View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2382_high_3 (Length: 384)

Name: NF2382_high_3
Description: NF2382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2382_high_3
NF2382_high_3
[»] chr7 (27 HSPs)
chr7 (48-357)||(27729525-27729835)
chr7 (284-364)||(39550022-39550098)
chr7 (284-367)||(34748761-34748841)
chr7 (284-361)||(36270517-36270590)
chr7 (302-364)||(43384324-43384382)
chr7 (288-364)||(27585243-27585316)
chr7 (284-364)||(36495872-36495949)
chr7 (284-364)||(37755982-37756059)
chr7 (284-364)||(37756208-37756285)
chr7 (284-364)||(37761956-37762033)
chr7 (284-364)||(22206322-22206398)
chr7 (284-364)||(22228341-22228417)
chr7 (288-364)||(36092643-36092714)
chr7 (286-360)||(33909122-33909193)
chr7 (302-364)||(257311-257369)
chr7 (302-364)||(37530967-37531025)
chr7 (284-358)||(44314354-44314425)
chr7 (284-361)||(20296247-20296320)
chr7 (284-364)||(36495649-36495726)
chr7 (284-364)||(47346138-47346215)
chr7 (284-364)||(47346367-47346444)
chr7 (323-364)||(14991553-14991594)
chr7 (323-364)||(15421164-15421205)
chr7 (284-358)||(19843691-19843761)
chr7 (284-328)||(24240466-24240511)
chr7 (323-364)||(28910051-28910092)
chr7 (289-362)||(36092438-36092506)
[»] chr8 (14 HSPs)
chr8 (288-364)||(15711484-15711556)
chr8 (287-361)||(38287784-38287854)
chr8 (284-364)||(9596037-9596113)
chr8 (284-364)||(17607258-17607334)
chr8 (284-364)||(35908662-35908738)
chr8 (288-364)||(14019795-14019868)
chr8 (284-364)||(18464053-18464130)
chr8 (299-361)||(8276548-8276606)
chr8 (284-358)||(20232447-20232518)
chr8 (302-364)||(32931403-32931461)
chr8 (288-360)||(39587906-39587973)
chr8 (287-358)||(9596269-9596336)
chr8 (302-364)||(20298560-20298618)
chr8 (324-364)||(35561686-35561726)
[»] chr1 (25 HSPs)
chr1 (284-364)||(45443204-45443280)
chr1 (284-364)||(17294961-17295038)
chr1 (288-362)||(18585026-18585096)
chr1 (287-364)||(12287835-12287908)
chr1 (284-364)||(45858639-45858715)
chr1 (302-364)||(19937087-19937145)
chr1 (302-364)||(28509431-28509489)
chr1 (279-364)||(27958091-27958172)
chr1 (284-364)||(29228658-29228735)
chr1 (284-327)||(29383700-29383743)
chr1 (302-361)||(40642823-40642878)
chr1 (302-364)||(2697375-2697433)
chr1 (302-364)||(4022169-4022227)
chr1 (284-328)||(17294850-17294895)
chr1 (288-364)||(51722240-51722314)
chr1 (284-364)||(29228431-29228508)
chr1 (284-364)||(33562171-33562248)
chr1 (289-327)||(20208159-20208196)
chr1 (289-327)||(20208458-20208495)
chr1 (284-359)||(40521542-40521613)
chr1 (284-328)||(4187358-4187403)
chr1 (284-328)||(4187589-4187634)
chr1 (287-364)||(31411604-31411678)
chr1 (302-364)||(38474285-38474343)
chr1 (284-328)||(45858863-45858907)
[»] chr5 (17 HSPs)
chr5 (284-361)||(22196600-22196673)
chr5 (284-364)||(22196370-22196446)
chr5 (284-362)||(30329819-30329894)
chr5 (287-364)||(84078-84152)
chr5 (284-364)||(83854-83931)
chr5 (284-364)||(32395358-32395435)
chr5 (288-363)||(39668462-39668532)
chr5 (284-328)||(33040268-33040313)
chr5 (302-367)||(873737-873798)
chr5 (284-357)||(14769883-14769952)
chr5 (284-328)||(18541934-18541978)
chr5 (284-361)||(19439844-19439917)
chr5 (302-367)||(37995675-37995736)
chr5 (302-367)||(38131766-38131827)
chr5 (288-364)||(2471737-2471809)
chr5 (284-328)||(33040453-33040498)
chr5 (284-364)||(29396387-29396464)
[»] chr3 (23 HSPs)
chr3 (284-364)||(36020797-36020876)
chr3 (279-360)||(9179112-9179189)
chr3 (284-364)||(53966216-53966293)
chr3 (284-367)||(48511451-48511531)
chr3 (284-361)||(9180352-9180425)
chr3 (288-364)||(10450692-10450765)
chr3 (288-328)||(48837084-48837124)
chr3 (284-364)||(10856670-10856746)
chr3 (284-364)||(24453762-24453838)
chr3 (286-361)||(9178893-9178964)
chr3 (290-364)||(11244585-11244656)
chr3 (288-361)||(15820652-15820722)
chr3 (302-364)||(48511683-48511741)
chr3 (288-354)||(51734611-51734672)
chr3 (302-364)||(54369041-54369099)
chr3 (288-364)||(10450468-10450541)
chr3 (284-361)||(40769959-40770032)
chr3 (288-364)||(10453747-10453818)
chr3 (284-323)||(16045451-16045490)
chr3 (284-323)||(16060966-16061005)
chr3 (291-328)||(2800037-2800073)
chr3 (302-364)||(43101415-43101473)
chr3 (287-327)||(42576278-42576318)
[»] chr2 (19 HSPs)
chr2 (288-361)||(4506087-4506156)
chr2 (284-364)||(10862102-10862178)
chr2 (287-364)||(33532780-33532853)
chr2 (284-364)||(4342302-4342378)
chr2 (288-364)||(11349837-11349910)
chr2 (284-364)||(28193619-28193695)
chr2 (286-364)||(28193379-28193453)
chr2 (302-364)||(3976515-3976573)
chr2 (288-364)||(11350231-11350304)
chr2 (288-364)||(14280267-14280340)
chr2 (284-364)||(15962201-15962278)
chr2 (284-364)||(39420680-39420757)
chr2 (284-364)||(10861878-10861954)
chr2 (284-327)||(10862290-10862333)
chr2 (284-328)||(15961876-15961921)
chr2 (302-364)||(23054328-23054386)
chr2 (288-361)||(32810923-32810993)
chr2 (284-328)||(32196894-32196938)
chr2 (302-364)||(36161391-36161449)
[»] chr4 (13 HSPs)
chr4 (284-364)||(33912027-33912103)
chr4 (285-367)||(4026058-4026136)
chr4 (284-367)||(11290152-11290232)
chr4 (288-364)||(46528967-46529039)
chr4 (284-325)||(52810931-52810972)
chr4 (284-328)||(26941845-26941889)
chr4 (284-361)||(37097778-37097851)
chr4 (288-361)||(37288916-37288985)
chr4 (302-367)||(50868054-50868115)
chr4 (302-364)||(51469483-51469541)
chr4 (287-364)||(2016519-2016592)
chr4 (324-367)||(23018490-23018533)
chr4 (284-361)||(52810672-52810745)
[»] chr6 (3 HSPs)
chr6 (284-364)||(33396290-33396367)
chr6 (288-364)||(26842707-26842780)
chr6 (284-364)||(33396509-33396585)
[»] scaffold0012 (1 HSPs)
scaffold0012 (284-364)||(165768-165844)
[»] scaffold0785 (1 HSPs)
scaffold0785 (284-317)||(2983-3016)


Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 48 - 357
Target Start/End: Complemental strand, 27729835 - 27729525
Alignment:
Q  48 gaattaagagtatttttgtctttcctttttcttcctattttgttggagtctttggcagggagacaatgccctgattcttgtttgatgccatcaagcacct 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  27729835 gaattaagagtatttttgtctttcctttttcttcctattttgttggagtctttggcaggaagacaatgccctgattcttgtttgatgccatgaagcacct 27729736  T
