View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2384_high_1 (Length: 251)

Name: NF2384_high_1
Description: NF2384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2384_high_1
NF2384_high_1
[»] chr8 (42 HSPs)
chr8 (1-88)||(5212337-5212424)
chr8 (1-88)||(17741758-17741845)
chr8 (1-88)||(18029437-18029524)
chr8 (1-88)||(36912463-36912550)
chr8 (3-88)||(30470758-30470843)
chr8 (1-88)||(30289668-30289755)
chr8 (1-88)||(34955604-34955691)
chr8 (1-88)||(5735333-5735420)
chr8 (1-88)||(7990477-7990564)
chr8 (1-88)||(41477229-41477316)
chr8 (1-87)||(12272419-12272505)
chr8 (1-87)||(31129439-31129526)
chr8 (1-88)||(38584832-38584919)
chr8 (1-88)||(39810996-39811083)
chr8 (1-88)||(42860760-42860847)
chr8 (1-87)||(43524328-43524414)
chr8 (1-87)||(17494492-17494578)
chr8 (3-88)||(26632092-26632178)
chr8 (1-88)||(13814993-13815080)
chr8 (1-76)||(24431804-24431879)
chr8 (1-88)||(29637093-29637180)
chr8 (6-87)||(35099483-35099564)
chr8 (1-88)||(4625432-4625519)
chr8 (1-88)||(30532388-30532474)
chr8 (1-87)||(40283523-40283609)
chr8 (1-87)||(42859973-42860059)
chr8 (1-87)||(43525026-43525112)
chr8 (1-87)||(45100962-45101048)
chr8 (1-87)||(1958117-1958203)
chr8 (29-88)||(8609947-8610006)
chr8 (1-87)||(15053680-15053766)
chr8 (1-87)||(26244545-26244631)
chr8 (1-87)||(29731742-29731828)
chr8 (1-87)||(38206951-38207037)
chr8 (1-87)||(44149918-44150004)
chr8 (1-87)||(35931910-35931995)
chr8 (1-87)||(13947414-13947500)
chr8 (1-87)||(23549761-23549847)
chr8 (28-88)||(26749373-26749433)
chr8 (1-83)||(44503219-44503301)
chr8 (6-87)||(43618291-43618372)
chr8 (1-87)||(1634778-1634864)
[»] chr5 (45 HSPs)
chr5 (1-88)||(8176241-8176328)
chr5 (1-88)||(10569748-10569835)
chr5 (1-88)||(34918416-34918503)
chr5 (158-238)||(34918565-34918643)
chr5 (1-88)||(4577051-4577138)
chr5 (1-88)||(41152944-41153031)
chr5 (1-88)||(14278875-14278962)
chr5 (1-88)||(25652859-25652946)
chr5 (1-83)||(27406979-27407061)
chr5 (1-88)||(27407682-27407769)
chr5 (1-88)||(41263408-41263495)
chr5 (1-88)||(15972613-15972700)
chr5 (1-87)||(3454784-3454869)
chr5 (1-87)||(4938233-4938318)
chr5 (1-87)||(32976514-32976599)
chr5 (1-87)||(4219382-4219468)
chr5 (1-88)||(11954823-11954910)
chr5 (1-87)||(13479761-13479847)
chr5 (1-87)||(23089566-23089652)
chr5 (1-87)||(27942539-27942625)
chr5 (1-87)||(40888942-40889028)
chr5 (6-87)||(31013786-31013867)
chr5 (1-88)||(25032399-25032487)
chr5 (1-87)||(30648047-30648136)
chr5 (1-88)||(42607981-42608069)
chr5 (5-88)||(8681230-8681313)
chr5 (1-87)||(19241364-19241450)
chr5 (1-87)||(25670843-25670929)
chr5 (1-87)||(29618951-29619037)
chr5 (1-87)||(36572357-36572443)
chr5 (1-87)||(42317936-42318021)
chr5 (4-88)||(37882372-37882456)
chr5 (1-87)||(7651051-7651137)
chr5 (1-88)||(34529320-34529407)
chr5 (1-87)||(39238462-39238548)
chr5 (1-88)||(12912916-12913004)
chr5 (1-83)||(31008322-31008404)
chr5 (1-87)||(32363552-32363638)
chr5 (1-87)||(34709925-34710010)
chr5 (1-87)||(39008528-39008614)
chr5 (1-87)||(42806937-42807023)
chr5 (1-47)||(9274419-9274465)
chr5 (1-51)||(23649105-23649155)
chr5 (1-51)||(23809416-23809466)
chr5 (1-87)||(36609347-36609442)
[»] chr4 (53 HSPs)
chr4 (1-88)||(10089894-10089981)
chr4 (1-88)||(39533219-39533306)
chr4 (3-88)||(40596702-40596787)
chr4 (1-88)||(47750164-47750250)
chr4 (3-88)||(54356836-54356921)
chr4 (1-88)||(31848712-31848799)
chr4 (1-88)||(33526764-33526851)
chr4 (1-88)||(53347998-53348085)
chr4 (1-85)||(36656608-36656692)
chr4 (1-88)||(55408506-55408594)
chr4 (1-87)||(23540363-23540449)
chr4 (3-88)||(53184036-53184121)
chr4 (1-87)||(34199206-34199292)
chr4 (1-88)||(39113693-39113780)
chr4 (1-88)||(51392276-51392363)
chr4 (1-87)||(18469305-18469390)
chr4 (1-87)||(45081348-45081435)
chr4 (1-87)||(48403836-48403923)
chr4 (1-87)||(3533244-3533330)
chr4 (1-87)||(8991832-8991918)
chr4 (1-88)||(12158185-12158272)
chr4 (1-87)||(13094327-13094413)
chr4 (1-88)||(19409178-19409265)
chr4 (1-87)||(27863764-27863850)
chr4 (1-87)||(28899381-28899467)
chr4 (1-87)||(33523319-33523406)
chr4 (1-87)||(33604706-33604792)
chr4 (9-88)||(39049029-39049108)
chr4 (1-87)||(40721084-40721170)
chr4 (6-87)||(2215224-2215305)
chr4 (1-87)||(3618391-3618476)
chr4 (1-87)||(52017393-52017481)
chr4 (1-87)||(6290649-6290735)
chr4 (1-87)||(16020896-16020982)
chr4 (1-87)||(16174952-16175038)
chr4 (1-83)||(33077811-33077893)
chr4 (1-87)||(38173604-38173690)
chr4 (1-87)||(48506543-48506629)
chr4 (1-87)||(52772802-52772888)
chr4 (6-87)||(27142272-27142353)
chr4 (1-87)||(34463961-34464046)
chr4 (6-87)||(46917453-46917534)
chr4 (1-62)||(56054089-56054151)
chr4 (1-87)||(13110610-13110696)
chr4 (1-87)||(19272832-19272918)
chr4 (1-87)||(35809212-35809298)
chr4 (1-87)||(55560416-55560502)
chr4 (1-88)||(34564171-34564258)
chr4 (1-87)||(23389865-23389952)
chr4 (1-57)||(55854-55910)
chr4 (1-51)||(17329849-17329899)
chr4 (11-87)||(4981558-4981634)
chr4 (28-76)||(39418284-39418332)
[»] chr3 (71 HSPs)
chr3 (1-88)||(50033715-50033802)
chr3 (1-88)||(42601443-42601530)
chr3 (2-88)||(15493761-15493847)
chr3 (1-87)||(20139410-20139497)
chr3 (1-88)||(33795433-33795520)
chr3 (1-88)||(37410357-37410444)
chr3 (1-88)||(41890582-41890669)
chr3 (1-88)||(49357435-49357522)
chr3 (1-88)||(42601809-42601896)
chr3 (1-88)||(51427148-51427235)
chr3 (1-88)||(28410442-28410530)
chr3 (1-88)||(35853129-35853217)
chr3 (1-88)||(49710326-49710414)
chr3 (1-88)||(25450572-25450659)
chr3 (5-88)||(25832666-25832749)
chr3 (1-88)||(46572863-46572950)
chr3 (9-88)||(49823116-49823195)
chr3 (12-87)||(139025-139101)
chr3 (1-88)||(43022696-43022784)
chr3 (1-88)||(33935039-33935125)
chr3 (1-88)||(35423947-35424034)
chr3 (1-88)||(47701000-47701087)
chr3 (1-88)||(49147226-49147313)
chr3 (1-88)||(49407275-49407362)
chr3 (1-76)||(53722452-53722526)
chr3 (1-87)||(55026789-55026875)
chr3 (1-87)||(30418367-30418452)
chr3 (1-88)||(30862734-30862822)
chr3 (1-88)||(50017101-50017182)
chr3 (1-87)||(6048633-6048719)
chr3 (1-76)||(26550073-26550147)
chr3 (1-85)||(33748736-33748822)
chr3 (1-87)||(50415767-50415853)
chr3 (1-87)||(51304388-51304474)
chr3 (1-77)||(10426368-10426444)
chr3 (1-77)||(48886923-48886999)
chr3 (1-87)||(6832434-6832521)
chr3 (1-87)||(11908069-11908155)
chr3 (1-87)||(12974718-12974805)
chr3 (9-87)||(25790720-25790798)
chr3 (1-87)||(26165491-26165577)
chr3 (1-87)||(32120375-32120461)
chr3 (1-87)||(41183324-41183410)
chr3 (1-87)||(42258376-42258463)
chr3 (6-87)||(5845082-5845163)
chr3 (6-87)||(17466565-17466646)
chr3 (6-87)||(47144223-47144304)
chr3 (1-87)||(51999173-51999260)
chr3 (1-87)||(4046030-4046116)
chr3 (1-87)||(27847459-27847545)
chr3 (1-87)||(29701732-29701818)
chr3 (1-87)||(36178641-36178727)
chr3 (1-87)||(42560951-42561037)
chr3 (1-87)||(44084359-44084444)
chr3 (1-76)||(50176024-50176098)
chr3 (1-51)||(35472577-35472627)
chr3 (1-45)||(7008105-7008149)
chr3 (1-87)||(28155163-28155251)
chr3 (1-76)||(50734077-50734152)
chr3 (1-76)||(50778703-50778778)
chr3 (1-52)||(43473970-43474021)
chr3 (9-88)||(44995266-44995345)
chr3 (1-56)||(51973545-51973600)
chr3 (15-76)||(38572105-38572166)
chr3 (1-51)||(46137101-46137151)
chr3 (1-88)||(7521075-7521162)
chr3 (2-45)||(21225274-21225317)
chr3 (1-80)||(30692357-30692434)
chr3 (1-87)||(52000000-52000085)
chr3 (1-75)||(37183002-37183074)
chr3 (1-41)||(45351958-45351998)
[»] chr1 (46 HSPs)
chr1 (1-88)||(17783421-17783508)
chr1 (1-88)||(44451208-44451295)
chr1 (1-88)||(44651117-44651204)
chr1 (1-88)||(52933706-52933793)
chr1 (1-88)||(52941341-52941428)
chr1 (9-88)||(44929236-44929315)
chr1 (1-87)||(45456088-45456174)
chr1 (1-88)||(643760-643847)
chr1 (1-88)||(8464143-8464230)
chr1 (1-88)||(20584789-20584876)
chr1 (1-87)||(37822616-37822702)
chr1 (1-80)||(41542380-41542459)
chr1 (1-88)||(44334333-44334420)
chr1 (1-87)||(48404376-48404462)
chr1 (1-88)||(45239183-45239270)
chr1 (1-87)||(33164458-33164544)
chr1 (1-87)||(8468370-8468456)
chr1 (1-87)||(23092815-23092901)
chr1 (1-87)||(31159433-31159519)
chr1 (1-87)||(36230403-36230489)
chr1 (1-88)||(36303026-36303113)
chr1 (1-88)||(40500443-40500530)
chr1 (1-87)||(48388045-48388131)
chr1 (1-88)||(48729366-48729453)
chr1 (1-87)||(2478266-2478351)
chr1 (6-87)||(37646502-37646583)
chr1 (7-87)||(47300440-47300520)
chr1 (1-87)||(14096737-14096823)
chr1 (1-87)||(29919416-29919503)
chr1 (1-87)||(51494409-51494495)
chr1 (1-51)||(17681198-17681248)
chr1 (6-87)||(31468179-31468260)
chr1 (6-87)||(37420286-37420367)
chr1 (1-87)||(19578846-19578933)
chr1 (1-87)||(29523749-29523835)
chr1 (6-87)||(27630402-27630483)
chr1 (1-51)||(30878480-30878530)
chr1 (1-51)||(45362789-45362839)
chr1 (1-87)||(37691227-37691313)
chr1 (1-87)||(45623467-45623553)
chr1 (3-83)||(51156827-51156906)
chr1 (1-88)||(3754961-3755053)
chr1 (1-51)||(10266897-10266947)
chr1 (1-83)||(51520267-51520351)
chr1 (1-87)||(43739026-43739112)
chr1 (1-51)||(39149153-39149203)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-88)||(30476-30563)
[»] chr7 (36 HSPs)
chr7 (1-88)||(30630752-30630839)
chr7 (1-86)||(26013137-26013222)
chr7 (1-88)||(21654893-21654980)
chr7 (1-88)||(24793538-24793625)
chr7 (1-88)||(38970080-38970167)
chr7 (1-88)||(22191267-22191353)
chr7 (1-88)||(22737533-22737620)
chr7 (1-88)||(25218746-25218833)
chr7 (1-88)||(43571031-43571119)
chr7 (1-88)||(48984954-48985041)
chr7 (1-87)||(36518564-36518649)
chr7 (1-87)||(33078722-33078808)
chr7 (1-88)||(35193057-35193144)
chr7 (1-87)||(39769778-39769864)
chr7 (1-88)||(114537-114624)
chr7 (1-88)||(25038531-25038618)
chr7 (1-87)||(30566649-30566735)
chr7 (1-83)||(32748850-32748932)
chr7 (1-87)||(40302428-40302514)
chr7 (1-87)||(42881407-42881493)
chr7 (1-76)||(43202074-43202149)
chr7 (1-87)||(45549556-45549642)
chr7 (6-87)||(35029051-35029132)
chr7 (1-87)||(30720169-30720255)
chr7 (6-87)||(5813147-5813228)
chr7 (6-87)||(47159437-47159518)
chr7 (3-87)||(20354272-20354356)
chr7 (1-87)||(26812162-26812249)
chr7 (1-87)||(33508462-33508549)
chr7 (1-87)||(37951798-37951884)
chr7 (1-87)||(1940609-1940695)
chr7 (1-51)||(28317981-28318031)
chr7 (3-51)||(37887932-37887980)
chr7 (1-77)||(32130207-32130284)
chr7 (1-51)||(22656752-22656802)
chr7 (1-46)||(2414690-2414735)
[»] chr2 (36 HSPs)
chr2 (1-88)||(36855712-36855799)
chr2 (1-88)||(37245549-37245636)
chr2 (1-88)||(927830-927917)
chr2 (1-88)||(9074163-9074250)
chr2 (1-87)||(39490193-39490278)
chr2 (1-87)||(1073021-1073107)
chr2 (1-88)||(5146649-5146736)
chr2 (1-76)||(6333327-6333402)
chr2 (1-87)||(13151421-13151508)
chr2 (1-88)||(31192922-31193009)
chr2 (1-88)||(38901768-38901855)
chr2 (1-88)||(39433950-39434037)
chr2 (24-88)||(1987167-1987231)
chr2 (1-87)||(6363003-6363090)
chr2 (1-88)||(31174124-31174211)
chr2 (1-87)||(36209413-36209498)
chr2 (1-87)||(9117862-9117948)
chr2 (25-87)||(43495679-43495741)
chr2 (1-87)||(7588440-7588526)
chr2 (1-87)||(22351552-22351638)
chr2 (1-87)||(43021791-43021877)
chr2 (6-87)||(4296714-4296795)
chr2 (6-87)||(24997130-24997211)
chr2 (9-87)||(12855069-12855147)
chr2 (1-83)||(17929193-17929275)
chr2 (9-87)||(30822529-30822607)
chr2 (1-87)||(44280042-44280128)
chr2 (6-87)||(8852107-8852188)
chr2 (1-87)||(16218803-16218889)
chr2 (1-84)||(1308635-1308718)
chr2 (1-87)||(17485867-17485953)
chr2 (10-87)||(14152013-14152091)
chr2 (1-87)||(7763427-7763511)
chr2 (1-75)||(14383029-14383103)
chr2 (1-83)||(36526875-36526957)
chr2 (1-88)||(2780682-2780762)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-88)||(124060-124147)
[»] chr6 (23 HSPs)
chr6 (1-88)||(6380427-6380514)
chr6 (1-88)||(6725562-6725650)
chr6 (1-87)||(12512961-12513047)
chr6 (1-87)||(30446292-30446378)
chr6 (1-87)||(8669938-8670023)
chr6 (16-88)||(29428471-29428543)
chr6 (1-87)||(8218993-8219079)
chr6 (1-87)||(12501880-12501966)
chr6 (1-87)||(34838629-34838714)
chr6 (1-89)||(34242352-34242440)
chr6 (1-61)||(22627910-22627970)
chr6 (1-87)||(10883920-10884006)
chr6 (1-87)||(26654273-26654359)
chr6 (1-87)||(26760243-26760329)
chr6 (9-87)||(631566-631644)
chr6 (1-87)||(24348481-24348567)
chr6 (6-87)||(197852-197933)
chr6 (6-87)||(2503273-2503354)
chr6 (6-87)||(34328329-34328410)
chr6 (1-87)||(17961201-17961287)
chr6 (1-87)||(24933219-24933307)
chr6 (5-88)||(32359792-32359876)
chr6 (24-83)||(25834616-25834675)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-87)||(66009-66095)
[»] scaffold0054 (2 HSPs)
scaffold0054 (1-87)||(57680-57766)
scaffold0054 (1-51)||(55144-55194)
[»] scaffold0362 (1 HSPs)
scaffold0362 (1-87)||(5260-5346)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-87)||(170557-170650)


