View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2381_low_17 (Length: 230)

Name: NF2381_low_17
Description: NF2381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2381_low_17
NF2381_low_17
[»] chr8 (14 HSPs)
chr8 (77-222)||(25609003-25609148)
chr8 (93-185)||(45560319-45560411)
chr8 (89-185)||(25294938-25295034)
chr8 (89-185)||(25756958-25757054)
chr8 (94-182)||(3845250-3845338)
chr8 (93-185)||(11543487-11543578)
chr8 (93-185)||(22312642-22312733)
chr8 (90-185)||(20177085-20177181)
chr8 (90-185)||(20221812-20221908)
chr8 (108-181)||(19332722-19332795)
chr8 (91-185)||(7469134-7469229)
chr8 (91-185)||(38636880-38636975)
chr8 (105-185)||(22498490-22498569)
chr8 (97-185)||(24238571-24238659)
[»] chr3 (14 HSPs)
chr3 (89-185)||(8603590-8603686)
chr3 (89-185)||(5229215-5229311)
chr3 (89-178)||(11401544-11401633)
chr3 (91-185)||(25105176-25105270)
chr3 (89-185)||(38376913-38377009)
chr3 (89-182)||(11516703-11516796)
chr3 (114-185)||(17759544-17759615)
chr3 (91-185)||(18968976-18969071)
chr3 (114-185)||(19060864-19060935)
chr3 (181-219)||(17319848-17319886)
chr3 (115-181)||(37917583-37917649)
chr3 (115-181)||(40040332-40040398)
chr3 (91-169)||(43428768-43428846)
chr3 (90-182)||(17392312-17392404)
[»] chr2 (10 HSPs)
chr2 (89-185)||(24561972-24562068)
chr2 (89-185)||(18534796-18534892)
chr2 (89-185)||(20272328-20272424)
chr2 (97-185)||(22331695-22331783)
chr2 (113-185)||(43641709-43641781)
chr2 (89-181)||(6093802-6093894)
chr2 (125-185)||(45618405-45618465)
chr2 (113-183)||(19434681-19434751)
chr2 (113-185)||(24840793-24840864)
chr2 (89-181)||(29113176-29113268)
[»] chr4 (10 HSPs)
chr4 (90-185)||(54364673-54364768)
chr4 (89-185)||(19558301-19558397)
chr4 (89-185)||(17376661-17376757)
chr4 (89-185)||(5371800-5371895)
chr4 (89-185)||(12134853-12134949)
chr4 (89-181)||(14570225-14570317)
chr4 (90-185)||(12733032-12733127)
chr4 (91-185)||(38763662-38763757)
chr4 (105-185)||(49070722-49070802)
chr4 (136-185)||(17213072-17213121)
[»] scaffold0090 (3 HSPs)
scaffold0090 (89-185)||(1365-1461)
scaffold0090 (89-185)||(5745-5841)
scaffold0090 (89-182)||(35914-36006)
[»] chr5 (8 HSPs)
chr5 (89-185)||(11964919-11965015)
chr5 (89-185)||(20455198-20455294)
chr5 (89-185)||(21108478-21108574)
chr5 (91-185)||(33627606-33627700)
chr5 (89-185)||(14342868-14342964)
chr5 (94-182)||(20833214-20833301)
chr5 (105-185)||(23414118-23414198)
chr5 (113-177)||(24226695-24226759)
[»] scaffold0231 (1 HSPs)
scaffold0231 (89-178)||(14075-14164)
[»] chr7 (16 HSPs)
chr7 (89-186)||(4483697-4483794)
chr7 (89-185)||(8564727-8564823)
chr7 (89-185)||(21676059-21676155)
chr7 (89-185)||(28719424-28719520)
chr7 (91-185)||(16382519-16382613)
chr7 (118-182)||(15979209-15979273)
chr7 (90-185)||(44306324-44306420)
chr7 (94-182)||(21539343-21539431)
chr7 (105-185)||(13617718-13617798)
chr7 (96-185)||(39292885-39292973)
chr7 (116-185)||(14939684-14939754)
chr7 (116-185)||(15367277-15367347)
chr7 (89-183)||(45148512-45148606)
chr7 (137-185)||(19066507-19066555)
chr7 (105-185)||(31500108-31500188)
chr7 (97-141)||(46472941-46472985)
[»] scaffold0317 (1 HSPs)
scaffold0317 (89-185)||(14952-15048)
[»] chr6 (8 HSPs)
chr6 (89-185)||(17084459-17084555)
chr6 (89-179)||(23220670-23220759)
chr6 (89-170)||(16135252-16135333)
chr6 (89-183)||(11373965-11374059)
chr6 (136-185)||(16375279-16375328)
chr6 (91-185)||(22463326-22463421)
chr6 (136-185)||(31162114-31162163)
chr6 (89-181)||(29161553-29161644)
[»] chr1 (7 HSPs)
chr1 (113-185)||(33396293-33396366)
chr1 (113-181)||(20821981-20822049)
chr1 (90-183)||(40437490-40437583)
chr1 (91-174)||(46144656-46144739)
chr1 (91-185)||(49998533-49998628)
chr1 (89-141)||(77188-77240)
chr1 (91-140)||(52399500-52399549)
[»] scaffold1204 (1 HSPs)
scaffold1204 (89-185)||(1324-1420)
[»] scaffold0601 (1 HSPs)
scaffold0601 (113-185)||(2206-2278)
[»] scaffold0079 (1 HSPs)
scaffold0079 (89-185)||(5225-5321)
[»] scaffold0183 (1 HSPs)
scaffold0183 (96-186)||(9787-9878)
[»] scaffold0174 (1 HSPs)
scaffold0174 (89-182)||(21192-21284)
[»] scaffold0057 (1 HSPs)
scaffold0057 (105-185)||(4840-4920)
[»] scaffold0005 (1 HSPs)
scaffold0005 (89-181)||(247059-247151)
[»] scaffold0468 (1 HSPs)
scaffold0468 (89-180)||(12200-12290)
[»] scaffold0153 (1 HSPs)
scaffold0153 (99-185)||(755-841)
[»] scaffold0017 (1 HSPs)
scaffold0017 (92-185)||(11553-11647)
[»] scaffold0013 (1 HSPs)
scaffold0013 (96-185)||(8331-8420)
[»] scaffold0047 (1 HSPs)
scaffold0047 (115-181)||(75970-76036)
[»] scaffold1278 (1 HSPs)
scaffold1278 (136-186)||(473-523)


Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 25609003 - 25609148
Alignment:
Q  77 gtattcaccaaccaatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaa 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25609003 gtattcaccaaccaatcaacatatatgtattaatccacatcaactatatcatatagttcaacaacatcatactatttctcacaatccaagtaaaggagaa 25609102  T
Q  177 aatacaacatgtattcgttaaatcaacttcaactatatcctatggt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25609103 aatacaacatgtattcgttaaatcaacttcaactatatcctatggt 25609148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 45560411 - 45560319
Alignment:
Q  93 caacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||||||||||||||||    
T  45560411 caacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaacttctcacaatccaagtaaaggagaaaatacaaca 45560319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 25294938 - 25295034
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||| |||||||||||  |||||||||||||||||||||||    
T  25294938 caattaacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaaca 25295034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 25756958 - 25757054
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||| |||||||||||  |||||||||||||||||||||||    
T  25756958 caattaacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaaca 25757054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 3845338 - 3845250
Alignment:
Q  94 aacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaataca 182  Q
    |||||||||| | |||||   |||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||    
T  3845338 aacatatatgcactaatcattatcaactatatcatatagttcaacaactccatacaatttctcacaatccaagtaaaggagaaaataca 3845250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 11543487 - 11543578
Alignment:
Q  93 caacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||| ||||||| |||||||||||||||||||||| ||||||  |||||||||||||||||| |||||  ||||||| ||||||||    
T  11543487 caacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatactatttctcacaattcaagt-gaggagaagatacaaca 11543578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 22312642 - 22312733
Alignment:
Q  93 caacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||| ||||||| |||||||||||||||||||||| ||||||  |||||||||||||||||| |||||  ||||||| ||||||||    
T  22312642 caacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatactatttctcacaattcaagt-gaggagaagatacaaca 22312733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 20177181 - 20177085
Alignment:
Q  90 aatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaa-tccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||||||||| | | ||||| |||  |||||||| || |||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  20177181 aatcaacatatatgtattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaaca 20177085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 20221908 - 20221812
Alignment:
Q  90 aatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaa-tccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||||||||| | | ||||| |||  |||||||| || |||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  20221908 aatcaacatatatgtattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaaca 20221812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 19332795 - 19332722
Alignment:
Q  108 aatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    |||| |||||||||||||||||||||| ||||||  ||||   || |||||||||||||||||| |||||||||    
T  19332795 aatcaacatcaactatatcatatagttcaacaactccatatacttcctcacaatccaagtaaagaagaaaatac 19332722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 7469134 - 7469229
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaagga-gaaaatacaaca 185  Q
    |||||||| |||  |||||||  | ||||||||||||||||||| ||||||  ||||| | |||||| ||| ||||||||||| ||||||||||||    
T  7469134 atcaacatgtattcattaatcagcttcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggaggaaaatacaaca 7469229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 38636975 - 38636880
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaagga-gaaaatacaaca 185  Q
    |||||||| |||  ||||||||||  |||||||||||||||||| |||||| |||||  | |||||| |||  |||||||||| ||||||||||||    
T  38636975 atcaacatgtattcattaatccactccaactatatcatatagttcaacaacttcatataacttctcataatataagtaaaggaggaaaatacaaca 38636880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 22498569 - 22498490
Alignment:
Q  105 attaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||| ||||||||||||| |||||||| ||| ||  ||||| | |||||| | |||||||| ||||||||||||||||    
T  22498569 attaatcaacatcaactatataatatagttcaaccactccatac-acttctcatattccaagtataggagaaaatacaaca 22498490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 24238571 - 24238659
Alignment:
Q  97 atatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||| || ||||| ||||||||||||| |||||  | |||||| |||||   ||||||| ||||||||||||| || ||||||||||    
T  24238571 atatatataataatcaacatcaactatataatataactcaacaacttcatatactttctcataatccaagtaaagaagtaaatacaaca 24238659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 8603590 - 8603686
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||| ||||| |||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8603590 caattaacacatatgcattattcaacatcaactatatcatatagttcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 8603686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 5229311 - 5229215
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||  ||||| |||||||||||| |||||||||||||||||||||||    
T  5229311 caatcaacatatatgcattaatcgacatcaactatatcatattgttcaacaactccatacgatttctcacaattcaagtaaaggagaaaatacaaca 5229215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 11401544 - 11401633
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaa 178  Q
    |||| |||||||||| ||||||| ||||||||| |||||||||||| |||||| |||||| |||||||||||| ||||||||||||||||    
T  11401544 caattaacatatatgcattaatcaacatcaactttatcatatagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaa 11401633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 25105270 - 25105176
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||| |||  ||||||| || ||||||||||||| ||||| ||||||  ||||| ||||| |||||| |||||||||||||||||||||||    
