View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2389_low_15 (Length: 349)

Name: NF2389_low_15
Description: NF2389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2389_low_15
NF2389_low_15
[»] chr2 (9 HSPs)
chr2 (63-336)||(11426140-11426412)
chr2 (11-59)||(12962024-12962072)
chr2 (15-53)||(45264045-45264083)
chr2 (5-58)||(10456389-10456441)
chr2 (10-60)||(11088215-11088264)
chr2 (13-59)||(45157530-45157576)
chr2 (14-59)||(1580603-1580648)
chr2 (11-60)||(33493476-33493525)
chr2 (15-63)||(3911223-3911271)
[»] chr4 (14 HSPs)
chr4 (5-57)||(42881381-42881433)
chr4 (11-60)||(27736941-27736990)
chr4 (10-60)||(28967562-28967612)
chr4 (11-60)||(33491954-33492003)
chr4 (11-60)||(50187503-50187552)
chr4 (11-59)||(51944435-51944483)
chr4 (11-45)||(46663346-46663380)
chr4 (10-59)||(43959341-43959390)
chr4 (14-60)||(48647383-48647429)
chr4 (13-59)||(53936873-53936919)
chr4 (10-59)||(17370634-17370682)
chr4 (10-59)||(48207078-48207126)
chr4 (9-46)||(52324324-52324360)
chr4 (14-46)||(50607697-50607729)
[»] chr8 (10 HSPs)
chr8 (10-53)||(27171920-27171963)
chr8 (10-53)||(24377315-24377358)
chr8 (10-59)||(31158561-31158610)
chr8 (10-60)||(17792202-17792252)
chr8 (13-60)||(29454570-29454617)
chr8 (10-60)||(43331743-43331792)
chr8 (10-60)||(44309565-44309614)
chr8 (10-59)||(34047775-34047823)
chr8 (10-46)||(2731802-2731838)
chr8 (10-49)||(24937947-24937987)
[»] chr7 (18 HSPs)
chr7 (11-60)||(41742580-41742629)
chr7 (12-59)||(15591384-15591431)
chr7 (10-46)||(2290803-2290839)
chr7 (11-59)||(16087299-16087347)
chr7 (14-60)||(23608353-23608399)
chr7 (11-65)||(43631408-43631462)
chr7 (11-60)||(17020071-17020119)
chr7 (10-60)||(1343018-1343067)
chr7 (10-60)||(30878314-30878364)
chr7 (10-59)||(11640295-11640343)
chr7 (15-60)||(29682043-29682088)
chr7 (10-46)||(2932938-2932973)
chr7 (10-46)||(12395207-12395242)
chr7 (14-42)||(23560833-23560861)
chr7 (14-46)||(36533409-36533441)
chr7 (14-46)||(41771770-41771802)
chr7 (14-46)||(46291461-46291493)
chr7 (10-46)||(49079266-49079301)
[»] chr6 (8 HSPs)
chr6 (11-60)||(29023967-29024016)
chr6 (14-58)||(13719112-13719156)
chr6 (11-59)||(31644760-31644808)
chr6 (10-53)||(4979445-4979488)
chr6 (13-59)||(9661752-9661798)
chr6 (14-59)||(6093660-6093705)
chr6 (10-59)||(7344674-7344722)
chr6 (10-46)||(24151483-24151518)
[»] chr3 (21 HSPs)
chr3 (11-60)||(4577632-4577681)
chr3 (10-59)||(8433437-8433486)
chr3 (11-60)||(37359862-37359911)
chr3 (10-59)||(45636039-45636088)
chr3 (11-60)||(19914040-19914089)
chr3 (10-59)||(50030109-50030158)
chr3 (11-60)||(9251857-9251906)
chr3 (11-59)||(52024790-52024838)
chr3 (12-59)||(8965915-8965962)
chr3 (13-60)||(29491662-29491709)
chr3 (21-60)||(54262894-54262933)
chr3 (10-60)||(4521627-4521676)
chr3 (11-53)||(35749272-35749314)
chr3 (14-59)||(29806017-29806062)
chr3 (13-46)||(40477770-40477803)
chr3 (13-46)||(42622210-42622243)
chr3 (14-59)||(46671337-46671382)
chr3 (13-46)||(50247237-50247270)
chr3 (14-46)||(5528713-5528745)
chr3 (10-46)||(47175480-47175515)
chr3 (15-59)||(50412435-50412479)
[»] chr1 (20 HSPs)
chr1 (10-59)||(26308560-26308609)
chr1 (10-53)||(24511594-24511637)
chr1 (10-60)||(32145026-32145076)
chr1 (15-53)||(34101068-34101106)
chr1 (10-59)||(31401361-31401410)
chr1 (12-60)||(46707705-46707753)
chr1 (10-53)||(17525442-17525485)
chr1 (11-53)||(25082108-25082150)
chr1 (12-46)||(44382376-44382410)
chr1 (18-59)||(45809447-45809488)
chr1 (9-60)||(14077328-14077378)
chr1 (11-58)||(51610882-51610929)
chr1 (10-60)||(5360560-5360609)
chr1 (14-60)||(17554179-17554225)
chr1 (13-59)||(31075971-31076017)
chr1 (10-60)||(33081987-33082036)
chr1 (10-59)||(44978869-44978917)
chr1 (10-46)||(29953957-29953993)
chr1 (10-46)||(43536890-43536925)
chr1 (12-60)||(51056196-51056244)
[»] scaffold0174 (1 HSPs)
scaffold0174 (15-59)||(32566-32610)
[»] chr5 (15 HSPs)
chr5 (11-53)||(10401052-10401094)
chr5 (10-59)||(13645866-13645915)
chr5 (10-58)||(10568828-10568876)
chr5 (10-60)||(32455301-32455351)
chr5 (11-60)||(24432150-24432199)
chr5 (10-53)||(1446076-1446119)
chr5 (15-58)||(17068994-17069037)
chr5 (10-60)||(19238793-19238842)
chr5 (14-60)||(32993688-32993734)
chr5 (10-59)||(6335390-6335438)
chr5 (10-59)||(16602721-16602769)
chr5 (14-59)||(36339208-36339253)
chr5 (10-46)||(23408265-23408300)
chr5 (14-46)||(33210383-33210415)
chr5 (10-46)||(38355074-38355110)
[»] scaffold0775 (1 HSPs)
scaffold0775 (11-59)||(197-245)
[»] scaffold0008 (1 HSPs)
scaffold0008 (10-53)||(45113-45156)


Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 63 - 336
Target Start/End: Complemental strand, 11426412 - 11426140
Alignment:
Q  63 atagagacctaatatataaaattatttcgcactttcgatgcatcaaaagtttaatggtattgcacggacaagttaatcatccaataagaaaccatcaaac 162  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11426412 atagggacctaatatataaaattatttcgcactatcgatgcatcaaaagtttaatggtattgcacagacaagttaatcatccaataagaaaccatcaaac 11426313  T
Q  163 tgccatgccatgtcattgaaatttagtggaatacaagatgttcattggatgtcagtgcaacttctattttctcatattacaaaatgccatcaacaagata 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  11426312 tgccatgccatgtcattgaaatttagtggaatacaagatgttcattggatgtcagtgcaacttctattttctcatattacaaaatg-catcaacaagatc 11426214  T