Alignment Details
Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5212424 - 5212337
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5212424 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtgttgaata 5212337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17741845 - 17741758
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  17741845 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtattgaata 17741758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18029437 - 18029524
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  18029437 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 18029524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36912550 - 36912463
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  36912550 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 36912463  T

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Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 30470758 - 30470843
Alignment:
Q  3 aataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  30470758 aataagaataaaaaataaaaaatggtggggtagagtgttgaatgaaaaaccattgaagagagtaaaagttgaatgagtgttgaata 30470843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30289668 - 30289755
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||| || |||||||    
T  30289668 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaacaattggagagggtaaaagttgaatgtgtattgaata 30289755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34955604 - 34955691
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  34955604 taaataagaataagaaataaaaagtggtggggtagaatgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 34955691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5735420 - 5735333
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  5735420 taaataagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaaccattggagagggtaaaaattgaatgagtgttgaata 5735333  T

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Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7990564 - 7990477
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| ||||||||  |||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  7990564 taaataagaataataaataaaaagtggtggggtaaagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 7990477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41477316 - 41477229
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||    
T  41477316 taaataagaataagaaataaaaagtggaggggtagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaata 41477229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12272419 - 12272505
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  12272419 taaataagaataagaaataaaagatggtggggtagaatgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 12272505  T

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Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31129439 - 31129526
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||| ||||    
T  31129439 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaatcattagagatggtaaaagttgaatgagtgtcgaat 31129526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38584832 - 38584919
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||| | |||||||||||| ||||||||||||    
T  38584832 taaataagaataagaaataaaaagtggtggggtaaagtgttgaatgaaaaaccattggagtgggtaaaagttgaacgagtgttgaata 38584919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39810996 - 39811083
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  || ||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  39810996 taaataagaataagaaataaaaagtgatggggtaaagtgttgaatgaaaaactattggagagggtaaaagttgaatgagtgttgaata 39811083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42860847 - 42860760
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||  |||| |||||||||||||||||||    
T  42860847 taaataagaataagaaataaaaagtggtggggtggagtgttgaatgaaaaaccattggagaggttaaatgttgaatgagtgttgaata 42860760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43524328 - 43524414
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||||||    
T  43524328 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggagag-gtaaaaattgaatgagtgttgaat 43524414  T

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Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17494492 - 17494578
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||    
T  17494492 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttcaatgattgttgaat 17494578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 26632092 - 26632178
Alignment:
Q  3 aataagaataagaaa-taaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||| ||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26632092 aataagaataaaaaaataaaaaatgatagggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaata 26632178  T

