View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2377_low_6 (Length: 281)

Name: NF2377_low_6
Description: NF2377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2377_low_6
NF2377_low_6
[»] chr6 (54 HSPs)
chr6 (1-254)||(5000457-5000708)
chr6 (13-152)||(10339056-10339196)
chr6 (4-152)||(16766677-16766825)
chr6 (84-151)||(32978842-32978909)
chr6 (42-152)||(18367854-18367964)
chr6 (84-152)||(24645530-24645598)
chr6 (84-152)||(28152147-28152215)
chr6 (4-152)||(9629363-9629511)
chr6 (32-140)||(5970051-5970159)
chr6 (29-152)||(34073280-34073401)
chr6 (26-152)||(7248360-7248486)
chr6 (44-141)||(8714000-8714097)
chr6 (31-152)||(31384927-31385047)
chr6 (84-152)||(4877992-4878059)
chr6 (4-152)||(9107301-9107449)
chr6 (84-152)||(34595183-34595251)
chr6 (95-145)||(3398683-3398733)
chr6 (86-152)||(13360315-13360380)
chr6 (42-152)||(16488521-16488631)
chr6 (26-157)||(7265530-7265650)
chr6 (4-152)||(17435179-17435327)
chr6 (84-152)||(28715344-28715412)
chr6 (11-82)||(19040339-19040410)
chr6 (30-153)||(26562695-26562818)
chr6 (30-124)||(8931561-8931655)
chr6 (68-150)||(23130405-23130487)
chr6 (4-117)||(4040446-4040559)
chr6 (95-152)||(8776910-8776967)
chr6 (4-81)||(9658859-9658936)
chr6 (26-152)||(1532242-1532365)
chr6 (84-152)||(6898223-6898291)
chr6 (4-152)||(10294087-10294235)
chr6 (32-84)||(11784215-11784267)
chr6 (84-152)||(13364647-13364715)
chr6 (4-76)||(13851716-13851788)
chr6 (4-116)||(25038038-25038150)
chr6 (77-151)||(8389411-8389485)
chr6 (4-87)||(9027158-9027241)
chr6 (1-88)||(10888969-10889056)
chr6 (247-281)||(5000298-5000332)
chr6 (106-152)||(9027238-9027284)
chr6 (83-141)||(23771626-23771684)
chr6 (106-152)||(31959221-31959267)
chr6 (106-151)||(9025448-9025493)
chr6 (30-87)||(9025490-9025547)
chr6 (31-132)||(9522898-9522999)
chr6 (41-154)||(11352378-11352491)
chr6 (99-152)||(12236723-12236776)
chr6 (63-132)||(21223717-21223786)
chr6 (88-141)||(24831861-24831914)
chr6 (84-152)||(7378028-7378096)
chr6 (106-158)||(7625187-7625239)
chr6 (84-152)||(7977772-7977840)
chr6 (32-123)||(32313412-32313504)
[»] chr1 (64 HSPs)
chr1 (26-152)||(9828046-9828172)
chr1 (34-152)||(25361896-25362010)
chr1 (4-152)||(5944261-5944411)
chr1 (16-127)||(9629856-9629967)
chr1 (44-152)||(47989517-47989625)
chr1 (4-152)||(1486646-1486788)
chr1 (4-152)||(40917731-40917877)
chr1 (85-149)||(5898211-5898275)
chr1 (4-152)||(6414933-6415080)
chr1 (4-116)||(16252853-16252965)
chr1 (84-152)||(22515829-22515897)
chr1 (44-152)||(31694641-31694749)
chr1 (84-152)||(40258875-40258943)
chr1 (73-152)||(6427513-6427592)
chr1 (13-124)||(27471525-27471636)
chr1 (1-134)||(38503297-38503428)
chr1 (84-138)||(43492450-43492504)
chr1 (26-152)||(34371716-34371843)
chr1 (28-105)||(44482234-44482311)
chr1 (84-140)||(1815306-1815362)
chr1 (84-152)||(38078603-38078671)
chr1 (84-154)||(29163321-29163391)
chr1 (32-141)||(16164257-16164366)
chr1 (13-131)||(17831485-17831601)
chr1 (84-153)||(42359390-42359459)
chr1 (86-131)||(52284764-52284809)
chr1 (100-152)||(9690215-9690267)
chr1 (84-152)||(46348325-46348393)
chr1 (84-152)||(51410074-51410142)
chr1 (4-87)||(20157346-20157429)
chr1 (4-67)||(34298416-34298479)
chr1 (5-83)||(2896121-2896199)
chr1 (14-152)||(17754301-17754439)
chr1 (78-152)||(18556387-18556461)
chr1 (110-152)||(22881569-22881611)
chr1 (42-152)||(25934634-25934744)
chr1 (106-152)||(29144322-29144368)
chr1 (106-152)||(46940750-46940796)
chr1 (99-152)||(17778617-17778670)
chr1 (84-141)||(18190061-18190118)
chr1 (26-121)||(26238078-26238169)
chr1 (88-152)||(34741899-34741963)
chr1 (31-87)||(7918207-7918263)
chr1 (73-152)||(15765795-15765875)
chr1 (88-152)||(16297223-16297287)
chr1 (88-152)||(33202956-33203020)
chr1 (4-67)||(398781-398844)
chr1 (27-102)||(21038086-21038161)
chr1 (13-67)||(36878450-36878504)
chr1 (86-140)||(40181922-40181976)
chr1 (106-152)||(52903317-52903363)
chr1 (83-132)||(2896083-2896132)
chr1 (32-141)||(6612113-6612222)
chr1 (6-67)||(12443476-12443537)
chr1 (95-152)||(12919005-12919062)
chr1 (63-152)||(17408730-17408819)
chr1 (84-157)||(19637817-19637890)
chr1 (83-152)||(27965942-27966011)
chr1 (26-75)||(28674802-28674851)
chr1 (44-153)||(48147967-48148076)
chr1 (1-61)||(15641052-15641112)
chr1 (1-61)||(16812520-16812580)
chr1 (84-124)||(21530738-21530778)
chr1 (89-149)||(26830641-26830701)
[»] chr7 (46 HSPs)
chr7 (13-152)||(32308109-32308248)
chr7 (30-152)||(24339648-24339770)
chr7 (84-152)||(598257-598325)
chr7 (89-152)||(43027406-43027469)
chr7 (31-152)||(11665371-11665492)
chr7 (26-131)||(19206052-19206157)
chr7 (30-155)||(26033389-26033514)
chr7 (32-152)||(7438714-7438834)
chr7 (84-152)||(15680858-15680926)
chr7 (84-152)||(21880201-21880269)
chr7 (84-152)||(33994261-33994329)
chr7 (89-152)||(5409773-5409836)
chr7 (77-152)||(21831828-21831903)
chr7 (4-152)||(1433434-1433576)
chr7 (84-152)||(21864857-21864925)
chr7 (89-152)||(32093956-32094020)
chr7 (32-153)||(9408264-9408385)
chr7 (44-152)||(2334270-2334377)
chr7 (89-149)||(13770750-13770810)
chr7 (13-152)||(20549780-20549908)
chr7 (84-152)||(22484074-22484142)
chr7 (84-152)||(32287405-32287473)
chr7 (83-130)||(7973087-7973134)
chr7 (89-152)||(9778559-9778622)
chr7 (32-111)||(26329354-26329433)
chr7 (4-67)||(26733284-26733347)
chr7 (1-51)||(598185-598235)
chr7 (98-132)||(10043007-10043041)
chr7 (100-150)||(40287306-40287356)
chr7 (83-152)||(3554448-3554517)
chr7 (87-132)||(8234198-8234243)
chr7 (31-115)||(9933282-9933364)
chr7 (4-81)||(17851411-17851488)
chr7 (32-124)||(15902830-15902922)
chr7 (96-152)||(20545186-20545242)
chr7 (98-141)||(3294257-3294300)
chr7 (89-151)||(2533761-2533823)
chr7 (106-152)||(6490787-6490833)
chr7 (106-152)||(10359670-10359716)
chr7 (106-152)||(24105749-24105795)
chr7 (106-152)||(40131941-40131987)
chr7 (26-67)||(29787385-29787426)
chr7 (30-82)||(3721099-3721151)
chr7 (84-120)||(7197271-7197307)
chr7 (4-60)||(11722121-11722177)
chr7 (100-152)||(18035807-18035858)
[»] chr4 (59 HSPs)
chr4 (23-152)||(30982809-30982938)
chr4 (31-152)||(24613632-24613753)
chr4 (44-152)||(22234821-22234929)
chr4 (26-152)||(36635326-36635447)
chr4 (7-132)||(903905-904030)
chr4 (84-152)||(23292928-23292996)
chr4 (95-158)||(29205528-29205591)
chr4 (30-152)||(47263992-47264114)
chr4 (84-150)||(12797282-12797348)
chr4 (96-152)||(715547-715603)
chr4 (96-152)||(752873-752929)
chr4 (84-152)||(12895216-12895284)
chr4 (44-152)||(19312355-19312463)
chr4 (84-152)||(34306746-34306814)
chr4 (89-152)||(14465007-14465070)
chr4 (26-141)||(30522858-30522972)
chr4 (78-152)||(19482722-19482796)
chr4 (26-152)||(23861371-23861488)
chr4 (28-152)||(847955-848079)
chr4 (84-152)||(28964190-28964258)
chr4 (84-152)||(35157927-35157995)
chr4 (1-152)||(38148656-38148807)
chr4 (89-152)||(3947703-3947766)
chr4 (84-150)||(20743210-20743277)
chr4 (84-154)||(4157198-4157268)
chr4 (84-154)||(4157485-4157555)
chr4 (17-139)||(5832638-5832760)
chr4 (31-104)||(4383375-4383447)
chr4 (83-152)||(8423660-8423729)
chr4 (84-141)||(21945552-21945609)
chr4 (95-152)||(35161096-35161153)
chr4 (107-152)||(37203324-37203369)
chr4 (106-151)||(46715416-46715461)
chr4 (84-141)||(49431075-49431132)
chr4 (96-152)||(3064870-3064926)
chr4 (26-82)||(8423719-8423775)
chr4 (84-152)||(16073443-16073511)
chr4 (84-124)||(29205493-29205533)
chr4 (96-152)||(44081509-44081565)
chr4 (97-152)||(7214468-7214523)
chr4 (100-147)||(21873309-21873356)
chr4 (100-147)||(21929170-21929217)
chr4 (4-67)||(22440616-22440679)
chr4 (78-152)||(24343555-24343630)
chr4 (42-152)||(5414103-5414213)
chr4 (26-100)||(21658797-21658871)
chr4 (106-148)||(30094084-30094126)
chr4 (100-157)||(482180-482237)
chr4 (83-152)||(21345475-21345544)
chr4 (84-141)||(30103310-30103367)
chr4 (115-152)||(30299009-30299046)
chr4 (115-152)||(30327877-30327914)
chr4 (13-93)||(35723374-35723455)
chr4 (96-129)||(36409469-36409502)
chr4 (96-129)||(36423635-36423668)
chr4 (85-134)||(40179596-40179645)
chr4 (84-152)||(53381532-53381601)
chr4 (32-88)||(5775353-5775409)
chr4 (100-152)||(12884349-12884401)
[»] chr8 (46 HSPs)
chr8 (4-152)||(22651956-22652104)
chr8 (4-152)||(29510235-29510383)
chr8 (47-152)||(29447467-29447572)
chr8 (32-152)||(11803267-11803387)
chr8 (32-152)||(11944673-11944793)
chr8 (30-152)||(8343322-8343444)
chr8 (84-134)||(44462155-44462205)
chr8 (84-134)||(44469688-44469738)
chr8 (31-152)||(15816060-15816181)
chr8 (31-152)||(29447041-29447162)
chr8 (26-152)||(24362132-24362259)
chr8 (4-123)||(2572016-2572135)
chr8 (26-149)||(12570669-12570791)
chr8 (84-150)||(5813641-5813707)
chr8 (86-132)||(31557047-31557093)
chr8 (84-148)||(33405330-33405394)
chr8 (86-149)||(12570443-12570506)
chr8 (32-150)||(4122182-4122300)
chr8 (106-152)||(8343038-8343084)
chr8 (78-152)||(12402617-12402691)
chr8 (95-141)||(22943302-22943348)
chr8 (42-152)||(26902106-26902216)
chr8 (4-109)||(28384967-28385073)
chr8 (84-153)||(926729-926798)
chr8 (83-152)||(14134747-14134816)
chr8 (84-153)||(20679336-20679405)
chr8 (7-76)||(34897068-34897137)
chr8 (84-152)||(3951478-3951546)
chr8 (32-152)||(6065588-6065708)
chr8 (31-83)||(14134706-14134758)
chr8 (73-152)||(27067233-27067310)
chr8 (88-152)||(36450696-36450760)
chr8 (4-59)||(36934650-36934705)
chr8 (85-148)||(38079049-38079112)
chr8 (84-146)||(126295-126357)
chr8 (106-148)||(40064033-40064075)
chr8 (75-152)||(4673356-4673433)
chr8 (84-152)||(17751704-17751773)
chr8 (84-152)||(17760691-17760760)
chr8 (95-152)||(18407779-18407836)
chr8 (84-152)||(949207-949275)
chr8 (30-82)||(3025557-3025609)
chr8 (30-149)||(22197676-22197795)
chr8 (84-152)||(24413501-24413569)
chr8 (4-99)||(29776016-29776109)
chr8 (106-154)||(44067598-44067646)
[»] scaffold0036 (1 HSPs)
scaffold0036 (31-152)||(9678-9799)
[»] chr3 (46 HSPs)
chr3 (26-152)||(8039766-8039892)
chr3 (13-153)||(4987221-4987361)
chr3 (84-152)||(40993277-40993345)
chr3 (32-152)||(15796225-15796345)
chr3 (84-152)||(20503514-20503582)
chr3 (84-152)||(55401124-55401192)
chr3 (83-154)||(29508498-29508569)
chr3 (26-152)||(17005550-17005676)
chr3 (30-130)||(14832105-14832205)
chr3 (89-152)||(27505305-27505368)
chr3 (31-141)||(28812522-28812632)
chr3 (30-152)||(34185054-34185176)
chr3 (106-152)||(40052383-40052429)
chr3 (16-105)||(16192728-16192817)
chr3 (8-135)||(2620003-2620128)
chr3 (106-154)||(25775578-25775626)
chr3 (84-152)||(8789490-8789560)
chr3 (26-148)||(25064911-25065031)
chr3 (32-123)||(26290379-26290470)
chr3 (89-147)||(3631738-3631796)
chr3 (83-157)||(8842377-8842451)
chr3 (84-150)||(25093551-25093617)
chr3 (86-152)||(26492147-26492213)
chr3 (30-152)||(49651718-49651839)
chr3 (111-152)||(34910393-34910434)
chr3 (4-152)||(37077338-37077487)
chr3 (89-152)||(5440969-5441033)
chr3 (84-152)||(11252025-11252093)
chr3 (30-141)||(11313737-11313853)
chr3 (96-152)||(15999952-16000008)
chr3 (10-61)||(13620786-13620837)
chr3 (106-141)||(21720843-21720878)
chr3 (84-123)||(45451602-45451641)
chr3 (27-82)||(49505155-49505210)
chr3 (13-67)||(1438793-1438847)
chr3 (26-104)||(1550142-1550220)
chr3 (32-82)||(7614416-7614466)
chr3 (106-152)||(25074866-25074912)
chr3 (88-141)||(7171554-7171607)
chr3 (29-150)||(11665949-11666070)
chr3 (83-152)||(18426997-18427066)
chr3 (106-155)||(24204980-24205029)
chr3 (30-99)||(28678309-28678378)
chr3 (26-82)||(7928452-7928508)
chr3 (100-152)||(8101894-8101946)
chr3 (83-123)||(14338454-14338494)
[»] scaffold0008 (1 HSPs)
scaffold0008 (4-152)||(263303-263451)
[»] chr5 (43 HSPs)
chr5 (26-152)||(3966505-3966631)
chr5 (4-152)||(21522730-21522878)
chr5 (4-152)||(21533296-21533444)
chr5 (30-152)||(7677711-7677833)
chr5 (26-152)||(32766874-32767000)
chr5 (4-149)||(15410382-15410527)
chr5 (5-154)||(19579682-19579831)
chr5 (4-149)||(7174954-7175098)
chr5 (84-141)||(15382534-15382591)
chr5 (26-151)||(18592075-18592200)
chr5 (84-153)||(21190997-21191066)
chr5 (4-93)||(22423802-22423891)
chr5 (27-152)||(30098329-30098454)
chr5 (26-102)||(12264810-12264886)
chr5 (84-152)||(30502330-30502398)
chr5 (84-152)||(30542673-30542741)
chr5 (42-152)||(21814279-21814389)
chr5 (30-104)||(25817501-25817575)
chr5 (83-152)||(17123096-17123164)
chr5 (84-152)||(28588616-28588684)
chr5 (34-152)||(14873527-14873639)
chr5 (73-124)||(21542079-21542130)
chr5 (42-152)||(6401516-6401626)
chr5 (26-152)||(11685941-11686066)
chr5 (44-130)||(12641694-12641780)
chr5 (95-149)||(21194068-21194122)
chr5 (106-152)||(21351852-21351898)
chr5 (30-152)||(41091188-41091310)
chr5 (95-152)||(16304368-16304425)
chr5 (31-152)||(40131628-40131749)
chr5 (89-154)||(43001859-43001924)
chr5 (84-153)||(18421778-18421851)
chr5 (13-69)||(19438332-19438388)
chr5 (84-152)||(42893409-42893477)
chr5 (16-83)||(12927646-12927713)
chr5 (4-67)||(22299497-22299559)
chr5 (31-130)||(30183556-30183655)
chr5 (106-152)||(2436982-2437028)
chr5 (106-152)||(19820330-19820376)
chr5 (84-150)||(30098982-30099048)
chr5 (102-152)||(38464315-38464365)
chr5 (106-146)||(17088362-17088402)
chr5 (27-75)||(17593730-17593778)
[»] chr2 (39 HSPs)
chr2 (84-153)||(2438660-2438729)
chr2 (84-152)||(18840955-18841023)
chr2 (29-152)||(27286223-27286346)
chr2 (26-152)||(44860322-44860448)
chr2 (73-152)||(26769560-26769639)
chr2 (6-152)||(22084758-22084909)
chr2 (33-152)||(37419752-37419871)
chr2 (30-152)||(11223795-11223916)
chr2 (4-157)||(34784908-34785061)
chr2 (84-152)||(15972922-15972990)
chr2 (32-151)||(17776595-17776714)
chr2 (1-76)||(23718003-23718078)
chr2 (1-76)||(24105675-24105750)
chr2 (26-152)||(4207859-4207984)
chr2 (13-152)||(21782746-21782888)
chr2 (26-152)||(24975257-24975382)
chr2 (42-152)||(36096306-36096416)
chr2 (88-152)||(38117101-38117165)
chr2 (93-152)||(15907853-15907912)
chr2 (106-152)||(15909572-15909618)
chr2 (89-152)||(35449561-35449626)
chr2 (84-153)||(19942314-19942383)
chr2 (4-153)||(36756274-36756423)
chr2 (84-132)||(5367241-5367289)
chr2 (28-123)||(18889550-18889646)
chr2 (81-141)||(27084315-27084375)
chr2 (13-81)||(31808066-31808134)
chr2 (84-152)||(37559026-37559094)
chr2 (84-151)||(21091772-21091839)
chr2 (4-67)||(21616742-21616805)
chr2 (106-152)||(10535687-10535733)
chr2 (90-152)||(19959881-19959943)
chr2 (25-67)||(25846742-25846784)
chr2 (32-132)||(2331802-2331900)
chr2 (84-152)||(37497169-37497238)
chr2 (5-109)||(4882670-4882774)
chr2 (84-152)||(20242669-20242737)
chr2 (84-152)||(30404792-30404860)
chr2 (96-152)||(34993924-34993980)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-152)||(241574-241722)
[»] scaffold0044 (1 HSPs)
scaffold0044 (27-132)||(53183-53288)
[»] scaffold0136 (1 HSPs)
scaffold0136 (44-152)||(3780-3888)
[»] scaffold0019 (1 HSPs)
scaffold0019 (73-152)||(71774-71853)
[»] scaffold0004 (1 HSPs)
scaffold0004 (7-152)||(92790-92939)
[»] scaffold0050 (1 HSPs)
scaffold0050 (84-151)||(70327-70394)
[»] scaffold0086 (1 HSPs)
scaffold0086 (75-148)||(2979-3052)
[»] scaffold0793 (1 HSPs)
scaffold0793 (96-152)||(4823-4879)
[»] scaffold0652 (1 HSPs)
scaffold0652 (84-152)||(404-472)
[»] scaffold0123 (1 HSPs)
scaffold0123 (26-122)||(44486-44582)
[»] scaffold0053 (1 HSPs)
scaffold0053 (84-152)||(8847-8915)
[»] scaffold0039 (1 HSPs)
scaffold0039 (42-135)||(84921-85014)
[»] scaffold0361 (1 HSPs)
scaffold0361 (88-152)||(14580-14644)
[»] scaffold0168 (1 HSPs)
scaffold0168 (32-100)||(21051-21119)
[»] scaffold0024 (1 HSPs)
scaffold0024 (11-115)||(68210-68314)
[»] scaffold1528 (1 HSPs)
scaffold1528 (14-109)||(1025-1120)
[»] scaffold0011 (1 HSPs)
scaffold0011 (84-157)||(17539-17612)
[»] scaffold0697 (1 HSPs)
scaffold0697 (84-124)||(1693-1733)


Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 5000708 - 5000457
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacg 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5000708 catgacacggatactgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacg 5000609  T
Q  101 acacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgataaagtgagagnnnnnnnnnngattattctttgtcatgtaactgt 200  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||          ||||||||||||||||||||||||    
T  5000608 acacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcattgatgaagtgggag--gaaaaaaagattattctttgtcatgtaactgt 5000511  T
Q  201 tggagaagcacagtgtccatcagagagtgatagacacacagagggacagtgaaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5000510 tggagaagcacagtgtccatcagagagtgatagacacacagagggacagagaaa 5000457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 10339196 - 10339056
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtat-aattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccg 111  Q
    ||||||||  || |||||| | ||||| ||||||||||||| ||||||| | |||| ||| |||||||| | |||||||||| |||||||||||||||||    
T  10339196 actgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccg 10339097  T
Q  112 acaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||| |||||||| |||||| || |||||| ||||||||||    
T  10339096 acactgggacacgcctaatcggaggagtgtccgtgcttcat 10339056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 16766677 - 16766825
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||| ||| ||||||||  || ||| |||||||||| || |||||||||| ||||||| |||||  |  |||| ||||| |||||||||| ||||| |||    
T  16766677 gacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaaca 16766776  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | ||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  16766777 cgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcat 16766825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 32978909 - 32978842
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 151  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  32978909 tgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 18367854 - 18367964
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||||  || |||| ||||| ||| |||| ||||| |||||||||||||||||||||||||| ||||| |||||||| || |||| | ||||||    
T  18367854 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgt 18367953  T
Q  142 tcgtgcttcat 152  Q
     ||||||||||    
T  18367954 ccgtgcttcat 18367964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 24645530 - 24645598
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||||||    
T  24645530 tgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcat 24645598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 28152147 - 28152215
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| ||||||||||||||||| | ||||||||| |||||||||||||||||    
T  28152147 tgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcat 28152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 9629363 - 9629511
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtc-atgtcggtgtcagacacgac 102  Q
    |||||||||| ||||||  || |||||| ||||||| ||||||||||||| ||||| | ||||| ||| |||| |||||  |||| ||||| ||||| ||    
T  9629363 gacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtc-gtgtcggacacaac 9629461  T
Q  103 acatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |  |||||||||| | |||||||||||||||| |||||| | ||||||||    
T  9629462 atgtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcat 9629511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 5970159 - 5970051
