View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2382_low_12 (Length: 251)
Name: NF2382_low_12
Description: NF2382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2382_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 2907462 - 2907226
Alignment:
| Q |
1 |
acttctataataacaatgccacaaatattcacttgtcttttccaattcaatgaaatataagtaattgtataaaaactagcatggaaaattaagataagga |
100 |
Q |
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| T |
2907462 |
acttctataataacaatgccacaaatattcacttgtcttttccaattcaatgaaatataagtaattgtataaaaactagcatggaaaattaagataagga |
2907363 |
T |
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| Q |
101 |
gcttgtgaat-aaaagccaatacaatgatacaaacattgaatatcgaacatagagattaacataaca----cacactcacacatttttcttcaatgagta |
195 |
Q |
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|||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
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| T |
2907362 |
gcttgtgaataaaaagtcaatacaatgatacaaacattgaatatcaaacatagagataaacataacacactcacactcacacatttttcttcaatgagta |
2907263 |
T |
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| Q |
196 |
caaattaaaatgaaactacattgatggtacaaagagt |
232 |
Q |
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|||||||||||||| ||||||||||||||||||||| |
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| T |
2907262 |
caaattaaaatgaagttacattgatggtacaaagagt |
2907226 |
T |
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