View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2391_high_29 (Length: 294)

Name: NF2391_high_29
Description: NF2391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2391_high_29
NF2391_high_29
[»] chr3 (27 HSPs)
chr3 (18-234)||(13609322-13609528)
chr3 (18-231)||(14149906-14150125)
chr3 (18-227)||(14074406-14074600)
chr3 (252-294)||(9862538-9862580)
chr3 (252-294)||(10811140-10811182)
chr3 (252-294)||(19961937-19961979)
chr3 (252-294)||(32362938-32362980)
chr3 (252-294)||(34456795-34456837)
chr3 (252-294)||(23553613-23553655)
chr3 (252-294)||(26014817-26014858)
chr3 (252-294)||(32146010-32146052)
chr3 (252-294)||(32457780-32457821)
chr3 (252-294)||(33389013-33389055)
chr3 (252-294)||(42357105-42357146)
chr3 (252-294)||(46623912-46623953)
chr3 (252-294)||(47472334-47472375)
chr3 (252-294)||(52939658-52939699)
chr3 (252-294)||(55400004-55400046)
chr3 (252-293)||(37143126-37143167)
chr3 (252-289)||(41443220-41443257)
chr3 (253-294)||(41637304-41637345)
chr3 (252-284)||(28700477-28700509)
chr3 (252-292)||(31425539-31425579)
chr3 (252-292)||(31931045-31931085)
chr3 (254-294)||(48346833-48346873)
chr3 (252-292)||(50559238-50559278)
chr3 (252-292)||(52963342-52963382)
[»] chr7 (28 HSPs)
chr7 (18-179)||(36014428-36014592)
chr7 (252-294)||(2008882-2008924)
chr7 (252-294)||(12007210-12007252)
chr7 (252-294)||(33845047-33845089)
chr7 (252-294)||(47448831-47448873)
chr7 (255-294)||(43081914-43081953)
chr7 (252-294)||(13152598-13152639)
chr7 (256-294)||(31445326-31445364)
chr7 (252-294)||(32777731-32777773)
chr7 (252-294)||(34978301-34978343)
chr7 (252-289)||(49069254-49069291)
chr7 (252-292)||(23910277-23910317)
chr7 (251-294)||(15325662-15325704)
chr7 (255-294)||(27568025-27568064)
chr7 (252-294)||(9792771-9792813)
chr7 (252-294)||(10700210-10700252)
chr7 (252-294)||(30941391-30941432)
chr7 (252-294)||(37899328-37899370)
chr7 (252-294)||(38259068-38259110)
chr7 (252-294)||(41018668-41018710)
chr7 (252-294)||(41893920-41893962)
chr7 (252-294)||(43159599-43159641)
chr7 (252-294)||(44649350-44649392)
chr7 (252-294)||(44895597-44895638)
chr7 (252-286)||(48395253-48395287)
chr7 (252-285)||(28109962-28109995)
chr7 (252-289)||(37352115-37352152)
chr7 (252-292)||(22623393-22623433)
[»] chr8 (41 HSPs)
chr8 (252-294)||(1068611-1068653)
chr8 (252-292)||(34435763-34435803)
chr8 (252-294)||(2730985-2731027)
chr8 (252-294)||(26026901-26026943)
chr8 (252-294)||(33107891-33107933)
chr8 (252-292)||(5601013-5601053)
chr8 (252-292)||(5639567-5639607)
chr8 (252-294)||(5771996-5772038)
chr8 (252-290)||(7598713-7598751)
chr8 (252-294)||(10839506-10839548)
chr8 (252-294)||(25987811-25987853)
chr8 (252-294)||(44061722-44061764)
chr8 (254-294)||(33451587-33451627)
chr8 (255-294)||(7612231-7612270)
chr8 (252-294)||(3547184-3547226)
chr8 (252-294)||(3946245-3946287)
chr8 (252-294)||(4658287-4658329)
chr8 (252-294)||(5771900-5771942)
chr8 (252-294)||(12284294-12284336)
chr8 (252-294)||(13106482-13106524)
chr8 (252-294)||(15717000-15717042)
chr8 (252-294)||(23754731-23754773)
chr8 (252-286)||(26629142-26629176)
chr8 (252-294)||(27325763-27325804)
chr8 (252-294)||(28772148-28772190)
chr8 (252-286)||(30170761-30170795)
chr8 (252-294)||(33100493-33100535)
chr8 (252-285)||(5740807-5740840)
chr8 (252-289)||(5849595-5849632)
chr8 (252-293)||(20284844-20284885)
chr8 (252-293)||(21071473-21071514)
chr8 (252-284)||(895939-895971)
chr8 (254-286)||(4671998-4672030)
chr8 (252-284)||(7678737-7678769)
chr8 (252-284)||(9047093-9047125)
chr8 (252-292)||(9549225-9549265)
chr8 (252-292)||(22719445-22719484)
chr8 (252-292)||(24479241-24479280)
chr8 (252-292)||(31249551-31249590)
chr8 (252-292)||(37792189-37792229)
chr8 (252-284)||(39211058-39211090)
[»] chr6 (22 HSPs)
chr6 (252-294)||(33712325-33712367)
chr6 (252-294)||(18065114-18065156)
chr6 (252-294)||(24900780-24900822)
chr6 (252-294)||(5080592-5080633)
chr6 (252-294)||(8505798-8505840)
chr6 (252-294)||(8645314-8645355)
chr6 (252-294)||(11635559-11635601)
chr6 (252-294)||(17551403-17551445)
chr6 (252-294)||(31883328-31883370)
chr6 (252-292)||(14910182-14910222)
chr6 (252-291)||(23632664-23632703)
chr6 (252-294)||(2242046-2242088)
chr6 (252-294)||(8098620-8098661)
chr6 (252-286)||(13093631-13093665)
chr6 (252-294)||(20822892-20822934)
chr6 (252-294)||(22079588-22079629)
chr6 (252-294)||(25811863-25811904)
chr6 (252-294)||(28982663-28982705)
chr6 (252-294)||(32459541-32459583)
chr6 (252-294)||(34047392-34047433)
chr6 (253-294)||(5739788-5739829)
chr6 (252-285)||(31517202-31517235)
[»] chr4 (29 HSPs)
chr4 (252-294)||(5932788-5932830)
chr4 (252-294)||(32012901-32012943)
chr4 (252-294)||(51255751-51255793)
chr4 (259-294)||(36130377-36130412)
chr4 (256-294)||(37060326-37060364)
chr4 (252-294)||(38519798-38519840)
chr4 (252-294)||(50721769-50721811)