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| || |||||||||| ||||||| |||||  | ||||  ||||| |||||||||| |||||||||||| ||||||| ||||||||| | ||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatc 5970060  T
Q  132 cgaagagtg 140  Q
    ||| |||||    
T  5970059 cgaggagtg 5970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 34073401 - 34073280
Alignment:
Q  29 cgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtcta 128  Q
    ||||||||||| ||||||||| ||| ||||||| ||||| |||  ||| ||||| ||||||||||  ||||||||  || ||||||||||||||| ||||    
T  34073401 cgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc-tacacgacatgtg-ccgacaccgggacacctcta 34073304  T
Q  129 atccgaagagtgttcgtgcttcat 152  Q
    || ||| |||||| ||||||||||    
T  34073303 attcgaggagtgtccgtgcttcat 34073280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 7248360 - 7248486
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||| ||||||||  ||| ||||||||| ||||||  ||||| ||| |||  | ||| |||||||||  ||||| |||  ||||||||||||||||||||    
T  7248360 caccactaataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgt 7248459  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    | ||||||| |||||| ||||||||||    
T  7248460 caaatccgaggagtgtccgtgcttcat 7248486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 8714000 - 8714097
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||| ||||||| |||||  | ||||  ||||| |||||||||| |||||||||||| ||||||| ||||||||| | ||||||| ||||||    
T  8714000 aaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgt 8714097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 31384927 - 31385047
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| || |||||||||| ||||||| |||||  |  |||||||||| ||| | |||  |||||||||| ||||| ||||||||||||| |||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtag-tgttggacacgacacgtgtcctacaccgggacacgcctaat 31385025  T
Q  131 ccgaagagtgttcgtgcttcat 152  Q
    || | |||||| ||||||||||    
T  31385026 ccaaggagtgtccgtgcttcat 31385047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 4877992 - 4878059
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||||||||||| | ||||||| ||||||||| |||||| ||||||||||    
T  4877992 tgtcggtgtcggacacgacacatgtccgaca-caggacacgcctaatccgaggagtgtccgtgcttcat 4878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 9107449 - 9107301
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||| ||||  || ||| |||||||||| || |||||||||  ||||||| |||||  |  |||| ||||| |||||||||| ||||| ||     
T  9107449 gacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacg 9107350  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
      ||||||||||||||||||  ||||||||| |||||  ||||||||||    
T  9107349 tgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcat 9107301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 34595183 - 34595251
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| |||| |||||||||||||  ||||||||| |||||| ||||||||||    
T  34595183 tgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcat 34595251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 3398683 - 3398733
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgt 145  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  3398683 gacacgacacatgtccgacaccggaacacgtctaatcagaggagtgttcgt 3398733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 13360380 - 13360315
Alignment:
Q  86 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||| ||| ||||||||||| | |||||| |||||||||||||||| ||||||||||    
T  13360380 tcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcat 13360315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 16488631 - 16488521
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||||  || |||| ||||| ||| |||| ||||| |||||||||| |||||||||| |||| | ||| |||||||| || |||| | || |||    
T  16488631 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgt 16488532  T
Q  142 tcgtgcttcat 152  Q
    |||||||||||    
T  16488531 tcgtgcttcat 16488521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 7265650 - 7265530
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| ||||||||||||| ||||||| |||||  ||||||         ||||||||| ||||| | |||||||||||||||| | | |     
T  7265650 caccgctaataatttgagaaaatcacataattcagtgtaatt--atatgt---------gtcggtgtcggacacaatacatgtccgacaccggaatatgc 7265562  T
Q  126 ctaatccgaagagtgttcgtgcttcattgata 157  Q
    ||||||||| ||| || |||||||||||||||    
T  7265561 ctaatccgaggagcgtccgtgcttcattgata 7265530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 17435179 - 17435327
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||| || ||| ||  ||||||||||  | ||||| |||| ||||||| |||||  |  ||| |||||  ||||| |||| |||||||||    
T  17435179 gacacggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgaca 17435278  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | ||| |||||| ||||||||||||||| ||| ||||| ||| ||||||    
T  17435279 cgtgttcgacactgggacacgtctaatctgaaaagtgtccgtacttcat 17435327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 28715344 - 28715412
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| ||| ||||||||||||||| ||||| |||  ||||| ||||||||||    
T  28715344 tgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcat 28715412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 19040339 - 19040410
Alignment:
Q  11 atactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtc 82  Q
    ||||||||||  || |||||||||||||| ||||||||||||| ||||||| ||||| ||| |||| |||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtc 19040410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 26562695 - 26562818
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    ||||| |||| ||||||||||||| ||||||| ||||| ||| ||||  |||| ||||||||||  ||||| ||||||||||| |  | |||| | ||||    
T  26562695 gctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacggcacatgtccgatatagagacatggctaa 26562794  T
Q  130 tccgaagagtgttcgtgcttcatt 153  Q
    || ||  ||||||||| |||||||    
T  26562795 tctgagaagtgttcgtacttcatt 26562818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 8931655 - 8931561
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacg 124  Q
    ||||| |||| |||||||| |||| ||||||||||||| ||| ||||  |||| |||||||||||||  |||||||| ||| |||| | ||||||    
T  8931655 gctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtcggtgtcagatgcgacacatatccaacacggagacacg 8931561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 23130487 - 23130405
Alignment:
Q  68 ttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 150  Q
    |||| |||||||||||||| ||||||||||||||||| |||| || | ||||||| | |||||| || ||||||  |||||||    
T  23130487 ttatgtgtcagtgtcatgttggtgtcagacacgacacgtgtctgatatcgggacatgcctaatctgaggagtgtatgtgcttc 23130405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 4040446 - 4040559
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||| | ||| || |||| |||||||||  |||||||| ||| ||||||||||||| |||||||| | ||| | ||| | ||||||||||||    
T  4040446 gacacggacacttaaacaccgacaccactaataatttaagaaaatcgcattattcagtataattatatatgtcggcgtcgtctcgatatcagacacgaca 4040545  T
Q  104 catgtccgacaccg 117  Q
    | | ||| ||||||    
T  4040546 cgtatccaacaccg 4040559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 8776967 - 8776910
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||| |||||  ||||||||| |||||| ||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcat 8776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 9658859 - 9658936
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgt 81  Q
    |||||||| ||||||||  || ||||||||||||||  |||||||||||| ||||||| ||||| ||| |||| ||||    
T  9658859 gacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 1532242 - 1532365
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| || ||||| |||| ||||||| ||||| ||| ||   ||||| ||| |||||||||||  |||||||| | ||| |||| ||  |    
T  1532242 caccgctaataatttgataaaattacataattcagtgtaattatatgtg---gtgtcgtgttggtgtcagacatcacacatgttctacatcggggcatat 1532338  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| ||| |||||| ||||||||||    
T  1532339 ctaattcgaggagtgtccgtgcttcat 1532365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 6898291 - 6898223
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||  | ||||| ||||||  ||||| ||||||||| |||||||||||||||||    
T  6898291 tgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcat 6898223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 10294087 - 10294235
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    ||||||||||||||||   ||  ||||||||||||| |||| |||| |||  |||| | ||||| ||| |||| ||||| ||| |||||| |||||||||    
T  10294087 gacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgaca 10294186  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
      ||||||| ||  ||||||  |||||| || ||||||  |||||||||    
T  10294187 tgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttcat 10294235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 11784267 - 11784215
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcat 84  Q
    |||||||| ||||||||||||||| ||||| ||||| |||||||| |||||||    
T  11784267 taataatttgagaaaatcacatgaatcagtgtaattatatatgtcggtgtcat 11784215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 13364715 - 13364647
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||  ||||||| ||||||| |||||| ||||||||||| ||||| ||||||  |||||||||    
T  13364715 tgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcat 13364647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 13851716 - 13851788
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtc 76  Q
    |||||||| |||||||| ||| |||||||||||||| |||||||| || | ||||||| ||||| ||| ||||    
T  13851716 gacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 13851788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 25038150 - 25038038
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    ||||| ||||||||||| | | ||||| |||||||| |||||||| |||| ||| ||| |||||  | ||||| || |  ||| |||||| |||||||||    
T  25038150 gacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgaca 25038051  T
Q  104 catgtccgacacc 116  Q
    | |||||||||||    
T  25038050 cgtgtccgacacc 25038038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 8389485 - 8389411
Alignment:
Q  77 agtgtcatgtcggtgtcagacacgacaca-tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 151  Q
    ||||||||||||||||| ||| | ||||  ||||||||||||||||||  ||||||||| |||||| |||||||||    
T  8389485 agtgtcatgtcggtgtcggac-caacacggtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 9027158 - 9027241
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtc 87  Q
    |||||||| ||||||||  || |||||||||||||| |||| |||||||| |||| || ||||| ||| |||| ||||| ||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtc 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10889056 - 10888969
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcg 88  Q
    ||||||||||| || ||||||| | |||||||||||||| || |||||||||| ||| ||| | ||| ||| ||| |||||| |||||    
T  10889056 catgacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgttagtgtcgtgtcg 10888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 281
Target Start/End: Complemental strand, 5000332 - 5000298
Alignment:
Q  247 cagtgaaagagtacacttatgactcaataaatggt 281  Q
    ||||||||||||||| |||||||||||||||||||    
T  5000332 cagtgaaagagtacaattatgactcaataaatggt 5000298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 9027238 - 9027284
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||| ||||||| | ||||||| |||||||||    
T  9027238 tgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcat 9027284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 23771626 - 23771684
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    ||||||||||| |||||||||  |||||||||| | ||||||||||| | |||||||||    
T  23771626 atgtcggtgtcggacacgacatgtgtccgacacagagacacgtctaacctgaagagtgt 23771684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 31959221 - 31959267
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  31959221 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 31959267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 9025493 - 9025448
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 151  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||    
T  9025493 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 9025547 - 9025490
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtc 87  Q
    |||||||||| ||||||||||||| ||||||| ||||| ||| |||| ||||| ||||    
T  9025547 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 9522898 - 9522999
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    |||||||||  | |||||||||| ||||||| |||||  |  |||| ||||  |||||||||| ||  |||||| |||||||||||| |||||| |||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaat 9522997  T
Q  131 cc 132  Q
    ||    
T  9522998 cc 9522999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 11352378 - 11352491
Alignment:
Q  41 gagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtg 140  Q
    ||||||||||| | ||||  | ||||| ||| | ||| |||| ||||||| |||||||| |||| ||||||||| | |||||||| | | || |||||||    
T  11352378 gagaaaatcacctaattccttgtaattatatgtatcaatgtcgtgtcggtatcagacacaacacgtgtccgacatcaggacacgttttacccaaagagtg 11352477  T
Q  141 ttcgtgcttcattg 154  Q
    | ||||||| ||||    
T  11352478 tccgtgctttattg 11352491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 12236723 - 12236776
Alignment:
Q  99 cgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| || |||||||||||| |||| | || |||||||||||||||||    
T  12236723 cgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgcttcat 12236776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 21223786 - 21223717
Alignment:
Q  63 taattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 132  Q
    ||||| |||||||||||||| ||||||||||  |||| || | ||||||||| |||| |||| |||||||    
T  21223786 taattatatatgtcagtgtcgtgtcggtgtcgaacacaacgcgtgtccgacaacgggtcacgcctaatcc 21223717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 24831861 - 24831914
Alignment:
Q  88 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    ||||||| |||| ||| || || |||| ||||||||||||||||||||||||||    
T  24831861 ggtgtcaaacacaacatatatctgacatcgggacacgtctaatccgaagagtgt 24831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 7378028 - 7378096
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||    ||||||||||||||||| |||||| ||  ||||| ||||||||||    
T  7378028 tgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcat 7378096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 7625187 - 7625239
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgataa 158  Q
    ||||||||||||| |||||  |||||| | ||||||||||||||||| |||||    
T  7625187 tgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatagataa 7625239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 7977840 - 7977772
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||| ||| |||||||||| ||  ||||| ||||||  | |||||||||||||||||    
T  7977840 tgtcggtgtcggacacaacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcat 7977772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 32313412 - 32313504
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacac-gacacatgtccgacaccgggacac 123  Q
    |||||| | |||||||| |||||||||| |  |||| ||| |||  ||||| |||||||||||||||| |||  |||||| ||||||||||||    
T  32313412 taataagttgagaaaataacatgattcaatgcaattatatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacac 32313504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 9828046 - 9828172
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||| ||||||||| || |||||||||| ||||||| ||||||||| |||| ||||| |||| |||||||||||||||| ||||||||||||||||||||    
T  9828046 caccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgt 9828145  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||| |||||| ||||||||||    
T  9828146 ctaatccgaggagtgtccgtgcttcat 9828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 25361896 - 25362010
Alignment:
Q  34 ataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccg 133  Q
    |||||| ||||||||||||| ||||||| ||||| ||| |||||||||| |||||||||| ||||||  |||||||||||||||| ||||  ||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacg--acatgtccgacaccggaacac--ctaatccg 25361991  T
Q  134 aagagtgttcgtgcttcat 152  Q
    |||||||| ||||||||||    
T  25361992 aagagtgtccgtgcttcat 25362010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 5944261 - 5944411
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaa--tcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacga 101  Q
    ||||| || ||||||||  |||||| |||||||||| || ||||  |||||| ||||||| ||||| ||  |||| ||||| ||||| || | ||||| |    
T  5944261 gacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaa 5944360  T
Q  102 cacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  5944361 cacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcat 5944411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 9629967 - 9629856
Alignment:
Q  16 gacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacac 115  Q
    ||||||||| |||||||||||||| || ||||||| || ||||||| | ||| ||  |||| ||||| ||||| |||| |||||||||||||||||||||    
T  9629967 gacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacac 9629868  T
Q  116 cgggacacgtct 127  Q
    ||||||||||||    
T  9629867 cgggacacgtct 9629856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 47989517 - 47989625
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttc 143  Q
    |||||||||| ||||||| |||||  |  |||| ||||| |||||||||| ||||||||||||||| |||| ||||||||| ||||||||| |||||| |    
T  47989517 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtcc 47989616  T
Q  144 gtgcttcat 152  Q
    |||||||||    
T  47989617 gtgcttcat 47989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 1486788 - 1486646
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||||||||||||   | ||| |||||||||| || |||||||||| ||||||| ||||| ||  |||| ||||| ||||||      ||||||||    
T  1486788 gacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgg------acacgaca 1486695  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | ||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  1486694 cgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 40917731 - 40917877
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||||||||||||  || ||| |||||||||| || |||||||||  ||| ||| |||||  |  | || ||||| |||||||||  |||||||||    
T  40917731 gacacggatactgacacgccgacacagctaataatttgaaaaaatcaca--attaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgaca 40917828  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | ||||||||||||||||||| ||||||||| || ||| ||||||||||    
T  40917829 cgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcat 40917877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 5898275 - 5898211
Alignment:
Q  85 gtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 149  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||    
T  5898275 gtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 6415080 - 6414933
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||||||  || || ||||||| ||| ||||||||||||| || |||| |||||  || |||| ||||||| ||| |||| |||||||||    
