View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2391_high_17 (Length: 363)

Name: NF2391_high_17
Description: NF2391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2391_high_17
NF2391_high_17
[»] chr6 (6 HSPs)
chr6 (20-318)||(6626200-6626487)
chr6 (37-132)||(6626600-6626695)
chr6 (118-152)||(6626517-6626551)
chr6 (210-255)||(7470758-7470803)
chr6 (209-258)||(17382074-17382123)
chr6 (185-257)||(29283806-29283878)
[»] chr1 (5 HSPs)
chr1 (189-250)||(51031873-51031934)
chr1 (177-238)||(17669655-17669716)
chr1 (110-158)||(8797084-8797132)
chr1 (177-253)||(16033440-16033516)
chr1 (215-255)||(24506941-24506981)
[»] chr4 (3 HSPs)
chr4 (189-258)||(11949665-11949734)
chr4 (210-253)||(27372382-27372425)
chr4 (177-242)||(39093565-39093630)
[»] scaffold0045 (2 HSPs)
scaffold0045 (189-253)||(63857-63921)
scaffold0045 (189-253)||(71189-71253)
[»] chr8 (3 HSPs)
chr8 (209-253)||(42200684-42200728)
chr8 (178-253)||(35061631-35061706)
chr8 (189-253)||(8137930-8137994)
[»] chr7 (4 HSPs)
chr7 (178-254)||(17883882-17883958)
chr7 (189-253)||(5526720-5526784)
chr7 (205-245)||(42753445-42753485)
chr7 (219-255)||(49172317-49172353)
[»] chr5 (7 HSPs)
chr5 (177-253)||(20175720-20175796)
chr5 (189-253)||(28344549-28344613)
chr5 (176-253)||(6489002-6489079)
chr5 (207-253)||(14232860-14232908)
chr5 (209-262)||(17064886-17064939)
chr5 (209-245)||(34860168-34860204)
chr5 (209-253)||(40715971-40716015)
[»] chr3 (3 HSPs)
chr3 (205-257)||(31316628-31316680)
chr3 (209-250)||(21549036-21549077)
chr3 (209-258)||(29687072-29687121)
[»] chr2 (5 HSPs)
chr2 (205-251)||(1238159-1238205)
chr2 (208-253)||(23983999-23984044)
chr2 (189-258)||(30836301-30836370)
chr2 (209-253)||(27244652-27244696)
chr2 (190-245)||(34242825-34242881)


Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 318
Target Start/End: Complemental strand, 6626487 - 6626200
Alignment:
Q  20 aatactaattattggtaatgaggaatgatcaagtagcataatgagaagtaatatcacaaaattgaatcagaaaaggaaaatgttttaactaatttatatt 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6626487 aatactaattattggttatgaggaatgatcaagtagcataatgagaagtaatatcacaaaattgaatcagaaaaggaaaatgttttaactaatttatatt 6626388  T
Q  120 gtttgagatttttaactaatttatggatcaatatcaattcttggtaatannnnnnnggtggtagccggagtttgaacccaaaattttgtatataatatac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||| || |||||||||||||||||| |    
T  6626387 gtttgagatttttaactaatttatggatcaatatcaattcttggtattattttttttgtggtagccggagtttgaatccgaaattttgtatataatatgc 6626288  T
Q  220 attgtccctatcaattgagctaagcttacgaggataaattcttggtaatgttttatatgcaatgaaactgtcataattggtaattaaaattgaaataag 318  Q
    ||||| ||| ||||||||| ||||||  ||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6626287 attgttcctgtcaattgagttaagct--cg---------tcttggtaatgttttatatgcaatgaaactgtcataattggtaattaaaattgaaataag 6626200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 6626695 - 6626600
Alignment:
Q  37 atgaggaatgatcaagtagcataatgagaagtaatatcacaaaattgaatcagaaaaggaaaatgttttaactaatttatattgtttgagattttt 132  Q
    ||||| ||| ||||||||||||||||||||  |||||||||||| ||||| |||||| | |||||||| ||||||||||||| ||||||| |||||    
T  6626695 atgagaaattatcaagtagcataatgagaatgaatatcacaaaaatgaatgagaaaaaggaaatgtttgaactaatttatatcgtttgagtttttt 6626600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 152
Target Start/End: Complemental strand, 6626551 - 6626517
Alignment:
Q  118 ttgtttgagatttttaactaatttatggatcaata 152  Q
    ||||||||||||| |||||||||||||||||||||    
T  6626551 ttgtttgagatttctaactaatttatggatcaata 6626517  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 7470758 - 7470803
Alignment:
Q  210 tataatatacattgtccctatcaattgagctaagcttacgaggata 255  Q
    |||||||| |||| |||||| ||| |||||||||||||||||||||    
T  7470758 tataatatgcattatccctaccaactgagctaagcttacgaggata 7470803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 17382123 - 17382074
Alignment:
Q  209 atataatatacattgtccctatcaattgagctaagcttacgaggataaat 258  Q
    ||||| |||||||||||| || ||| ||||||||||| ||||||||||||    
T  17382123 atatattatacattgtccataccaactgagctaagctcacgaggataaat 17382074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 29283878 - 29283806
Alignment:
Q  185 cggagtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgaggataaa 257  Q
    |||||||||||||| | |  ||| ||||| ||||||||||| ||| ||| |||| |||||||||||| |||||    
T  29283878 cggagtttgaaccctagaccttgcatatattatacattgtctctaccaactgagttaagcttacgagcataaa 29283806  T