chr4 (252-294)||(50831780-50831822)
chr4 (252-294)||(51734657-51734699)
chr4 (252-293)||(21014059-21014100)
chr4 (252-285)||(44925163-44925196)
chr4 (252-292)||(14443203-14443243)
chr4 (255-294)||(51577622-51577661)
chr4 (252-294)||(149509-149551)
chr4 (252-294)||(2401615-2401657)
chr4 (252-294)||(5622463-5622504)
chr4 (252-294)||(23369357-23369398)
chr4 (252-294)||(29227267-29227309)
chr4 (252-294)||(37997261-37997302)
chr4 (252-294)||(54000703-54000745)
chr4 (252-286)||(56215610-56215644)
chr4 (252-289)||(7632491-7632528)
chr4 (252-289)||(45082986-45083022)
chr4 (252-284)||(5386389-5386421)
chr4 (252-292)||(18938402-18938442)
chr4 (252-292)||(37297054-37297093)
chr4 (252-284)||(42490925-42490957)
chr4 (252-284)||(48494935-48494967)
chr4 (252-292)||(56557738-56557778)
[»] chr1 (40 HSPs)
chr1 (252-294)||(27742622-27742664)
chr1 (252-294)||(48858828-48858870)
chr1 (252-294)||(9566985-9567027)
chr1 (252-294)||(9987956-9987998)
chr1 (252-294)||(19947765-19947807)
chr1 (252-294)||(24806246-24806288)
chr1 (252-294)||(48983692-48983734)
chr1 (255-294)||(17082767-17082806)
chr1 (252-294)||(649773-649815)
chr1 (252-294)||(4213077-4213119)
chr1 (252-294)||(47642631-47642673)
chr1 (254-292)||(50148953-50148991)
chr1 (252-293)||(48261144-48261185)
chr1 (252-292)||(15083077-15083116)
chr1 (252-294)||(2571640-2571681)
chr1 (252-294)||(3159381-3159422)
chr1 (252-294)||(5771772-5771814)
chr1 (252-294)||(8350221-8350262)
chr1 (252-294)||(9897586-9897628)
chr1 (252-294)||(10890070-10890112)
chr1 (252-294)||(11947800-11947842)
chr1 (252-294)||(13489667-13489709)
chr1 (252-294)||(15705086-15705128)
chr1 (252-294)||(30467550-30467592)
chr1 (252-294)||(30735318-30735359)
chr1 (252-294)||(35529404-35529446)
chr1 (252-294)||(37685336-37685377)
chr1 (252-294)||(37700141-37700182)
chr1 (252-294)||(40439864-40439906)
chr1 (252-294)||(52362487-52362529)
chr1 (252-293)||(18982524-18982565)
chr1 (252-284)||(4857927-4857959)
chr1 (252-292)||(12798552-12798592)
chr1 (252-292)||(30570532-30570572)
chr1 (254-294)||(31826957-31826997)
chr1 (253-293)||(36775112-36775152)
chr1 (252-284)||(45272183-45272215)
chr1 (252-288)||(45333361-45333397)
chr1 (252-292)||(49020430-49020470)
chr1 (252-284)||(51571420-51571452)
[»] chr2 (28 HSPs)
chr2 (252-292)||(37731226-37731266)
chr2 (252-294)||(15260312-15260354)
chr2 (256-294)||(37316839-37316877)
chr2 (252-294)||(43057069-43057111)
chr2 (252-293)||(45376246-45376287)
chr2 (252-291)||(11965798-11965837)
chr2 (252-294)||(8848720-8848761)
chr2 (252-294)||(27490755-27490796)
chr2 (252-292)||(38821371-38821411)
chr2 (252-291)||(14871852-14871891)
chr2 (252-294)||(2563709-2563751)
chr2 (252-294)||(6999092-6999134)
chr2 (252-294)||(7502452-7502494)
chr2 (252-294)||(13765405-13765447)
chr2 (252-294)||(14876962-14877004)
chr2 (252-294)||(18254234-18254275)
chr2 (252-294)||(19916660-19916702)
chr2 (252-294)||(22526018-22526060)
chr2 (252-294)||(22888846-22888887)
chr2 (252-294)||(23690534-23690576)
chr2 (252-286)||(24727622-24727656)
chr2 (252-286)||(25507260-25507294)
chr2 (252-294)||(31922317-31922359)
chr2 (252-294)||(41042259-41042300)
chr2 (253-294)||(2144725-2144766)
chr2 (252-293)||(9979101-9979142)
chr2 (252-292)||(14233745-14233785)
chr2 (252-292)||(40504229-40504269)
[»] scaffold0128 (1 HSPs)
scaffold0128 (252-294)||(10941-10983)
[»] scaffold0110 (1 HSPs)
scaffold0110 (252-294)||(28351-28393)
[»] chr5 (25 HSPs)
chr5 (252-294)||(13089806-13089848)
chr5 (252-291)||(21155992-21156031)
chr5 (252-294)||(611869-611911)
chr5 (252-294)||(1274363-1274404)
chr5 (252-293)||(4719655-4719696)
chr5 (252-292)||(17097828-17097868)
chr5 (252-292)||(18660764-18660803)
chr5 (252-284)||(21210835-21210867)
chr5 (252-292)||(32872924-32872964)
chr5 (252-294)||(1293110-1293152)
chr5 (252-294)||(6517717-6517759)
chr5 (252-294)||(7287214-7287256)
chr5 (252-286)||(8728613-8728647)
chr5 (252-294)||(8920083-8920125)
chr5 (252-294)||(10649440-10649482)
chr5 (252-294)||(13739455-13739497)
chr5 (252-294)||(16594400-16594442)
chr5 (252-294)||(19522028-19522069)
chr5 (252-294)||(28306157-28306198)
chr5 (252-294)||(29462998-29463040)
chr5 (252-294)||(39195722-39195764)
chr5 (252-286)||(41621960-41621994)
chr5 (252-286)||(43057440-43057474)
chr5 (252-293)||(11148516-11148557)
chr5 (252-292)||(27487892-27487932)
[»] scaffold0034 (1 HSPs)
scaffold0034 (252-294)||(101930-101972)
[»] scaffold0432 (1 HSPs)
scaffold0432 (252-294)||(6544-6586)


Alignment Details
Target: chr3 (Bit Score: 156; Significance: 7e-83; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 13609528 - 13609322
Alignment:
Q  18 ggaggtttcatcaatggagtgtgattccaagacgagaccacactccgaacagattgcatcaccagcggagcggtcaaacaccacctccgtcgctcgcttg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609528 ggaggtttcatcaatggagtgtgattccaagacgagaccacactccgaacagattgcatcaccagcggagcggtcaaacaccacctccgtcgctcgcttg 13609429  T