T  6415080 gacacggacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtcat-tcgatgtcggacacgaca 6414982  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | |||| ||||||| ||||| | | |||||| |||||| ||||||||||    
T  6414981 cgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcat 6414933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 16252965 - 16252853
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||||||||| |||||  ||||| ||||||||| ||||||| | |||||||||| ||||| ||| |||  |||| | |||||||| ||||||||||    
T  16252965 gacacggatactgatacatcaacaccgttaataattcaagaaaatgatatgattcagtgtaattatatgtgttcgtgttaggtcggtgttagacacgaca 16252866  T
Q  104 catgtccgacacc 116  Q
     ||||| ||||||    
T  16252865 tatgtctgacacc 16252853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 22515897 - 22515829
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||| |||||||||| |||||| ||||||||| |||||| ||||||||||    
T  22515897 tgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 22515829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 31694749 - 31694641
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttc 143  Q
    |||||||||| |||||||||||||  |  |||| ||||| |||||||||| ||||| |||||| | ||||||||| ||||| |||||| || |||||| |    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtcc 31694650  T
Q  144 gtgcttcat 152  Q
    |||||||||    
T  31694649 gtgcttcat 31694641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 40258943 - 40258875
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||| | ||||||||    
T  40258943 tgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcat 40258875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 6427513 - 6427592
Alignment:
Q  73 tgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||| || ||| |||||||||| ||||||||||||||||||| |||||| || |||||| ||||||||||    
T  6427513 tgtcagtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcat 6427592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 27471636 - 27471525
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccga 112  Q
    ||||||||| ||  ||||||||||||| ||||||| ||||| ||||||| |||||  || |||  ||||||| |||||||  || ||||||| |||||||    
T  27471636 actgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtcatatcggtgttggatacgacacgtgtccga 27471537  T
Q  113 caccgggacacg 124  Q
    ||||||||||||    
T  27471536 caccgggacacg 27471525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38503297 - 38503428
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacg 100  Q
    ||||||||||| ||| ||||| || |||||||||||||| |||||||||| ||  |||||| ||||| ||| |||| ||||| |||||  ||| |||| |    
T  38503297 catgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcg--gtcggacatg 38503394  T
Q  101 acacatgtccgacaccgggacacgtctaatccga 134  Q
    ||||||||| ||| | |||||||  |||||||||    
T  38503395 acacatgtctgacgcagggacacacctaatccga 38503428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 43492504 - 43492450
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagag 138  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  43492504 tgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatccgaagag 43492450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 34371716 - 34371843
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtcc--gacaccgggacac 123  Q
    |||||||||||||| ||||||||||||| ||||||| ||||| ||| |||| ||||| ||| |||||| || ||||||| |||||   | |||| |||||    
T  34371716 caccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtccaatataccgagacac 34371814  T
Q  124 gtctaatccgaagagtgttcgtgcttcat 152  Q
    ||| ||||| || |||||| |||||||||    
T  34371815 gtcaaatccaaaaagtgtttgtgcttcat 34371843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 44482234 - 44482311
Alignment:
Q  28 ccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacaca 105  Q
    ||||| |||||| ||||||||||||| ||||||| ||||| ||| |||| ||||| |||||||||| |||||||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacaca 44482311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 1815306 - 1815362
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtg 140  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| || |||||    
T  1815306 tgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtg 1815362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 38078671 - 38078603
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||||| | ||||| ||||||| ||||||||| |||| ||||||||||||    
T  38078671 tgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcat 38078603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 29163391 - 29163321
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 154  Q
    |||||||||| |||||||||| || | |||||||||||||| |||||| ||  ||||||||||||||||||    
T  29163391 tgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcattg 29163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 16164366 - 16164257
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| || |||||||||| ||| | | ||||| ||| ||||| |||| ||| |||||  ||| | |||| ||||||||||| ||||||| ||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatc 16164267  T
Q  132 cgaagagtgt 141  Q
    ||||||||||    
T  16164266 cgaagagtgt 16164257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 17831601 - 17831485
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagaca-cgacacatgtccg 111  Q
    ||||||||  || |||||||||||||| ||||||||||||| ||||||| ||||  ||| ||||   ||| |||| ||||| |||| |||||  ||||||    
T  17831601 actgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtc---gtcgtgtcagtgtcggacaccgacatgtgtccg 17831505  T
Q  112 acaccgggacacgtctaatc 131  Q
    ||||||||||||| ||||||    
T  17831504 acaccgggacacgcctaatc 17831485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 42359459 - 42359390
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    |||||||||| |||| |||   ||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  42359459 tgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatt 42359390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 52284764 - 52284809
Alignment:
Q  86 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||||||||||||||||||||||||||  |||||||||||||    
T  52284764 tcggtgtcagacacgacacatgtccgacaccaagacacgtctaatc 52284809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 9690267 - 9690215
Alignment:
Q  100 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| ||||||||||||||||||| |||||||| |||||||| |||||||||    
T  9690267 gacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcat 9690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 46348393 - 46348325
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| |||||||||||| |||||| || |||||| | |||| ||||||||||    
T  46348393 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcat 46348325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 51410074 - 51410142
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| | |||||||||| |||||| ||||||| | |||| ||||||||||||    
T  51410074 tgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcat 51410142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 20157429 - 20157346
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtc 87  Q
    |||||||  |||||||||||| |||||||||||||  ||||||||||||| ||||||| ||||  ||| |||| ||||| ||||    
T  20157429 gacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtc 20157346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 34298416 - 34298479
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    |||||||| ||||||||| || |||| ||||||||| ||||||||||||| ||||||| |||||    
T  34298416 gacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatt 34298479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 2896199 - 2896121
Alignment:
Q  5 acacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtca 83  Q
    ||||||| ||||||||  || |||||||||||||| ||||||||||||| ||||||| ||  | |||||||| ||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtca 2896121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 17754301 - 17754439
Alignment:
Q  14 ctgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgac 113  Q
    |||||||| || |||||||||||||| || ||||| |||| ||||||| ||| | ||| |||||||||  |||||||||  ||||| ||| |||||  ||    
T  17754301 ctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacatatgtctaac 17754400  T
Q  114 accgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||| |  ||||  || ||| | |||||||||||||||||    
T  17754401 accagagcacggatagtccaaggagtgttcgtgcttcat 17754439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 18556461 - 18556387
Alignment:
Q  78 gtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| || ||||||||||| |||||| | |||||||| |||||||| |||||||||  ||||| ||||||||||    
T  18556461 gtgtcgtgacggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcat 18556387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 22881611 - 22881569
Alignment:
Q  110 cgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||||||| |||||| ||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 22881569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 25934634 - 25934744
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||||  || |||| ||||| ||| |||| || || |||||||||| |||||||||| |||| ||||| |||| ||| || |||| | ||||||    
T  25934634 agaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgt 25934733  T
Q  142 tcgtgcttcat 152  Q
     ||||||||||    
T  25934734 ccgtgcttcat 25934744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 29144368 - 29144322
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  29144368 tgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcat 29144322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 46940796 - 46940750
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  46940796 tgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcat 46940750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 17778617 - 17778670
Alignment:
Q  99 cgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| ||||||||||||||||| | |||||||||  ||||||||||||||||    
T  17778617 cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 18190118 - 18190061
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    ||||| |||||||||| |||| ||||||||||||||||||  ||||||||| ||||||    
T  18190118 tgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 26238169 - 26238078
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggac 121  Q
    |||||||||||||| |||||||| |||| ||||||| ||| | ||| ||||||||   |||||||||| ||||| |||| |||||||| |||||||    
T  26238169 caccgctaataatttgagaaaataacataattcagtgtaa-tatatgtgtcagtg---tgtcggtgtcggacacaacacgtgtccgactccgggac 26238078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 34741899 - 34741963
Alignment:
Q  88 ggtgtcagacacgaca-catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| ||||||||| | |||||||||| |||||||| |||||||||||||||| ||||||||||    
T  34741899 ggtgtctgacacgacaacgtgtccgacac-gggacacgcctaatccgaagagtgtccgtgcttcat 34741963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 7918263 - 7918207
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtc 87  Q
    ||||||||| ||||||||||||| ||||||| ||||| ||| |||||||||| ||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 15765795 - 15765875
Alignment:
Q  73 tgtcagtgtcatgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||||  | |||   |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  15765795 tgtcagtgtcttgtcggtgtcagatgccgacgtgtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcat 15765875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 16297287 - 16297223
Alignment:
Q  88 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| ||||||||   ||||||||||| ||||||| ||||||||| |||||| ||||||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 33202956 - 33203020
Alignment:
Q  88 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||| |||| |||||||||| |||||| ||||||||| |||| |  |||||||||    
T  33202956 ggtgtcagacacgatacatatccgacaccgtgacacgcctaatccgaggagtatatgtgcttcat 33203020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 398844 - 398781
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    |||||||| ||||||||  || |||||||||||||| || |||||||||| ||||||| |||||    
T  398844 gacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 21038086 - 21038161
Alignment:
Q  27 accgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgac 102  Q
    |||||||||||||  ||||||| |||| ||||||| ||||  |||  ||||||||| |||||||||| ||||||||    
T  21038086 accgctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacacgac 21038161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 36878450 - 36878504
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    ||||||||  || |||||||||||||| ||||||||||||| ||||||| |||||    
T  36878450 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 36878504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 40181922 - 40181976
Alignment:
Q  86 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtg 140  Q
    |||||||| ||||| |||| ||||| ||||||||||||| ||||||||| |||||    
T  40181922 tcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 52903317 - 52903363
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||| || || |||||||||| ||||||||||    
T  52903317 tgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcat 52903363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 2896132 - 2896083
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 132  Q
    |||||||||||||||||||||  ||||||| ||||||||||  |||||||    
T  2896132 atgtcggtgtcagacacgacatgtgtccgagaccgggacacacctaatcc 2896083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 6612222 - 6612113
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| || ||||| |||| ||||||| |||||  |  |||| ||||| ||||| |||| ||||||| |  ||||||||||| ||||||| ||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatc 6612123  T
Q  132 cgaagagtgt 141  Q
    | | ||||||    
T  6612122 caaggagtgt 6612113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 12443537 - 12443476
Alignment:
Q  6 cacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    ||||||||| |||||  || ||| |||||||||| ||||||||||||| ||||||| |||||    
T  12443537 cacggatacggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 12919005 - 12919062
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||| ||||| |||||||| || ||||||  ||||||||||||||||    
T  12919005 gacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcat 12919062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 17408730 - 17408819
Alignment:
Q  63 taattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||||| ||||  ||| ||| ||||||||||||| |||||||||||  || ||  |||||| |||||||||  |||||||||    
T  17408730 taattatatatgtcggtgttgtgttggtatcagacacgacacgtgtccgacaccaagatacacctaatctgaagagtgtctgtgcttcat 17408819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 19637817 - 19637890
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 157  Q
    |||||||||| ||||||| |||| |||||||||||||| |  ||||||||| |||| || |||| |||| ||||    
T  19637817 tgtcggtgtcggacacgatacatatccgacaccgggacgcccctaatccgaggagtatttgtgcatcatagata 19637890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 27966011 - 27965942
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||||||||| | | || | |||||||||||||| ||||||||| |||||| | ||||||||    
T  27966011 atgtccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 27965942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 28674802 - 28674851
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgt 75  Q
    ||||| |||||||| |||||||| |||| ||||||||||||| |||||||    
T  28674802 caccgttaataatttgagaaaattacataattcagtataattatatatgt 28674851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 48148076 - 48147967
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttc 143  Q
    ||||||| || ||||||| ||||| |||||||| ||||| ||| | | ||  |||||||  ||||  |||||||||||||| ||||||  ||||||| |     
T  48148076 aaaatcatataattcagtgtaattatatatgtcggtgtcgtgttgatatcgaacacgacgtatgtatgacaccgggacacgcctaatctaaagagtggtt 48147977  T
Q  144 gtgcttcatt 153  Q
    ||||||||||    
T  48147976 gtgcttcatt 48147967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15641112 - 15641052
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagt 61  Q
    ||||||||||| |||||||   || ||| ||||||||||  ||||||||||||||||||||    
T  15641112 catgacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagt 15641052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16812520 - 16812580
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagt 61  Q
    ||||||||||| ||||||||| || ||||  |||||||| || |||||||||| |||||||    
T  16812520 catgacacggacactgacacaccgacaccaataataatttgacaaaatcacataattcagt 16812580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 21530738 - 21530778
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacg 124  Q
    |||||||||| |||||||||||||||||||||  |||||||    
T  21530738 tgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 26830641 - 26830701
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 149  Q
    ||||||||||| |||| ||| ||| ||||||||||| |||||| || |||||| |||||||    
T  26830641 gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 32308109 - 32308248
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccga 112  Q
    ||||||||  || |||||||||||||| ||||||||||||| ||||||| ||||| ||| |||||||||| |||||||||  ||||||||||||||||||    
T  32308109 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccga 32308208  T
Q  113 caccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||  ||||||||| |||||||| ||||||||    
T  32308209 caccgagacacagctaatccgaggagtgttcatgcttcat 32308248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 24339648 - 24339770
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    |||||||||| || |||||||||| ||||||| |||||  |  |||| ||||| |||||||||| |||||||||| | ||||||||||||||||| ||||    
T  24339648 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaa 24339747  T
Q  130 tccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||  ||||||||||    
T  24339748 tccgaggagtgcccgtgcttcat 24339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 598257 - 598325
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||| ||||||||||    
T  598257 tgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 598325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 43027469 - 43027406
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcat 43027406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 11665492 - 11665371
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| || |||||||||| ||||||| ||||| ||  ||||  |||||||||||||||  ||||||||| ||||||||||||  |||| ||||||    
T  11665492 ctaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacacatctaat 11665393  T
Q  131 ccgaagagtgttcgtgcttcat 152  Q
     ||| || ||| ||||||||||    
T  11665392 acgaggaatgtccgtgcttcat 11665371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 19206052 - 19206157
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| ||||||||||||| ||||| ||||||| ||| |||| ||||| ||| ||||||||| | ||||||| || |||||||| | |||     
T  19206052 caccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtcttgttggtgtcagagatgacacatatctgacaccggaatacgg 19206151  T
Q  126 ctaatc 131  Q
    ||||||    
T  19206152 ctaatc 19206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 26033514 - 26033389
