View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2389_low_21 (Length: 298)
Name: NF2389_low_21
Description: NF2389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2389_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 47648703 - 47648447
Alignment:
| Q |
18 |
atattgtcctgtttatcttttctaggaactatttgaatggtgaaaagagtgcatagagaacaattactattcatttcaatatatgattttcaaatctaat |
117 |
Q |
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| T |
47648703 |
atattgtcctgtttatcttttctaggaactatttgaatggtgaaaagagtgcatagagaacaattactattcatttcaatatatgattttcaaatctaat |
47648604 |
T |
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| Q |
118 |
aatttattttaaaaattaatcagcaacaatatttataaagtagtacaaggaatatatgctcatggtctcattcatcactctcttaagaggattgcttgat |
217 |
Q |
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| T |
47648603 |
aatttattttaaaaattaatcagcaacaatatttataaagtagtacaaggaatatatgctcatggtctcattcatcactctcttaagaggattgcttgat |
47648504 |
T |
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| Q |
218 |
gtcacaaatatcataggattgagagcatgctgtctacatttctgcatataggtgtat |
274 |
Q |
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| T |
47648503 |
gtcacaaatatcataggattgagagcatgctgtctacatttctgcatataggtgtat |
47648447 |
T |
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