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Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13815080 - 13814993
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||| ||||| ||||||| |||||||||||    
T  13815080 taaataagaataggaaataaaaagtggtggggtagaatgttgaatgaaaaaccattggagagggtaaatgttgaattagtgttgaata 13814993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24431804 - 24431879
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaat 76  Q
    ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  24431804 taaataagaataagaaataaaaagtggtggagtaaagtgttgaatgaaaaatcattggagagggtaaaagttgaat 24431879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29637093 - 29637180
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||  |||| |||| |||||||||||||||||||| ||||    
T  29637093 taaataagaataataaataaaatgtggtggggtagagtgttgaatgaaaaactattgaagagggtaaaagttgaatgagtgttaaata 29637180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 35099564 - 35099483
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  35099564 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggagag-gtaaaaattgaatgagtgttgaat 35099483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4625432 - 4625519
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||  ||||||||  |||||||||| |||||||||||||||| |||||||||   ||||||||||||||||||||||||    
T  4625432 taaataagaatagaaaataaaaagtggtggggtatagtgttgaatgaaaaaccattggagatgataaaagttgaatgagtgttgaata 4625519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30532388 - 30532474
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| |||  | |||||||||||| |||||||||    
T  30532388 taaataagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaatcattggtgagtat-aaagttgaatgaatgttgaata 30532474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40283609 - 40283523
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||| |||||||||    
T  40283609 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgggtgttgaat 40283523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42860059 - 42859973
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||  |||||| |||||||||||||||||    
T  42860059 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggaga-tgtaaaaattgaatgagtgttgaat 42859973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43525026 - 43525112
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  43525026 taaataagaataagaaataaaagatggctgggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 43525112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45100962 - 45101048
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  45100962 taaataagaataagaaataaaatatggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 45101048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1958117 - 1958203
Alignment:
Q  1 taaataagaataagaaataaaagatggt-ggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  1958117 taaataagaataagaaataaaaggtggtgggggtagggtgttgaataaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 1958203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 8609947 - 8610006
Alignment:
Q  29 ggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  8609947 ggggtaaagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 8610006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15053766 - 15053680
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||| | |||||| ||||||| |||||||||    
T  15053766 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagtg-gtaaaaattgaatgggtgttgaat 15053680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26244631 - 26244545
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||| | ||||||||| |||||| ||||||| |||||||||    
T  26244631 taaataagaataagaaataaaaggtggtgggatagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgtgtgttgaat 26244545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29731828 - 29731742
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||  ||||| ||||||| |||||||||    
T  29731828 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-ttaaaaattgaatgggtgttgaat 29731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38206951 - 38207037
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||| |||||| ||| ||| |||||||||    
T  38206951 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattgaagag-gtaaaaattggatgtgtgttgaat 38207037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44150004 - 44149918
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| || ||||||    
T  44150004 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtattgaat 44149918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35931995 - 35931910
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||  ||||||||| |||||| ||||| | |||||||||    
T  35931995 taaataagaataagaaataaaatgtggtggggtagggtgttgaatgaaaaactattggagag-gtaaaaattgaaagggtgttgaat 35931910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13947500 - 13947414
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  13947500 taaataagaataagaaataaaatgttgtggggtagtgtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 13947414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23549847 - 23549761
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  23549847 taaataagaatgagaaataaaaagtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 23549761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 26749373 - 26749433
Alignment:
Q  28 tggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||| |||||||||||||| ||||| |||| ||||||||||||||| |||||||||    
T  26749373 tggggtagaatgttgaatgaaaaaccattgaagagggtaaaagttgaatgaatgttgaata 26749433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44503301 - 44503219
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||||| ||||| ||||| ||||||| |||||    
T  44503301 taaataagaataaggaataaaaggtggtggggtagggtgttgaatgaaaaaaccattgaagaga-taaaaattgaatgggtgtt 44503219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 43618291 - 43618372
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||| |||||| |||||||  ||||||||    
T  43618291 aagaataagaaataaaatgtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatggatgttgaat 43618372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1634778 - 1634864
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaa-aatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||| ||||| ||||||||||||| || |||| ||||| ||||||  |||||| |||||||||    
T  1634778 taaataagaataagaaataaaatgtggtgaggtagggtgttgaatgaaagaaccattagagag-gtaaaaactgaatgggtgttgaat 1634864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8176241 - 8176328
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  8176241 taaataagaataagaaataaaaaatggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 8176328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10569748 - 10569835
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10569748 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaata 10569835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34918416 - 34918503
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  34918416 taaataagaataagaaataaaagatggtgggttagattgttgaatgaaaaatcaatggagagggtaaaagttgaatgagtgttgaata 34918503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 34918565 - 34918643
Alignment:
Q  158 ccattttaaatggtctaagaagctagtaactccaaatactattaaaatagaatagtgtagaaatttatagaacatcctttc 238  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34918565 ccattttaaatggtctaagaagcta--aactccaaatactattaaaatagaatagtgtagaaatttatagaacatcctttc 34918643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4577138 - 4577051
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  4577138 taaataagaataaaaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 4577051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41152944 - 41153031
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  41152944 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaatcattgaagaaggtaaaagttgaatgagtgttgaata 41153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14278962 - 14278875
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||| |||||||||||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  14278962 taaatatgaataagaaataaaaggtgatggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgaatgttgaata 14278875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25652946 - 25652859
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||| || |||||||||||||||    
T  25652946 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaaattcaatgagtgttgaata 25652859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27406979 - 27407061
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  27406979 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaatcattggagag-gtaaaagttgaatgagtgtt 27407061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27407682 - 27407769
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  27407682 taaataagaatatgaaataaaaagtggtcgggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 27407769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41263495 - 41263408
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  41263495 taaataagaataagaaataaaaagtggtggggtatagtgttgaatgaaaaaccattggagagggtaaaagttgaatgaatgttgaata 41263408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15972700 - 15972613
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||    
T  15972700 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaattattgaagagggtaaaagttgaatgaatgttgaata 15972613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3454869 - 3454784
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  3454869 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattg--gagagtaaaaattgaatgagtgttgaat 3454784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4938318 - 4938233
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa-tcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  4938318 taaataagattaagaaataaaag--ggtggggtagagtgttgaatgaaaaaatcattggagagggtaaaagttgaattagtgttgaat 4938233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32976514 - 32976599
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  32976514 taaataagaataagaaataaaaggtggtggggtagggtgttgaataaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 32976599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4219382 - 4219468
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  4219382 taaataagaataagaaataaaaggtggtagggtagagtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 4219468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11954910 - 11954823
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||  |||  |||||||||||||| |||||||||    
T  11954910 taaataagaatcagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattgacgaggataaaagttgaatgaatgttgaata 11954823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13479761 - 13479847
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||  |||||| |||||||||||||||||    
T  13479761 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggaga-tgtaaaaattgaatgagtgttgaat 13479847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23089652 - 23089566
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  23089652 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 23089566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 27942625 - 27942539
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  27942625 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 27942539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40889028 - 40888942
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||| |||||||||    
T  40889028 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgggtgttgaat 40888942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 31013786 - 31013867
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  31013786 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 31013867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25032487 - 25032399
Alignment:
Q  1 taaataagaata-agaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| | |||||||| ||||||||||||| |||||||||||||  ||||  |||| |||||||||||||||||||||||||    
T  25032487 taaataagaatataaaaataaaaaatggtggggtagaatgttgaatgaaaacccattaaagagggtaaaagttgaatgagtgttgaata 25032399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 30648047 - 30648136
Alignment:
Q  1 taaataagaataagaaataaaa---gatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||   | |||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  30648047 taaataagaataagaaataaaattaggtggtggggtagagtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 30648136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42607981 - 42608069
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagt-gttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||||||||||  |||||| || ||||||||||||| |||||||||||    
T  42607981 taaataagaatatgaaataaaaggtggtggtgtagagttgttgaatgaaaaactattggaaagggtaaaagttgaataagtgttgaata 42608069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 8681230 - 8681313
Alignment:
Q  5 taagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||| |||||||||  | ||| |||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||    
T  8681230 taagaatatgaaataaaaagttgtgcggtagagtgttgaaagaaaaaccattggagagggtaaaagttgaatgaatgttgaata 8681313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19241450 - 19241364
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  19241450 taaataagaataagaaataaaaggttgtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 19241364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25670843 - 25670929
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaa-atcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| | ||||||||||  ||||| |||||||||||||||||    
T  25670843 taaataagaataagaaataaaaggtggtgggatagggtgttgaatgaaaacaccattggagag-ttaaaaattgaatgagtgttgaat 25670929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 29618951 - 29619037
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  29618951 taaataagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 29619037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36572357 - 36572443
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||| | ||||| ||||||| |||||||||    
T  36572357 taaataagaataagaaataaaaggtggtggggtagagtgttaaatgaaaaaaccattggaga-aataaaaattgaatgggtgttgaat 36572443  T