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    |||||||||| || |||||||||| ||||||| |||||  |  |||| || || ||||||||||||||| ||||| ||||||| |||| |||||  ||||    
T  26033514 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaa 26033415  T
Q  130 tccgaagagtgttcgtgcttcattga 155  Q
    ||||| |||||| |||| ||||||||    
T  26033414 tccgaggagtgtccgtgtttcattga 26033389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 7438714 - 7438834
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| || |||||||||| ||||| | |||||  |  |||| ||||||||||||||||| ||||||||||||| ||||||  ||||||| |||||     
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaatt 7438813  T
Q  132 cgaagagtgttcgtgcttcat 152  Q
    | | |||||| ||||||||||    
T  7438814 caaggagtgtccgtgcttcat 7438834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 15680858 - 15680926
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||| ||| |||||| ||||||||||    
T  15680858 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcat 15680926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 21880201 - 21880269
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||||||  ||||| ||||||||||    
T  21880201 tgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcat 21880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 33994261 - 33994329
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||| |||||    
T  33994261 tgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcat 33994329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 5409836 - 5409773
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 5409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 21831828 - 21831903
Alignment:
Q  77 agtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||| ||||||||||||| ||||| || |||| ||||||||  |||||||||| ||||||||    
T  21831828 agtgtcatgtcggtgtcaaacacgacacatgtgcgacatcgagacaagtctaatcttaagagtgttcatgcttcat 21831903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 1433434 - 1433576
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| | ||||||  || ||||| |||||||| ||||||||||||| |||  || ||||| ||| |||| ||||| ||||||      ||| ||||    
T  1433434 gacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcgg------acaagaca 1433527  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
      ||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  1433528 tgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcat 1433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 21864857 - 21864925
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||| ||| ||||||  |||||||||    
T  21864857 tgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcat 21864925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 32094020 - 32093956
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccggg-acacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcat 32093956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 9408385 - 9408264
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| || |||||||||| ||| ||| |||||  |  |||| ||||| | |||||||||||||||| | || |||||||||   ||||| ||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacgatatatatccgacaccaaaacacgcctaatc 9408286  T
Q  132 cgaagagtgttcgtgcttcatt 153  Q
    |||||| ||| |||||||||||    
T  9408285 cgaagaatgtccgtgcttcatt 9408264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 2334270 - 2334377
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttc 143  Q
    |||||||||| ||| ||| |||||  |  |||| ||||| ||||| |||| ||||||||||||||||||||| |  ||||||||||||||| |||||| |    
T  2334270 aaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtcg-tgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtcc 2334368  T
Q  144 gtgcttcat 152  Q
    ||| |||||    
T  2334369 gtgtttcat 2334377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 13770750 - 13770810
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 149  Q
    ||||| ||||| |||| ||||||||||||| ||||| |||||||||||||||| |||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 20549780 - 20549908
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccga 112  Q
    ||||||||| || |||||||||||||| ||||||||||| | ||||||| |||  |||||||         |||||||||| ||||| ||||||||||||    
T  20549780 actgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaa--ttatatg---------tgtcggtgtcggacacaacacatgtccga 20549868  T
Q  113 caccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||  | |||||| ||||||||| |||||  ||||||||||    
T  20549869 caatgagacacgcctaatccgaggagtgcccgtgcttcat 20549908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 22484074 - 22484142
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||| ||||||||||||||| || |||| |||| ||||||  ||||| ||||||||||    
T  22484074 tgtcggtgtcagacatgacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcat 22484142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 32287473 - 32287405
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||| ||||  ||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  32287473 tgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 32287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 7973134 - 7973087
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  7973134 atgttggtgtgagacacgacacatgtccgacatcgggacacgtctaat 7973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 9778559 - 9778622
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| ||||| |||| ||||||||||||||||||| ||||||| | |||||| ||||||||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcat 9778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 26329433 - 26329354
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccg 111  Q
    |||||||| ||||||| ||||  ||||||| ||||| ||| |||| | ||| ||||||||||||||||||||| ||||||    
T  26329433 taataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgtccg 26329354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 26733284 - 26733347
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    |||||||| |||||||| ||| |||||||||||||| || |||||||||| ||||||| |||||    
T  26733284 gacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatt 26733347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 598185 - 598235
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcac 51  Q
    ||||||||||| |||||||||||| ||||||||||||||  ||||||||||    
T  598185 catgacacggacactgacacatcgacaccgctaataatttaagaaaatcac 598235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 10043007 - 10043041
Alignment:
Q  98 acgacacatgtccgacaccgggacacgtctaatcc 132  Q
    |||||||||||||||||||||||||||||||||||    
T  10043007 acgacacatgtccgacaccgggacacgtctaatcc 10043041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  100 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 150  Q
    ||||||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 3554517 - 3554448
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||| |||||||||||| ||  |||| | |||||||||||| ||||||||||  |||||||||    
T  3554517 atgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgtctgtgcttcat 3554448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 8234198 - 8234243
Alignment:
Q  87 cggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 132  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||    
T  8234198 cggtgtcggacacgacacatgtccgacaccgagacacgcctaatcc 8234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 9933282 - 9933364
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacac 115  Q
    ||||||||| || ||||||||||  ||||||| | ||  || |||||||||| |||||||||| ||||||||||||||| |||||    
T  9933282 ctaataatttgaaaaaatcacatatttcagtaaactt--atgtgtcagtgtcgtgtcggtgtcggacacgacacatgtctgacac 9933364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 17851411 - 17851488
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgt 81  Q
    |||| |||||| |||||||||  |||||||||||||  |||||||||||| ||||||| ||||| ||| |||| ||||    
T  17851411 gacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 15902830 - 15902922
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacg 124  Q
    |||||||| || |||||||||| ||| ||| ||||| ||| |||| ||||  ||||||| || ||||||||||||| |||| ||| |||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacacatgcccgagaccaggacacg 15902922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 20545242 - 20545186
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||| ||||||||| |||| ||| ||||||  |||||||||    
T  20545242 acacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcat 20545186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 3294300 - 3294257
Alignment:
Q  98 acgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||    
T  3294300 acgacacgtgtccaacaccgggacacgcctaatccgaagagtgt 3294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 2533823 - 2533761
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 151  Q
    |||| |||||| |||| | |||||| ||||||||||  |||||||| ||||||||||||||||    
T  2533823 gtgtaagacacaacacgtatccgacgccgggacacgcgtaatccgaggagtgttcgtgcttca 2533761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 6490787 - 6490833
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||  |||||||| |||||| ||||||||||    
T  6490787 tgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcat 6490833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 10359670 - 10359716
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||| |||||||||||||||||  |||| ||||||||||    
T  10359670 tgtccgacaccgagacacgtctaatccgaaaggtgtccgtgcttcat 10359716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 24105749 - 24105795
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||| |||| |||| ||||||| |||||||||    
T  24105749 tgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcat 24105795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 40131987 - 40131941
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||||||||| ||||||  |||||||||    
T  40131987 tgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcat 40131941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 29787426 - 29787385
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  29787426 caccgctaataatttgagaaaatcacataattcagtgtaatt 29787385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 3721099 - 3721151
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtc 82  Q
    |||||||||| ||||||||||||| ||| ||||||||| ||| |||| |||||    
T  3721099 gctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtc 3721151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 7197307 - 7197271
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccggga 120  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  7197307 tgtcggtgtcggacacaacacatgtccgacaccggga 7197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 11722177 - 11722121
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcag 60  Q
    |||||||| ||||||||  || ||||||||| |||| ||||||||||||| ||||||    
T  11722177 gacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 18035858 - 18035807
Alignment:
Q  100 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||| || ||||||||||||||| |||||| ||||||||||    
T  18035858 gacacatgtctgacac-ggaacacgtctaatccgaggagtgtccgtgcttcat 18035807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 30982938 - 30982809
Alignment:
Q  23 cgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggaca 122  Q
    ||||||||||||| ||| |||||||||||||  |||||| ||||| ||  |||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  30982938 cgccaccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggaca 30982839  T
Q  123 cgtctaatccgaagagtgttcgtgcttcat 152  Q
    || ||||||| |||||||| ||||||||||    
T  30982838 cgcctaatccaaagagtgtccgtgcttcat 30982809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 24613753 - 24613632
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| ||||||||||||| ||||| | ||| |  |  |||| ||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  24613753 ctaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaat 24613654  T
Q  131 ccgaagagtgttcgtgcttcat 152  Q
    || | |||||| ||||||||||    
T  24613653 cctaggagtgtccgtgcttcat 24613632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 22234929 - 22234821
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttc 143  Q
    |||||||||| ||||||| ||||| ||| |||| ||||| |||||||||| |||||||||| ||||||||||| ||||||  |||||||||  |||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttc 22234830  T
Q  144 gtgcttcat 152  Q
    |||||||||    
T  22234829 gtgcttcat 22234821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 36635326 - 36635447
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||| ||| |||  |||| |     ||||||||||||||||  ||| ||||||||||||||     
T  36635326 caccactaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgtga-----gtgtcagacacgacacgcgtcagacaccgggacacgc 36635420  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||| ||||||||||    
T  36635421 ctaatccgaagagtgtccgtgcttcat 36635447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 903905 - 904030
Alignment:
Q  7 acggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacat 106  Q
    ||||| ||||||||| || ||||| |||||||| ||||||||||||| ||||||| ||||| ||| | ||||| || | |||||||  |||||||||  |    
T  903905 acggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgt 904004  T
Q  107 gtccgacaccgggacacgtctaatcc 132  Q
    ||||||||| ||||||| ||||||||    
T  904005 gtccgacactgggacacatctaatcc 904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 23292996 - 23292928
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  23292996 tgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 23292928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 29205528 - 29205591
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgataa 158  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| |||||    
T  29205528 gacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatagataa 29205591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 47263992 - 47264114
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    |||||||||| |  |||||||||| |||| || |||||  | |||||  |||||||| ||||||||| |||||||||||| |||||| ||||||| ||||    
T  47263992 gctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtcatgttggtgtcagatacgacacatgtctgacaccaggacacgcctaa 47264091  T
Q  130 tccgaagagtgttcgtgcttcat 152  Q
    ||||||||| ||  |||||||||    
T  47264092 tccgaagagcgtctgtgcttcat 47264114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 12797348 - 12797282
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 150  Q
    |||||||||| ||||||| ||||||| |||||||||||| ||||||||||| || ||||||||||||    
T  12797348 tgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 715603 - 715547
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 715547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 752929 - 752873
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 752873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 12895284 - 12895216
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||  | ||||||| ||||||||| ||||||||| |||||||||||||||||    
T  12895284 tgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcat 12895216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 19312355 - 19312463
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttc 143  Q
    |||||||||||||||||| ||||| ||  | || ||||| ||||| |||| || ||||||| |||||||||||| ||||||||||||| ||  ||||| |    
T  19312355 aaaatcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtcc 19312454  T
Q  144 gtgcttcat 152  Q
    ||| |||||    
T  19312455 gtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 34306814 - 34306746
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| |||||||||||| |||||| |||||| || || ||||||||||||||    
T  34306814 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcat 34306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 14465070 - 14465007
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||| ||| |||||| ||||||||||||||| || |||||| ||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcat 14465007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 30522972 - 30522858
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||| ||| ||||||||||||| ||||||| ||| | |||||||  | |||   |||| |||| ||||||||||| || ||||||| |||||||    
T  30522972 caccgctaattatttgagaaaatcacataattcagtgtaactatatatgttgg-gtcggatcggcgtcaaacacgacacatatctgacaccgagacacgt 30522874  T
Q  126 ctaatccgaagagtgt 141  Q
    ||||||| ||||||||    
T  30522873 ctaatccaaagagtgt 30522858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 19482722 - 19482796
Alignment:
Q  78 gtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| ||||||| |  |||||||||| |||||||||| |||||||  ||||||||| |||||||||||||||||    
T  19482722 gtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcat 19482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 23861488 - 23861371
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||| | || |||||||||||||||| | ||||| |||||||         |||||||||||| |||||||||||| | ||||  ||||||     
T  23861488 caccgctaataaattgataaaatcacatgattcaatgtaattatatatgt---------gtcggtgtcagatacgacacatgtctgtcaccaagacacgc 23861398  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| | |||||||||||||||||||    
T  23861397 ctaattcaaagagtgttcgtgcttcat 23861371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 847955 - 848079
Alignment:
Q  28 ccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtct 127  Q
    |||||||||||| |||||||| |||| ||||| |||||||  |  |||| ||||| ||| |||||| ||||||| || ||||  ||||||||||||  ||    
T  847955 ccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacaccgggacacacct 848054  T
Q  128 aatccgaagagtgttcgtgcttcat 152  Q
    ||||| | |||||| |||| |||||    
T  848055 aatccaaggagtgtccgtgtttcat 848079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 28964258 - 28964190
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||| ||||| |||||||||||| |||||||| |||||||| ||||||||| |||||| | ||||||||    
T  28964258 tgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcat 28964190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 35157995 - 35157927
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||||||| ||||||| |||||  ||||||||  ||||| ||||||||||    
T  35157995 tgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcat 35157927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 38148807 - 38148656
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacg 100  Q
    |||||| |||| | |||||  ||| ||||||||||| || ||||||||||||| ||||||| |||||||| |||||  |||| ||| |||||  ||||||    
T  38148807 catgacgcggacaatgacatttcgacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacg 38148708  T
Q  101 acacatgtccgacaccgggacacgtctaatccgaag-agtgttcgtgcttcat 152  Q
    |||| | || ||||| || ||||| || || ||||| ||||||||| ||||||    
T  38148707 acacgtatctgacactggaacacgcct-attcgaagaagtgttcgtacttcat 38148656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 3947766 - 3947703
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||||||| ||||||||||| ||||||  ||||||||| |||||| ||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcat 3947703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 20743277 - 20743210