Q  118 cagtcactgcaaaacgcgtcggacatggttccgagttt-tctctctagggtttcaagaagaaaatgagttttttgctcaaagaacaagagaataaactat 216  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||           |||||||| ||||||||||||||| ||||||    
T  13609428 cagtcactgcaaaatgcgtcggacatggttccgagtttctctctctagggtttcaaga-----------tttttgctgaaagaacaagagaatgaactat 13609340  T
Q  217 gttatatattgctctcaa 234  Q
    ||||| ||||||||||||    
T  13609339 gttatttattgctctcaa 13609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 14150125 - 14149906
Alignment:
Q  18 ggaggtttcatcaatggagtgtgattccaagacgagaccacactccgaacagattgcatcaccagcggagcggtcaaacaccacctccgtcgctcgcttg 117  Q
    |||||||||||| |||||||| ||| ||||||| ||||||||||| ||||||| |||||  || |||||| ||||||||||||| |||||||||||||||    
T  14150125 ggaggtttcatcgatggagtgagatcccaagacaagaccacactctgaacagactgcattgccggcggagtggtcaaacaccacatccgtcgctcgcttg 14150026  T
Q  118 cagtcactgcaaaacgcgtcggacatggttccgagttt-tctctctagggtttcaagaagaaaatga-----gttttttgctcaaagaacaagagaataa 211  Q
    ||||| ||||||||||| ||||||||||||| |||||| | |||||  |||||||||||||||||||      ||||||||| ||||||||||||||| |    
T  14150025 cagtcgctgcaaaacgcatcggacatggttctgagtttctgtctcttaggtttcaagaagaaaatgattttttttttttgctgaaagaacaagagaatga 14149926  T
Q  212 actatgttatatattgctct 231  Q
    |||||| |||||| ||||||    
T  14149925 actatgctatataatgctct 14149906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 14074600 - 14074406
Alignment:
Q  18 ggaggtttcatcaatggagtgtgattccaagacgagaccacactccgaacagattgcatcaccagcggagcggtcaaacaccacctccgtcgctcgcttg 117  Q
    |||||||||||| |||||||| ||| ||||||| ||||||||||| ||||||| |||||  || |||||| ||||||||||||| ||||||||| | |||    
T  14074600 ggaggtttcatcgatggagtgagatcccaagacaagaccacactctgaacagactgcattgccggcggagtggtcaaacaccacatccgtcgcttggttg 14074501  T
Q  118 cagtcactgcaaaacgcgtcggacatggttccgagttttctctctagggtttcaagaagaaaatgagttttttgctcaaagaacaagagaataaactatg 217  Q
    ||||| ||||||||||| ||  ||||||||||||| ||||||              |||||||||| ||||||||| ||||||||||||||| |||||||    
T  14074500 cagtctctgcaaaacgcatcaaacatggttccgag-tttctc--------------aagaaaatgacttttttgctgaaagaacaagagaatgaactatg 14074416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 9862538 - 9862580
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  9862538 atgatatttgaacaaccattttttgtcaacttttgtgacaact 9862580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 10811140 - 10811182
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  10811140 atgatatttgaacaaccattttatgacaacttttgtgacaact 10811182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 19961937 - 19961979
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  19961937 atgatatttgaacaaccacttttagacaatttttgtgacaact 19961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 32362938 - 32362980
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  32362938 atgatatttgaacaaccattttttgacaacttttatgacaact 32362980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 34456795 - 34456837
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  34456795 atgatatttgaataaccactttttgacaacttttgtgataact 34456837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 23553655 - 23553613
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||| ||||||  ||||||||||||||||||    
T  23553655 atgatatttgaacaactacttttaaacaacttttgtgacaact 23553613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 26014817 - 26014858
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  26014817 atgatatttgaacaacca-ttttttacaacttttgtgacaact 26014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 32146052 - 32146010
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||| | ||||||||||||||||||| ||||    
T  32146052 atgatatttgaacaactattttttgacaacttttgtgataact 32146010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 32457821 - 32457780
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  32457821 atgatatttgtacaaccactttttgacaac-tttgtgacaact 32457780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 33389013 - 33389055
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||  |||| |||||||||||||    
T  33389013 atgatatttgaacaaccacttttaaacaatttttgtgacaact 33389055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 42357146 - 42357105
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  42357146 atgatatttgaacaaccatttttt-acaacttttgtgacaact 42357105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 46623912 - 46623953
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  46623912 atgatatttgaacaacca-ttttttacaacttttgtgacaact 46623953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 47472334 - 47472375
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47472334 atgatatttgaacaacca-ttttttacaacttttgtgacaact 47472375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 52939658 - 52939699