Q  148 cgttgcagctataatatctccatgcaaagtagccaccacattatccctagcatgatttttcacttttagatgaaccgtcaaagagacaattcttcatata 247  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27729735 cgttgcagctataatatctccatgcaaagtagccaccacattaaccctagcatgatttttcacttttagatgaaccgtcaaagagacaattcttcgtata 27729636  T
Q  248 -nnnnnnnnnncatccgctcctcaaactgttagcgtcagcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaaga 346  Q
               |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| | |||||||    
T  27729635 ttttttgttttcatccgctcctcaaactgttagcgccagcggccaacactcggtgggatttagtcccacatcggatagatagataggattattgggaaga 27729536  T
Q  347 gtttataaaga 357  Q
    |||||||||||    
T  27729535 gtttataaaga 27729525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 39550098 - 39550022
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  39550098 agcggccaacactcggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 39550022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 34748761 - 34748841
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    |||||| | ||||||||||||||||||||||||||    
T  34748761 agcggccaacactcgggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggcattc 34748841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 36270590 - 36270517
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||    |||||| | || |||||||||||||||||    
T  36270590 agcggtcaacactcggtgggatttagtcccacatcggatagatag----gattcttgagacgagtttataaagaggag 36270517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 43384382 - 43384324
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  43384382 ggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 43384324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 27585243 - 27585316
Alignment:
Q  288 gccaacactc-ggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||| |||||||||||||||||||||||||||    |||||| | |||||||||||||| ||||||||    
T  27585243 gccaacactcaggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaaaaggaggca 27585316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 36495872 - 36495949
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    |||||| | ||| |||||||||||||||||||    
T  36495872 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gattcttgagaatagtttataaagaggaggca 36495949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 37756059 - 37755982
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  37756059 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggca 37755982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 37756285 - 37756208
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  37756285 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggca 37756208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 37762033 - 37761956
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  37762033 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggca 37761956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 22206398 - 22206322
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||| | |||||||| |||||||||||||||||| ||||||||    |||||| | ||| |||||||||||||||||||    
T  22206398 agcggcaatcactcggtgggatttagtcccacatcgaatagatag----gattcttgagaaaagtttataaagaggaggca 22206322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 22228341 - 22228417
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||| | |||||||| |||||||||||||||||| ||||||||    |||||| | ||| |||||||||||||||||||    
T  22228341 agcggcaatcactcggtgggatttagtcccacatcgaatagatag----gattcttgagaaaagtttataaagaggaggca 22228417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 36092714 - 36092643
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||| | |||||||||||||||||||||||||    |||||| | |||||||||||| ||||||||||    
T  36092714 gccaacactcggt-gtatttagtcccacatcggatagatag----gattcttgagaagagtttatagagaggaggca 36092643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 33909122 - 33909193
Alignment:
Q  286 cggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagagga 360  Q
    |||||||| ||||| | |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||    
T  33909122 cggccaactctcgggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagagga 33909193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 257369 - 257311
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||||||||||||    | ||||| | |||||||||||||||||||||||    
T  257369 ggatttagtcccacatcggatagata----ttattcttgagaagagtttataaagaggaggca 257311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 37531025 - 37530967
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||| ||||||||||||    |||||| | |||||||||||||||||||||||    
T  37531025 ggatttagtcccacgtcggatagatag----gattcttgagaagagtttataaagaggaggca 37530967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 44314425 - 44314354
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagag 358  Q
    |||||||||||||||| | ||||||||||||||||||||||||| ||   |||||| | |||||||||||||||||    
T  44314425 agcggccaacactcgggtgggatttagtcccacatcggatagat-ga---gattcttgagaagagtttataaagag 44314354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 20296247 - 20296320
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||||||||||||||   |||||||||||||||| ||||||| ||    |||||| | ||||||||||||||||||||    
T  20296247 agcggccaacactcgaggggatttagtcccacattggatagagag----gattcttgagaagagtttataaagaggag 20296320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 36495649 - 36495726
Alignment:
Q  284 agcggccaacactcggtagg-atttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| |||||  || |||||||||||||||||||||||||    |||||| | ||| |||||||||||||||||||    
T  36495649 agcggccaactctcgggtggcatttagtcccacatcggatagatag----gattcttgagaatagtttataaagaggaggca 36495726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 47346215 - 47346138
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | ||||||||||||||||| |||||||||    || ||| | |||||||||||||||||||||||    
T  47346215 agcggccaactctcgggtgggatttagtcccacatcagatagatag----gaatcttgagaagagtttataaagaggaggca 47346138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 47346444 - 47346367