Q  263 aaatatttcaaaactttaacggtattattgcaccaagagtgtaatcgttcaataagaaaccatcaatcaagctg 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11426213 aaatatttcaaaactttaacggtattattgcaccaagagtgtaatcgttcaataagaaaccgtcaatcaagctg 11426140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 12962024 - 12962072
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  12962024 ttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgcc 12962072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 45264045 - 45264083
Alignment:
Q  15 tgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  45264045 tgtaccggtacactcaaatatgttgggtgtaccgtagaa 45264083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 10456389 - 10456441
Alignment:
Q  5 tagactttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgc 58  Q
    |||| |||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  10456389 tagagtttggtgtaccgttacactcaaatatgtt-ggtgtacggtagaatttgc 10456441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 11088264 - 11088215
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  11088264 tttggtgtaccggtacactcaaatat-ttgggtgtaccatagaatttgcct 11088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 45157576 - 45157530
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| ||||||||||  ||||| |||||    
T  45157576 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 45157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 1580603 - 1580648
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  1580603 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 1580648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 33493525 - 33493476
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||| |||||||||||||||| |||||||||  |||||| ||||||    
T  33493525 ttggtgtatcggtacactcaaatatattgggtgtatagtagaatttgcct 33493476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 3911271 - 3911223
Alignment:
Q  15 tgtaccggtacactcaaatatgttgggtgtacggtagaaattgcctcaa 63  Q
    ||||||||||||||||||  | | | |||||||||||||||||||||||    
T  3911271 tgtaccggtacactcaaaattatcgagtgtacggtagaaattgcctcaa 3911223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 42881381 - 42881433
Alignment:
Q  5 tagactttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42881381 tagactttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattg 42881433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 27736941 - 27736990
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  27736941 ttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgcct 27736990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 28967612 - 28967562
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  28967612 tttggtgtaccggtacactcaaatatgtttggtgtagggtagaatttgcct 28967562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 33491954 - 33492003
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  33491954 ttggtgtaccggtacactcaaatatattgggtgtaccgtagaatttgcct 33492003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 50187552 - 50187503
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  50187552 ttggtgtaccggtacactcaaatatgttgggtgtaccgtaaaatttgcct 50187503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 51944483 - 51944435
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  51944483 ttggtgtaccagtacactcaaatatgttgggtgtaccgtagaatttgcc 51944435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 46663380 - 46663346
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgta 45  Q
    |||||||||||||||||||||||||||||||||||    
T  46663380 ttggtgtaccggtacactcaaatatgttgggtgta 46663346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 43959341 - 43959390
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||| |||| ||||||||||| |||||||||||||||||||||| |||||    
T  43959341 tttgatgtatcggtacactcagatatgttgggtgtacggtagaatttgcc 43959390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 48647383 - 48647429
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  48647383 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 48647429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 53936873 - 53936919
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| ||||||||||  ||||| |||||    
T  53936873 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 53936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 17370634 - 17370682
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  17370634 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcc 17370682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 48207126 - 48207078
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  48207126 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcc 48207078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 52324324 - 52324360
Alignment:
Q  9 ctttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||||| |||||||||||||    
T  52324324 ctttggtgtaccggtacactcaaa-atgttgggtgtac 52324360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 50607729 - 50607697
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||| ||||||||||    
T  50607729 gtgtaccggtacactcaaatatattgggtgtac 50607697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 27171963 - 27171920
