View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2385_low_13 (Length: 322)
Name: NF2385_low_13
Description: NF2385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2385_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 17 - 313
Target Start/End: Original strand, 45595419 - 45595715
Alignment:
| Q |
17 |
gtttctcacaacaaggtgctttacccatttttcactttcaccaactcattaccacaataaataacaataatgacacacaactttgtctttttcttagtgt |
116 |
Q |
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| T |
45595419 |
gtttctcacaacaaggtgctttacccatttttcactttcaccaactcattaccacaataaataacaataatgacacacaactttgtctttttcttagtgt |
45595518 |
T |
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| Q |
117 |
ttttaatagctgaaaacaaattcagagtccattattcatcataagggtaagagagaagataagaaagagtgctgtggaagtaaaccgacttaaatataag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45595519 |
ttttaatagctgaaaacaaattcagagtccattattcatcataagggtaagagagaagataagaaagagtgctgtggaagtaaaccgacttaaatataag |
45595618 |
T |
|
| Q |
217 |
tgtcataaatgcatgaggataattattaacattgaaaagcatataaatatgtaatggaatttaataatggtatgaaaggtgaaaatgaaagaataat |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45595619 |
tgtcataaatgcatgaggataattattaacattgaaaagcatataaatatgtaatggaatttaataatggtatgaaaggtgaaaatgaaagaataat |
45595715 |
T |
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