Alignment:
Q  84 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 150  Q
    ||||| |||||||||| ||||| ||||||||||||| |||| |||||||||| |||||| ||||||||    
T  20743277 tgtcgatgtcagacaccgacacgtgtccgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 4157198 - 4157268
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 154  Q
    |||||||||| ||||||||||||||||||||||| || ||  ||||| ||| ||||||  |||||||||||    
T  4157198 tgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcattg 4157268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 4157485 - 4157555
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 154  Q
    |||||||||| ||||||||||||||||||||||| || ||| ||||| ||| ||||||   ||||||||||    
T  4157485 tgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcattg 4157555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 5832760 - 5832638
Alignment:
Q  17 acacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacacc 116  Q
    |||| ||| ||| |||||||||| |||||||||| |||||| |||||| || | | |||  ||||  |||| | ||||||||||||||  |||||||||     
T  5832760 acacgtcgacactgctaataatttgagaaaatcatatgatttagtatagttatttgtgttggtgtagtgtctgcgtcagacacgacacgagtccgacact 5832661  T
Q  117 gggacacgtctaatccgaagagt 139  Q
      |||||||||||||||| ||||    
T  5832660 aagacacgtctaatccgatgagt 5832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 4383375 - 4383447
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacac 104  Q
    ||||||||| || |||||||||| ||||||| |||||  | ||||||||||| ||||||||||| |||||||||    
T  4383375 ctaataatttga-aaaatcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacac 4383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 8423729 - 8423660
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||| |||||||||  ||||||||||||||||||| |||||| ||  ||||| ||||| ||||    
T  8423729 atgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcat 8423660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 21945552 - 21945609
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||| |||| ||||||||||||||||||  ||||| ||||||||| ||||||    
T  21945552 tgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgt 21945609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 35161096 - 35161153
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||||||||||| ||||  |||||||||| ||||| ||||||||||    
T  35161096 gacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcat 35161153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 37203324 - 37203369
Alignment:
Q  107 gtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcat 37203369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 46715461 - 46715416
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 151  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  46715461 tgtccgacaccggcacatgtctaatccgaggagtgttcgtgcttca 46715416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 49431075 - 49431132
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||| |||||||||| ||||| ||||||||||||| || |||||| ||||||    
T  49431075 tgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgt 49431132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 3064926 - 3064870
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||| | | |||||| ||||||||| |||||| ||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcat 3064870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8423775 - 8423719
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtc 82  Q
    |||||||||||||| ||||||||||||| ||||||| ||||| || ||||| |||||    
T  8423775 caccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtc 8423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 16073443 - 16073511
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||||| |||||||||||||   |||||| ||||||||| |||||| | ||||||||    
T  16073443 tgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcat 16073511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 29205493 - 29205533
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacg 124  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  29205493 tgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 44081565 - 44081509
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||| ||| |||||| | |||| |||||||| ||||||||||||||||||||    
T  44081565 acacgacacgtgttcgacactgagacatgtctaatctgaagagtgttcgtgcttcat 44081509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 152
Target Start/End: Complemental strand, 7214523 - 7214468
Alignment:
Q  97 cacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||||||| | | ||||||||| || |||| |||||||||    
T  7214523 cacgacacatgtccgacaccgggaaatgcctaatccgatgattgtttgtgcttcat 7214468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 21873356 - 21873309
Alignment:
Q  100 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgc 147  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  21873356 gacacgtgtccgacaccgggacacgtctaatccaaggagtgtttgtgc 21873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 21929217 - 21929170
Alignment:
Q  100 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgc 147  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  21929217 gacacgtgtccgacaccgggacacgtctaatccaaggagtgtttgtgc 21929170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 22440679 - 22440616
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    |||| ||| ||||| |||||| ||||| |||||||| ||||||||||||| ||||||| |||||    
T  22440679 gacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaatt 22440616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 24343555 - 24343630
Alignment:
Q  78 gtgtcatgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||||||| ||||| ||| | ||||||||||||||||||| ||| || || |||||| ||||||||||    
T  24343555 gtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcat 24343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 5414213 - 5414103
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||||  || |||| ||||| ||| | || ||||| |||| ||||| |||||||||| |||| ||||| |||||||  || |||| | ||||||    
T  5414213 agaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgt 5414114  T
Q  142 tcgtgcttcat 152  Q
     ||||||||||    
T  5414113 ccgtgcttcat 5414103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 21658871 - 21658797
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacg 100  Q
    |||| ||||||||| ||||||||||||| ||| | ||||||||||  |||| || ||||||| ||||| ||||||    
T  21658871 caccactaataatttgagaaaatcacataatttactataattttaagtgtcggtttcatgtcagtgtcggacacg 21658797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 30094084 - 30094126
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 148  Q
    |||| |||||||||||||| |||||||||||||||| ||||||    
T  30094084 tgtcggacaccgggacacgcctaatccgaagagtgtccgtgct 30094126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 482237 - 482180
Alignment:
Q  100 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 157  Q
    ||||| |||| |||||| | ||||||||||||||| |||||| | |||||||||||||    
T  482237 gacacgtgtctgacacctgaacacgtctaatccgatgagtgtccatgcttcattgata 482180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 21345544 - 21345475
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||| |||| ||| ||||||| ||| | ||||||||| |||| |  |||||||||    
T  21345544 atgtcggtgtcagacacgatacatatccaacaccggtacatgcctaatccgaggagtatgtgtgcttcat 21345475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 30103367 - 30103310
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    ||||||||||| |||||||| ||||| |||| | |||||| |||||||||| ||||||    
T  30103367 tgtcggtgtcaaacacgacatatgtctgacatcaggacacatctaatccgaggagtgt 30103310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 30299009 - 30299046
Alignment:
Q  115 ccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  30299009 ccgggacacgtctaatccgaggagtgtccgtgcttcat 30299046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 30327877 - 30327914
Alignment:
Q  115 ccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  30327877 ccgggacacgtctaatccgaggagtgtccgtgcttcat 30327914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 35723455 - 35723374
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaat-cacatgattcagtataattttatatgtcagtgtcatgtcggtgtc 93  Q
    ||||||||  || |||||||||||||| |||||||| ||||| ||||| | ||||| ||| |||||||||| | ||||||||    
T  35723455 actgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgtatcggtgtc 35723374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 36409502 - 36409469
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaa 129  Q
    ||||||||||||||| ||||||||||||||||||    
T  36409502 acacgacacatgtcctacaccgggacacgtctaa 36409469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 36423668 - 36423635
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaa 129  Q
    ||||||||||||||| ||||||||||||||||||    
T  36423668 acacgacacatgtcctacaccgggacacgtctaa 36423635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 40179645 - 40179596
Alignment:
Q  85 gtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccga 134  Q
    ||||||||| |||||||||||||| |||||||  |||||| |||||||||    
T  40179645 gtcggtgtcggacacgacacatgttcgacaccatgacacgcctaatccga 40179596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 53381601 - 53381532
Alignment:
Q  84 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||| ||| | | ||||||||||||||||  ||||||||| |||||| ||||||||||    
T  53381601 tgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 53381532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 5775409 - 5775353
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcg 88  Q
    |||||||| ||||||||||||| ||| ||| ||||| ||| |||| |||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcatgtcg 5775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 12884401 - 12884349
Alignment:
Q  100 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| ||| ||||| |||| |||||||||||||| |||||| ||||||||||    
T  12884401 gacacgtgttcgacatcggggcacgtctaatccgaggagtgtccgtgcttcat 12884349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 22651956 - 22652104
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||||||  || ||| |||||||||| || |||||||||| ||||| |||||||  |  |||| ||||| |||||||||| |||||||||    
T  22651956 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 22652055  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
      ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  22652056 tgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 22652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 29510383 - 29510235
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||||||  || ||| |||||||||| || |||||||||  |||||||||||||  |  |||| ||||  |||||||||| ||||||||     
T  29510383 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacg 29510284  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | ||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  29510283 cgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 29510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 29447467 - 29447572
Alignment:
Q  47 atcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtg 146  Q
    ||||||| ||| ||| ||||| ||| |||  ||||| ||||||||||||||||||||  ||||||||||||||||| |||||||| || |||||| ||||    
T  29447467 atcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtg 29447566  T
Q  147 cttcat 152  Q
    ||||||    
T  29447567 cttcat 29447572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 11803267 - 11803387
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    ||||||||  |||||||||||| ||||||| ||||| ||| |||  ||||  ||| |||||  || |||||||||||||||||| || ||||||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatc 11803366  T
Q  132 cgaagagtgttcgtgcttcat 152  Q
    ||| |||||| ||||||||||    
T  11803367 cgaggagtgtccgtgcttcat 11803387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 11944673 - 11944793
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| || |||||||||| | ||||| ||||| ||| |||| ||||| ||| | ||||| ||||||||  | |||||||||| |||||| ||||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacaccgagacacgcctaatc 11944772  T
Q  132 cgaagagtgttcgtgcttcat 152  Q
    ||| |||||||||||||||||    
T  11944773 cgatgagtgttcgtgcttcat 11944793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 8343322 - 8343444
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    |||||||||| || |||||||||| ||| ||| |||||  |  |||||||||| |    ||||| |||||||||| ||||||||||||||||||| ||||    
T  8343322 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaa 8343421  T
Q  130 tccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||  |||||||||    
T  8343422 tccgaagagtgtctgtgcttcat 8343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 44462205 - 44462155
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccga 134  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44462205 tgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccga 44462155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 44469738 - 44469688
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccga 134  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44469738 tgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccga 44469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 15816181 - 15816060
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| || |||||||||| ||| ||| ||||| ||  |||| ||||| ||| |||||| ||||||||||   ||||||||||||||||| |||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaat 15816082  T
Q  131 ccgaagagtgttcgtgcttcat 152  Q
    ||||  ||||| ||||||||||    
T  15816081 ccgagaagtgtccgtgcttcat 15816060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 29447162 - 29447041
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| ||||||||||||| ||||| | ||| |  |  |||| |||||||||||||||| |||||||||  |||| |||||| ||||||| |||||    
T  29447162 ctaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaat 29447063  T
Q  131 ccgaagagtgttcgtgcttcat 152  Q
    || | |||||| ||||||||||    
T  29447062 cctaggagtgtccgtgcttcat 29447041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 24362259 - 24362132
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgt-cagacacgacacatgtccgacaccgggacacg 124  Q
    |||||||||||||| |||| |||||||| ||||||| ||||| ||| ||||| |||| ||||||||| | |||||||||| |||||| |||||    |||    
T  24362259 caccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgacacgtgtccggcaccgaataacg 24362160  T
Q  125 tctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||  ||||||||| | ||||||||    
T  24362159 tctaatttgaagagtgtccatgcttcat 24362132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 2572135 - 2572016
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    ||||||||||| ||||| ||| |||  ||||||||| || |||||||||| ||| ||| |||||  |  |||| ||||| |||| ||||| |||||||||    
T  2572135 gacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgaca 2572036  T
Q  104 catgtccgacaccgggacac 123  Q
    | ||||||| ||||||||||    
T  2572035 cgtgtccgataccgggacac 2572016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 12570791 - 12570669
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    ||||||||||||||  |||||| | ||| ||| ||| ||||| |||||||  ||||  | |||||||||||||| |||| ||||||||||| |||||||     
T  12570791 caccgctaataatttaagaaaaacgcataattaagtgtaattatatatgttggtgtg-tatcggtgtcagacactacacgtgtccgacaccaggacacgc 12570693  T
Q  126 ctaatccgaagagtgttcgtgctt 149  Q
    |||||| ||||| ||| |||||||    
T  12570692 ctaatctgaagattgtccgtgctt 12570669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 5813641 - 5813707
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 150  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||  || |||||| ||||||||    
T  5813641 tgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 31557047 - 31557093
Alignment:
Q  86 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 132  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  31557047 tcggtgtcagacacgacacatgtccgacaccaggacacgcctaatcc 31557093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 33405394 - 33405330
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 148  Q
    |||||||||| ||||||||||||||| |||||| ||||||| ||||||| | |||||| ||||||    
T  33405394 tgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgct 33405330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 12570506 - 12570443
Alignment:
Q  86 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 149  Q
    |||||||||||||| |||| ||||||||||| ||||||| |||||| ||||| ||| |||||||    
T  12570506 tcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctt 12570443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 4122300 - 4122182
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| || ||||| | || ||||| | ||||| ||| |||| ||||  ||||  ||||| ||||||||| |||  |||||||| ||||||||||||    
T  4122300 taataattagataaaattatataattcattgtaattatatgtgtcggtgttgtgtcaatgtcaaacacgacacgtgttggacaccggaacacgtctaatc 4122201  T
Q  132 cgaagagtgttcgtgcttc 150  Q
    | |||||||| ||||||||    
T  4122200 caaagagtgtccgtgcttc 4122182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 8343038 - 8343084
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||    
T  8343038 tgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcat 8343084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 12402691 - 12402617
Alignment:
Q  78 gtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| ||||| ||||  |||| ||||||| |||||||||| |||||| ||||  ||||||||||||||||||||    
T  12402691 gtgtcgtgtcgatgtcgaacacaacacatgcccgacaccggaacacgtataatttgaagagtgttcgtgcttcat 12402617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 22943348 - 22943302
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  22943348 gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 22943302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 26902216 - 26902106
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||||| ||||||| ||||| ||| |||| ||||| | |  ||||| |||||||||| |||| | ||| |||||||| || ||| || ||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgt 26902117  T
Q  142 tcgtgcttcat 152  Q
     ||||||||||    
T  26902116 ccgtgcttcat 26902106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 28385073 - 28384967
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacg-ac 102  Q
    |||||||| ||||||| | || ||||| |||||||  ||  ||||| ||| ||||||| ||||| ||| |||| |||||||||| |||||||||||| ||    
T  28385073 gacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacgtac 28384974  T
Q  103 acatgtc 109  Q
    |||||||    
T  28384973 acatgtc 28384967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 926798 - 926729
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    |||||||||| ||| |||||| ||||||||||||||||| |  | |||||| |||||| |||||||||||    
T  926798 tgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcatt 926729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 14134747 - 14134816
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||| ||||||||| |||||| |||| ||||||| ||||| ||| |||||| |||| |||||    
