View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2379_low_13 (Length: 251)
Name: NF2379_low_13
Description: NF2379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2379_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 38802717 - 38802947
Alignment:
| Q |
8 |
catatacctcttgggtgaaaactaggttgtttctacttaatgaatcgactatgatttattaaatttgaaaaggtaaataaaatcaatcaaagtgttttaa |
107 |
Q |
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| T |
38802717 |
catatacctcttgggtgaaaactaggttgtttctacttaatgaatcgactatgatttattaaatttgaaaaggtaaataaaatcaatcaaagtgttttaa |
38802816 |
T |
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| Q |
108 |
ataactgaaaataaagtagataattaactatcaaccctttttgaatttttagaagaaattaccaacatgagaaaaacaaataggaatcgaatcctttcat |
207 |
Q |
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| T |
38802817 |
ataactgaaaataaagtagataattaactattaaccctttttgaatttttagaagaaattacctacatgagaaaaacaaataggaatcgaatcctttcat |
38802916 |
T |
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| Q |
208 |
tgtccccgttttttgacacacttgttctcct |
238 |
Q |
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| T |
38802917 |
tgtccccgttttttgacgcacttgttctcct |
38802947 |
T |
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