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||| ||||||    || ||| | |||||||||||||||||||||||    
T  47346444 agcggccaactctcgggtgggatttagtcccacatcggaaagatag----gaatcttgagaagagtttataaagaggaggca 47346367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 14991594 - 14991553
Alignment:
Q  323 agatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||| |||||| | |||||||||||||||||||||||    
T  14991594 agatagataggattcttgagaagagtttataaagaggaggca 14991553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 15421205 - 15421164
Alignment:
Q  323 agatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||| |||||| | |||||||||||||||||||||||    
T  15421205 agatagataggattcttgagaagagtttataaagaggaggca 15421164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 19843691 - 19843761
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagag 358  Q
    |||||||||||||||   ||||||||||||| |||    ||||||||| |||||| | |||||||||||||||||    
T  19843691 agcggccaacactcgaagggatttagtcccaaatc----agatagataggattcttgagaagagtttataaagag 19843761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 24240511 - 24240466
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatag 328  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    
T  24240511 agcggccaactctcgggtgggatttagtcccacatcggatagatag 24240466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 28910051 - 28910092
Alignment:
Q  323 agatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||| || ||| |||||||||||||||||||||||||    
T  28910051 agatagataggactcttgggaagagtttataaagaggaggca 28910092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 36092506 - 36092438
Alignment:
Q  289 ccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggagg 362  Q
    ||||||||| || |||||||||||||||| |||||||||    ||||||| | |||||||||||| ||||||||    
T  36092506 ccaacactcagt-ggatttagtcccacattggatagata----tgattcttgagaagagtttatagagaggagg 36092438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 15711484 - 15711556
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||| |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  15711484 gccaacactcggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 15711556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 38287854 - 38287784
Alignment:
Q  287 ggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||||||||||||| |||||||||||||||||||||||||||    |||||| |  |||||||||||||||||||    
T  38287854 ggccaacactcggtgggatttagtcccacatcggatagatag----gattcttgataagagtttataaagaggag 38287784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 9596113 - 9596037
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||    |||||| | ||| | |||||||||||||||||    
T  9596113 agcggccaacactcggtgggatttagttccacatcggatagatag----gattcttgagaatattttataaagaggaggca 9596037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 17607334 - 17607258
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||   |||||||||| ||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  17607334 agcggccaacactcgagtggatttagtctcacatcggatagatag----gattcttgtgaagagtttataaagaggaggca 17607258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 35908662 - 35908738
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    ||| || | ||||||||||||||||| |||||    
T  35908662 agcggccaacactcggtgggatttagtcccacatcgggtagatag----gatacttgagaagagtttataaagagaaggca 35908738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 14019795 - 14019868
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||| | ||||||||||||||||||||||||||| |    |||| | |||||||||||||||||||||||    
T  14019795 gccaacactcgggtgggatttagtcccacatcggatagataggt----ttcttgagaagagtttataaagaggaggca 14019868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 18464053 - 18464130
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||| | ||||||||||||||||| |||||||||    |||||| | ||||||||||||||||| |||||    
T  18464053 agcggccaacactcgggtgggatttagtcccacatcagatagatag----gattcttgagaagagtttataaagagaaggca 18464130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 8276548 - 8276606
Alignment:
Q  299 gtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    ||||||||||||||||||| ||||||||||    |||||| | ||||||||||||||||||||    
T  8276548 gtaggatttagtcccacattggatagatag----gattcttgagaagagtttataaagaggag 8276606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 20232518 - 20232447
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagag 358  Q
    |||||||||||||||| | ||||||||||||||||||||||||| ||   |||||| | |||||||||||||||||    
T  20232518 agcggccaacactcgggtgggatttagtcccacatcggatagat-ga---gattcttgagaagagtttataaagag 20232447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 32931403 - 32931461
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||||||||||||    | ||||| | |||||||||||||||||||||||    
T  32931403 ggatttagtcccacatcggatagata----tcattcttgagaagagtttataaagaggaggca 32931461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 39587973 - 39587906
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagagga 360  Q
    |||||||||| || ||||||||||||||||| ||| |||||    |||||||| |||||||||||||||||||    
T  39587973 gccaacactcagt-ggatttagtcccacatcagatggatag----gattctagagaagagtttataaagagga 39587906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 358
Target Start/End: Complemental strand, 9596336 - 9596269
Alignment:
Q  287 ggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagag 358  Q
    |||||||||||||| |||||||||| || ||||||||||||     |||||| | |||||||||||||||||    
T  9596336 ggccaacactcggtgggatttagtctcatatcggatagataa----gattcttgagaagagtttataaagag 9596269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 20298618 - 20298560
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||    | ||||||||| ||||| | |||||||||||||||||||||||    
T  20298618 ggatttagtcccacat----ttgatagatattattcttgagaagagtttataaagaggaggca 20298560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 35561686 - 35561726