T  14134747 atgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcat 14134816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 20679405 - 20679336
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    |||||||||||||| | |||| ||||||||||||||||||| || | |||| |||||| | |||||||||    
T  20679405 tgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcatt 20679336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 34897068 - 34897137
Alignment:
Q  7 acggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtc 76  Q
    ||||| || ||||| ||| |||||||||||||| ||||||||||||| ||||||| ||||| ||| ||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 34897137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 3951546 - 3951478
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||| |||| ||||| || ||||| ||||||| | |||| | ||||||||||    
T  3951546 tgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcat 3951478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 6065708 - 6065588
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    ||||||||| | |||||||||| || ||||||||||  ||   ||| | || ||||  |||| |||||||||||||||||||||||| |||||  ||||     
T  6065708 taataattctaaaaaatcacataatacagtataattacatgaatcaatatcgtgtcaatgtcggacacgacacatgtccgacaccggaacacgcataatt 6065609  T
Q  132 cgaagagtgttcgtgcttcat 152  Q
    | | |||||| ||||||||||    
T  6065608 caaggagtgtccgtgcttcat 6065588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 14134706 - 14134758
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtca 83  Q
    ||||||||| ||||||||||||| ||||||| ||||| |||||||| ||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtca 14134758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 27067310 - 27067233
Alignment:
Q  73 tgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| |||||||||  ||||  ||||||| ||  ||||||||||| |||||| ||||||||||    
T  27067310 tgtcagtgtcgtgtcggtgtcggacacgacatgtgtcgaacaccggaac--gtctaatccgaggagtgtccgtgcttcat 27067233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 36450760 - 36450696
Alignment:
Q  88 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| |||||||| | ||||||||||| ||||||| ||||||||| ||||||  |||||||||    
T  36450760 ggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcat 36450696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 36934650 - 36934705
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattca 59  Q
    |||||||| ||| |||| ||| ||||||||||||||||| |||||||||| |||||    
T  36934650 gacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattca 36934705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 38079049 - 38079112
Alignment:
Q  85 gtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 148  Q
    |||| |||| |||||||| |||||||||||||||| ||||| ||||| ||| ||||| ||||||    
T  38079049 gtcgatgtcggacacgacgcatgtccgacaccgggccacgtataatctgaaaagtgtccgtgct 38079112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 126357 - 126295
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtg 146  Q
    |||| ||||| |||||||||| ||||| | ||||||||||| ||||||||| |||||| ||||    
T  126357 tgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 40064033 - 40064075
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 148  Q
    |||||||||||||||||| |||||||||| |||||| ||||||    
T  40064033 tgtccgacaccgggacacatctaatccgaggagtgtccgtgct 40064075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 4673433 - 4673356
Alignment:
Q  75 tcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||| ||| | |||| |||||||| ||| ||||||||||| ||||| ||||||| | ||||||  |||||||||    
T  4673433 tcagtgtcttgttgatgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcat 4673356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 17751704 - 17751773
Alignment:
Q  84 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||| ||| |||  |||||||||||||||| ||||||||| |||||| || |||||||    
T  17751704 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcat 17751773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 17760691 - 17760760
Alignment:
Q  84 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||| ||| |||  |||||||||||||||| ||||||||| |||||| || |||||||    
T  17760691 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcat 17760760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 18407779 - 18407836
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||||  ||||||| |||||  || |||||| ||||||||||    
T  18407779 gacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcat 18407836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 949275 - 949207
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||| | || ||||||||| |||||||||| |||||  |||||| || || ||||||||||||||    
T  949275 tgtcggtgccggatacgacacatatccgacaccgagacactcctaatctgaggaatgttcgtgcttcat 949207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 3025557 - 3025609
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtc 82  Q
    |||||||||| ||||||||||||| ||||||| ||||| ||  ||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtc 3025609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 22197795 - 22197676
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtca-tgtcggtgtcagacacgacacatgtccgacaccgggacacgtcta 128  Q
    |||||||||| || ||| |||||| ||| ||| |||||  |  ||||||||||| ||||| |||| |||| ||||| |||||||||||||  |||| |||    
T  22197795 gctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtcagtgtcg-tgtcggacatgacacgtgtccgacaccggatcacgccta 22197697  T
Q  129 atccgaagagtgttcgtgctt 149  Q
    ||| || |||||| |||||||    
T  22197696 atctgaggagtgtccgtgctt 22197676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 24413569 - 24413501
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||| ||||| |||||||  | ||||| ||| |||||||||||||||||||  ||||| ||||||||||    
T  24413569 tgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcat 24413501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 29776016 - 29776109
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacac 99  Q
    |||||||| | |||||  ||| ||| |||||||||| ||||||||||| | |||||||||||  ||||||||| |||| | ||| ||||| |||||    
T  29776016 gacacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataa--ttatatgtcggtgttaagtcagtgtcggacac 29776109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 44067598 - 44067646
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 154  Q
    ||||||||||| ||||||| ||||| ||| |||||| ||||||||||||    
T  44067598 tgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcattg 44067646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 9799 - 9678
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| ||||||||||| | ||||||| ||||| ||| |||| ||||| ||| ||||||||||||||||| |||| |||| |||||||||| ||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataat 9700  T
Q  131 ccgaagagtgttcgtgcttcat 152  Q
    |||| |||||| ||||||||||    
T  9699 ccgaggagtgtccgtgcttcat 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 8039892 - 8039766
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| |||||||| | || ||||||| ||||| ||| |||| ||||| |||||||||| |||| || ||||||||||||||||||||||     
T  8039892 caccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgc 8039793  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
     ||||||||||||| |  |||||||||    
T  8039792 ttaatccgaagagtatctgtgcttcat 8039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 4987361 - 4987221
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccga 112  Q
    ||||||||  || ||| |||||||||| || |||||||||| ||||||| |||||  |  |||  ||| | |||||||||  |||||||||| |||||||    
T  4987361 actgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccga 4987262  T
Q  113 caccgggacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    |||||||||||| ||||||||| |||||| ||| |||||||    
T  4987261 caccgggacacgcctaatccgaggagtgtccgtacttcatt 4987221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 40993345 - 40993277
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||    
T  40993345 tgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcat 40993277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 15796345 - 15796225
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| || ||||||| || ||||||| |||||  |  |||| ||||| ||| |||||| ||||| |||| ||||| ||||||| ||||| ||||||    
T  15796345 taataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatc 15796246  T
Q  132 cgaagagtgttcgtgcttcat 152  Q
    | |||||||||||||||||||    
T  15796245 caaagagtgttcgtgcttcat 15796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 20503514 - 20503582
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||  ||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||    
T  20503514 tgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 20503582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 55401124 - 55401192
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| |||||||||||| |||||| ||||||||| |||||| ||||||||||    
T  55401124 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 55401192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 29508498 - 29508569
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 154  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||||| |  ||||| ||||||||||||    
T  29508498 atgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcattg 29508569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 17005676 - 17005550
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||| ||||||||| || ||||||| || ||||||| ||||| ||  |||| ||||  ||| |||||||||||  |||| |||| |||||| |||||| |    
T  17005676 caccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacct 17005577  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||| ||||||| |||||||||    
T  17005576 ctaatccgaggagtgtttgtgcttcat 17005550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 14832105 - 14832205
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    |||||||||| || |||||||||| | ||| | |||||  |  |||||||||| ||||||| || |||||||||| ||||||||||||||||||| ||||    
T  14832105 gctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaa 14832204  T
Q  130 t 130  Q
    |    
T  14832205 t 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 27505305 - 27505368
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||||||| ||||||||||||||||| | ||||||||| |||||| ||||||||||    
T  27505305 gtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcat 27505368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 28812522 - 28812632
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| ||  ||||||||| ||||||| || ||  |  |||| ||||| ||| |||||||||||||| |||||||||||| | ||||||| |||||    
T  28812522 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaat 28812621  T
Q  131 ccgaagagtgt 141  Q
    |||| ||||||    
T  28812622 ccgaggagtgt 28812632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 34185176 - 34185054
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    ||||||||||  | |||||||||  ||||||| |||||  |  |||| ||||| ||||  |||| |||| ||||  ||||||||||||||||||| ||||    
T  34185176 gctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaa 34185077  T
Q  130 tccgaagagtgttcgtgcttcat 152  Q
    ||||| |||||| ||||||||||    
T  34185076 tccgaggagtgtccgtgcttcat 34185054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 40052383 - 40052429
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  40052383 tgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcat 40052429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 16192817 - 16192728
Alignment:
Q  16 gacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacaca 105  Q
    |||||| || ||||| |||||||| |||||||| |||| ||||||| ||||| ||| |||   |||| ||||||||||||||||||||||    
T  16192817 gacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgacaca 16192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 2620128 - 2620003
Alignment:
Q  8 cggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatg 107  Q
    |||| ||||||||  || |||| ||||| ||| ||||||||||||| ||| ||| ||| |  || |||  ||||| || |||||| ||||||||||||||    
T  2620128 cggacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaact--atgtgttggtgtcgtggcggtgttagacacgacacatg 2620031  T
Q  108 tccgacaccgggacacgtctaatccgaa 135  Q
    |||| || ||||||||| ||||||||||    
T  2620030 tccggcatcgggacacgcctaatccgaa 2620003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 25775578 - 25775626
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 154  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  25775578 tgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcattg 25775626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 8789560 - 8789490
Alignment:
Q  84 tgtcggtgtcagacacga--cacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||  |||||||| ||||||| |||||| ||||||||| |||||| ||||||||||    
T  8789560 tgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcat 8789490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 25064911 - 25065031
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||| ||| || |||||||||| ||| ||| |||||  || |||  || || ||| |||||| |||||||||| |||| ||||||||||||||     
T  25064911 caccgctaatgatttgaaaaaatcacataatttagtgtaatt--atgtgttggtatcgtgttggtgtcggacacgacacgtgtctgacaccgggacacgg 25065008  T
Q  126 ctaatccgaagagtgttcgtgct 148  Q
     | |||||| |||||||||||||    
T  25065009 tttatccgaggagtgttcgtgct 25065031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 26290379 - 26290470
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacac 123  Q
    |||||||| |||||||||||||  ||| || ||||| ||| |||||||||| |  ||||||| || ||| ||||||||||||||| ||||||    
T  26290379 taataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtcgttccggtgtcggaaacggcacatgtccgacaccaggacac 26290470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 3631738 - 3631796
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgc 147  Q
    ||||| |||||||||||||||||||||| ||||||| ||| ||||| |||||| |||||    
T  3631738 gtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 8842377 - 8842451
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 157  Q
    ||||||||||||||||||||||||||  || |  | |||||| ||||||||| |||||| |||||||||| ||||    
T  8842377 atgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcatagata 8842451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 25093551 - 25093617
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 150  Q
    |||||||||| ||||| ||||||||||||||| |   ||| ||||||| ||||||||||||||||||    
T  25093551 tgtcggtgtcggacacaacacatgtccgacactgaagcacttctaatctgaagagtgttcgtgcttc 25093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 26492213 - 26492147
Alignment:
Q  86 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||| ||||||||||||||| ||||||  |||||||||||||||| || ||| || |||||||    
T  26492213 tcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcat 26492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 49651839 - 49651718
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    |||||||||| || |||||||||| ||||| | |||||  |  |||| ||||| ||||||   | |||||||||||| ||||||||||||||||  ||||    
T  49651839 gctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac-cggacacgacacatatccgacaccgggacacacctaa 49651741  T
Q  130 tccgaagagtgttcgtgcttcat 152  Q
    |||||  ||||| ||||||||||    
T  49651740 tccgagaagtgtccgtgcttcat 49651718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 34910393 - 34910434
Alignment:
Q  111 gacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  34910393 gacaccgggacacgtctaatccgaggagtgtccgtgcttcat 34910434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 37077338 - 37077487
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacac-gac 102  Q
    |||||||| | ||||||  || ||||| |||||||| ||||| || |||| ||||| |  |||  ||| ||||| |||||||||||||||  |||| |||    
T  37077338 gacacggacagtgacacgccgacaccgataataatttgagaatataacataattcaatggaatcatatgtgtcattgtcatgtcggtgtcgtacacggac 37077437  T
Q  103 acatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
     |||||||||||| |||||||  ||||||| | || ||| ||||||||||    
T  37077438 gcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcat 37077487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 5441033 - 5440969
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacac-gtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||||| |||||| ||||| | ||||| ||| |||||| ||||||||||    
T  5441033 gtgtcagacacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcat 5440969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 11252025 - 11252093
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||| |||| |||||| || ||| ||||| ||||||||| ||||||  |||||||||    
T  11252025 tgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcat 11252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 11313853 - 11313737
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcg-----gtgtcagacacgacacatgtccgacaccgggacacg 124  Q
    |||||||||| ||||||||||||| ||| ||| ||||| ||| ||| |||||| |||||     |||||||||||| ||| |||  ||||| |||||||     
T  11313853 gctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgtcgtgttagtgtcagacacgtcacgtgtttgacactgggacact 11313754  T
Q  125 tctaatccgaagagtgt 141  Q
     ||||||| ||||||||    
T  11313753 cctaatcctaagagtgt 11313737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 16000008 - 15999952
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||| ||||||||||||||||||| ||||||| | |||||| ||||| ||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcat 15999952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 13620837 - 13620786
Alignment:
Q  10 gatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagt 61  Q
    ||||||||||  ||| |||||||| ||||| |||||||||||||||||||||    
T  13620837 gatactgacatgtcgacaccgctagtaatttgagaaaatcacatgattcagt 13620786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 141
Target Start/End: Original strand, 21720843 - 21720878
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21720843 tgtccgacaccgggacacgtctaatccgatgagtgt 21720878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 45451602 - 45451641
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacac 123  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  45451602 tgtcggtgtcggacacgacacatgtccgacaccgagacac 45451641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 49505210 - 49505155
Alignment:
Q  27 accgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtc 82  Q
    ||||||||||||| ||||||||||||| ||| ||| ||||| ||| ||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtc 49505155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 1438793 - 1438847
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    ||||||||| || || |||||| |||| ||||||||||||| |||||||||||||    
T  1438793 actgacacaccgacatcgctaacaatttgagaaaatcacataattcagtataatt 1438847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 1550142 - 1550220
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacac 104  Q
    |||||||||||||| || |||||||||  ||||||| ||||| ||  |||||||||| |||| ||||  ||||||||||    
T  1550142 caccgctaataatttgaaaaaatcacactattcagtgtaattataggtgtcagtgtcgtgtcagtgttcgacacgacac 1550220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 7614466 - 7614416
