View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2382_low_18 (Length: 215)
Name: NF2382_low_18
Description: NF2382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2382_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 24790721 - 24790869
Alignment:
| Q |
48 |
ttcctccgaaacctctctctcaacacagccaacttcctcagctccgtaaccaccgccacatcagcaaccctcatcttctctgcatcccaaggtgaatgcg |
147 |
Q |
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| T |
24790721 |
ttcctccgaaacctctctctcaacacagccagcttcctcagctccgtcaccaccgccacgtcagcaaccctcatcttctctgcatcccaaggtgaatgcg |
24790820 |
T |
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| Q |
148 |
cttcttgtaacttcacataagctctcttcatagacgacaccgtttcgaa |
196 |
Q |
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||||||||||||||||||| |||||||||||||| |||||||||||||| |
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| T |
24790821 |
cttcttgtaacttcacatacgctctcttcatagaagacaccgtttcgaa |
24790869 |
T |
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