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  52939658 atgatatttgaacaacca-ttttttacaacttttgtgacaact 52939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 55400004 - 55400046
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  55400004 atgatatttgaacatccattttatgacaacttttgtgacaact 55400046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 37143126 - 37143167
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  37143126 atgatatttgaacatccattttttaacaacttttgtgacaac 37143167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 41443257 - 41443220
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtga 289  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  41443257 atgatatttgaacgatcactttttgacaacttttgtga 41443220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 41637345 - 41637304
Alignment:
Q  253 tgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||| ||||| | ||||||||||||||||||||||||    
T  41637345 tgatatttgtacaactattttttgacaacttttgtgacaact 41637304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 28700477 - 28700509
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||||||||||| ||||||||||||||    
T  28700477 atgatatttgaacaaccattttttgacaacttt 28700509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 31425539 - 31425579
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||| ||| ||||| ||||||||||||||||    
T  31425539 atgatatttgaacatccattttttaacaacttttgtgacaa 31425579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 31931085 - 31931045
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||| ||| ||||| ||||||||||||||||    
T  31931085 atgatatttgaacatccattttttaacaacttttgtgacaa 31931045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 48346833 - 48346873
Alignment:
Q  254 gatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||| || ||||||||||| ||||||||||||    
T  48346833 gatatttgaacaatcattttttgacaacgtttgtgacaact 48346873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 50559278 - 50559238
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||| ||||| | ||||||||||||||||||||||    
T  50559278 atgatatttgtacaactattttttgacaacttttgtgacaa 50559238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 52963382 - 52963342
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||| ||||||| ||||| ||||||||||||||||    
T  52963382 atgatatttgtacaaccattttttaacaacttttgtgacaa 52963342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 36014428 - 36014592
Alignment:
Q  18 ggaggtttcatcaatggagtgtgattccaagacgagaccacactccgaacagattgcatcaccagcggagcggtcaaacaccacctccgtcgctcgcttg 117  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||| || |||||| |||| ||||||||||||||||||||||||    
T  36014428 ggaggtttcatcgatggagtgagattccaagacgagaccacactccgaacagactgcatcgccggcggagtggtcgaacaccacctccgtcgctcgcttg 36014527  T
Q  118 cagtcactgcaaaacgcgtcggacatggttccgagttt---tctctctagggtttcaagaagaaa 179  Q
    ||||| ||||||||||| ||||||||||||||||||||   ||||||||||||||||||||||||    
T  36014528 cagtcgctgcaaaacgcatcggacatggttccgagtttttctctctctagggtttcaagaagaaa 36014592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 2008924 - 2008882
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2008924 atgatatttgaacaaccactttttgacaacttttgtgacaact 2008882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 12007252 - 12007210
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  12007252 atgatatttgaacaaccattttttgacaacttttgtgacaact 12007210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 33845047 - 33845089
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  33845047 atgatatttgaataaccactttttgacaacttttgtgacaact 33845089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 47448831 - 47448873
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  47448831 atgatatttgaacaaccattttttgacaacttttgtgacaact 47448873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 43081953 - 43081914
Alignment:
Q  255 atatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  43081953 atatttgaacaaccactttttgacaacttttatgacaact 43081914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 13152598 - 13152639
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  13152598 atgatatttgaacaacca-tttttgacaacttttgtgacaact 13152639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 31445326 - 31445364
Alignment:
Q  256 tatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  31445326 tatttgaacaaccattttttgacaacttttgtgacaact 31445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 32777773 - 32777731
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  32777773 atgatatttgaacaaccattttttgacaacttttatgacaact 32777731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 34978301 - 34978343