T  25105270 atcaacatgtattcattaatcaacttcaactatatcatttagttcaacaactccatacaatttcccacaattcaagtaaaggagaaaatacaaca 25105176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 38377009 - 38376913
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||||  |||| | | ||||| ||| ||||||||  || |||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  38377009 caatcaacatatacatattcaccaacatcgactttatcatatgattcaacaacatcatattatttctcaaaatccaagtaaaggagaaaatataaca 38376913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 11516796 - 11516703
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaataca 182  Q
    ||||||||||||||||||| | | | ||||||| | ||| |||||| ||||  | ||||| | |||||||||||||||||||| ||||||||||    
T  11516796 caatcaacatatatgtattcaccaatatcaactttttcacatagttcaacactaacatacaacttctcacaatccaagtaaagaagaaaataca 11516703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 17759615 - 17759544
Alignment:
Q  114 catcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||||||||| || ||||||  ||||   ||||||||||||||| |||| ||||||||||||||    
T  17759615 catcaactatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaaca 17759544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 18968976 - 18969071
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaagga-gaaaatacaaca 185  Q
    |||||||| |||  |||||||||| ||||||||||||||||||| |||| |  ||| | | |||||| ||| ||||||||||| ||||||||||||    
T  18968976 atcaacatgtattcattaatccacttcaactatatcatatagttcaacagctccattcaacttctcataatacaagtaaaggaggaaaatacaaca 18969071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 19060935 - 19060864
Alignment:
Q  114 catcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||||||||| || ||||||  ||||   ||||||||||||||| |||| ||||||||||||||    
T  19060935 catcaactatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaaca 19060864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 17319886 - 17319848
Alignment:
Q  181 caacatgtattcgttaaatcaacttcaactatatcctat 219  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  17319886 caacatgtattcattaaatcaacttcaactatatcctat 17319848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 37917649 - 37917583
Alignment:
Q  115 atcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    |||||||  |||||||| || ||||||||||||  ||||||||| |||||| |||||||||||||||    
T  37917649 atcaacttcatcatataattcaacaacatcatatgatttctcaccatccaaataaaggagaaaatac 37917583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 40040398 - 40040332
Alignment:
Q  115 atcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    |||||||  |||||||| || ||||||||||||  |||| |||| |||||| |||||||||||||||    
T  40040398 atcaacttcatcatataattcaacaacatcatatgatttatcaccatccaaataaaggagaaaatac 40040332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 43428846 - 43428768
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaa 169  Q
    |||||||| |||  ||||||| || || |||||||||||||||| ||||||  ||||| |||||||| ||| |||||||    
T  43428846 atcaacatgtattcattaatcaacttccactatatcatatagttcaacaactccatacaatttctcataatacaagtaa 43428768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 17392312 - 17392404
Alignment:
Q  90 aatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaataca 182  Q
    |||||||||||||||||| |   |||||||||   ||| ||| || || |||| ||||  |||||||||| | ||||||||||||||||||||    
T  17392312 aatcaacatatatgtattcactaacatcaacttcttcacataattcaataacaacataagatttctcacatttcaagtaaaggagaaaataca 17392404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 24562068 - 24561972
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| ||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24562068 caatcaacatatatgcattaatcaacatcgactttatcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 24561972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 18534796 - 18534892
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||  |||||||||||| |||||||||||||||||||||||    
T  18534796 caatcaacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaaca 18534892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 20272328 - 20272424
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||||||| | | ||||| ||| ||||||||| || || |||||||||| ||||||||||||||||||||||||||||||||||||    
T  20272328 caattaacatatatgtattcaccaacatcgactttatcatataattcaataacatcatacaatttctcacaatccaagtaaaggagaaaatacaaca 20272424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 22331695 - 22331783
Alignment:
Q  97 atatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||| ||||||| |||| ||||||||||||||||| ||||||  ||||| |||||||||||| |||||||||||||| ||||||||    
T  22331695 atatatgcattaatcaacataaactatatcatatagttcaacaactccatacaatttctcacaatacaagtaaaggagaagatacaaca 22331783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 43641709 - 43641781
Alignment:
Q  113 acatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||||| ||||||||||| ||||||  ||||| |||||||||||| |||||||||||||||||||||||    
T  43641709 acatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaaca 43641781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 6093802 - 6093894
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    |||| |||||||||| | || || |||  ||||||||||||||||| ||||||  ||||   |||||||||||||||||||||||||||||||    
T  6093802 caattaacatatatgcaatattcaacaataactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatac 6093894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 45618405 - 45618465
Alignment:
Q  125 tcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||||| |||||| |||||| |||||||||||| |||||||| ||||||||||||||    
T  45618405 tcatatagttcaacaacttcatacaatttctcacaattcaagtaaaagagaaaatacaaca 45618465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 19434751 - 19434681
Alignment:
Q  113 acatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaa 183  Q
    |||||||||| ||||||||||| || |||  | ||| |||||||||||| |||||||||||||||||||||    
T  19434751 acatcaactacatcatatagttcaaaaactccttacaatttctcacaattcaagtaaaggagaaaatacaa 19434681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 24840793 - 24840864
Alignment:
Q  113 acatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||| ||| ||||||||| || |||||||||||| ||||||||||||| |||||  ||||||||||||||||    
T  24840793 acatcgactttatcatataattcaacaacatcatattatttctcacaattcaagt-gaggagaaaatacaaca 24840864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 29113176 - 29113268
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    |||| |||||||||||||| | | | |||||||  |||||||| || || ||||||| | | ||||||||||||||| |||||||||||||||    
T  29113176 caattaacatatatgtattcaccaatatcaacttcatcatataattcaataacatcacattgtttctcacaatccaaataaaggagaaaatac 29113268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 54364768 - 54364673
Alignment:
Q  90 aatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||||||||| | | ||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54364768 aatcaacatatatgtattcaccaacatcgactttatcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 54364673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 19558301 - 19558397
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||   |||| |||||||||||| |||||||||||||||||||||||    
T  19558301 caatcaacagatatgtattaatcaacatcaactatatcatatggttcaacaactcgatacaatttctcacaattcaagtaaaggagaaaatacaaca 19558397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 17376757 - 17376661
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||| | |||||||||| |||||||| || ||||||  ||||  |||||||||||| |||||||||||||||||||||||    
T  17376757 caatcaacatatatgcattaaccaacatcaactaaatcatataatttaacaaccccatataatttctcacaattcaagtaaaggagaaaatacaaca 17376661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 5371895 - 5371800
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| | ||||||  |||||  ||||||||||| || | ||||||||||||||||||    
T  5371895 caatcaacatatatgcattaatcaacatcaactatatcatatag-tcaacaactccatacagtttctcacaattcaggcaaaggagaaaatacaaca 5371800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 12134949 - 12134853
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||| ||| |||| || |||||||||||||||||||||| ||||||  ||||   |||||||||||||||||||| ||||||||||||||    
T  12134949 caattaacatagatgcattattcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaagagaaaatacaaca 12134853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 14570225 - 14570317
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    ||||||||||||||||||| | | | |||||||  |||||| | || ||||||||||||||||||||||||||| || |||||||||||||||    
T  14570225 caatcaacatatatgtattcaccaatatcaacttcatcataaaattcaacaacatcatactatttctcacaatcaaaataaaggagaaaatac 14570317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 12733032 - 12733127
Alignment:
Q  90 aatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||| |||  || |||| || ||||||||||| ||||||| |||||| ||  || |||||||||||| |||||||||||||||||||||||    
T  12733032 aatcaacatgtattcatcaatcaacttcaactatatcctatagttcaacaacttcgcaccatttctcacaatacaagtaaaggagaaaatacaaca 12733127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 38763662 - 38763757
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaagga-gaaaatacaaca 185  Q
    |||||||| |||  |||||||||| ||||||||||||||||||| |||||| |||||| | || ||| ||| ||||||||||| ||||||||||||    
T  38763662 atcaacatgtattcattaatccacttcaactatatcatatagttcaacaacttcatacaacttttcataatacaagtaaaggaggaaaatacaaca 38763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 49070722 - 49070802
Alignment:
Q  105 attaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||| ||||||||||||| |||||| | ||||||  ||||   ||||||||||||||||||||||||| |||||||||    
T  49070722 attaatcaacatcaactatataatatagctcaacaactccatatactttctcacaatccaagtaaaggagagaatacaaca 49070802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 17213121 - 17213072
Alignment:
Q  136 aacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  17213121 aacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaaca 17213072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 1461 - 1365
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||| ||||||  ||||| |||||||||||| |||||||||||||||||||||||    
T  1461 caatcaacatatatgcattaatcaacgtcaactatatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaaca 1365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 5841 - 5745
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||| ||||||  ||||| |||||||||||| |||||||||||||||||||||||    
T  5841 caatcaacatatatgcattaatcaacgtcaactatatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaaca 5745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 36006 - 35914
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaataca 182  Q
    |||||||||||||| | || | | | |||||||  |||||||| || |||| |||||||| |||||||| | |||||||||| |||||||||||    
T  36006 caatcaacatatatattttcaccaatatcaactgcatcatataattcaacatcatcatacgatttctcatattccaagtaaa-gagaaaataca 35914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 11964919 - 11965015
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| ||||||||||||| || ||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  11964919 caatcaacatatatgcattaatcaacatcaactatattatttagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaaca 11965015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 20455294 - 20455198
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||| |  ||||||||||| |||||||||||||||||||||||    
T  20455294 caatcaacatatatgcattaatcaacatcaactatatcatatagttcaacaactccattcagtttctcacaattcaagtaaaggagaaaatacaaca 20455198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 21108478 - 21108574
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||||| || || |||||||||||||||||||||| ||||||  ||||   |||||||||||||||||||||||||||||||||||    
T  21108478 caatcaacatatatgtaatattcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaaca 21108574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 33627700 - 33627606
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||| ||| |||||||| || ||||||||||||||||||| ||||||  ||||| |||| ||| ||| |||||||||||||||||||||||    
T  33627700 atcaacatgtatttattaatcaacttcaactatatcatatagttcaacaactccatacaatttttcataatacaagtaaaggagaaaatacaaca 33627606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 14342964 - 14342868
