcaactatgcttcttcttcat 58370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 344
Target Start/End: Original strand, 3279562 - 3279783
Alignment:
Q  123 tcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaa 222  Q
    |||||||||||||| ||  | || ||| | ||||||||||||||||||||||| || |||||||| || |||||||| |  ||| | | ||||   |||     
T  3279562 tcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctatagagctttaagtgacggtggat 3279661  T
Q  223 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgtt 322  Q
    ||   |||||||||||||| |  || |||||  |||| ||||||||||||| ||||||  |||||||||| ||||| || |  ||||||||||| || ||    
T  3279662 tctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtctt 3279761  T
Q  323 ttctatcaactatgcctcttct 344  Q
     |||||||||||||| ||||||    
T  3279762 ctctatcaactatgcttcttct 3279783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 308
Target Start/End: Complemental strand, 17994033 - 17993812
Alignment:
Q  87 atggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggtttta 186  Q
    ||||||||||| || |||||||| || || || || |||||||| ||||  | | | |||||| | ||||| ||||| || || ||||| || ||||| |    
T  17994033 atggctatgcaatcaccttcctcctcttcctccttatcttatggtttcagcttcgatgtgttcattagtttcaggggtaccgatactcgatatggtttca 17993934  T
Q  187 cgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaa 286  Q
    | || |||||||| || ||||||  |||||||||||| |  |||||||| |||||||| || ||||| ||||| |||||||||||||| || ||| ||||    
T  17993933 ccggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatcacaccgtcgctcctcaa 17993834  T
Q  287 ggccattgaagaatctagaatt 308  Q
    |  ||||||||| || ||||||    
T  17993833 gagcattgaagactcaagaatt 17993812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 298
Target Start/End: Original strand, 16688944 - 16689060
Alignment:
Q  182 ttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 281  Q
    |||||| || ||||| ||||| |||||   |||||||||||||| |  ||||||||||||||| || ||||| ||||| ||  ||||||||||||||||     
T  16688944 ttttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcactt 16689043  T
Q  282 atcaaggccattgaaga 298  Q
    |||||||| ||||||||    
T  16689044 atcaaggcaattgaaga 16689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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