View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2389_low_37 (Length: 235)
Name: NF2389_low_37
Description: NF2389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2389_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 42691602 - 42691382
Alignment:
| Q |
1 |
gtctttgtaataaaatgttttcaaataataaaataattatctttgtttactgtttagtgcaaggagaaaatggccactgattgaatatttgaacttaact |
100 |
Q |
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| T |
42691602 |
gtctttgtaataaaatgtttacaaataataaaataattatctttgtttactgtttagtgcaaggagaaaatggccactgattgaatatttgaacttaact |
42691503 |
T |
|
| Q |
101 |
acatgtaacacttttggttggatcatttgttctgtgcatgaactaataataatacagaaatacaaagaagttaccaatcatactataaggagattaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
42691502 |
acatgtaacacttttggttggatcatttgttctgtgcatgaactaataataatacagaaatacaaagaagttaccaataatactataaggagattaaatt |
42691403 |
T |
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| Q |
201 |
aatttgttcactagtgtctgt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
42691402 |
aatttgttcactagtgtctgt |
42691382 |
T |
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