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Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 51031934 - 51031873
Alignment:
Q  189 gtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacga 250  Q
    |||||||||| | |||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  51031934 gtttgaaccctagattttgtatataatatgcattgtcactatcaattgagctaagtttacga 51031873  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 17669716 - 17669655
Alignment:
Q  177 gtggtagccggagtttgaacccaaaattttgtatataatatacattgtccctatcaattgag 238  Q
    ||||| ||||||||||||||||  ||  ||| ||||| ||||||||||||||||||| ||||    
T  17669716 gtggtggccggagtttgaaccccgaaccttgcatatattatacattgtccctatcaactgag 17669655  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 8797084 - 8797132
Alignment:
Q  110 aatttatattgtttgagatttttaactaatttatggatcaatatcaatt 158  Q
    ||||||||||||||||| |||||||| |||||  |||||||||| ||||    
T  8797084 aatttatattgtttgaggtttttaaccaattttgggatcaatataaatt 8797132  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 16033440 - 16033516
Alignment:
Q  177 gtggtagccggagtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    ||||| |||||||||||||||| | |  ||| ||||| ||| ||||||||||||||| ||||  ||||| |||||||    
T  16033440 gtggtggccggagtttgaaccccagaccttgcatatattatgcattgtccctatcaactgagtcaagctcacgagga 16033516  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 24506941 - 24506981
Alignment:
Q  215 tatacattgtccctatcaattgagctaagcttacgaggata 255  Q
    |||||||||||  |||||| |||||||||||||||||||||    
T  24506941 tatacattgtctatatcaactgagctaagcttacgaggata 24506981  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 11949665 - 11949734
Alignment:
Q  189 gtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgaggataaat 258  Q
    ||||||||||  ||||||||||||| |||  ||||| | |||||| ||||||||||| ||||||||||||    
T  11949665 gtttgaaccccgaattttgtatatattatgtattgttcttatcaactgagctaagctcacgaggataaat 11949734  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 27372425 - 27372382
Alignment:
Q  210 tataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||||||| ||||||||| | |||||||||||||||||||||||    
T  27372425 tataatatgcattgtcccgaccaattgagctaagcttacgagga 27372382  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 39093565 - 39093630
Alignment:
Q  177 gtggtagccggagtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaa 242  Q
    ||||||| ||| |||||||||| ||| |||| ||||| ||| |||||||| || ||||||||||||    
T  39093565 gtggtagtcggggtttgaaccctaaactttgcatatattatgcattgtccttaccaattgagctaa 39093630  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 63921 - 63857
Alignment:
Q  189 gtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||||||||  ||| |||||||||| ||||||||||||||| ||| |||||||| || |||||||    
T  63921 gtttgaacctcaaactttgtatatattatacattgtccctaccaactgagctaaactcacgagga 63857  T