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Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42318021 - 42317936
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||  ||||||||| |||||| ||||| | |||||||||    
T  42318021 taaataagaataagaaataaaatgtggtggggtagggtgttgaatgaaaaactattggagag-gtaaaaattgaaagggtgttgaat 42317936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 37882372 - 37882456
Alignment:
Q  4 ataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||| |||||||||  |||||||| ||||||||||||||||||  |||||| |  |||||||||||||||| ||||||||    
T  37882372 ataagaatatgaaataaaaagtggtggggaagagtgttgaatgaaaaactattggaaatggtaaaagttgaatgagcgttgaata 37882456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7651137 - 7651051
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||| | |||||| || |||| |||||||||    
T  7651137 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggag-gggtaaaaattaaatgggtgttgaat 7651051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34529320 - 34529407
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||||||| ||| |||||||||||||| ||||||||||  |||||||| ||||| |||| ||||    
T  34529320 taaataagaatatgaaataaaaagtggtggggaagaatgttgaatgaaaaaccattggagaggataaaagttaaatgaatgttaaata 34529407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39238548 - 39238462
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||||| ||||| |||||||  ||||||||    
T  39238548 taaataagaataagaaataaaaggtggtggggtatggtgttgaatgaaaaaattattggagaga-taaaaattgaatggatgttgaat 39238462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12913004 - 12912916
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa-tcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  ||||||||| |  ||||||| |||||| ||||| ||||| |||||||||||||||||||| ||||    
T  12913004 taaataagaatatgaaataaaaagtggtggggtgggatgttgaaagaaaaaatcattagagagggtaaaagttgaatgagtgttaaata 12912916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31008322 - 31008404
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||| ||||| ||||||| || |||||| ||||||| |||||    
T  31008322 taaataagaataagaaataaaaggtggtggggtaggatgttgaatgaaaaaaccattggaaag-gtaaaaattgaatgggtgtt 31008404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32363552 - 32363638
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| |||||| | ||| ||||| |||||| || |||| |||||||||    
T  32363552 taaataagaataagaaataaaaggtggtggtgtagagtgttgaacgaaaaaactattagagag-gtaaaaattaaatgggtgttgaat 32363638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34710010 - 34709925
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||| | || |||||| || |||| |||||||||    
T  34710010 taaataagaataagaaataaagg-tggtggggtagagtgttgaatgaaaaaatcattgaatag-gtaaaaattaaatgggtgttgaat 34709925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39008614 - 39008528
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||| |||| |||||||||  |||||| |||||||  ||||||||    
T  39008614 taaataagaataagaaataaaaggtggtggggtagggcgttgaatgaaaaaaccattggaga-tgtaaaaattgaatggatgttgaat 39008528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42806937 - 42807023
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||| ||||| |||| ||||  |||||| ||||||| |||||||||    
T  42806937 taaataagaataataaataaaaggtggtggggtagggtgttgaatgaaaaaaccattagaga-tgtaaaaattgaatgggtgttgaat 42807023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9274419 - 9274465
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga 47  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  9274419 taaataagaataagaaataaaaagtggtggggtagagtgttgaatga 9274465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23649105 - 23649155
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  23649105 taaataagaataagaaatcaaaggtggtggggtagggtgttgaatgaaaaa 23649155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23809466 - 23809416
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  23809466 taaataagaataagaaatcaaaggtggtggggtagggtgttgaatgaaaaa 23809416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36609442 - 36609347
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg----------aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||| |||||||||  ||||||| ||||||||||||||          ||||||||||| ||||  |||||||||||||||||||||||    
T  36609442 taaataagaatatgaaataaaaagtggtggg-tagagtgttgaatgttttaaaaaaaaaaatcattgaagagtctaaaagttgaatgagtgttgaat 36609347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10089981 - 10089894
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10089981 taaataagaataaaaaataaaaaatggtggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtgttgaata 10089894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39533219 - 39533306
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||| |||||||||    
T  39533219 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattgtagatggtaaaagttgaatgaatgttgaata 39533306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 40596702 - 40596787
Alignment:
Q  3 aataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  40596702 aataagaataaaaaataaaaaatggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaataagtgttgaata 40596787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47750164 - 47750250
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47750164 taaataagaataaaaaataaaaaatggtggg-tagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtgttgaata 47750250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 54356836 - 54356921
Alignment:
Q  3 aataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  54356836 aataagaataagaaataaaaggtggtgaggtagagtgttgaatgaaaaaccattagagagagtaaaagttgaatgtgtgttgaata 54356921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31848712 - 31848799
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  31848712 taaataagaataagagataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaatgttgaatgagtgttgaata 31848799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33526851 - 33526764
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  33526851 taaataagaataagaaataaaaagtggtggggtaaagtgttgaatgaaaaattattggagagggtaaaagttgaatgagtattgaata 33526764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 53347998 - 53348085
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  53347998 taaataagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaatcattggagagggtaaaagttaaatgactgttgaata 53348085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36656692 - 36656608
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttga 85  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  36656692 taaataagaataagaaataaaaagtggtggagtagagtgttgaatgaaaaatcatcggagagtgtaaaagttgaatgagtattga 36656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 55408506 - 55408594
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  55408506 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaactattggagatagtaaaagttgaatgagtgttgaata 55408594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23540363 - 23540449
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  23540363 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaatcattggagag-gtaaaaattgaatgggtgttgaat 23540449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 53184036 - 53184121
Alignment:
Q  3 aataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||| ||||| ||||||||  ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  53184036 aataaaaataaaaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggttaaagttgaatgagtgttgaata 53184121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34199206 - 34199292
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  34199206 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggagag-gtaaaaattgaatgggtgttgaat 34199292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39113693 - 39113780
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||||||| ||||| | |  |||||||||||||||||||||||||    
T  39113693 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaccattgaaaatggtaaaagttgaatgagtgttgaata 39113780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51392363 - 51392276
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||| ||||| |||| |||||||||||| || |||||||||    
T  51392363 taaataagaataagaaataaaaagtggtggggtaaagtgttgaatgaaaaaccattgaagagggtaaaagttgaacgaatgttgaata 51392276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18469305 - 18469390
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||| |||||||  ||||||||    
T  18469305 taaataggaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaccattggagag-gtaaaaattgaatggatgttgaat 18469390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45081348 - 45081435
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg--aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||  ||||| |||||||||| |||||| |||||||||||||||||    
T  45081348 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 45081435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48403836 - 48403923
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg--aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||  |||||||||||||||| |||||| |||||||||||||||||    
T  48403836 taaataagaataagaaataaaaggtggcggggtagggtgttgaatggaaaaaatcattggagag-gtaaaaattgaatgagtgttgaat 48403923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3533244 - 3533330
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  3533244 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 3533330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8991918 - 8991832
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  8991918 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 8991832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12158272 - 12158185
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||||| ||||| | |   ||||||||||||||||||||||||    
T  12158272 taaataagaataaaaaataaaaaatggtgaggtagagtgttgaatgaaaaaccattgaaaaagataaaagttgaatgagtgttgaata 12158185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13094327 - 13094413
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||| ||||| ||||||| |||||||||    
T  13094327 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagaga-taaaaattgaatgggtgttgaat 13094413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19409265 - 19409178
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||   |||||||||||||| | |||||||    
T  19409265 taaataagaataagaaataaaaagtggtggggaagagtgttgaatgaaaaaccattggagatgataaaagttgaatgaatattgaata 19409178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 27863850 - 27863764
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||| |||||||  ||||||||    
T  27863850 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaattattggagag-gtaaaaattgaatggatgttgaat 27863764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28899467 - 28899381
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||||| |||||| ||||||| |||||||||    
T  28899467 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaaccattagagag-gtaaaaattgaatgggtgttgaat 28899381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33523406 - 33523319
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaat-gaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||  |||| |||||||  ||||||||    
T  33523406 taaataagaataagaaataaaaggtggtggggtagagtgttgaataaaaaaatcattggagagataaaaaattgaatggatgttgaat 33523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33604792 - 33604706
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||| |||| |||||||||| |||||| |||||||||||||||||    
T  33604792 taaataagaataagaaataaaaggtggtgggatagagagttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 33604706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 39049029 - 39049108
Alignment:
Q  9 aataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||| |||||||||  ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||||    
T  39049029 aatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaccatcggagagggtaaaagttgaatgaatgttgaata 39049108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40721170 - 40721084
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  40721170 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 40721084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 2215224 - 2215305
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  2215224 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 2215305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3618391 - 3618476
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||| |||||| ||||| | |||||||||    
T  3618391 taaataagaataagaaataaaaggtggtggggtagggtgttgaataaaaaaccattggagag-gtaaaaattgaaagggtgttgaat 3618476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 52017481 - 52017393
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttg--aatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||||||||||||||| ||||||  |||| ||||| |||||||||| |||||| |||||||||||||||||    
T  52017481 taaataagaataagaaataaaagatggtggggtagggtgttgaaaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 52017393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6290735 - 6290649
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  6290735 taaataagaataagaaataaaaggtggtgggatagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 6290649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16020982 - 16020896
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| |||||||  ||||||||    
T  16020982 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatggatgttgaat 16020896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16174952 - 16175038
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| ||||| | |||||||||    
T  16174952 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaaagggtgttgaat 16175038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33077811 - 33077893
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||    
T  33077811 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgtt 33077893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38173690 - 38173604
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||| |||||||||||||    
T  38173690 taaataaaaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattggatgagtgttgaat 38173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48506543 - 48506629
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||| ||||| ||||||||||  ||||| |||||||||||||||||    
T  48506543 taaataagaataaaaaataaaaggtggtggggtagagtgttgcatgaaaaaaccattggagag-ttaaaaattgaatgagtgttgaat 48506629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 52772888 - 52772802
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||| ||||| ||||| | |||||||||    
T  52772888 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagaga-taaaaattgaaagggtgttgaat 52772802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 27142272 - 27142353
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  27142272 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 27142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34463961 - 34464046
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||||||  ||||||||| |||||| ||||| | |||||||||    
T  34463961 taaataagaataagaaataaaaggtggtggggtaggatgttgaatgaaaaactattggagag-gtaaaaattgaaagggtgttgaat 34464046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 46917453 - 46917534
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  46917453 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 46917534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 56054151 - 56054089
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagag 62  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||    
T  56054151 taaataagaataagaattaaaaggtggtggggtagagtgttgaatgaaaaaatcattggagag 56054089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13110696 - 13110610
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||||| ||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  13110696 taaataagaataagaaataaaatgtggtgggttagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 13110610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19272918 - 19272832
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||| | |||||||||| ||||| |||||||  ||||||||    
T  19272918 taaataagaataagaaataaaaggtggtggggtaggatgttgaatgaaaaaactattggagaga-taaaaattgaatggatgttgaat 19272832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35809298 - 35809212
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| || ||| |||| ||||||||||||||| | ||||||||| |||||| ||||||| |||||||||    
T  35809298 taaataagaataagaaataaaaggtgatggagtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgggtgttgaat 35809212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 55560416 - 55560502
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||  |||||||||    
T  55560416 taaataagaataagaaataaaatgtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaataggtgttgaat 55560502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34564258 - 34564171
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  || ||| ||| | |||||||| ||||| ||||| |||| ||||||||| ||||| |||||||||    
T  34564258 taaataagaataagaaataaaaagtgatggagtaaaatgttgaataaaaaaccattgaagagggtaaaagttaaatgaatgttgaata 34564171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23389865 - 23389952
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg--aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||| ||||||||||  |||||||| ||||||||||||  ||||| |||||||||| |||| | |||||||||| ||||||    
T  23389865 taaataagaataggaaataaaaggaggtggggttgagtgttgaatgaaaaaaaccattggagag-gtaacaattgaatgagtattgaat 23389952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 55854 - 55910
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattg 57  Q
    ||||||||||||||||||||||  |||| | |||||||||||||||||||| |||||    
T  55854 taaataagaataagaaataaaaagtggttgagtagagtgttgaatgaaaaaccattg 55910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17329849 - 17329899
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||| ||||||||| ||||||| ||| |||||||||||||||    
T  17329849 taaataagaataacaaataaaaggtggtgggttagggtgttgaatgaaaaa 17329899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 4981634 - 4981558
Alignment:
Q  11 taagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| || |||  |||||||||    
T  4981634 taagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattaaataggtgttgaat 4981558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 39418284 - 39418332
Alignment:
Q  28 tggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaat 76  Q
    |||| |||||||||||||||||||  |||| ||||||||||| ||||||    
T  39418284 tgggatagagtgttgaatgaaaaactattgaagagagtaaaaattgaat 39418332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50033802 - 50033715
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50033802 taaataagaataagaaataaaaagtggtggggtatagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 50033715  T