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27171963 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 27171920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 24377358 - 24377315
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  24377358 tttggtgtaccggtacactcaaatatgttgggtgtaccgtagaa 24377315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 31158610 - 31158561
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||    
T  31158610 tttggtgtaccggtgcactcaaatatgttgggtgtaccgtagaatttgcc 31158561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 17792252 - 17792202
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||    
T  17792252 tttggtgtaccagtacactcaaatatgttggatgtatggtagaatttgcct 17792202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 29454570 - 29454617
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  29454570 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 29454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 43331792 - 43331743
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  43331792 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcct 43331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 44309614 - 44309565
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  44309614 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcct 44309565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 34047775 - 34047823
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||||| ||||||||||||  ||||| |||||    
T  34047775 tttggtgtaccggtacactcaaat-tgttgggtgtaccatagaatttgcc 34047823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 2731838 - 2731802
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||| |||||||| |||||||||||||||||    
T  2731838 tttggtgtactggtacacttaaatatgttgggtgtac 2731802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 24937947 - 24937987
Alignment:
Q  10 tttggtgtaccgg-tacactcaaatatgttgggtgtacggt 49  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  24937947 tttggtgtaccggatacactcaaatatattgggtgtacggt 24937987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 41742629 - 41742580
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  41742629 ttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgcct 41742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 15591431 - 15591384
Alignment:
Q  12 tggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  15591431 tggtgtactggtacactcaaatatgttgggtgtacggtagaatttgcc 15591384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 2290839 - 2290803
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  2290839 tttggtgtaccggtacactcaaatatgttgggtgtac 2290803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 16087299 - 16087347
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  16087299 ttggtgtaccggtacactcaaatatgttaggtgtaccgtagaatttgcc 16087347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 23608353 - 23608399
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  23608353 gtgtaccagtacactcaaatatgttgggtgtaccgtagaatttgcct 23608399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 43631408 - 43631462
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcctcaata 65  Q
    |||||||||||||||||||||||||||| |||||||  ||||| |||||| ||||    
T  43631408 ttggtgtaccggtacactcaaatatgttaggtgtaccatagaatttgcctaaata 43631462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 17020119 - 17020071
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  17020119 ttggtgtaccggtacactcaaatatg-tgggtgtacagtagaatttgcct 17020071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 1343067 - 1343018
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||| ||||||||||||  ||||| ||||||    
T  1343067 tttggtgtaccggtacactcaaat-tgttgggtgtaccatagaatttgcct 1343018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 30878364 - 30878314
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||| ||||||| ||||||||||| ||||||||||| || ||||||    
T  30878364 tttggtgtatcggtacattcaaatatgttcggtgtacggtaaaatttgcct 30878314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 11640343 - 11640295
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  11640343 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcc 11640295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 29682088 - 29682043
Alignment:
Q  15 tgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||| |||||||||||||||||| ||||| |||||| ||||||    
T  29682088 tgtaccgatacactcaaatatgttggatgtaccgtagaatttgcct 29682043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 2932938 - 2932973
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| |||||||||||||    
T  2932938 tttggtgtaccggtacactcaaa-atgttgggtgtac 2932973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 12395242 - 12395207
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| |||||||||||||    
T  12395242 tttggtgtaccggtacactcaaa-atgttgggtgtac 12395207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 23560861 - 23560833
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggt 42  Q
    |||||||||||||||||||||||||||||    
T  23560861 gtgtaccggtacactcaaatatgttgggt 23560833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 36533409 - 36533441
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||| ||||||||||    