Alignment:
Q  324 gatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||| |||||| | |||||||||||||||||||||||    
T  35561686 gatagataagattcttgagaagagtttataaagaggaggca 35561726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 45443204 - 45443280
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    |||||| | |||||||||||||||| ||||||    
T  45443204 agcggccaacactcggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagatgaggca 45443280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 17294961 - 17295038
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  17294961 agcggccaacactcgggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 17295038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 362
Target Start/End: Original strand, 18585026 - 18585096
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggagg 362  Q
    ||||||||||||| |||||||||||||||||||||||||||    |||||| | ||||| |||||||||||||||    
T  18585026 gccaacactcggtgggatttagtcccacatcggatagatag----gattcttgagaagattttataaagaggagg 18585096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 12287835 - 12287908
Alignment:
Q  287 ggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||| |||||||||||||||||||||||||||    |||||| |  ||||| ||||||||||||||||    
T  12287835 ggccaacactcggtgggatttagtcccacatcggatagatag----gattcttgaaaagaggttataaagaggaggca 12287908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 45858639 - 45858715
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||    |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  45858639 agcggccaacactcatggggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 45858715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 19937145 - 19937087
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||    
T  19937145 ggatttagtcccacatcggatagataga----attcttgagaagagtttataaagaggaggca 19937087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 28509489 - 28509431
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  28509489 ggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 28509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 364
Target Start/End: Complemental strand, 27958172 - 27958091
Alignment:
Q  279 gcgtcagcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||| ||| ||||||||||||  |||||||||||| |||    |||||||||| |||||| | |||||||||||||||||||||||    
T  27958172 gcgttagcagccaacactcggagggatttagtcccgcat----tagatagataggattcttgagaagagtttataaagaggaggca 27958091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 29228658 - 29228735
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  29228658 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggca 29228735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 29383743 - 29383700
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagata 327  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  29383743 agcggccaacactcgggtggatttagtcccacatcggatagata 29383700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 40642878 - 40642823
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||||||||||||||||||||||||||    |||||| | ||||||||||||||||||||    
T  40642878 ggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggag 40642823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 2697433 - 2697375
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  2697433 ggatttagtcccacatcggatagatag----gactcttgagaagagtttataaagaggaggca 2697375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 4022227 - 4022169
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  4022227 ggatttagtcccacatcggatagatag----gactcttgagaagagtttataaagaggaggca 4022169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 17294850 - 17294895
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatag 328  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  17294850 agcggccaacactcgggtgggatttagtcccacatcggatagatag 17294895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 51722240 - 51722314
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataa-agaggaggca 364  Q
    |||||||||||| | |||||||||||||||||||||||||||    |||||| | ||||||||||||| ||||||||||    
T  51722240 gccaacactcgggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataagagaggaggca 51722314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 29228431 - 29228508
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||| ||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  29228431 agcggccaactctcgggtgggatttagacccacatcggatagatag----gaatcttgagaagagtttataaagaggaggca 29228508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 33562248 - 33562171
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||| | || ||||||||||||||||||||||||    |||||| |  ||||| ||||||||||||||||    
T  33562248 agcggccaacactcgggtgggttttagtcccacatcggatagatag----gattcttgaaaagaggttataaagaggaggca 33562171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 20208196 - 20208159
Alignment:
Q  289 ccaacactcggtaggatttagtcccacatcggatagata 327  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  20208196 ccaacactcggt-ggatttagtcccacatcggatagata 20208159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 20208495 - 20208458
Alignment:
Q  289 ccaacactcggtaggatttagtcccacatcggatagata 327  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  20208495 ccaacactcggt-ggatttagtcccacatcggatagata 20208458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 40521613 - 40521542
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagagg 359  Q
    |||||||||||||||    |||||||||||||||||||||||||     |||||| | ||||||||||||||||||    
T  40521613 agcggccaacactcgaggtgatttagtcccacatcggatagataa----gattcttgagaagagtttataaagagg 40521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 4187403 - 4187358
Alignment:
Q  284 agcggccaacactcg-gtaggatttagtcccacatcggatagatag 328  Q
    |||||||||| |||| || |||||||||||||||||||||||||||    
T  4187403 agcggccaactctcgagtgggatttagtcccacatcggatagatag 4187358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 4187634 - 4187589