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||| |||| || |||||||||||||||||| ||| ||||||  ||||| |||||||||||| ||| ||| |||||||||||||||    
T  14342964 caattaacatatatgcattattcaacatcaactatatcatattgttcaacaactccataccatttctcacaattcaattaatggagaaaatacaaca 14342868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 20833301 - 20833214
Alignment:
Q  94 aacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaataca 182  Q
    |||||||||| |||| || |||||||||||||||||||||| ||||||  |||| ||||||||||||| |||||||| |||||||||||    
T  20833301 aacatatatgcattattcaacatcaactatatcatatagttcaacaactccatattatttctcacaatacaagtaaa-gagaaaataca 20833214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 23414118 - 23414198
Alignment:
Q  105 attaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||| ||||||||||||| |||||| | ||||||  |||||  ||||||||| |||||||||||||||||||||||||    
T  23414118 attaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaaggagaaaatacaaca 23414198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 24226759 - 24226695
Alignment:
Q  113 acatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaa 177  Q
    |||||||||| ||||||||||| ||||||  ||||| |||||||||||| |||||||||||||||    
T  24226759 acatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaa 24226695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 14164 - 14075
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaa 178  Q
    ||||||||||||||||||| | | ||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||||||||    
T  14164 caatcaacatatatgtattcaccaacatcaactatatcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaa 14075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 6e-27; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 4483697 - 4483794
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacat 186  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||| |||||||||||| ||| |||||| |||||||||||||    
T  4483697 caatcaacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaattcaaataaaggggaaaatacaacat 4483794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 8564823 - 8564727
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||| |||||||||||| |||||||||||||| ||||||||    
T  8564823 caattaacatatatgcattaatcaacatcaactatatcatatagttcaacaactccatacgatttctcacaattcaagtaaaggagaacatacaaca 8564727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 21676155 - 21676059
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||| |||| || |||||||||||||||||||||| ||||||  ||||| |||||||||||| |||||||||||||||||||||||    
T  21676155 caattaacatatatgcattattcaacatcaactatatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaaca 21676059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 28719424 - 28719520
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||  ||||| |||||||| ||| |||||||| ||||||||||||||    
T  28719424 caatcaacatatatgcattaatcaacatcaactctatcatatagttcaacaactccatacaatttctcaaaattcaagtaaaagagaaaatacaaca 28719520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 16382519 - 16382613
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| || || |||||||||||||||||||||| ||||||  ||||   ||||||| |||||||||||||||||||||||||||    
T  16382519 atcaacatatatgtaatattcaacatcaactatatcatatagttcaacaactccatatactttctcataatccaagtaaaggagaaaatacaaca 16382613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 15979273 - 15979209
Alignment:
Q  118 aactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaataca 182  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||    
T  15979273 aactatatcatatagttcaacaacttcatacaatttctcacaatccaagtaaagtagaaaataca 15979209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 44306420 - 44306324
Alignment:
Q  90 aatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaa-tccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||||||||| | | ||||| |||  |||||||| || |||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  44306420 aatcaacatatatgtattcaccaacatcgacttcatcatataattcaacaacatcatattatttctcacaatttcaagtaaaggagaaaatacaaca 44306324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 21539431 - 21539343
Alignment:
Q  94 aacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcac-aatccaagtaaaggagaaaataca 182  Q
    ||||| |||| ||||||| |||||||||||||||||||||| ||||||  ||||| ||||||||| ||||||||| ||||||||||||||    
T  21539431 aacatgtatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaaatccaagt-aaggagaaaataca 21539343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 13617718 - 13617798
Alignment:
Q  105 attaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||| ||||||||||||| |||||| | ||||||  |||||  ||||||||| |||||||||||||||||||||||||    
T  13617718 attaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaaggagaaaatacaaca 13617798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 39292973 - 39292885
Alignment:
Q  96 catatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| ||| ||||||| |||| ||||| ||||||| ||| ||||||  ||||| |||||||||||| || |||||||||| |||||||||    
T  39292973 catacatgcattaatcaacat-aactagatcatatggttcaacaactccatacaatttctcacaatacacgtaaaggagagaatacaaca 39292885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 14939684 - 14939754
Alignment:
Q  116 tcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaagga-gaaaatacaaca 185  Q
    ||||||||||||| ||||| |||||| |||||  | |||||| ||| ||||||||||| ||||||||||||    
T  14939684 tcaactatatcatttagttcaacaacttcatataacttctcataatacaagtaaaggaggaaaatacaaca 14939754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 15367277 - 15367347
Alignment:
Q  116 tcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaagga-gaaaatacaaca 185  Q
    ||||||||||||| ||||| |||||| |||||  | |||||| ||| ||||||||||| ||||||||||||    
T  15367277 tcaactatatcatttagttcaacaacttcatataacttctcataatacaagtaaaggaggaaaatacaaca 15367347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 45148512 - 45148606
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaa 183  Q
    |||| |||||||||| | || || ||||||| |||||| ||||||| ||||||  ||||   | |||||||| ||||||||| ||||||||||||    