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Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42601443 - 42601530
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  42601443 taaataagaataaaaaataaaaaatggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 42601530  T

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Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 15493761 - 15493847
Alignment:
Q  2 aaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  15493761 aaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaatcattggagatggtaaaagttgaatgaatgttgaata 15493847  T

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Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20139497 - 20139410
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||  ||||||||||||||||||||||||    
T  20139497 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaaaccattggagaaggtaaaagttgaatgagtgttgaat 20139410  T

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Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33795433 - 33795520
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  33795433 taaataagaataagaaataaaaaatggtgcggtagagtgttgaatgaaaaactattgaagagagtaaaagttgaatgagtgttgaata 33795520  T

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Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37410357 - 37410444
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  37410357 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgaatgttgaata 37410444  T

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Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41890669 - 41890582
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  41890669 taaataagaataaaaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 41890582  T

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Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49357435 - 49357522
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  49357435 taaataagaataagaaataaaaagtggtggggtagagtattgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 49357522  T

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Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42601896 - 42601809
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||    
T  42601896 taaataagaataagaaataaaaagtggtagggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaata 42601809  T

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Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51427235 - 51427148
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||  |||||||||||||||||||||||||    
T  51427235 taaataagaataagaaataaaaagtggtggggtaaagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaata 51427148  T

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Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28410530 - 28410442
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  28410530 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaatcattggagatggtaaaagttgaatgagtgttgaata 28410442  T

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Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35853129 - 35853217
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  35853129 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaaccattggagatagtaaaagttgaatgagtgttgaata 35853217  T

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Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49710326 - 49710414
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  49710326 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaaccattggagatagtaaaagttgaatgagtgttgaata 49710414  T

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Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25450572 - 25450659
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||  |||||||||||||| |||||||||    
T  25450572 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaactattggagaggataaaagttgaatgaatgttgaata 25450659  T

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Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 25832666 - 25832749
Alignment:
Q  5 taagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  25832666 taagaataaaaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagggggtaaaagttgaatgagtgttgaata 25832749  T

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Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 46572863 - 46572950
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||    
T  46572863 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaactattggagagggtaaaagttgaatgagtcttgaata 46572950  T

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Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 49823116 - 49823195
Alignment:
Q  9 aataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||    
T  49823116 aataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaata 49823195  T

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Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 139101 - 139025
Alignment:
Q  12 aagaaataaaagatggtggggtagagtgttgaatgaaaaa-tcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  139101 aagaaataaaaggtggtggggtagagtgttgaattaaaaaatcattggagagggtaaaagttgaatgagtgttgaat 139025  T

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Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43022784 - 43022696
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||    
T  43022784 taaataagaatatgaaataaaaattggtggggtagagtgttgaatgaaaaaaccattgaagatagtaaaagttgaatgagtgttgaata 43022696  T

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Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33935125 - 33935039
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||    
T  33935125 taaataagaataaaaaataaaaagtggtggggtagagtgttgaatg-aaaaccattggagagggtaaaagttgattgagtgttgaata 33935039  T

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Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35423947 - 35424034
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||||||||| |||  |||||||||| |||||||||||||||| |||| ||||| |||||||| ||||||||||||||||    
T  35423947 taaataagaataagaaatcaaaagtggtggggtaaagtgttgaatgaaaaaccatttgagagggtaaaagtcgaatgagtgttgaata 35424034  T

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Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47701000 - 47701087
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||||||||||||||||||| |||||| |  ||||||||||||||||| |||||||||||||||    
T  47701000 taaataagaatatgaaataaaaagtggtggggtagagtgttgaaagaaaaaaccatggagagagtaaaagtttaatgagtgttgaata 47701087  T

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Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49147226 - 49147313
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||| | ||||||||||||||||||||| | |  |||||||||||||||||||||||||    
T  49147226 taaataagaataagaaataaaaagtggtggggttgggtgttgaatgaaaaatcattgaaaaaggtaaaagttgaatgagtgttgaata 49147313  T

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Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49407275 - 49407362
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||| |||  ||||||||||||||||| |||||||    
T  49407275 taaataagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaaccattgaagaaggtaaaagttgaatgagtattgaata 49407362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 53722526 - 53722452
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaat 76  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  53722526 taaataagaataataaataaaagatagtggggta-agtgttgaatgaaaaaccattggagagagtaaaagttgaat 53722452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 55026875 - 55026789
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||| |||||| |||||||||||||||||    
T  55026875 taaataagaataagaaataaaaggtggtggggtagaatgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 55026789  T

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Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 30418367 - 30418452
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  30418367 taaataagaataagaaataaaaggtggtggggtagggtgttgaataaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 30418452  T

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Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30862734 - 30862822
Alignment:
Q  1 taaataagaataagaaataaaaga-tggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||| |||||||||||  |||||| ||||||||||||||||||||||||||||||| |||||  || |||||||||||||||    
T  30862734 taaataagaatgagaaataaaagggtggtggagtagagtgttgaatgaaaaatcattggagagggtaaatattaaatgagtgttgaata 30862822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50017182 - 50017101
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||      || |||||||||||||||||||||||||    
T  50017182 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaatca------agggtaaaagttgaatgagtgttgaata 50017101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6048633 - 6048719
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  6048633 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 6048719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26550073 - 26550147
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaat 76  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||||| |||||||||||||    
T  26550073 taaataagaataagaaataaaaggtggtggagtagagtgttgaatg-aaaaccattggagagggtaaaagttgaat 26550147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33748822 - 33748736
Alignment:
Q  1 taaataagaataagaaa--taaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttga 85  Q
    ||||||||||||| |||  ||||| |||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  33748822 taaataagaataaaaaaaataaaaaatggtgggatagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttga 33748736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 50415767 - 50415853
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  50415767 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 50415853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 51304474 - 51304388
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||| |||||| ||||||| |||||||||    
T  51304474 taaataagaataagaaataaaaggtggtagggtagagtgttgaatgaaaaaactattggagag-gtaaaaattgaatgggtgttgaat 51304388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10426368 - 10426444
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatg 77  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||    
T  10426368 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggagag-gtaaaaattgaatg 10426444  T