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatag 328  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    
T  4187634 agcggccaactctcgggtgggatttagtcccacatcggatagatag 4187589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 31411678 - 31411604
Alignment:
Q  287 ggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||| | |||||||||||||||||    ||||||||| |||||| |  ||||||||||||| ||||||||    
T  31411678 ggccaacactcgggtgggatttagtcccacatc----agatagataggattcttgaaaagagtttataaaaaggaggca 31411604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 38474285 - 38474343
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||| |||||||||||||||    |||||| |  ||||||||||||||||||||||    
T  38474285 ggatttagtcctacatcggatagatag----gattcttgacaagagtttataaagaggaggca 38474343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 45858863 - 45858907
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatag 328  Q
    |||||||||||||||   |||||||||| ||||||||||||||||    
T  45858863 agcggccaacactcgaggggatttagtctcacatcggatagatag 45858907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 22196673 - 22196600
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    ||||||||||||||||| ||||||||||||||||||||||    ||||||| ||| | ||||||||||||||||||||    
T  22196673 agcggccaacactcggtgggatttagtcccacatcggata----gatatgactcttgagaagagtttataaagaggag 22196600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 22196446 - 22196370
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||| |||||||||||||||||||||||||||     | ||| | |||||||||||||||||||||||    
T  22196446 agcggccaacactcggtgggatttagtcccacatcggatagatag----tactcttgagaagagtttataaagaggaggca 22196370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 30329819 - 30329894
Alignment:
Q  284 agcggccaacactcggtagg-atttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggagg 362  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||    |||||| | |||||||||||||||||||||    
T  30329819 agcggccaactctcgggagggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggagg 30329894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 84152 - 84078
Alignment:
Q  287 ggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||| | |||||||||||||||||||||| ||||    |||||| | |||||||||||||||||||||||    
T  84152 ggccaacactcgggtgggatttagtcccacatcggatatatag----gattcttgagaagagtttataaagaggaggca 84078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 83931 - 83854
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||    |||||| | ||| |||||||||||||||||||    
T  83931 agcggccaacactcgggtgggatttagtcccacatcggatatatag----gattcttgagaaaagtttataaagaggaggca 83854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 32395435 - 32395358
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  32395435 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggca 32395358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 363
Target Start/End: Complemental strand, 39668532 - 39668462
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggc 363  Q
    |||||||||| || ||||||||||||||||||||||||||    ||||||| | ||||| ||||||||||||||||    
T  39668532 gccaacactcagt-ggatttagtcccacatcggatagata----tgattcttgagaagaatttataaagaggaggc 39668462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 33040268 - 33040313
Alignment:
Q  284 agcggccaacactcg-gtaggatttagtcccacatcggatagatag 328  Q
    ||||||||||||||| || |||||||||||||||||||||||||||    
T  33040268 agcggccaacactcgcgtgggatttagtcccacatcggatagatag 33040313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 873798 - 873737
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    |||||||||||||||||||||||||||    || ||| | |||||||||||| |||||||||||||    
T  873798 ggatttagtcccacatcggatagatag----gactcttgagaagagtttatagagaggaggcattc 873737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 14769952 - 14769883
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaaga 357  Q
    |||||||||||||||   |||||||||| ||||||||||||||||    |||||| | ||||||||||||||||    
T  14769952 agcggccaacactcgagtggatttagtctcacatcggatagatag----gattcttgagaagagtttataaaga 14769883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 18541934 - 18541978
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatag 328  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||    
T  18541934 agcggccaacacttggtgggatttagtctcacatcggatagatag 18541978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 19439844 - 19439917
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||||||||||||||   |||||||||||||||||    ||||||||| |||||| | ||||| ||||||||||||||    
T  19439844 agcggccaacactcgaggggatttagtcccacatc----agatagataggattcttgagaagaatttataaagaggag 19439917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 37995736 - 37995675
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    |||||||||||||||||||||||||||     | ||| | ||||||||||||||||||||||||||    
T  37995736 ggatttagtcccacatcggatagatagc----actcttgagaagagtttataaagaggaggcattc 37995675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Original strand, 38131766 - 38131827
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||| |||||    
T  38131766 ggatttagtcccacatcggatagatag----gactcttgagaagagtttataaagaggagacattc 38131827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 2471809 - 2471737
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||   |||||||||||||||||||||||||||    | || | | |||||||||||||||||||||||    
T  2471809 gccaacactcgaggggatttagtcccacatcggatagatag----ggtttttgagaagagtttataaagaggaggca 2471737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 33040453 - 33040498
Alignment:
Q  284 agcggccaacactcg-gtaggatttagtcccacatcggatagatag 328  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||    
T  33040453 agcggccaacactcgcgtgggatttagtcccacatcagatagatag 33040498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 29396464 - 29396387
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | ||||||||||||||||| |||||||||    || ||| | ||| |||||||||||||||||||    