T  45148512 caattaacatatatgcaatattcaacatcaattatatcttatagttcaacaactccatatactatctcacaaaccaagtaaatgagaaaatacaa 45148606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 19066507 - 19066555
Alignment:
Q  137 acaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||||| | |||||||||||| |||||||| || |||||||||||    
T  19066507 acaacatcatgcaatttctcacaattcaagtaaaagaaaaaatacaaca 19066555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 31500108 - 31500188
Alignment:
Q  105 attaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||| || ||||||||||  ||||||| | |||| |  ||| |||| |||| ||||||||||| ||||||||||||||    
T  31500108 attaatcaacttcaactatattctatagttcatcaactttgtacaatttatcaccatccaagtaaaagagaaaatacaaca 31500188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 46472941 - 46472985
Alignment:
Q  97 atatatgtattaatccacatcaactatatcatatagttaaacaac 141  Q
    ||||||| ||||||| |||| ||||||||||||||||| ||||||    
T  46472941 atatatgcattaatcaacataaactatatcatatagttcaacaac 46472985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 15048 - 14952
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||  |||||||||||| |||||||||||||||||||||||    
T  15048 caattaacatatatgcattaatcgacatcaactatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaaca 14952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 17084555 - 17084459
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||| ||||||  ||||| |||||||||||| |||||||| ||||||||||||||    
T  17084555 caatcaacatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaatttctcacaatacaagtaaatgagaaaatacaaca 17084459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23220670 - 23220759
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaat 179  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| |||||| |||||  |||||||||||| |||||||||||||||||    
T  23220670 caatcaacatatatgcattaatcaacatcaactatatcatatagttcaacaac-tcatataatttctcacaattcaagtaaaggagaaaat 23220759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 16135252 - 16135333
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaa 170  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| || |||  ||||| |||||||||||||||||||||    
T  16135252 caatcaacatatatgcattaatcaacatcaactatatcatatagttcaataactccatacaatttctcacaatccaagtaaa 16135333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 11374059 - 11373965
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaa 183  Q
    |||| |||||||||| | || || |||||||||||||||||||||| ||||||   |||   | |||||||||||||||||||||||||||||||    
T  11374059 caattaacatatatgcaatattcaacatcaactatatcatatagttcaacaactctatatactatctcacaatccaagtaaaggagaaaatacaa 11373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 16375279 - 16375328
Alignment:
Q  136 aacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  16375279 aacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaaca 16375328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 22463421 - 22463326
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaagga-gaaaatacaaca 185  Q
    |||||||| |||  ||||||| || ||||||||||| ||||||| || | | ||  || |||||||||||||||||||||||| ||||||||||||    
T  22463421 atcaacatgtattcattaatcaacttcaactatatcctatagttcaaaaccttcgcacaatttctcacaatccaagtaaaggaggaaaatacaaca 22463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 31162163 - 31162114
Alignment:
Q  136 aacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||| ||||||  ||||||||||| |||||||||||||||||||||||    
T  31162163 aacaacttcatacagtttctcacaattcaagtaaaggagaaaatacaaca 31162114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 29161644 - 29161553
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    |||| |||||||||| | || || ||||||||||||||||||||||  |||||  ||||   ||| |||| ||||||||||||||||||||||    
T  29161644 caattaacatatatgcaatattcaacatcaactatatcatatagttcgacaactccatatactttttcac-atccaagtaaaggagaaaatac 29161553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 33396293 - 33396366
Alignment:
Q  113 acatcaactatatcatatagttaaacaacatcatactatttctcacaa-tccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  33396293 acatcaactatatcatatagttcaacaacatcatattatttctcacaattccaagtaaatgagaaaatacaaca 33396366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 20821981 - 20822049
Alignment:
Q  113 acatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    ||||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||||    
T  20821981 acatcaactttatcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaatac 20822049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 183
Target Start/End: Complemental strand, 40437583 - 40437490
Alignment:
Q  90 aatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaa 183  Q
    ||||||||| |||  ||||||| || |||| |||||| ||||||| |||||| ||  || ||||||||||||||||||||||||| ||||||||    
T  40437583 aatcaacatgtattcattaatcaacttcaattatatcctatagttcaacaacttcgcacaatttctcacaatccaagtaaaggaggaaatacaa 40437490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 46144656 - 46144739
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggag 174  Q
    |||||||| |||  |||||||||| ||||||||||||||||||| ||||||  ||||| | |||||| ||| ||||||||||||    
T  46144656 atcaacatgtattcattaatccacttcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggag 46144739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 49998628 - 49998533
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaagga-gaaaatacaaca 185  Q
    |||||||| |||  ||||||||||  |||||||||||||||||| ||||||  ||||| | |||||| ||| ||||||||||| ||||||||||||    
T  49998628 atcaacatgtattcattaatccactccaactatatcatatagttcaacaactacatacaacttctcataatacaagtaaaggaggaaaatacaaca 49998533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 77240 - 77188
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaac 141  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||| ||||||    
T  77240 caatcaacatatatgcattaatcaccatcaactatatcatatagtttaacaac 77188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 52399500 - 52399549
Alignment:
Q  91 atcaacatatatgtattaatccacatcaactatatcatatagttaaacaa 140  Q
    |||||||| |||  |||||||||| ||||||||||||||||||| |||||    
T  52399500 atcaacatgtattcattaatccacttcaactatatcatatagttcaacaa 52399549  T

