View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2378_low_5 (Length: 315)
Name: NF2378_low_5
Description: NF2378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2378_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 6 - 297
Target Start/End: Original strand, 45814295 - 45814586
Alignment:
| Q |
6 |
aggagcagagatgattgttggtgatgggtttgtgtcttgaagttttctcccaatcttgtgatctgtaacaagaaactgaatctgagactttgagatcttg |
105 |
Q |
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| T |
45814295 |
aggaacagtgatgattgttggtgctgggtttgtgtcttgaagttttctcccaatcttgtgatttgtaacaagaaactgaatctgagactttgagatcttg |
45814394 |
T |
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| Q |
106 |
cttttttgaaggaatcttgctccagaaaaagttgaaaatgcattggttcctgaaaagaatttgaaagtagcataattagagtgtaaaaacagcattaaac |
205 |
Q |
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| T |
45814395 |
cttttttgaaggaatcttgctccagaaaaagttgaaaatgcattggttcctgaaaagaatttgaaagtagcataattagagtgtaaaaacagcattaaac |
45814494 |
T |
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| Q |
206 |
aaggttaacaagaagaataatgattgattagtgattagattacttaccagaacagaagaaaatgagaaaagataggaacaagaggcaagtag |
297 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45814495 |
aaggttcacaagaagaataatgattgattagtgattagattacttaccagaacagaagaaaatgagaaaagataggaacaagaggcaagtag |
45814586 |
T |
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