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtc 82  Q
    ||||||||  |||||||||||| ||||||||||||| |||||||| |||||    
T  7614466 taataatttaagaaaatcacataattcagtataattatatatgtcggtgtc 7614416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 25074866 - 25074912
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||  ||||||||| |||||||||||||||||    
T  25074866 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcat 25074912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 7171554 - 7171607
Alignment:
Q  88 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||| |||||||||| |||||||||||| |||||| ||||||| | ||||||    
T  7171554 ggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 11665949 - 11666070
Alignment:
Q  29 cgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtcta 128  Q
    ||||||||||| || |||||||||  ||| ||| ||||| ||| |||| ||||| ||| | ||| ||||||||||| |||| || | ||| ||||| |||    
T  11665949 cgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgccta 11666048  T
Q  129 atccgaagagtgttcgtgcttc 150  Q
    || | | |||||| ||||||||    
T  11666049 attcaaggagtgtccgtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 18426997 - 18427066
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||| || ||||||| |||||| |||||||||||  |||||| || |||||| |||| |||||    
T  18426997 atgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcat 18427066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 24205029 - 24204980
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattga 155  Q
    ||||||||||| ||||||| ||||| ||| |||||| |||||||||||||    
T  24205029 tgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcattga 24204980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 28678309 - 28678378
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacac 99  Q
    ||||||||||  | |||||||||| ||| ||||||||| ||| |||| ||||| ||| ||||||||||||    
T  28678309 gctaataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcgtgttggtgtcagacac 28678378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 7928452 - 7928508
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtc 82  Q
    |||||||||||||| || |||||||||| ||||||| ||||| ||| |||| |||||    
T  7928452 caccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 7928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 8101946 - 8101894
Alignment:
Q  100 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| |||| ||||| || |||||||||||| || |||||||||||||||||    
T  8101946 gacacgtgtcggacactggtacacgtctaatctgaggagtgttcgtgcttcat 8101894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 14338494 - 14338454
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacac 123  Q
    |||||||||||||||||||||| | || |||||||||||||    
T  14338494 atgtcggtgtcagacacgacacgtatcggacaccgggacac 14338454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 263451 - 263303
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| |||||||  ||  ||| |||||||||| ||||||| ||||| ||||||| ||||| ||  |||||||||| ||||||||||||||||||||    
T  263451 gacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgaca 263352  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | ||| ||| |||  |||||| ||||||||| |||||| |||| |||||    
T  263351 cgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 3966505 - 3966631
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| ||||||||||||  ||||||| ||||| ||| |||| ||||| |||| ||||| ||||| |||  ||||| |||  |||||||||    
T  3966505 caccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgt 3966604  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||| |||||| ||||||||||    
T  3966605 ctaatccgaggagtgtccgtgcttcat 3966631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 21522730 - 21522878
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||||||  || ||| ||||||||||  | ||||| |||| ||||||| |||||  |  |||| ||||| |||||||||| |||||||||    
T  21522730 gacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgaca 21522829  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | |||||| |||||||||||| ||||||| |||||||| ||||| ||||    
T  21522830 cgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcat 21522878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 21533296 - 21533444
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||||||  || ||| ||||||||||  | ||||| |||| ||||||| |||||  |  |||| ||||| |||||||||| |||||||||    
T  21533296 gacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgaca 21533395  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | |||||| |||||||||||| ||||||| |||||||| ||||| ||||    
T  21533396 cgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcat 21533444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 7677711 - 7677833
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    |||||||||| || |||||||||| |||||||  ||||  |  |||| ||||| |||||||||| |||||| ||||||||||||||||||||||| ||||    
T  7677711 gctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaa 7677810  T
Q  130 tccgaagagtgttcgtgcttcat 152  Q
    ||||| ||| ||  |||||||||    
T  7677811 tccgaggagagtcggtgcttcat 7677833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 32767000 - 32766874
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| ||||||||| ||  ||||| | ||||| ||| |||  ||||| ||||||||||  | ||||||| ||||||||||| ||| ||||    
T  32767000 caccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgt 32766901  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| || |||||| ||||||||||    
T  32766900 ctaatctgaggagtgtccgtgcttcat 32766874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 15410527 - 15410382
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||||||  || ||||||||||||||  ||||||| | |||||||||| ||||  ||| |||  ||||  ||||| |||  || ||||||    
T  15410527 gacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgttgtgtcgatgttcgatacgaca 15410428  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 149  Q
      ||||| |||||||||||||||||| |||| ||||||||||||||    
T  15410427 agtgtccaacaccgggacacgtctaagccgaggagtgttcgtgctt 15410382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 19579682 - 19579831
Alignment:
Q  5 acacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacac 104  Q
    ||||||| ||||| ||  || ||| |||||||||| ||||||||||||| ||| |||  ||||  |  |||| ||||| |||| ||||| |||||||||     
T  19579682 acacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacat 19579781  T
Q  105 atgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 154  Q
    |||||  ||||||||||||| ||||||||| |||||| |||| |||||||    
T  19579782 atgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcattg 19579831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 7175098 - 7174954
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| |||||||||||| ||||| |||||||| ||||||||||||| |||  | |||||| ||| ||||||  || ||||| ||||| |||| |||    
T  7175098 gacacggacactgacacatcgacaccgttaataatttgagaaaatcacataatttggcataattatatgtgtcagcatcgtgtcgatgtca-acacaaca 7175000  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 149  Q
    | ||||||| |  |||||||| |||||  ||  |||||||||||||    
T  7174999 cgtgtccgataaggggacacgcctaatttgagaagtgttcgtgctt 7174954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 15382534 - 15382591
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||  |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  15382534 tgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgt 15382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 18592075 - 18592200
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    ||||||||||| ||  ||||||| |||| ||||| | ||||| ||| || | ||||| |||||||||| ||||| |||| |||| |||| |||||||||     
T  18592075 caccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtctgacatcgggacacgg 18592174  T
Q  126 ctaatccgaagagtgttcgtgcttca 151  Q
    ||||| ||| |||||| |||||||||    
T  18592175 ctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 21191066 - 21190997
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    |||||||||| ||||| |||| |||||||| |||||||||| ||||||||| |||||| |||||||||||    
T  21191066 tgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcatt 21190997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 22423891 - 22423802
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtc 93  Q
    |||||||||||||||||   | |||  ||||||||| ||||||||||||| ||||| ||||||| |||||||| ||||| ||||||||||    
T  22423891 gacacggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgtc 22423802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 30098329 - 30098454
Alignment:
Q  27 accgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtc 126  Q
    |||| |||||||| ||||||||||||| ||||| | ||||| || ||||| || ||  ||| ||||| |||||||||| |||| |||||| ||||||  |    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacc 30098428  T
Q  127 taatccgaagagtgttcgtgcttcat 152  Q
    |||||||| || ||| ||||||||||    
T  30098429 taatccgaggaatgtccgtgcttcat 30098454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 12264886 - 12264810
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgac 102  Q
    |||||||||| ||| |||||||| |||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||    
T  12264886 caccgctaattatttgagaaaattacatgattcagtgtaattatatgtgtcaatgtcatatcggtgtcagatacgac 12264810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 30502398 - 30502330
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||||||||||||||||||| |||||| | ||||||| | || ||||||||||||||    
T  30502398 tgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 30542741 - 30542673
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||||||||||||||||||| |||||| | ||||||| | || ||||||||||||||    
T  30542741 tgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 21814279 - 21814389
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||||  || |||| ||||| ||| |||| ||||| |||||||||| |||||||||| |||| | ||| |||||||| || |||| | || |||    
T  21814279 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgt 21814378  T
Q  142 tcgtgcttcat 152  Q
    |||||||||||    
T  21814379 tcgtgcttcat 21814389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 25817501 - 25817575
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacac 104  Q
    ||||||||||  | ||||||| |||||||||||| ||| ||| ||||||| |||||||||||||||||| |||||    
T  25817501 gctaataatttaaaaaaatcatatgattcagtatgattatatgtgtcagtatcatgtcggtgtcagacatgacac 25817575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 17123096 - 17123164
Alignment:
Q  83 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||  ||||||| |||||||||||| ||||||||| ||||||||| |||||| ||||||||||    
T  17123096 atgtcggtgttggacacgaaacatgtccgaca-cgggacacgcctaatccgaggagtgtccgtgcttcat 17123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 28588684 - 28588616
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||||| || |||||| |||||||  ||||||||||||||| | ||||||||    
T  28588684 tgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcat 28588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 14873527 - 14873639
Alignment:
Q  34 ataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccg 133  Q
    |||||| ||||||| ||||| ||| ||| ||||| ||| |||| ||||||||||||      || | |||| ||||| ||||||||||||| ||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcgg------acgcaacacgtgtccaacaccgggacacgcctaatccg 14873620  T
Q  134 aagagtgttcgtgcttcat 152  Q
    | |||||| ||||||||||    
T  14873621 aggagtgtccgtgcttcat 14873639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 21542079 - 21542130
Alignment:
Q  73 tgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacg 124  Q
    |||| ||||| |||||||||| |||||||||| |||||||||||||||||||    
T  21542079 tgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacg 21542130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 6401516 - 6401626
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||||  || |||| ||||| ||| |||| ||||| |||| ||||| |||||||||| |||| ||||| |||| ||| || |||| | ||||||    
T  6401516 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgt 6401615  T
Q  142 tcgtgcttcat 152  Q
     ||||||||||    
T  6401616 ccgtgcttcat 6401626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 11685941 - 11686066
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| |||||| || ||| ||| ||| ||||| ||| |||| ||||| | |||||||| |||||||||| ||||| | |||  | ||||     
T  11685941 caccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtccaaaaccaaggcacgg 11686039  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| || |||||| ||||||||||    
T  11686040 ctaatcggaggagtgtccgtgcttcat 11686066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 12641694 - 12641780
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    |||||||||| ||| |||||||||  |  |||||||||| ||| |||||||||||| |||| ||| |||||| | ||||||||||||    
T  12641694 aaaatcacataatttagtataattgcacgtgtcagtgtcgtgttggtgtcagacacaacacgtgttcgacacggagacacgtctaat 12641780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 21194122 - 21194068
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 149  Q
    ||||||||||||||| ||||||||| |||| ||||||||| |||||| |||||||    
T  21194122 gacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctt 21194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 21351898 - 21351852
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||    
T  21351898 tgtccgacactggaacacgtctaatccgaagagtgtccgtgcttcat 21351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 41091310 - 41091188
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    |||||| ||| ||||||||||||| ||||||| ||||| ||| ||||  |||| ||||  |||| ||| |||||  ||||  |||||  | |||||||||    
T  41091310 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcggacgcgacatgtgtctaacaccaaggcacgtctaa 41091211  T
Q  130 tccgaagagtgttcgtgcttcat 152  Q
    || || |||||||||||||||||    
T  41091210 tctgaggagtgttcgtgcttcat 41091188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 16304425 - 16304368
Alignment:
Q  95 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| || ||||||||| |||||||||||||||| || ||| ||||||||||    
T  16304425 gacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcat 16304368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 40131628 - 40131749
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| || |||||||||| ||||||| ||||| || || || ||||| | ||| |||||||||||||   |||| ||||  |||||||||||| |    
T  40131628 ctaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgtatcgatgtcagacacgacttgtgtctgacattgggacacgtctact 40131727  T
Q  131 ccgaagagtgttcgtgcttcat 152  Q
    || | |||||| |||| |||||    
T  40131728 ccaaggagtgtccgtgtttcat 40131749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 43001859 - 43001924
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 154  Q
    ||||| |||||||||| ||||  ||||| ||||||| ||||||||| |||||| ||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 43001924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 18421851 - 18421778
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgg----gacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    |||||| ||| ||||||||||||||||| ||||||    |||||||||||||||| ||||||  ||||||||||    
T  18421851 tgtcggcgtcggacacgacacatgtccggcaccgggactgacacgtctaatccgaggagtgtctgtgcttcatt 18421778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 19438332 - 19438388
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatttt 69  Q
    |||||||||||| || |||| |||||| ||||||||||||| ||||||| |||||||    
T  19438332 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatttt 19438388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 42893409 - 42893477
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||| |||| ||||||||||| ||||||| |||||  || |||||| | ||||||||    
T  42893409 tgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcat 42893477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 12927646 - 12927713
Alignment:
Q  16 gacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtca 83  Q
    |||||| || || ||||||||||| |||||||||| || ||| ||| ||||| |||||||||||||||    
T  12927646 gacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattatatatgtcagtgtca 12927713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 22299559 - 22299497
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    |||||||||| ||||||| || ||| ||||||||||  | ||||||||||||||||||||||||    
T  22299559 gacacggatattgacacaccgacacagctaataatttaa-aaaatcacatgattcagtataatt 22299497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 30183556 - 30183655
Alignment:
Q  31 ctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 130  Q
    ||||||||| || || ||||||| |||| || |||||  |  |||| ||||| ||| ||| ||||||||||||| |||||||||| |||||||| |||||    
T  30183556 ctaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacactgggacacgcctaat 30183655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 2436982 - 2437028
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||  |||||| ||||||||| |||||||||||||||||    
T  2436982 tgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcat 2437028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 19820376 - 19820330
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||| |||||| || |||||| ||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcat 19820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 30099048 - 30098982
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 150  Q
    |||||||||| || ||||||| |||| ||||| |||||||| || |||| | |||||||||||||||    
T  30099048 tgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 38464365 - 38464315
Alignment:
Q  102 cacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||||  ||||||||| ||||||  |||||||||    
T  38464365 cacatgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcat 38464315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 17088362 - 17088402
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtg 146  Q
    ||||||||||||||||||| ||||||||| |||||| ||||    
T  17088362 tgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 17593778 - 17593730
Alignment:
Q  27 accgctaataattcgagaaaatcacatgattcagtataattttatatgt 75  Q
    ||||||||||||| ||||||||||| | ||||||| ||||| |||||||    
T  17593778 accgctaataatttgagaaaatcacgtaattcagtgtaattatatatgt 17593730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 2438729 - 2438660
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  2438729 tgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatt 2438660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 18841023 - 18840955
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  18841023 tgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 18840955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 27286346 - 27286223
Alignment:
Q  29 cgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtcta 128  Q
    ||||||||||| || || ||||||| ||| ||| ||||| ||  ||||| |||||||||| |||| ||||||||||||||||||||||||||||  ||||    
T  27286346 cgctaataatttgataagatcacataattaagtgtaattataggtgtcaatgtcatgtcgatgtcggacacgacacatgtccgacaccgggacatatcta 27286247  T
Q  129 atccgaagagtgttcgtgcttcat 152  Q
    |||  ||||||||  |||||||||    
T  27286246 atctaaagagtgtctgtgcttcat 27286223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 44860322 - 44860448