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Target: scaffold1204 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 1420 - 1324
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||| | || || |||||||||||||||||||||| ||||||  ||||   |||||||||||||||||||||||||||||||||||    
T  1420 caattaacatatatgcaatattcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaaca 1324  T

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Target: scaffold0601 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 2278 - 2206
Alignment:
Q  113 acatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||| ||| ||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2278 acatcgactttatcatataattcaacaacatcatattatttctcacaatccaagtaaaggagaaaatacaaca 2206  T

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Target: scaffold0079 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 5321 - 5225
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||| |||||||||  |||| || |||||||||||||||||||||| |||||| |||||| |||||||||||| ||| ||| |||||||||||||||    
T  5321 caattaacatatatacattattcaacatcaactatatcatatagttcaacaacttcataccatttctcacaattcaattaatggagaaaatacaaca 5225  T

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Target: scaffold0183 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 9787 - 9878
Alignment:
Q  96 catatatgtattaatccacatcaactatatcatatagttaaacaacatcatacta-tttctcacaatccaagtaaaggagaaaatacaacat 186  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||  ||||| | ||||||||||| |||||||| |||||||||||||||    
T  9787 catatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaattttctcacaattcaagtaaaagagaaaatacaacat 9878  T

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Target: scaffold0174 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 21284 - 21192
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaataca 182  Q
    ||||||||||||||||||| ||| ||||| ||| ||||||||| ||  ||||||||||||||||||||||||| |||||  |||||||||||||    
T  21284 caatcaacatatatgtattcatcaacatcgactttatcatataattccacaacatcatactatttctcacaattcaagt-gaggagaaaataca 21192  T