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Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 48886923 - 48886999
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatg 77  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||| |||||||    
T  48886923 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaaccattggagag-gtaaaaattgaatg 48886999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6832521 - 6832434
Alignment:
Q  1 taaataagaataagaaa-taaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  6832521 taaataagaataagaaaataaaaggtggtggggtagaatgttgaatgaaaaaaccattggagaga-taaaaattgaatgagtgttgaat 6832434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11908155 - 11908069
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||| |||| |||||| ||||||| |||||||||    
T  11908155 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattgaagag-gtaaaaattgaatgggtgttgaat 11908069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12974805 - 12974718
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||   ||||  |||||| |||||||||    
T  12974805 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaaccattggagaggtaaaaaaatgaatgggtgttgaat 12974718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 25790720 - 25790798
Alignment:
Q  9 aataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  25790720 aataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 25790798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26165491 - 26165577
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  26165491 taaataagaataagaaataaaaggtggtggggtagggttttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 26165577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32120375 - 32120461
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||| |||||| ||||| | |||||||||    
T  32120375 taaataagaataagaaataaaatatggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaaagggtgttgaat 32120461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41183410 - 41183324
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||| ||| |||||||||    
T  41183410 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgtatgggtgttgaat 41183324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42258463 - 42258376
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||| | ||||||| || ||||||||||||||||||||||||| | |||| |||| ||||||||||||||| ||||||||    
T  42258463 taaataagaatatggaataaaaaatagtggggtagagtgttgaatgaaaaaactattgaagagggtaaaagttgaatgaatgttgaat 42258376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 5845082 - 5845163
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||  |||||| |||||||||||||||||    
T  5845082 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggaga-tgtaaaaattgaatgagtgttgaat 5845163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 17466646 - 17466565
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  17466646 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 17466565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 47144304 - 47144223
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| |||||| ||||||||||    
T  47144304 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaataagtgttgaat 47144223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51999173 - 51999260
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa--tcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||  |  ||||||||| ||||| ||||||| |||||||||    
T  51999173 taaataagaataagaaataaaatatggtggggtagggtgttgaatgaaaaaactatttggagaga-taaaaattgaatgggtgttgaat 51999260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4046116 - 4046030
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| || || | |||||||||    
T  4046116 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaagctattggagag-gtaaaaattaaaagggtgttgaat 4046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 27847545 - 27847459
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||| |||| |||||| || |||| |||||||||    
T  27847545 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattgaagag-gtaaaaattaaatgggtgttgaat 27847459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29701818 - 29701732
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||| |||| |||||||| | |||||| ||||||| |||||||||    
T  29701818 taaataagaataagaaataaaaggtggtggagtagggtgttgaatgaaaaaaccattggag-gggtaaaaattgaatgggtgttgaat 29701732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36178641 - 36178727
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||||  |||||||||| |||||||||| ||||| |||||||||| |||||| |||||||  ||||||||    
T  36178641 taaataagaataagaaataaaaggaggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatggatgttgaat 36178727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42561037 - 42560951
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||  ||||| ||||| | |||||||||    
T  42561037 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-ttaaaaattgaaagggtgttgaat 42560951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44084444 - 44084359
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||| |||||| ||||| | |||||||||    
T  44084444 taaataagaataagaaataaaatatggtggggtag-gtgttgaatgaaaaaactattggagag-gtaaaaattgaaagggtgttgaat 44084359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 50176024 - 50176098
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaat 76  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||||| ||| | ||| ||||||||||||||    
T  50176024 taaataagaataagaaataaaaggtggtggggtaga-tattgaatgaaaaaccatcgaagaaagtaaaagttgaat 50176098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35472577 - 35472627
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  35472577 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaa 35472627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7008149 - 7008105
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaat 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  7008149 taaataagaataagaaataaaaggtggtggggtagagtgttgaat 7008105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28155163 - 28155251
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggaga-gagtaaaagttgaatgagtgttgaat 87  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| || ||||| ||||||||| |   |||| |||||||||||||||||    
T  28155163 taaataaaaataagaaataaaaggtggtggggtagagtgttgactgaaaaaaccattggagaggcaaaaaaattgaatgagtgttgaat 28155251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50734152 - 50734077
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaat 76  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||| |||| |||||||||| |||||| ||||||    
T  50734152 taaataagaataagaaataaaatatggtggggtaggatgttgaatgaaaaaaccattggagag-gtaaaaattgaat 50734077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 50778703 - 50778778
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaat 76  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||| ||||| |||||||||| |||||| ||||||    
T  50778703 taaataagaataagaaataaaatatggtggggtaggatgttgaatgaaaaaaccattggagag-gtaaaaattgaat 50778778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43474021 - 43473970
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaat 52  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  43474021 taaataagaataagaaataaaaggtggtgggggagaatgttgaatgaaaaat 43473970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 44995345 - 44995266
Alignment:
Q  9 aataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||  |||||| ||| |||||||||||||||| |||||  ||| ||||||||||||||| |||| ||||    
T  44995345 aataagaaataaaaagtggtggagtaaagtgttgaatgaaaaaccattgctgagggtaaaagttgaatgaatgttaaata 44995266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 51973600 - 51973545
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcatt 56  Q
    |||||||||||| |||||||||  |||||| |||||||||||||| ||||||||||    
T  51973600 taaataagaatatgaaataaaaagtggtggagtagagtgttgaataaaaaatcatt 51973545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 38572105 - 38572166
Alignment:
Q  15 aaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaat 76  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||| ||||||    
T  38572105 aaataaaaggtggtggggtagagtgttgaatgaaaaaaccattggagag-gtaaaaattgaat 38572166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46137101 - 46137151
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||||| | || |||||||||||| |||||||||    
T  46137101 taaataagaataagaaataaaaggtagttgggtagagtgttaaatgaaaaa 46137151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7521075 - 7521162
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  ||||||||| || |||||||||| ||| ||||  |||  |||   |||||||||||||||||||    
T  7521075 taaataagaatatgaaataaaacgtggtggggttgattgttgaatgataaaccattaaagaatgtatttgttgaatgagtgttgaata 7521162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 21225317 - 21225274
Alignment:
Q  2 aaataagaataagaaataaaagatggtggggtagagtgttgaat 45  Q
    ||||||||||| |||||||||  |||||||||||||||||||||    
T  21225317 aaataagaatatgaaataaaaagtggtggggtagagtgttgaat 21225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 30692357 - 30692434
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagt 80  Q
    ||||||| ||||||||||||||  |||||| |||| ||||| ||||||||| |||| ||||| || ||||||||||||||    
T  30692357 taaataaaaataagaaataaaaagtggtggtgtagggtgtt-aatgaaaaaccattagagagggt-aaagttgaatgagt 30692434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 52000000 - 52000085
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| || || ||||| |||||||||| ||||| |||||||||  |||||| |||||| | ||||||||    
T  52000000 taaataagaataagaaataaaaggtgatgaggtag-gtgttgaatgaaaaaaccattggaga-tgtaaaaattgaataaatgttgaat 52000085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37183002 - 37183074
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaa 75  Q
    |||||||||||||  |||||||| ||||||||||| ||||| |||| ||||| |||||||||| |||||| |||||    
T  37183002 taaataagaataa--aataaaaggtggtggggtagggtgttaaatgaaaaaaccattggagag-gtaaaaattgaa 37183074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45351998 - 45351958
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgtt 41  Q
    |||||||||||| |||||||||| |||||| ||||||||||    
T  45351998 taaataagaatatgaaataaaaggtggtggagtagagtgtt 45351958  T

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Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17783508 - 17783421
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17783508 taaataagaataaaaaataaaaaatggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaata 17783421  T

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Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44451208 - 44451295
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  44451208 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 44451295  T

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Target: chr1; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44651204 - 44651117
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  44651204 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 44651117  T

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Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 52933706 - 52933793
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  52933706 taaataagaataaaaaataaaaaatgatggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaatgagtgttgaata 52933793  T

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Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 52941341 - 52941428
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  52941341 taaataagaataaaaaataaaaaatgatggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaatgagtgttgaata 52941428  T

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Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 44929236 - 44929315
Alignment:
Q  9 aataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  44929236 aataaaaaataaaaaatggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 44929315  T

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Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45456088 - 45456174
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaat-cattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  45456088 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaatccattggagag-gtaaaaattgaatgagtgttgaat 45456174  T

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Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 643760 - 643847
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||||    
T  643760 taaataagaataagagataaaaagtggtggggtagagtgttgaatgaaaaaccatttgagagggtaaatgttgaatgagtgttgaata 643847  T

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Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8464230 - 8464143
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||| |||||||| ||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8464230 taaacaagaataaaaaatagaaagtggtggggtagagtgttgaatgaaaaaccattggagagagtaaaaattgaatgagtgttgaata 8464143  T

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Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20584789 - 20584876
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||||    
T  20584789 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaatctttggagaagataaaagttgaataagtgttaaata 20584876  T

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Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37822702 - 37822616
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||    
T  37822702 taaataagaataagaaataaaaggtggtggggtagagtgttgaaagaaaaaatcattggagag-gtaaaaattgaatgagtgttgaat 37822616  T

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Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41542459 - 41542380
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagt 80  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  41542459 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagaggataaaagttgaatgagt 41542380  T

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Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44334420 - 44334333
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||  ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44334420 taaataagaataagaaataaaaagtggcagggtaaagtgatgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaata 44334333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 48404462 - 48404376
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  48404462 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggagag-gtaaaaattgaatgagtgttgaat 48404376  T

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Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45239270 - 45239183
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||||||||||||||    
T  45239270 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaata 45239183  T

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Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33164544 - 33164458
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||  |||||| |||||||||||||||||    
T  33164544 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggaga-tgtaaaaattgaatgagtgttgaat 33164458  T

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Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8468456 - 8468370
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaa-atcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||||| ||||||||| |||| |||||||||    
T  8468456 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaatatcatcagagag-gtaaaagttaaatgtgtgttgaat 8468370  T

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Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23092901 - 23092815
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||  |||||| |||||||||    
T  23092901 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggagag-gtaaaaactgaatgggtgttgaat 23092815  T

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Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31159519 - 31159433
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  31159519 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 31159433  T

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Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36230489 - 36230403
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  36230489 taaataagaataagaaataaaaggtgatggggtagagtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 36230403  T

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Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36303113 - 36303026
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||| |||| ||||||||||||||||| |||||||||| |||||||||||||  ||||||||||    
T  36303113 taaataagaatatgaaataaaaagtggtagggtggagtgttgaatgaaaaaccattggagagggtaaaagttgaatatgtgttgaata 36303026  T

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Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40500530 - 40500443
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||||||||| |||  ||||||| || |||||||||||||||| || ||||||| ||||||||| |||||||||||||||    
T  40500530 taaataagaataagaaatgaaaagtggtgggataaagtgttgaatgaaaaaccactggagagggtaaaagttaaatgagtgttgaata 40500443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48388045 - 48388131
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  48388045 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 48388131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48729453 - 48729366
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||| |||  ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  48729453 taaataagaatatgaaataaaaagtggtagggaggagtgttgaatgaaaaaccattggagagggtaaaagttgaatgtgtgttgaata 48729366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2478266 - 2478351
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||| |||||| ||||| | |||||||||    
T  2478266 taaataagaataagaaataaaaggtggtggggtagggtgttgaataaaaaaccattggagag-gtaaaaattgaaagggtgttgaat 2478351  T

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Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 37646502 - 37646583
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  37646502 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggagag-gtaaaaattgaatgggtgttgaat 37646583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 47300440 - 47300520
Alignment:
Q  7 agaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||| ||||||| |||||||||    
T  47300440 agaataagaaataaaagatggtggagtagagtgttgaatgaaaaaatcattgga-aaagtaaaaattgaatgtgtgttgaat 47300520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 14096823 - 14096737
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||||| ||| ||||||||||| ||||| ||||||||| |||||| |||||||||||||||||    
T  14096823 taaataagaataagaaataaaatgtggtgggatagggtgttgaatgaaaaaattattggagag-gtaaaaattgaatgagtgttgaat 14096737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29919503 - 29919416
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||   |||| ||||||  |||||||||    
T  29919503 taaataagaataagaaataaaatatggtggggtagagtgttgaatgaaaaaaccattggagaggtaaaaaattgaataggtgttgaat 29919416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51494409 - 51494495
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||| |||||| |||||||| ||||||||    
T  51494409 taaataagaataagaaataaaatgtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgaatgttgaat 51494495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17681198 - 17681248
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17681198 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaa 17681248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 31468260 - 31468179
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| |||||||| ||||||||    
T  31468260 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgaatgttgaat 31468179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 37420286 - 37420367
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||  |||||| |||||||||||||||||    
T  37420286 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggaga-tgtaaaaattgaatgagtgttgaat 37420367  T