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  34978301 atgatatttgaacaatcactttttgacaatttttgtgacaact 34978343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 49069254 - 49069291
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtga 289  Q
    |||||||||| |||||||||||||||||||||||||||    
T  49069254 atgatatttgtacaaccactttttgacaacttttgtga 49069291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 23910317 - 23910277
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  23910317 atgatatttgtacaaccattttttgacaacttttgtgacaa 23910277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 15325704 - 15325662
Alignment:
Q  251 tatgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  15325704 tatgatatttgaacaatca-tttttgacaacttttgtgacaact 15325662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 27568025 - 27568064
Alignment:
Q  255 atatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  27568025 atatttgcacaacaactttttgacaacttttgtgacaact 27568064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 9792771 - 9792813
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||  ||||||||||||| ||||    
T  9792771 atgatatttgaacaaccacttttaaacaacttttgtgataact 9792813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 10700252 - 10700210
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||    
T  10700252 atgatatttgcacaaccactttttgataacttttgtaacaact 10700210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 30941391 - 30941432
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  30941391 atgatatttgaacaacca-ttttttacaacttttgtgacaact 30941432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 37899328 - 37899370
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  37899328 atgatatttgaacatccattttgtgacaacttttgtgacaact 37899370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 38259068 - 38259110
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||    
T  38259068 atgatatttgtacaaccattttttgataacttttgtgacaact 38259110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 41018668 - 41018710
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||| | |||| |||||||||||||||||||    
T  41018668 atgatatttgaacaactatttttggacaacttttgtgacaact 41018710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 41893920 - 41893962
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  41893920 atgatatttgaacatccattttatgacaacttttgtgacaact 41893962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 43159641 - 43159599
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| |||| |||||||||||||    
T  43159641 atgatatttgaacaaccattttttaacaatttttgtgacaact 43159599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 44649392 - 44649350
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| |||||||||| |||| ||||||||    
T  44649392 atgatatttgaacaaccaatttttgacaatttttatgacaact 44649350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 44895638 - 44895597
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  44895638 atgatatttgaacaaccatttttt-acaacttttgtgacaact 44895597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 48395253 - 48395287
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  48395253 atgatatttgtacaaccactttttgacaacttttg 48395287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 28109962 - 28109995
Alignment:
Q  252 atgatatttgaacaaccactttttgacaactttt 285  Q
    |||||||||| |||||||||||||||||||||||    
T  28109962 atgatatttgtacaaccactttttgacaactttt 28109995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 37352115 - 37352152
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtga 289  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  37352115 atgatatttgaacaaccattttttgacaatttttgtga 37352152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 22623393 - 22623433
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||||| |||||||| |||||    
T  22623393 atgatatttgaacaaccattttttgataacttttgcgacaa 22623433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 1068611 - 1068653
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1068611 atgatatttgaacaaccactttttgacaacttttgtgacaact 1068653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 34435803 - 34435763
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34435803 atgatatttgaacaaccactttttgacaacttttgtgacaa 34435763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 2731027 - 2730985
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  2731027 atgatatttgaacaaccactttttgacaacttttgtaacaact 2730985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 26026901 - 26026943
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  26026901 atgatatttgaacaaccattttttgacaacttttgtgacaact 26026943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 33107933 - 33107891
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  33107933 atgatatttgaacaaccactttttgacaacttttatgacaact 33107891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 5601053 - 5601013