T  29396464 agcggccaactctcgggtgggatttagtcccacatcagatagatag----gaatcttgagaaaagtttataaagaggaggca 29396387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 36020797 - 36020876
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||| |||  ||||||||||| ||||||||||| |||||||||||| | | |||||||||||||||||||||||    
T  36020797 agcggccaacattcgagaggatttagtctcacatcggata-atagatatgatttttgagaagagtttataaagaggaggca 36020876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 360
Target Start/End: Original strand, 9179112 - 9179189
Alignment:
Q  279 gcgtcagcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagagga 360  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| |    ||||||  | |||||||||||||||||||    
T  9179112 gcgttagcggccaacactcggtgggatttagtcccacatcggatagaca----tgattcatgagaagagtttataaagagga 9179189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 53966216 - 53966293
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  53966216 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 53966293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 48511531 - 48511451
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || ||| | ||||||||||||||||||||||||||    
T  48511531 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggcattc 48511451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 9180352 - 9180425
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||||||||| |||| | |||||||||||||||||||||||||||    |||||| | ||| ||||||||||||||||    
T  9180352 agcggccaaccctcgatcggatttagtcccacatcggatagatag----gattcttgagaaaagtttataaagaggag 9180425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 10450765 - 10450692
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||| | ||||||||||||||||||||||||||| |    |||| | |||||||||||||||||||||||    
T  10450765 gccaacactcgggtgggatttagtcccacatcggatagataggt----ttcttgagaagagtttataaagaggaggca 10450692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 48837124 - 48837084
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatag 328  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  48837124 gccaacactcggtgggatttagtcccacatcggatagatag 48837084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 10856746 - 10856670
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||| ||| ||| ||||||||||||||||||||| |||||    |||||| |  ||||||||||||||||||||||    
T  10856746 agcggccaatacttggtgggatttagtcccacatcggatggatag----gattcttgaaaagagtttataaagaggaggca 10856670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 24453762 - 24453838
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||   |||||||||||||||||||||||||||    | |||| | |||||||||||||| ||||||||    
T  24453762 agcggccaacactcgaggggatttagtcccacatcggatagatag----ggttcttgagaagagtttataaacaggaggca 24453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 9178893 - 9178964
Alignment:
Q  286 cggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    ||||||||||||||| | ||||||||||| |||||||||||||    ||||||   ||||||||||||||||||||    
T  9178893 cggccaacactcggtggaatttagtcccatatcggatagatag----gattcttaagaagagtttataaagaggag 9178964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 11244656 - 11244585
Alignment:
Q  290 caacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| | ||||||||||||||||||||||||||| |    |||| | |||||||||||||||||||||||    
T  11244656 caacactcgggtgggatttagtcccacatcggatagataggt----ttcttgagaagagtttataaagaggaggca 11244585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 15820722 - 15820652
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||||||||||| | |||||||||||||||||||||||||||    |||||| | ||||||||||||| ||||||    
T  15820722 gccaacactcgggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataacgaggag 15820652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 48511741 - 48511683
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  48511741 ggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggca 48511683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 354
Target Start/End: Complemental strand, 51734672 - 51734611
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataa 354  Q
    ||||||||||||| |||||||||||||||||||||||||||    |||||| | |||||||||||||    
T  51734672 gccaacactcggt-ggatttagtcccacatcggatagatag----gattcttgagaagagtttataa 51734611  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 54369041 - 54369099
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  54369041 ggatttagtcccacatcggatagatag----gactcttgagaagagtttataaagaggaggca 54369099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 10450541 - 10450468
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||| | |||||||||||||||||||||||||||    | |||| | ||||||||||||| |||||||||    
T  10450541 gccaacactcgggtgggatttagtcccacatcggatagatag----gtttcttgagaagagtttataacgaggaggca 10450468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 40770032 - 40769959
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||||||||||||||   ||||||||||||||||||||||    ||||||||| | | |||||||| |||||||||||    
T  40770032 agcggccaacactcgaggggatttagtcccacatcggata----gatatgattattgtgaagagttcataaagaggag 40769959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 10453818 - 10453747
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||| ||| ||||||||||||| |||||||||||||    |||||| | |||| ||||||||||||||||||    
T  10453818 gccaacacttggt-ggatttagtcccagatcggatagatag----gattcttgagaagggtttataaagaggaggca 10453747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 16045490 - 16045451
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggata 323  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  16045490 agcggccaacactcgatgggatttagtcccacatcggata 16045451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 16061005 - 16060966
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggata 323  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  16061005 agcggccaacactcgatgggatttagtcccacatcggata 16060966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 2800073 - 2800037
Alignment:
Q  291 aacactcggtaggatttagtcccacatcggatagatag 328  Q
    |||||||||| |||||||||||||||||||||||||||    
T  2800073 aacactcggt-ggatttagtcccacatcggatagatag 2800037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 43101473 - 43101415
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||| |||||||||    || ||| | |||||||||||||||||||||||    
T  43101473 ggatttagtcccacatcagatagatag----gactcttgagaagagtttataaagaggaggca 43101415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 42576278 - 42576318
Alignment:
Q  287 ggccaacactcggtaggatttagtcccacatcggatagata 327  Q
    |||||||||| ||| ||||||||||||||||||||| ||||    
T  42576278 ggccaacacttggtgggatttagtcccacatcggattgata 42576318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 4506156 - 4506087
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    ||||||||||||| |||||||||||||||||||||||||||    |||||| | ||||||||||||||||||||    
T  4506156 gccaacactcggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggag 4506087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 10862178 - 10862102
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||   |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  10862178 agcggccaacactcgaggggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 10862102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 33532853 - 33532780
Alignment:
Q  287 ggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||   |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  33532853 ggccaacactcgaggggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 33532780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 4342378 - 4342302
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||| || ||||||||||||||||||||||||||||    ||||| | | |||||| ||||||||||||||    
T  4342378 agcggccaacactcagtgggatttagtcccacatcggatagataga----attcttgaggagagttaataaagaggaggca 4342302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 11349910 - 11349837
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||| | ||||||||||||||||||||||||||| |    |||| | |||||||||||||||||||||||    
T  11349910 gccaacactcgggtgggatttagtcccacatcggatagataggt----ttcttgagaagagtttataaagaggaggca 11349837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 28193695 - 28193619
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||   |||||||||||||||||    ||||||||| |||||| | ||||| |||||||||||||||||    
T  28193695 agcggccaacactcgaggggatttagtcccacatc----agatagataggattcttgagaagattttataaagaggaggca 28193619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 28193453 - 28193379
Alignment:
Q  286 cggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||   |||||||||| ||||||||||||||||    |||||| | |||||||||||||| ||||||||    
T  28193453 cggccaacactcgaggggatttagtctcacatcggatagatag----gattcttgagaagagtttataaataggaggca 28193379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 3976573 - 3976515
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||||||||||||   || ||||| | |||||||||||||||||||||||    
T  3976573 ggatttagtcccacatcggatagata---at-attcttgagaagagtttataaagaggaggca 3976515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 11350304 - 11350231
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||| | ||||||||||||| ||||||||||||| |    |||| | |||||||||||||||||||||||    
T  11350304 gccaacactcgggtgggatttagtcccatatcggatagataggt----ttcttgagaagagtttataaagaggaggca 11350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 14280267 - 14280340
Alignment:
Q  288 gccaacactc-ggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||| |||||||||||||||| ||||||||||    |||||  | |||||||||||||||||||||||    
T  14280267 gccaacactcaggtgggatttagtcccacattggatagatag----gattcatgagaagagtttataaagaggaggca 14280340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 15962278 - 15962201
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || ||| | ||| |||||||||||||||||||    
T  15962278 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaatcttgagaatagtttataaagaggaggca 15962201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 39420680 - 39420757
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || | | | |||||||||||||||||||||||    
T  39420680 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaattttgagaagagtttataaagaggaggca 39420757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 10861954 - 10861878
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||   ||||||||||||| || ||||| ||||    |||||| | |||||||||||||||||||||||    
T  10861954 agcggccaacactcgaggggatttagtcccatattggatatatag----gattcttgagaagagtttataaagaggaggca 10861878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 327
Target Start/End: Original strand, 10862290 - 10862333
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagata 327  Q
    |||||||||||||||   ||||||||||||||||||||||||||    
T  10862290 agcggccaacactcgaggggatttagtcccacatcggatagata 10862333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 15961921 - 15961876
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatag 328  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    
T  15961921 agcggccaactctcgggtgggatttagtcccacatcggatagatag 15961876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 23054328 - 23054386
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||||    |||||||||| | ||| | |||||||||||||||||||||||    
T  23054328 ggatttagtcccacatc----agatagatataactcttgagaagagtttataaagaggaggca 23054386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 32810993 - 32810923
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||||||||||| | |||||||||||| ||||||||||||||    |||||| |  |||||||||||||||||||    
T  32810993 gccaacactcgggtgggatttagtcccgcatcggatagatag----gattcttgataagagtttataaagaggag 32810923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 32196894 - 32196938
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatag 328  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||||    
T  32196894 agcggtcaacactcggtggaatttagtctcacatcggatagatag 32196938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 36161449 - 36161391