T  36533409 gtgtaccggtacactcaaatatattgggtgtac 36533441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 41771770 - 41771802
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||| ||||||||||    
T  41771770 gtgtaccggtacactcaaatatattgggtgtac 41771802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 46291461 - 46291493
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||| ||||||||||    
T  46291461 gtgtaccggtacactcaaatatattgggtgtac 46291493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 49079301 - 49079266
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| |||||||||||||    
T  49079301 tttggtgtaccggtacactcaaa-atgttgggtgtac 49079266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 29023967 - 29024016
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  29023967 ttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgcct 29024016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 13719156 - 13719112
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgc 58  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||    
T  13719156 gtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgc 13719112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 31644760 - 31644808
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  31644760 ttggtgtaccggtacactcaaatatgttgagtgtacgatagaatttgcc 31644808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 4979445 - 4979488
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  4979445 tttggtgtaccgatacactcaaatatgttgggtgtaccgtagaa 4979488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 9661798 - 9661752
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| ||||||||||  ||||| |||||    
T  9661798 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 9661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 6093705 - 6093660
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||| |||||||||||||||||||||||  |||||| |||||    
T  6093705 gtgtaccgatacactcaaatatgttgggtgtatcgtagaatttgcc 6093660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 7344674 - 7344722
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||||| ||||||||||||  ||||| |||||    
T  7344674 tttggtgtaccggtacactcaaat-tgttgggtgtaccatagaatttgcc 7344722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 24151483 - 24151518
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| |||||||||||||    
T  24151483 tttggtgtaccggtacactcaaa-atgttgggtgtac 24151518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 4577632 - 4577681
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  4577632 ttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgcct 4577681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 8433486 - 8433437
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  8433486 tttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgcc 8433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 37359862 - 37359911
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37359862 ttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgcct 37359911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 45636039 - 45636088
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  45636039 tttggtataccggtacactcaaatatgttgggtgtacggtagaatttgcc 45636088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 19914089 - 19914040
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  19914089 ttggtataccggtacactcaaatatgttgggtgtaccgtagaatttgcct 19914040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 50030109 - 50030158
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||| |||| |||||||||||||||||||||||||||||||| |||||    
T  50030109 tttggtatacctgtacactcaaatatgttgggtgtacggtagaatttgcc 50030158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 9251906 - 9251857
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||||||||| |||||| ||| || ||||||    
T  9251906 ttggtgtaccggtacactcaaatatgttgagtgtaccgtaaaatttgcct 9251857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 52024790 - 52024838
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||||||||||  ||||| |||||| |||||    
T  52024790 ttggtgtaccggtacactcaaatatgttgaatgtaccgtagaatttgcc 52024838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 8965962 - 8965915
Alignment:
Q  12 tggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||| ||||||||||||||||||| ||||| |||||| |||||    
T  8965962 tggtgtaccagtacactcaaatatgttggatgtaccgtagaatttgcc 8965915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 29491709 - 29491662
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  29491709 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 29491662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 54262894 - 54262933
Alignment:
Q  21 ggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  54262894 ggtacactcaaatatgttgggtgtaccgtagaatttgcct 54262933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 4521627 - 4521676
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  4521627 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcct 4521676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 35749272 - 35749314
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    ||||||||||| |||||||||||||||||| ||||| ||||||    