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  5601053 atgatatttgaacaaccattttttgacaacttttgtgacaa 5601013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 5639567 - 5639607
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  5639567 atgatatttgaacaaccattttttgacaacttttgtgacaa 5639607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 5772038 - 5771996
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  5772038 atgatatttgaacaaccattttttgacaacttttgtaacaact 5771996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 7598713 - 7598751
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgac 290  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7598713 atgatatttgaacaaccattttttgacaacttttgtgac 7598751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 10839548 - 10839506
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  10839548 atgatatttgaacaaccaatttttaacaacttttgtgacaact 10839506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 25987853 - 25987811
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  25987853 atgatatttgaacaaccatttttttacaacttttgtgacaact 25987811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 44061722 - 44061764
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  44061722 atgatatttgaacaaccattttttgataacttttgtgacaact 44061764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 33451627 - 33451587
Alignment:
Q  254 gatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  33451627 gatatttgaacaatcattttttgacaacttttgtgacaact 33451587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 7612270 - 7612231
Alignment:
Q  255 atatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  7612270 atatttgaacaaccacttttagacaacttttgtgataact 7612231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 3547226 - 3547184
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||    
T  3547226 atgatatttgtacaaccactttttgataacttttgtcacaact 3547184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 3946245 - 3946287
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  3946245 atgatatttgaacatccattttgtgacaacttttgtgacaact 3946287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 4658329 - 4658287
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  4658329 atgatatttgaacatccattttatgacaacttttgtgacaact 4658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 5771942 - 5771900
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||    
T  5771942 atgatatttgaacaaccattttgtgacaacttttgtaacaact 5771900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 12284336 - 12284294
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| |||| |||||| ||||||||||||    
T  12284336 atgatatttgaacaaccatttttggacaacgtttgtgacaact 12284294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 13106482 - 13106524
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| |||| |||||||||| ||||||||    
T  13106482 atgatatttgaacaaccatttttggacaacttttttgacaact 13106524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 15717042 - 15717000
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||| || |||||||||| ||||||||||||||||    
T  15717042 atgatatttgaataatcactttttgataacttttgtgacaact 15717000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 23754773 - 23754731
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| | ||||||||||||||||    
T  23754773 atgatatttgaacaaccattttttaataacttttgtgacaact 23754731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Complemental strand, 26629176 - 26629142
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  26629176 atgatatttgtacaaccactttttgacaacttttg 26629142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 27325763 - 27325804
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  27325763 atgatatttgaacaacca-ttttttacaacttttgtgacaact 27325804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 28772190 - 28772148
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| |||||||||| |||||||| ||||    
T  28772190 atgatatttgaacaaccattttttgacaatttttgtgataact 28772148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Complemental strand, 30170795 - 30170761
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  30170795 atgatatttgtacaaccactttttgacaacttttg 30170761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 33100535 - 33100493
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||| | ||||||||||||||||||    
T  33100535 atgatatttgaacaaccattttataacaacttttgtgacaact 33100493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 5740840 - 5740807
Alignment:
Q  252 atgatatttgaacaaccactttttgacaactttt 285  Q
    |||||||||| |||||||||||||||||||||||    
T  5740840 atgatatttgtacaaccactttttgacaactttt 5740807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 5849632 - 5849595