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Target: chr1; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 19578846 - 19578933
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc--attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||| |  ||||||||| |||||| ||||||| |||||||||    
T  19578846 taaataagaataagaaataaaaggtggtagggtagggtgttgaatgaaaaaaccaattggagag-gtaaaaattgaatgggtgttgaat 19578933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29523835 - 29523749
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||  |||||| |||||||  ||||||||    
T  29523835 taaataagaataagaaataaaaggttgtggggtagggtgttgaatgaaaaaatcattggaga-tgtaaaaattgaatggatgttgaat 29523749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 27630402 - 27630483
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||  ||||||||||| |||||||||| ||||| |||||||||  |||||| |||||||||||||||||    
T  27630402 aagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaaaccattggaga-tgtaaaaattgaatgagtgttgaat 27630483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30878480 - 30878530
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  30878480 taaataagaataagaaataaaaggtggtggggtagagcgttgaatgaaaaa 30878530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45362839 - 45362789
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  45362839 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaa 45362789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37691227 - 37691313
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  |||||| |||| |||||||||| ||||| |||||||||| |||||| |||||||  ||||||||    
T  37691227 taaataagaataagaaataaaatgtggtggagtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatggatgttgaat 37691313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45623467 - 45623553
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  ||||||| ||| |||||||||| ||||| ||| ||||||| ||||| || ||||||||||||||    
T  45623467 taaataagaataagaaataaaatgtggtgggatagggtgttgaatgaaaaaaccataggagaga-taaaaattaaatgagtgttgaat 45623553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 51156827 - 51156906
Alignment:
Q  3 aataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    |||| |||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||    
T  51156827 aatatgaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaa-ttgaatgggtgtt 51156906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3754961 - 3755053
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-----aaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||| |||| |||||||||  ||||||||||||||||||||||     |||||  ||||||||| ||||||||||| ||| |||||||||    
T  3754961 taaataaaaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaaaaaactattggagagggtaaaagttgattgaatgttgaata 3755053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10266897 - 10266947
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||| ||||||||  |||||| ||||||||||||||||||||    
T  10266897 taaataagaataataaataaaatgtggtggagtagagtgttgaatgaaaaa 10266947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 51520351 - 51520267
Alignment:
Q  1 taaataagaataagaaa-taaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgtt 83  Q
    ||||||||||||| ||| |||||| ||||| | || |||| ||||||||||| | ||||||||| ||||||||||||| ||||||    
T  51520351 taaataagaataaaaaaataaaaggtggtgtgatacagtgctgaatgaaaaaaccattggagagggtaaaagttgaataagtgtt 51520267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43739112 - 43739026
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||| ||||||||||| || ||| |||||||||| |||| ||||| ||||  |||| |||||| |||||| ||||||||||    
T  43739112 taaataagaatgagaaataaaaggtgatggagtagagtgttaaatgaaaaaaccatttaagag-gtaaaaattgaataagtgttgaat 43739026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39149203 - 39149153
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    |||||||| ||| |||||||||  |||| ||||||||||||||||||||||    
T  39149203 taaataagtatatgaaataaaaagtggtagggtagagtgttgaatgaaaaa 39149153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30476 - 30563
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  30476 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaataagtgttgaata 30563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30630752 - 30630839
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  30630752 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtattgaata 30630839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26013137 - 26013222
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaa 86  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26013137 taaataagaataagaaataaaaagtggtggggtaaagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtattgaa 26013222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21654980 - 21654893
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  21654980 taaataagaataaaaaataaaaaatggtggggtagagtgttgaatgaaaaaccattggagagggtaaatgttgaatgagtgttgaata 21654893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24793625 - 24793538
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  24793625 taaataagaataagaaatagaaagtggtggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaatgagtgttgaata 24793538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38970167 - 38970080
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  38970167 taaataagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaatcattggagacggtaaaagttgaatgagtgttgaata 38970080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22191353 - 22191267
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  22191353 taaataagaataagaaataaaaagtggtggggtagagtgttgaatg-aaaaccattggagagggtaaaagttgaatgagtgttgaata 22191267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22737533 - 22737620
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||    
T  22737533 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgaatgttgaata 22737620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25218746 - 25218833
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||    
T  25218746 taaataagaataaaaaataaaaaatggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttaaatgagtattgaata 25218833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43571031 - 43571119
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| |||||||||  |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  43571031 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatgaaaaaaccattggagatagtaaaagttgaatgagtgttgaata 43571119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48985041 - 48984954
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  48985041 taaataagaataagagataaaaagtggtggggtagagtgttgaatgaaaaaccattggagatggtaaatgttgaatgagtgttgaata 48984954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36518649 - 36518564
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  36518649 taaataagaataagaaataaaaggtggtggggtagggtgttgaataaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 36518564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33078722 - 33078808
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||| |||||| |||||||| ||||||||    
T  33078722 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaactattggagag-gtaaaaattgaatgaatgttgaat 33078808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35193057 - 35193144
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||  || ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||    
T  35193057 taaataagaataagaaataaaaagtggatggatagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaata 35193144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39769864 - 39769778
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| ||||| |||||| |||||||||||||||||    
T  39769864 taaataagaataagaaataaaagatggtggggtagggtgttgaatgaaaaaaccattagagag-gtaaaaattgaatgagtgttgaat 39769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 114624 - 114537
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||| ||| |||||||||||| |||||||||   |||||||| |||||||||||||||    
T  114624 taaataagaataagaaataaaaagtggtggggtaaagtattgaatgaaaaaccattggagatgataaaagttaaatgagtgttgaata 114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25038531 - 25038618
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||| |||| | |||||||||||||| |||||||||| |||||| |||||||||||| |||||    
T  25038531 taaataagaataagaaataaaaagtggtgaggtaaaatgttgaatgaaaaaccattggagagggtaaaacttgaatgagtgtcgaata 25038618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30566735 - 30566649
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||||    
T  30566735 taaataagaataaaaaataaaaggtggcggggtagagtgttgaatgaaaaaactattggagaga-taaaaattgaatgagtgttgaat 30566649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32748932 - 32748850
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||  |||||| |||||||||||||    
T  32748932 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggaga-tgtaaaaattgaatgagtgtt 32748850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40302428 - 40302514
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  40302428 taaataagaataagaaataaaaggtggtggggtaaggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 40302514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42881493 - 42881407
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||  |||||||||    
T  42881493 taaataagaataagaaataaaagatggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaattggtgttgaat 42881407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43202074 - 43202149
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaat 76  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||| ||||| |||||||||| |||||||||||||    
T  43202074 taaataagaataagaaataaaaggtggtggagtagaatgttgaataaaaaaccattggagagggtaaaagttgaat 43202149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45549556 - 45549642
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||| |||||||||    
T  45549556 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgggtgttgaat 45549642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 35029051 - 35029132
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  35029051 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 35029132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30720255 - 30720169
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||| |||| |||||| ||||||| |||||||||    
T  30720255 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattgaagag-gtaaaaattgaatgggtgttgaat 30720169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 5813228 - 5813147
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| |||||| ||||||||||    
T  5813228 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaataagtgttgaat 5813147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 47159437 - 47159518
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  47159437 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 47159518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 20354356 - 20354272
Alignment:
Q  3 aataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  20354356 aataagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 20354272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26812249 - 26812162
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga--aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||  |||| |||||||||| |||||| |||||||||| ||||||    
T  26812249 taaataagaataagaaataaaaggtggtggggtaggatgttgaatgaaaaaaaccattggagag-gtaaaatttgaatgagtattgaat 26812162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33508462 - 33508549
Alignment:
Q  1 taaataagaataagaaataaaagatggt-ggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||  |||| ||||||||||||| |||| |||||| ||||||||| |||||| |||||||||||||||||    
T  33508462 taaataagaataagaaataaaaagtggtgggggtagagtgttaaatgaaaaaattattggagag-gtaaaaattgaatgagtgttgaat 33508549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37951884 - 37951798
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  37951884 taaataagaataagaaataaaaggtggtgggataaggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 37951798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1940609 - 1940695
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||| |||||||||  |||||||||| ||||||| |||||||   |||| |||| ||||||||||||| ||||||||||    
T  1940609 taaataagaatatgaaataaaaagtggtggggtaaagtgttgtatgaaaatctattgaagagggtaaaagttgaataagtgttgaat 1940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28317981 - 28318031
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  28317981 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaa 28318031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 37887980 - 37887932
Alignment:
Q  3 aataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37887980 aataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaa 37887932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32130207 - 32130284
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg--aaaaatcattggagagagtaaaagttgaatg 77  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||  ||||| |||||||||| |||||| |||||||    
T  32130207 taaataagaataagaaataaaaggtggtggggtaggatgttgaatgaaaaaaaccattggagag-gtaaaaattgaatg 32130284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22656802 - 22656752
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||    
T  22656802 taaataagaataagaaataaaaggtggtggagtagagtgttgaataaaaaa 22656752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2414690 - 2414735
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg 46  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||    
T  2414690 taaataagaatatgaaataaaaagtggtggggtagagtgttgaatg 2414735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36855712 - 36855799
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  36855712 taaataagaataaaaaataaaaaatggtggggtagagtgttgaattaaaaatcattggagagggtaaaagttgaatgagtgttgaata 36855799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37245636 - 37245549
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  37245636 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 37245549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 927830 - 927917
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||    
T  927830 taaataagaataagaaataaaaagtggtggggtagagtgttgaatgaaaaaccattagagagtgtaaaagttgaatgagtgttgaata 927917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9074163 - 9074250
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  9074163 taaataagaataaaaaataaaaaatgatggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaata 9074250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39490278 - 39490193
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  39490278 taaataagaataagaaataaaaggtggtgaggtagagtgttgaatgaaaaatcattggagaga-taaaaattgaatgagtgttgaat 39490193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1073021 - 1073107
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  1073021 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 1073107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5146649 - 5146736
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  5146649 taaataagaataagaaataaaaagtggtggggtagggtgttgaatgaaaaatcattgcagagggtaaaagttaaatgagtgttgaata 5146736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6333327 - 6333402
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaat 76  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  6333327 taaataagaataagaaataaaagatggtagggtagagtgttgaatgaaaaatcattggagaggataaaagttgaat 6333402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13151421 - 13151508
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  13151421 taaataagattaagaaataaaaggtggtggggtagagtgttgaatgaaaaaaccattggagagggtaaaagttgaatgagtgttgaat 13151508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31192922 - 31193009
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  31192922 taaataagaataagaaatacaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtattgaata 31193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38901855 - 38901768
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  38901855 taaataagaataagaaataaaaagtggtggggtaaagtgttgaatgaaaaaccattggagagggtaaaagttgaacgagtgttgaata 38901768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39433950 - 39434037
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  39433950 taaataagaataagaaataaaaagtggtgggatagagtgttgaatgaaaaatcattggagaggataaaagttgaatgagtgtttaata 39434037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 1987231 - 1987167
Alignment:
Q  24 atggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1987231 atggtggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtgttgaata 1987167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6363090 - 6363003
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||| | |||| |||| ||||||||||||||||||||||||    
T  6363090 taaataagaataagaaataaaaggtggtggggtaaagtgttgaatgaaaaaacaattgtagagggtaaaagttgaatgagtgttgaat 6363003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31174124 - 31174211
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||||||    
T  31174124 taaataagaataagaaataaaaagtggcggggtagagtgttgaatgaaaaaccattggggatggtaaaagttgaatgagtgttgaata 31174211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36209413 - 36209498
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| ||||||| ||||| |||||||||||||||||    
T  36209413 taaataagaataagaaataaaaggtggtggggtagagtgttgaatggaaaaccataggagaga-taaaaattgaatgagtgttgaat 36209498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9117948 - 9117862
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||| |||||| |||||||||||||||||    
T  9117948 taaataagaataagaaataaaaggtggtggggtagaatgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 9117862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 43495679 - 43495741
Alignment:
Q  25 tggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  43495679 tggtggggtagagtgttgaatgaaaaatcattggagaggataaaagttgaatgagtgttgaat 43495741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7588440 - 7588526
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  7588440 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 7588526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22351552 - 22351638
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  22351552 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 22351638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43021877 - 43021791
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaa-aatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||||| |||||| ||||||| |||||||||    
T  43021877 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaagaaccattggagag-gtaaaaattgaatgggtgttgaat 43021791  T