T  35749272 ttggtgtaccgatacactcaaatatgttggatgtaccgtagaa 35749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 29806062 - 29806017
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||| |||||||||||||| ||||||| |||||| |||||    
T  29806062 gtgtaccggtgcactcaaatatgttaggtgtaccgtagaatttgcc 29806017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 40477803 - 40477770
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  40477803 ggtgtaccggtacactcaaatatattgggtgtac 40477770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 42622210 - 42622243
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  42622210 ggtgtaccggtacactcaaatatattgggtgtac 42622243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 46671382 - 46671337
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||| |||||||||| ||| || |||||    
T  46671382 gtgtaccggtacactcaaatatattgggtgtaccgtataatttgcc 46671337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 50247270 - 50247237
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  50247270 ggtgtaccggtacactcaaatatattgggtgtac 50247237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 5528745 - 5528713
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||||| |||||||    
T  5528745 gtgtaccggtacactcaaatatgttaggtgtac 5528713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 47175515 - 47175480
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| |||||||||||||    
T  47175515 tttggtgtaccggtacactcaaa-atgttgggtgtac 47175480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 50412435 - 50412479
Alignment:
Q  15 tgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||| ||||||||||  ||||| |||||    
T  50412435 tgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 50412479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 26308560 - 26308609
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  26308560 tttggtgtaccggtacactcaaatatgttgggtgtacgatagaatttgcc 26308609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 24511637 - 24511594
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  24511637 tttggtgtaccggtacactcaaatatgttgggtgtaccgtagaa 24511594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 32145026 - 32145076
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  32145026 tttgatgtaccggtacactcaaaaatgttgggtgtacggtagaatttgcct 32145076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 34101068 - 34101106
Alignment:
Q  15 tgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34101068 tgtaccggtacactcaaatatgttgggtgtacggtagaa 34101106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 31401410 - 31401361
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||    
T  31401410 tttggtgtaccggtgcactcaaatatgttgggtgtaccgtagaatttgcc 31401361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 46707705 - 46707753
Alignment:
Q  12 tggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  46707705 tggtgtaccggtacactcaaatatgttggatgtaccgtagaatttgcct 46707753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 17525485 - 17525442
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    |||| ||||||||||||||||||||||| |||||||||||||||    
T  17525485 tttgatgtaccggtacactcaaatatgtcgggtgtacggtagaa 17525442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 25082108 - 25082150
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    |||||||||||||||||||||||||||| ||||||| ||||||    
T  25082108 ttggtgtaccggtacactcaaatatgttaggtgtaccgtagaa 25082150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 44382376 - 44382410
Alignment:
Q  12 tggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||||||||||||||||    
T  44382376 tggtgtaccggtacactcaaatatgttgggtgtac 44382410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 45809488 - 45809447
Alignment:
Q  18 accggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  45809488 accggtacactcaaatatgttgggtgtacagtagaatttgcc 45809447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 14077378 - 14077328
Alignment:
Q  9 ctttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||| ||||||    
T  14077378 ctttggtgtaccggtacactcaaa-atgttggatgtaccgtagaatttgcct 14077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 51610882 - 51610929
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgc 58  Q
    |||||||||||||||||||||||||||| | |||||| ||||| ||||    
T  51610882 ttggtgtaccggtacactcaaatatgttagatgtacgatagaatttgc 51610929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 5360560 - 5360609
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  5360560 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcct 5360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 17554179 - 17554225
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  17554179 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 17554225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 31075971 - 31076017
Alignment:
Q  13 ggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| ||||||||||  ||||| |||||    
T  31075971 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 31076017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 33082036 - 33081987
