View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2389_high_10 (Length: 398)
Name: NF2389_high_10
Description: NF2389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2389_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 18 - 393
Target Start/End: Original strand, 12794894 - 12795270
Alignment:
| Q |
18 |
cattcgactctcatacccccaaacactacactaccattgaagaagttcactctagaggataacaaatggaaattcaattgctacaaaaacactatcactt |
117 |
Q |
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| T |
12794894 |
cattcgactctcatacccccaaacactccactaccattgaagaagttcactctagaggataacaaatggaaattcaattgctacaaaaacactatcactt |
12794993 |
T |
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| Q |
118 |
ttgaaacatcacaatttttccacacttttcccacctccccgagtaaaaaggaggaataaattcccaacataaatatagataggtagaattcacaacagtg |
217 |
Q |
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|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
12794994 |
ttgaaacatcacaacgtttccacacttttcccacctccccgattaaaaaggaggaataaattcccgacataaatatagataggtagaattcacaacagtg |
12795093 |
T |
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| Q |
218 |
aacgtgctatagttgtgcatcaaatgagttcgatcaatttcgggccacaaacctcaaactagagttgaacaaaatatgtgtataactcagccatttctgg |
317 |
Q |
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| T |
12795094 |
aacgtactatggttgtgcatcaaacgagttcggtcaatttcgggccacaaacctcaaactagagttgaacaaaatatgtgtataactcagccatttctgg |
12795193 |
T |
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| Q |
318 |
tcgtttttgacatttgattggtcagttggcggtctgttcagtttggaggattcactggtggg-ttattcagtctctg |
393 |
Q |
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|| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| |
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| T |
12795194 |
tcatttttgacgtttgattggtcagttggcggtctgttcagtttggaggattcactaatgggtttattcagtttctg |
12795270 |
T |
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