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Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 4296714 - 4296795
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  4296714 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 4296795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 24997211 - 24997130
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| |||||||||||||||||    
T  24997211 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgagtgttgaat 24997130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 12855147 - 12855069
Alignment:
Q  9 aataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| |||||||||||||||||    
T  12855147 aataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 12855069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17929193 - 17929275
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||  |||||| ||||||| |||||    
T  17929193 taaataagaataagaaataaaagatggtgggatagagtgttgaatgaaaaaaccattggaga-tgtaaaaattgaatgggtgtt 17929275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 30822529 - 30822607
Alignment:
Q  9 aataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  30822529 aataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 30822607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44280128 - 44280042
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| ||||| | |||||||||    
T  44280128 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaaagggtgttgaat 44280042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 8852188 - 8852107
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||| ||||| || ||||||||||||||    
T  8852188 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagaga-taaaaattaaatgagtgttgaat 8852107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16218803 - 16218889
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||| |||||||||  | |||||||||||||||||||||||||  | ||||||| ||| || |||||||||||||||||    
T  16218803 taaataagaatatgaaataaaaagttgtggggtagagtgttgaatgaaaaactaatggagagggtacaaattgaatgagtgttgaat 16218889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1308635 - 1308718
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttg 84  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||||| || |||| ||||||    
T  1308635 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggaga-agtaaaaattaaatgtgtgttg 1308718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17485953 - 17485867
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||| ||||   |||||||||| ||||||||| ||||| |||||| |||||||||||||||||    
T  17485953 taaataagaataagaaataaaaggtggtgaggtatgatgttgaatgaaaaaatcattagagag-gtaaaaattgaatgagtgttgaat 17485867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 14152013 - 14152091
Alignment:
Q  10 ataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||| |||||||| ||||||||||||| ||||| ||||| |||  |||||||||||||| |||||||||    
T  14152013 ataagaaataaaaggtggtggggcagagtgttgaatgaaaaaaccattgaagatggtaaaagttgaatgggtgttgaat 14152091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7763427 - 7763511
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||| |||||| ||||||||   ||||| ||||||| |||||||||    
T  7763427 taaataagaataagaaataaaaggtggtggggtaggatgttgaatgaaaaaattattggaga---taaaaattgaatgggtgttgaat 7763511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14383103 - 14383029
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaa 75  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||| |||| |||||||||| |||||| |||||    
T  14383103 taaataagaataagaaataaaatgtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaa 14383029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36526957 - 36526875
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    ||||||||||||| |||||||| |||||||| ||  ||||||||||| ||||||||||||||| |||||| || |||| |||||    
T  36526957 taaataagaataaaaaataaaatatggtgggataaggtgttgaatgaaaaaatcattggagag-gtaaaaattaaatgggtgtt 36526875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2780682 - 2780762
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||||||||||||  |||||||||       |||||||||||| ||| ||||||||||||||| |||  ||||||||||    
T  2780682 taaataagaataagaaataaaaagtggtggggt-------tgaatgaaaaattattagagagagtaaaagttaaataggtgttgaata 2780762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 124147 - 124060
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||    
T  124147 taaataagaataagaaataaaaaatggaggggtagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaata 124060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6380427 - 6380514
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  6380427 taaataagaataaaaaataaaaagtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgtgtgttgaata 6380514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6725562 - 6725650
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||||    
T  6725562 taaataagaatatgaaataaaaaatggtggggtagagtgttgaatgaaaaaaccattgaagatagtaaaagttgaatgagtgttgaata 6725650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12513047 - 12512961
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  12513047 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaatcattggagag-gtaaaaattgaatgggtgttgaat 12512961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30446378 - 30446292
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  30446378 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaatcattggagag-gtaaaaattgaatgggtgttgaat 30446292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8670023 - 8669938
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||| |||||| ||||||| |||||||||    
T  8670023 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 8669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 29428471 - 29428543
Alignment:
Q  16 aataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||    
T  29428471 aataaaaaatggtggggtagagtgttgaatgaaaaaccatttgagagtgtaaaagttgaatgagtgttgaata 29428543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8219079 - 8218993
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||| |||||||||||||| |||||||||    
T  8219079 taaataggaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaaccattggagag-gtaaaagttgaatgggtgttgaat 8218993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12501966 - 12501880
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||| ||||||| |||||||||    
T  12501966 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaatcattagagag-gtaaaaattgaatgggtgttgaat 12501880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34838714 - 34838629
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  34838714 taaataagaataagaaataaaaggtggtggggtagggtgttgaataaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 34838629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34242440 - 34242352
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaatag 89  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| | ||||||| |||||||||||    
T  34242440 taaataaaaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaatcattggagag-gtaagaattgaatgggtgttgaatag 34242352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22627970 - 22627910
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatcattggaga 61  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22627970 taaacaagaataagaaataaaagatggtggggtagagtgctgaatgaaaaatcattggaga 22627910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10884006 - 10883920
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  10884006 taaataagaataagaaataaaaggtggtggggtaggatgttgaatgaaaaaatcattggagag-gtaaaaattgaatgggtgttgaat 10883920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26654273 - 26654359
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||| |||||||||    
T  26654273 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgggtgttgaat 26654359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26760243 - 26760329
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaatc-attggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| |||||| ||||||| |||||||||    
T  26760243 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaactattggagag-gtaaaaattgaatgggtgttgaat 26760329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 631644 - 631566
Alignment:
Q  9 aataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| |||||||||||||||||    
T  631644 aataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgagtgttgaat 631566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24348567 - 24348481
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| |||| |||||| |||||||  ||||||||    
T  24348567 taaataagaataagaaataaaaggtggtggggtagagtgttgaatgaaaaaaccattgaagag-gtaaaaattgaatggatgttgaat 24348481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 197933 - 197852
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||  |||||| ||||||| |||||||||    
T  197933 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaatcattggaga-tgtaaaaattgaatgggtgttgaat 197852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 2503354 - 2503273
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||| |||||| ||||||| |||||||||    
T  2503354 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgaatgggtgttgaat 2503273  T

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Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 34328410 - 34328329
Alignment:
Q  6 aagaataagaaataaaagatggtggggtagagtgttgaatga-aaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||  |||||| |||||||||||||||||    
T  34328410 aagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggaga-tgtaaaaattgaatgagtgttgaat 34328329  T

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Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17961201 - 17961287
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||| |||||| ||| |||  ||||||||    
T  17961201 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaaccattggagag-gtaaaaattgtatgtttgttgaat 17961287  T

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Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24933219 - 24933307
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaa--gttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||| ||||| |||||||||| ||||||   |||||||||||||||||    
T  24933219 taaataagaataagaaataaaaggtggtggggtaggatgttgaatgaaaaaaccattggagag-gtaaaaatattgaatgagtgttgaat 24933307  T

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Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 32359876 - 32359792
Alignment:
Q  5 taagaataagaa-ataaaagatggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaata 88  Q
    |||||||||||| | |||| |||||||||||||  |||||||||||||  ||||||||| |||||| | ||||||||||||||||    
T  32359876 taagaataagaagaaaaaaaatggtggggtagaacgttgaatgaaaaactattggagagggtaaaaatggaatgagtgttgaata 32359792  T

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Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 25834616 - 25834675
Alignment:
Q  24 atggtggggtagagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgtt 83  Q
    |||||||||||||||||| || |||||| |||||||||| ||||||||||||| ||||||    
T  25834616 atggtggggtagagtgttcaacgaaaaaccattggagagggtaaaagttgaattagtgtt 25834675  T

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Target: scaffold0016 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 66009 - 66095
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||| |||| |||||| |||||||||||||||||    
T  66009 taaataagaataagaaataaaaggtggtggggtagggtgttgaatgaaaaaattattgaagag-gtaaaaattgaatgagtgttgaat 66095  T

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Target: scaffold0054 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 57680 - 57766
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||| ||||| ||||| |||| |||||| ||||||| |||||||||    
T  57680 taaataagaataagaaataaaaggttgtggggtagggtgttgaatgaaaaaaccattgaagag-gtaaaaattgaatgggtgttgaat 57766  T

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Target: scaffold0054; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 55194 - 55144
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatgaaaaa 51  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  55194 taaataagaataagaaataaaaggtggtgaggtagggtgttgaatgaaaaa 55144  T

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Target: scaffold0362 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5260 - 5346
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||| ||||| || ||||||| |||||| |||||||  ||||||||    
T  5260 taaataagaataagaaataaaaggtggtagggtagggtgttgaatgaaaaaaccagtggagag-gtaaaaattgaatggatgttgaat 5346  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 170557 - 170650
Alignment:
Q  1 taaataagaataagaaataaaagatggtggggtagagtgttgaatg-------aaaaatcattggagagagtaaaagttgaatgagtgttgaat 87  Q
    ||||||| | || |||||||||  ||||||||||||||||||||||       |||||||||||||||| ||||| ||||||||||||||||||    
T  170557 taaataacactatgaaataaaaagtggtggggtagagtgttgaatgtttttaaaaaaatcattggagagtgtaaaggttgaatgagtgttgaat 170650  T

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