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  33082036 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcct 33081987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 44978917 - 44978869
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||||| ||||||||||||  ||||| |||||    
T  44978917 tttggtgtaccggtacactcaaat-tgttgggtgtaccatagaatttgcc 44978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 29953957 - 29953993
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||||||| |||| |||||    
T  29953957 tttggtgtaccggtacactcaaatattttggatgtac 29953993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 43536925 - 43536890
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||||||||||||||| |||||||||||||    
T  43536925 tttggtgtaccggtacactcaaa-atgttgggtgtac 43536890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 51056244 - 51056196
Alignment:
Q  12 tggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||||| || |||||||  ||||| ||||||    
T  51056244 tggtgtaccggtacactcaaatatattaggtgtaccatagaatttgcct 51056196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 32610 - 32566
Alignment:
Q  15 tgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  32610 tgtaccggtacactcaaatatgttgggtgtacggtagaatttgcc 32566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 10401052 - 10401094
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  10401052 ttggtgtaccggtacactcaaatatgttgggtgtaccgtagaa 10401094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 13645866 - 13645915
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||||    
T  13645866 tttgatgtaccggtacactcaaatatgttgagtgtacggtagaatttgcc 13645915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 10568828 - 10568876
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgc 58  Q
    |||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  10568828 tttggtgtaccggtgcactcaaatatgttgggtgtaccgtagaatttgc 10568876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 32455351 - 32455301
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||| |||||||||||||||||||||||||||||| ||||| || ||||||    
T  32455351 tttgatgtaccggtacactcaaatatgttgggtgtgcggtaaaatttgcct 32455301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 24432150 - 24432199
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||| || |||||||||||||||||||||||| |||||| ||||||    
T  24432150 ttggtgtatcgatacactcaaatatgttgggtgtaccgtagaatttgcct 24432199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 1446076 - 1446119
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    ||||||||| || |||||||||||||||||||||||| ||||||    
T  1446076 tttggtgtatcgatacactcaaatatgttgggtgtaccgtagaa 1446119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 17069037 - 17068994
Alignment:
Q  15 tgtaccggtacactcaaatatgttgggtgtacggtagaaattgc 58  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||    
T  17069037 tgtaccggtacactcaaatatgttggatgtacagtagaatttgc 17068994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 19238842 - 19238793
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  19238842 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcct 19238793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 32993688 - 32993734
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcct 60  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||||||    
T  32993688 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 32993734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 6335438 - 6335390
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  6335438 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcc 6335390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 16602721 - 16602769
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  16602721 tttggtgtaccggtacactcaaa-atgttgggtgtaccatagaatttgcc 16602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 36339208 - 36339253
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  36339208 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 36339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 23408300 - 23408265
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||||| ||||||||||||    
T  23408300 tttggtgtaccggtacactcaaat-tgttgggtgtac 23408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 33210415 - 33210383
Alignment:
Q  14 gtgtaccggtacactcaaatatgttgggtgtac 46  Q
    |||||||||||||||||||||| ||||||||||    
T  33210415 gtgtaccggtacactcaaatatattgggtgtac 33210383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 38355074 - 38355110
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtac 46  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  38355074 tttggtgtaccagtacactcaaatatgttaggtgtac 38355110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 197 - 245
Alignment:
Q  11 ttggtgtaccggtacactcaaatatgttgggtgtacggtagaaattgcc 59  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  197 ttggtgtaccggtacactcaaatatgttgggtgtaccatagaatttgcc 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 45156 - 45113
Alignment:
Q  10 tttggtgtaccggtacactcaaatatgttgggtgtacggtagaa 53  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  45156 tttggtgtactggtacactcatatatgttgggtgtacggtagaa 45113  T

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