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtga 289  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  5849632 atgatatttgaacaaccattttttgataacttttgtga 5849595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 20284885 - 20284844
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  20284885 atgatatttgaacaaccatttgatgacaacttttgtgacaac 20284844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 21071514 - 21071473
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  21071514 atgatatttgaacaaccatttgatgacaacttttgtgacaac 21071473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 895939 - 895971
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||| ||||||||||||||||||||||    
T  895939 atgatatttgtacaaccactttttgacaacttt 895971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 286
Target Start/End: Original strand, 4671998 - 4672030
Alignment:
Q  254 gatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||||||||| ||||||||||||||||    
T  4671998 gatatttgaacaaccattttttgacaacttttg 4672030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 7678737 - 7678769
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||| ||||||||||||||||||||||    
T  7678737 atgatatttgtacaaccactttttgacaacttt 7678769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 9047125 - 9047093
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||| ||||||||||||||||||||||    
T  9047125 atgatatttgtacaaccactttttgacaacttt 9047093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 9549265 - 9549225
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  9549265 atgatatttgaacatccattttgtgacaacttttgtgacaa 9549225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 22719445 - 22719484
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  22719445 atgatatttgaacaacca-ttttttacaacttttgtgacaa 22719484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 24479241 - 24479280
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  24479241 atgatatttgaacaacca-tttttgataacttttgtgacaa 24479280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 31249590 - 31249551
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  31249590 atgatatttgaacaacca-ttttttacaacttttgtgacaa 31249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 37792229 - 37792189
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    ||||||||||||||||||||||| || || |||||||||||    
T  37792229 atgatatttgaacaaccacttttagataatttttgtgacaa 37792189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 39211058 - 39211090
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||||||||||| ||||||||||||||    
T  39211058 atgatatttgaacaaccattttttgacaacttt 39211090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 33712325 - 33712367
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33712325 atgatatttgaacaaccactttttgacaacttttgtgacaact 33712367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 18065156 - 18065114
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  18065156 atgatatttgaacaatcactttttgacaacttttgtgacaact 18065114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 24900780 - 24900822
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  24900780 atgatatttgaacaaccattttttgacaacttttgtgacaact 24900822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 5080633 - 5080592
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  5080633 atgatatttgaacaaccacttttt-acaacttttgtgacaact 5080592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 8505840 - 8505798
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  8505840 atgatatttgaacaatcattttttgacaacttttgtgacaact 8505798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 8645314 - 8645355
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  8645314 atgatatttgaacaac-actttttgacaacttttgtgacaact 8645355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 11635601 - 11635559
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  11635601 atgatatttgaacaatcattttttgacaacttttgtgacaact 11635559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 17551445 - 17551403
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  17551445 atgatatttgaacaaccattttttgacaacttttgtaacaact 17551403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 31883370 - 31883328
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  31883370 atgatatttgtacaaccactttttgacaacttttgtaacaact 31883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 14910182 - 14910222
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  14910182 atgacatttgaacaaacactttttgacaacttttgtgacaa 14910222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 23632703 - 23632664