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Target: scaffold0045; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 71253 - 71189
Alignment:
Q  189 gtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||||||||  ||| |||||||||| ||||||||||||||| ||| |||||||| || |||||||    
T  71253 gtttgaacctcaaactttgtatatattatacattgtccctaccaactgagctaaactcacgagga 71189  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 42200684 - 42200728
Alignment:
Q  209 atataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||    
T  42200684 atatattatacattgtccctatcaactgagctaagctcacgagga 42200728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 35061706 - 35061631
Alignment:
Q  178 tggtagccggagtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||| ||||| |||||||||  |||| ||||||||| |||  |||||| ||||||||||| ||||||| |||||||    
T  35061706 tggtggccggggtttgaacctcaaatgttgtatatattatgtattgtctctatcaattgaactaagctcacgagga 35061631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 8137994 - 8137930
Alignment:
Q  189 gtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||||||||| ||| |||| ||||  ||| |||||||| || ||| |||||||||||||||||||    
T  8137994 gtttgaaccccaaactttgcatattttatgcattgtccataccaactgagctaagcttacgagga 8137930  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 17883958 - 17883882
Alignment:
Q  178 tggtagccggagtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgaggat 254  Q
    |||| |||||||||||||||||| |  ||| ||||| |||||||| ||| |||||| ||||||||| | ||||||||    
T  17883958 tggtggccggagtttgaacccaagaccttgcatatattatacattatccatatcaagtgagctaaggtcacgaggat 17883882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 5526784 - 5526720
Alignment:
Q  189 gtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||||||||| |||| || |||||| ||| |||||||| || ||| ||||||||||| |||||||    
T  5526784 gtttgaaccccaaatcttatatatattatgcattgtccataccaactgagctaagctcacgagga 5526720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 42753445 - 42753485
Alignment:
Q  205 ttgtatataatatacattgtccctatcaattgagctaagct 245  Q
    ||||||||| ||||||||||||||| |||||||| ||||||    
T  42753445 ttgtatatattatacattgtccctaccaattgagttaagct 42753485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 49172317 - 49172353
Alignment:
Q  219 cattgtccctatcaattgagctaagcttacgaggata 255  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  49172317 cattgtccctatcaactgagctaagctcacgaggata 49172353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 20175796 - 20175720
Alignment:
Q  177 gtggtagccggagtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    ||||| ||||||||| |||| |  ||| ||||||||| |||||||||||| || ||| ||||||||||| |||||||    
T  20175796 gtggtggccggagttcgaactctgaatcttgtatatattatacattgtccataccaactgagctaagctcacgagga 20175720  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 28344613 - 28344549
Alignment:
Q  189 gtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||||||||| |||  ||| ||||| |||||||||||||| |||| ||| |||||||||||||||    
T  28344613 gtttgaaccccaaaccttgcatatattatacattgtccctttcaactgaactaagcttacgagga 28344549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 6489079 - 6489002
Alignment:
Q  176 ggtggtagccggagtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||||| ||||| |||||||||| | |  ||| ||||| ||| ||||||||||| ||| ||||||||||| |||||||    
T  6489079 ggtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 6489002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 14232908 - 14232860
Alignment:
Q  207 gtatataatatacattgtccctat--caattgagctaagcttacgagga 253  Q
    ||||||| ||||||||||||||||  ||||||||||||||| |||||||    
T  14232908 gtatatattatacattgtccctatatcaattgagctaagctcacgagga 14232860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 17064886 - 17064939
Alignment:
Q  209 atataatatacattgtccctatcaattgagctaagcttacgaggataaattctt 262  Q
    ||||||||| || | |||||| |||||||| |||||| ||||||||||||||||    
T  17064886 atataatatgcaatatccctaccaattgagttaagctcacgaggataaattctt 17064939  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 34860168 - 34860204
Alignment:
Q  209 atataatatacattgtccctatcaattgagctaagct 245  Q
    |||||||||||| | ||||||||||||||||||||||    
T  34860168 atataatatacaatatccctatcaattgagctaagct 34860204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 40715971 - 40716015
Alignment:
Q  209 atataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    ||||| ||| |||||||| |||||||||||||||||| |||||||    
T  40715971 atatattatgcattgtccatatcaattgagctaagctcacgagga 40716015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 31316680 - 31316628
Alignment:
Q  205 ttgtatataatatacattgtccctatcaattgagctaagcttacgaggataaa 257  Q
    |||||||||||||||| | |||||||||| ||||||||||| ||| |||||||    
T  31316680 ttgtatataatatacaatatccctatcaactgagctaagctcacggggataaa 31316628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 21549077 - 21549036
Alignment:
Q  209 atataatatacattgtccctatcaattgagctaagcttacga 250  Q
    ||||| |||||||||||| |||||| ||||||||||||||||    
T  21549077 atatattatacattgtccatatcaactgagctaagcttacga 21549036  T

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Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 29687121 - 29687072
Alignment:
Q  209 atataatatacattgtccctatcaattgagctaagcttacgaggataaat 258  Q
    |||||||||| ||||||| |||||| ||||||||||| ||||||| ||||    
T  29687121 atataatatatattgtccatatcaactgagctaagctcacgaggacaaat 29687072  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 1238205 - 1238159
Alignment:
Q  205 ttgtatataatatacattgtccctatcaattgagctaagcttacgag 251  Q
    ||||||||| ||| |||||||||||||||||||| |||||| |||||    
T  1238205 ttgtatatattatgcattgtccctatcaattgagttaagctcacgag 1238159  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 23984044 - 23983999
Alignment:
Q  208 tatataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    |||||| ||| |||||||| || |||||||||||||||||||||||    
T  23984044 tatatattatgcattgtccataccaattgagctaagcttacgagga 23983999  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 30836301 - 30836370
Alignment:
Q  189 gtttgaacccaaaattttgtatataatatacattgtccctatcaattgagctaagcttacgaggataaat 258  Q
    ||||||||||  ||||||||| ||| ||| ||||||| ||  ||| ||||||||||||||||||| ||||    
T  30836301 gtttgaaccctgaattttgtaaatattatgcattgtctctgccaactgagctaagcttacgaggacaaat 30836370  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 27244696 - 27244652
Alignment:
Q  209 atataatatacattgtccctatcaattgagctaagcttacgagga 253  Q
    ||||| ||| ||||||||||||||| ||||||||||| |||||||    
T  27244696 atatattatgcattgtccctatcaactgagctaagctcacgagga 27244652  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 34242881 - 34242825
Alignment:
Q  190 tttgaacccaaaattttgtata-taatatacattgtccctatcaattgagctaagct 245  Q
    ||||||||| ||| |||| ||| || ||| |||||||||||||||||||||||||||    
T  34242881 tttgaaccccaaactttgcataatattatgcattgtccctatcaattgagctaagct 34242825  T

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