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| ||||||||| ||| ||||||| ||||| ||| |||| ||||| ||| |||||  |||||||||  ||||||||| ||||||||      
T  44860322 caccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacac 44860421  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    ||||| ||| |||||| ||||||||||    
T  44860422 ctaattcgaggagtgtccgtgcttcat 44860448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 26769560 - 26769639
Alignment:
Q  73 tgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||| ||||||||||||| || |||||||||| |||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  26769560 tgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcat 26769639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 22084909 - 22084758
Alignment:
Q  6 cacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgt--cagtgtcatgtcggtgtcagacacgaca 103  Q
    ||||||||| ||||||||  ||||| |||||||| |||||||||| || ||||||| |||||||||||||  | || || |||| ||||| ||||| |||    
T  22084909 cacggatacggacacatcaacaccgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaaca 22084810  T
Q  104 catgtccga---caccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | |||| ||   |||||||||||| ||||||||| ||||||  |||||||||    
T  22084809 cgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcat 22084758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 152
Target Start/End: Original strand, 37419752 - 37419871
Alignment:
Q  33 aataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 132  Q
    ||||||| || |||||||||  ||||||| |||||  |  || | ||||| |||||||||| |||||||  | ||||||||||||||||||| |||||||    
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatcc 37419851  T
Q  133 gaagagtgttcgtgcttcat 152  Q
    || |||||| ||||||||||    
T  37419852 gaggagtgtccgtgcttcat 37419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 11223916 - 11223795
Alignment:
Q  30 gctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa 129  Q
    ||||||| || || ||||| |||| ||||||| |||||  |  |||| ||||||||| |||||| |||||||||| |||| |||||||||||||| ||||    
T  11223916 gctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaa 11223818  T
Q  130 tccgaagagtgttcgtgcttcat 152  Q
    || || |||||| ||||||||||    
T  11223817 tctgaggagtgtccgtgcttcat 11223795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 34785061 - 34784908
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||||||| || |||  |||||  ||  |||||||||||| ||| ||| ||||| ||| |||| ||||| ||||||| || |||||||||    
T  34785061 gacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgaca 34784962  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 157  Q
    | |||| ||||| |||||||| || || ||| ||||||  ||||||||| ||||    
T  34784961 cctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcatagata 34784908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 15972922 - 15972990
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| |||||||| |||||||||  |||||||||||| ||| ||||||||||    
T  15972922 tgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcat 15972990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 17776595 - 17776714
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    ||||||||  |||||| ||||| | ||||| ||||| ||| ||||||||||| ||||||||  ||||||||   ||||||||  ||||||| | ||||||    
T  17776595 taataatttaagaaaaccacataagtcagtgtaattatatgtgtcagtgtcaagtcggtgttggacacgacgtgtgtccgacctcgggacaggcctaatc 17776694  T
Q  132 cgaagagtgttcgtgcttca 151  Q
    ||| |||||| |||||||||    
T  17776695 cgaggagtgtccgtgcttca 17776714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23718003 - 23718078
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtc 76  Q
    ||||||||||| ||||||||| || |||||||||||||| |||||| |||||| ||||||| ||||| ||| ||||    
T  23718003 catgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 23718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24105675 - 24105750
Alignment:
Q  1 catgacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtc 76  Q
    ||||||||||| ||||||||| || |||||||||||||| |||||| |||||| ||||||| ||||| ||| ||||    
T  24105675 catgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 24105750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 4207859 - 4207984
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||| ||||||||| || |||| | ||| ||| ||| ||||| ||| |||| || || |||||||||| |||||||||| ||| ||||||||  ||||||    
T  4207859 caccactaataatttgaaaaaagcgcataatttagtgtaattatat-tgtcggtatcgtgtcggtgtcggacacgacacgtgttcgacaccgaaacacgt 4207957  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
     ||||||||||||||||| || |||||    
T  4207958 ttaatccgaagagtgttcatgtttcat 4207984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 21782888 - 21782746
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttata----tgtcagtgtcatgtcggtgtcagacacgacacatgt 108  Q
    ||||||||  || ||| |||||||||| ||||||||||||| ||||||| ||||| | |     |||| ||||  ||| |||||||| |||||||| |||    
T  21782888 actgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattatgtgccggtgtc-gtgttgtgttggtgtcaggcacgacacgtgt 21782790  T
Q  109 ccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    || |||||||||||||||||||| |  |||||| ||||||||||    
T  21782789 ccaacaccgggacacgtctaatctgtggagtgtccgtgcttcat 21782746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 24975382 - 24975257
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgt 125  Q
    |||||||||||||| |||||||||  || ||||||| ||| | |||  ||| ||||| |||| ||||||||||| |||  |||||||||| ||||||  |    
T  24975382 caccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagacac-acatgtgtccgacactgggacaaat 24975284  T
Q  126 ctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| || |||||| ||||||||||    
T  24975283 ctaatctgaggagtgtccgtgcttcat 24975257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 36096416 - 36096306
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    |||||||||||  || |||| ||||| ||| |||| ||||| ||||| |||| |||||||||| |||| ||||| |||||||| || | || ||||||||    
T  36096416 agaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgt 36096317  T
Q  142 tcgtgcttcat 152  Q
     ||||||||||    
T  36096316 ccgtgcttcat 36096306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 38117165 - 38117101
Alignment:
Q  88 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| ||||| |||| ||||||||||||||||||| ||||||||| | |||| ||||||||||    
T  38117165 ggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcat 38117101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 15907912 - 15907853
Alignment:
Q  93 cagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||| ||||||||||||||||| | |||| || |||||| ||||||||||    
T  15907912 cagacacgacacatatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcat 15907853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 15909618 - 15909572
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||    
T  15909618 tgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcat 15909572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 35449561 - 35449626
Alignment:
Q  89 gtgtcagacacgacacatgtccgacaccgggacacg--tctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||||||||||| | |||||  |||||||||| ||||||  |||||||||    
T  35449561 gtgtcagacacgacacatgtccgacaccagaacacgtctctaatccgaggagtgtctgtgcttcat 35449626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 19942314 - 19942383
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    |||||||||| |||||| ||  |||| |||||||||||||| ||||||||| |||||| | |||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcatt 19942383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 36756423 - 36756274
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    ||||| || |||||||| ||| |||  ||||||||| ||  |||| |||| ||||||| ||||| ||  |||| ||||| |||  |||||  |||| |||    
T  36756423 gacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaaca 36756324  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 153  Q
    ||||||||||||||  ||||| ||||||| | ||||||  ||||||||||    
T  36756323 catgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcatt 36756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 5367241 - 5367289
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 132  Q
    |||||||||| |||||||||||| |||||| |||||||||| |||||||    
T  5367241 tgtcggtgtcggacacgacacatatccgactccgggacacgcctaatcc 5367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 18889646 - 18889550
Alignment:
Q  28 ccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagaca-cgacacatgtccgacaccgggacac 123  Q
    |||||||||| | ||||||||||||| ||||||| ||||  ||| |||| ||||| |||  ||||| |||| |||| ||||||||||||| ||||||    
T  18889646 ccgctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacccggacac 18889550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 27084315 - 27084375
Alignment:
Q  81 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 141  Q
    ||||||||||||| |||||||||| ||||| |||||| |||||| |||||| || ||||||    
T  27084315 tcatgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgt 27084375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 31808066 - 31808134
Alignment:
Q  13 actgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgt 81  Q
    ||||||||| || ||||||||||||||  | |||||||||| ||||||| ||||| ||| |||||||||    
T  31808066 actgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 37559026 - 37559094
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||  ||||| ||||||||||||| |||||  |||||||| |||||| ||||||||||    
T  37559026 tgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcat 37559094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 21091772 - 21091839
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 151  Q
    |||| |||||||||| | ||| |||| |||||||||||||  ||| |||||||||||| |||||||||    
T  21091772 tgtcagtgtcagacaagccacctgtcggacaccgggacacacctattccgaagagtgtccgtgcttca 21091839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 21616742 - 21616805
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    |||||||| || |||||  || |||||||||||||| ||||||||||||| ||||||| |||||    
T  21616742 gacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 21616805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 10535733 - 10535687
Alignment:
Q  106 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||| |||||| ||||||| ||||||||| |||||||||||||||||    
T  10535733 tgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 10535687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 19959881 - 19959943
Alignment:
Q  90 tgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||  |||||||||||| ||| |||||||||| |||||| |  |||||||||    
T  19959881 tgtcagacacgacaagtgtccgacaccgagacgcgtctaatccaaagagtatcggtgcttcat 19959943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 25846742 - 25846784
Alignment:
Q  25 ccaccgctaataattcgagaaaatcacatgattcagtataatt 67  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||    
T  25846742 ccaccactaataatttgagaaaatcacatgattcagtgtaatt 25846784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 2331802 - 2331900
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 131  Q
    |||||||| ||||||||||||| ||||||| ||  ||||| |||| ||||| |||| ||||| | |||  ||| |||| |||||| ||||||| ||||||    
T  2331802 taataatttgagaaaatcacataattcagtgta--tttatgtgtcggtgtcgtgtcagtgtcgggcacagcacgtgtctgacaccaggacacgcctaatc 2331899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 37497169 - 37497238
Alignment:
Q  84 tgtcggtgtcagaca-cgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||||||||| |||||||||| || |||||||||| | ||||||| |  ||||| ||||||||||    
T  37497169 tgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcat 37497238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 4882774 - 4882670
Alignment:
Q  5 acacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacac 104  Q
    |||| ||||||||||| |||  ||||||||| ||| || ||||| | || ||||||| |||||  |  ||||  |||| |||||||||||||||||| ||    
T  4882774 acacagatactgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacgatac 4882675  T
Q  105 atgtc 109  Q
    |||||    
T  4882674 atgtc 4882670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 20242737 - 20242669
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| ||||| |||| |||| |||||  ||||||| || |||||||||||||  |||||||||    
T  20242737 tgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcat 20242669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 30404860 - 30404792
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| ||| |||||||||||||||||||||| ||||| | |||||| ||  || ||| |||||||||    
T  30404860 tgtcggcgtcggacacgacacatgtccgacaccaggacatgcctaatctgagaagcgtttgtgcttcat 30404792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 34993980 - 34993924
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||||  |||||||||| |||||||| ||||| | | |||||||||||||||||    
T  34993980 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcat 34993924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 241574 - 241722
Alignment:
Q  4 gacacggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgaca 103  Q
    |||||||| ||||||||  || ||| |||||||||| |  |||||||||| ||| ||| ||||| |   |||| ||||| ||| |||||| |||||||||    
T  241574 gacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgaca 241673  T
Q  104 catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    | ||||||||||||||||||| |||||||||  ||||| ||||||||||    
T  241674 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 241722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 53183 - 53288
Alignment:
Q  27 accgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtc 126  Q
    ||||| ||||||| ||||||||||||| ||||||| ||||| ||  |||| ||| | |||||||||| |||| ||||| ||||||||||||||||||||     
T  53183 accgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtt 53282  T
Q  127 taatcc 132  Q
    ||||||    
T  53283 taatcc 53288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 3888 - 3780
Alignment:
Q  44 aaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttc 143  Q
    |||||||||| ||||||| |||||  |  |||||||||| ||| |||||| |||||||||||||||||||| || |||||| ||||||||| |||||| |    
T  3888 aaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtcc 3789  T
Q  144 gtgcttcat 152  Q
     ||||||||    
T  3788 ttgcttcat 3780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 71774 - 71853
Alignment:
Q  73 tgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| ||||| |||| ||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  71774 tgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcat 71853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 92790 - 92939
Alignment:
Q  7 acggatactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtg----tcagacacgac 102  Q
    ||||| ||||||||  || |||||||||||||| |||||||| |||| ||||||| |||||  |  ||||||| |  ||| ||||    || ||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtcagttttgtgttggtgggtgtcggacacgac 92889  T
Q  103 acatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    ||||||| |||||| ||||||| ||||||||| |||||| ||||||||||    
T  92890 acatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcat 92939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 70327 - 70394
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 151  Q
    |||||||||| |||||||||| ||||||||||| ||||| | ||||||||| ||||||||||||||||    
T  70327 tgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 2979 - 3052
Alignment:
Q  75 tcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 148  Q
    |||||||| ||||||| ||||||||||||| ||| ||||||||| ||||| ||||||||| |||||| ||||||    
T  2979 tcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgct 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 4879 - 4823
Alignment:
Q  96 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 4823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 472 - 404
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||| | ||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  472 tgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 44582 - 44486
Alignment:
Q  26 caccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggaca 122  Q
    ||||||||| |||| ||||||||||||| ||||||| ||||| ||| |||| || || |||||||||  ||||| |||| |||||||||| ||||||    
T  44582 caccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacactgggaca 44486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 8847 - 8915
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||||||| |||||||||| |||||||||||| |||||| |||||| || |||| | ||||||||||    
T  8847 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcat 8915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 85014 - 84921
Alignment:
Q  42 agaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaa 135  Q
    ||||||||| || |||  || ||||| |||||||| ||||||||||| ||||  |||| |||| ||||||||| | ||||||| ||||||||||    
T  85014 agaaaatcatataattatgtgtaattatatatgtcggtgtcatgtcgatgtcgaacacaacacgtgtccgacaacaggacacgcctaatccgaa 84921  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 14580 - 14644
Alignment:
Q  88 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 152  Q
    |||||| |||||||||| |||||||||||| |||||| ||||||  | |||||| ||||||||||    
T  14580 ggtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcat 14644  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 21051 - 21119
Alignment:
Q  32 taataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacg 100  Q
    |||||||| ||||||||||||| | || |||||||| ||| |||| || || |||||||||||||||||    
T  21051 taataatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgtcggtgtcagacacg 21119  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 68314 - 68210
Alignment:
Q  11 atactgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtcc 110  Q
    ||||||||||||   ||||| |||||||| |||||||||| || ||| ||||||||| ||  |||||||||| | ||||||||  |||| ||| |||| |    
T  68314 atactgacacattagcaccgttaataatttgagaaaatcatataatttagtataattataggtgtcagtgtcgtatcggtgtcgaacacaacatatgttc 68215  T
Q  111 gacac 115  Q
    |||||    
T  68214 gacac 68210  T

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Target: scaffold1528 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 1025 - 1120
Alignment:
Q  14 ctgacacatcgccaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatgtc 109  Q
    |||||||| || |||||||||||||| || ||||| |||| ||||||| ||| | ||| |||||||||  |||||||||  ||||| ||| |||||    
T  1025 ctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacaaatgtc 1120  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 17612 - 17539
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 157  Q
    ||||||||| |||||| | | |||||||||||||||||||| |||||| |  |||| | |||||||||| ||||    
T  17612 tgtcggtgttagacacaatatatgtccgacaccgggacacgcctaatcagctgagtttccgtgcttcatagata 17539  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 1693 - 1733
Alignment:
Q  84 tgtcggtgtcagacacgacacatgtccgacaccgggacacg 124  Q
    |||||||||| |||||||||||||||||||||  |||||||    
T  1693 tgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

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