View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2382_high_10 (Length: 232)
Name: NF2382_high_10
Description: NF2382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2382_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 2340986 - 2340763
Alignment:
| Q |
1 |
aaattgcgataagagttacgctgcaaaccttaatattgtgcaaaa-tacagaagaatgtgactaatgtggagacaattgcagttacaaacttacaatggc |
99 |
Q |
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|||||||||| ||||||| ||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2340986 |
aaattgcgattagagttatgctgcaaaccttattattgcggaaaaatacagaagaatgtgactaatgtggagacaattgcagttacaaacttacaatggc |
2340887 |
T |
|
| Q |
100 |
attgtagagacctctaaaatatttatatattgatcacaattatagttgcagatatttgaagttatgttgnnnnnnnaagggtcaaaatgagaagcaagaa |
199 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
2340886 |
attatagagacctctaaaatatttatatattgatcacaattatagttgcagatatttgaagttatgttgtttttttaagggtcaaaatgagaagcaagaa |
2340787 |
T |
|
| Q |
200 |
aattaggaataatacaataaaact |
223 |
Q |
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||||| |||||||||||||||||| |
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| T |
2340786 |
aattacgaataatacaataaaact |
2340763 |
T |
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