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Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 4840 - 4920
Alignment:
Q  105 attaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||||| | ||||||||||| |||||| | |||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  4840 attaatcaatatcaactatataatatagctcaacaacttcatacactttctcacaatccaagtaaaggagaaaatacaaca 4920  T

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Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 247151 - 247059
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    ||||||||||||||||||| | | | |||||||  |||||| | || ||||||||||||||||||||||||||| || |||||||||||||||    
T  247151 caatcaacatatatgtattcaccaatatcaacttcatcataaaattcaacaacatcatactatttctcacaatcaaaataaaggagaaaatac 247059  T

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Target: scaffold0468 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 12290 - 12200
Alignment:
Q  89 caatcaacatatatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaata 180  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||| |||||   ||||| |||||||||||| ||||| ||||||||||||    
T  12290 caatcgacatatatgcattaatcaacatcaactatatcatatagttcaacaattccatacaatttctcacaattcaagt-aaggagaaaata 12200  T

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Target: scaffold0153 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 755 - 841
Alignment:
Q  99 atatgtattaatccacatcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    ||||| ||||||| |||| ||||||||| ||| ||| |||||||||||    |||||||||||||||||||||||||||||||||||    
T  755 atatgcattaatcaacataaactatatcctatcgttcaacaacatcatgtactttctcacaatccaagtaaaggagaaaatacaaca 841  T

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Target: scaffold0017 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 11553 - 11647
Alignment:
Q  92 tcaacatatatgtattaatccacat-caactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||||||| ||||||| |||| ||||||||| |||||  | |||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  11553 tcaacatatatgcattaatcaacattcaactatataatataactcaacaacttcatacactttctcacaatccaagtaaaggagaaaataaaaca 11647  T

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Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 8420 - 8331
Alignment:
Q  96 catatatgtattaatccacat-caactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 185  Q
    |||||||  ||||||| |||| ||||||||| |||||| ||| |||| ||||||  |||||||||||||||||||||||||||||||||||    
T  8420 catatatacattaatcaacattcaactatataatatagctaa-caacttcatacactttctcacaatccaagtaaaggagaaaatacaaca 8331  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 75970 - 76036
Alignment:
Q  115 atcaactatatcatatagttaaacaacatcatactatttctcacaatccaagtaaaggagaaaatac 181  Q
    |||||||  |||||||| || |||||||||||| | ||||||||||||||| ||||||| |||||||    
T  75970 atcaacttcatcatataattcaacaacatcatattgtttctcacaatccaaataaaggataaaatac 76036  T

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Target: scaffold1278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 473 - 523
Alignment:
Q  136 aacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacat 186  Q
    |||||| |||||| || ||||||||| |||||||||||||||| |||||||    
T  473 aacaacttcatacaatgtctcacaattcaagtaaaggagaaaacacaacat 523  T

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