View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2390_low_5 (Length: 212)
Name: NF2390_low_5
Description: NF2390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2390_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 37860578 - 37860765
Alignment:
| Q |
1 |
ttaaagaagaaatcctctctcctaagatcttaggcattaaaaataatattttaacaagcaatctttaataaaaactaatatttggagtcaattatttgtt |
100 |
Q |
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| T |
37860578 |
ttaaagaagaaatcctctctcctaagatcttaggcattaaaaataatattttgacattcaatcttgaataaaaactaatatttggagtcaagtatttgtt |
37860677 |
T |
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| Q |
101 |
gcttaactttatcaccatttgagtaaaatgtagtttgatcccttgaaaattgctta---aatactagatagcaatttgagttgaaccc |
185 |
Q |
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| T |
37860678 |
gcttaactttatcaccatttgagtaaaatgtagtttgatcccttgaaaattgcttaaataatactaaatagcaatttgagttgaaccc |
37860765 |
T |
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