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||||||||   ||||| |||||| | |||||||||| ||||||||||||    
T  36161449 ggatttagtcccacatcggata---agataggattcttgagaagagttta-aaagaggaggca 36161391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 33912027 - 33912103
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    ||| || | |||||||||||||||||||||||    
T  33912027 agcggccaacactcggtgggatttagtcccacatcgggtagatag----gatacttgagaagagtttataaagaggaggca 33912103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 4026058 - 4026136
Alignment:
Q  285 gcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    ||||||||||||| || |||||||||||||||||||||||||||    |||||| | |||||||||||||| | |||||||||    
T  4026058 gcggccaacactcagtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaatatgaggcattc 4026136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 11290152 - 11290232
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    || ||| | ||||||||||||||||||||||||||    
T  11290152 agcggccaactctcgggtgggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggcattc 11290232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 46529039 - 46528967
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||| |||||||||| |||||||||||||| |    |||||| | |||||||||||||||||||||||    
T  46529039 gccaacactcggtgggatttagtctcacatcggatagattg----gattcttgagaagagtttataaagaggaggca 46528967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 52810972 - 52810931
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggataga 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  52810972 agcggccaacactcggtgggatttagtcccacatcggataga 52810931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 26941845 - 26941889
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatag 328  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||    
T  26941845 agcggccaacactcggtgggatttagtcccacatcgaatagatag 26941889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 37097851 - 37097778
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    |||| |||||||||||| |||||||||||||||||    ||||||||| |||||| | ||||| ||||||||||||||    
T  37097851 agcgaccaacactcggtgggatttagtcccacatc----agatagataggattcttgagaagattttataaagaggag 37097778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 37288985 - 37288916
Alignment:
Q  288 gccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    ||||||| ||||| ||||||||||||||||||||||    ||||||||||| | |||||||||||||| |||||    
T  37288985 gccaacaatcggtgggatttagtcccacatcggata----gatatgattcttgagaagagtttataaaaaggag 37288916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 50868115 - 50868054
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    |||||||||||||||||||||||||||    || ||| | ||||||||||||||||||||||||||    
T  50868115 ggatttagtcccacatcggatagatag----gaatcttgagaagagtttataaagaggaggcattc 50868054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 51469483 - 51469541
Alignment:
Q  302 ggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||||||||||||||    || ||| | |||||||||||||||||||||||    
T  51469483 ggatttagtcccacatcggatagatag----gactcttgagaagagtttataaagaggaggca 51469541  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 2016519 - 2016592
Alignment:
Q  287 ggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||   |||||||||| |||||| |||||||||    |||||| | |||||||||||||||||||||||    
T  2016519 ggccaacactcgaggggatttagtctcacatcagatagatag----gattcttgagaagagtttataaagaggaggca 2016592  T

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Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 367
Target Start/End: Original strand, 23018490 - 23018533
Alignment:
Q  324 gatagatatgattctagggaagagtttataaagaggaggcattc 367  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||    
T  23018490 gatagatatgactcttgagaagagtttataaagaggaggcattc 23018533  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 52810745 - 52810672
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggag 361  Q
    ||||||||||||||  | | ||||||||| ||||||||||||||     |||||| | ||||||||||||||||||||    
T  52810745 agcggccaacactcaatggaatttagtcctacatcggatagataa----gattcttgagaagagtttataaagaggag 52810672  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 33396290 - 33396367
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    ||||||||||||| || | |||||||||||||||||||||||||||    |||||| | |||||||||||||||||||||||    
T  33396290 agcggccaacactagggtgggatttagtcccacatcggatagatag----gattcttgagaagagtttataaagaggaggca 33396367  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 26842707 - 26842780
Alignment:
Q  288 gccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||| | ||||||||||||||||||||||||||| |    |||| | |||||||||||||||||||||||    
T  26842707 gccaacactcgggtgggatttagtcccacatcggatagataggt----ttcttgagaagagtttataaagaggaggca 26842780  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 33396509 - 33396585
Alignment:
Q  284 agcggccaacactcgg-taggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||    |||| | | |||||||||||||||||||||||    
T  33396509 agcggccaacactcgggtgggatttagtcc-acatcggatagatag----gatttttgagaagagtttataaagaggaggca 33396585  T

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Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 165768 - 165844
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacatcggatagatagatatgattctagggaagagtttataaagaggaggca 364  Q
    |||||||||||||||   ||||||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||||    
T  165768 agcggccaacactcgaggggatttagtcctacatcggatagataga----attcttgagaagagtttataaagaggaggca 165844  T

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Target: scaffold0785 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 317
Target Start/End: Complemental strand, 3016 - 2983
Alignment:
Q  284 agcggccaacactcggtaggatttagtcccacat 317  Q
    ||||||||||||||||| ||||||||||||||||    
T  3016 agcggccaacactcggtgggatttagtcccacat 2983  T

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