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgaca 291  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  23632703 atgatatttgaacaaccacttttaaacaacttttgtgaca 23632664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 2242088 - 2242046
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| || |||||||||| |||||||||||||    
T  2242088 atgatatttgaacaatcattttttgacaatttttgtgacaact 2242046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 8098661 - 8098620
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  8098661 atgatatttgaacaaccatttttt-acaacttttgtgacaact 8098620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 13093631 - 13093665
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  13093631 atgatatttgtacaaccactttttgacaacttttg 13093665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 20822934 - 20822892
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  20822934 atgatatttgaacatccattttatgacaacttttgtgacaact 20822892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 22079629 - 22079588
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  22079629 atgatatttgaacaaccatttttt-acaacttttgtgacaact 22079588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 25811904 - 25811863
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  25811904 atgatatttgaacaaccatttttt-acaacttttgtgacaact 25811863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 28982705 - 28982663
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||    
T  28982705 atgatatttgaacatccattttttaacaacttttgtgacaact 28982663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 32459583 - 32459541
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  32459583 atgatatttgaacatccattttatgacaacttttgtgacaact 32459541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 34047392 - 34047433
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  34047392 atgatatttgaacaacca-ttttttacaacttttgtgacaact 34047433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 5739829 - 5739788
Alignment:
Q  253 tgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| | ||||| ||||||||||||||||||    
T  5739829 tgatatttgaacaactattttttaacaacttttgtgacaact 5739788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 31517235 - 31517202
Alignment:
Q  252 atgatatttgaacaaccactttttgacaactttt 285  Q
    |||||||||| |||||||||||||||||||||||    
T  31517235 atgatatttgtacaaccactttttgacaactttt 31517202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 5932830 - 5932788
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5932830 atgatatttgaacaaccactttttgacaacttttgtgacaact 5932788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 32012901 - 32012943
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  32012901 atgatatttgaacaaccaatttttgacaacttttgtgacaact 32012943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 51255751 - 51255793
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  51255751 atgatatttgaacaaccattttttgacaacttttgtgacaact 51255793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 294
Target Start/End: Complemental strand, 36130412 - 36130377
Alignment:
Q  259 ttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||||||||||||||||||||||||    
T  36130412 ttgaacaaccactttttgacaacttttgtgacaact 36130377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 37060326 - 37060364
Alignment:
Q  256 tatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  37060326 tatttgaacaaccattttttgacaacttttgtgacaact 37060364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 38519798 - 38519840
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  38519798 atgatatttgaacaaccattttttgacaatttttgtgacaact 38519840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 50721811 - 50721769
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  50721811 atgatatttgaacaaccaatttttgacaacttttgtgataact 50721769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 50831822 - 50831780
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  50831822 atgatatttgtacaaccactttttgacaacttttgtaacaact 50831780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 51734699 - 51734657
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  51734699 atgatatttgaacaaccacttttaaacaacttttgtgacaact 51734657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 21014059 - 21014100
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  21014059 atgatatttgaacaatcattttttgacaacttttgtgacaac 21014100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 44925196 - 44925163
Alignment:
Q  252 atgatatttgaacaaccactttttgacaactttt 285  Q
    ||||||||||||||||||||||||||||||||||    
T  44925196 atgatatttgaacaaccactttttgacaactttt 44925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 14443203 - 14443243
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  14443203 atgatatttgaacaatcattttttgacaacttttgtgacaa 14443243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 51577622 - 51577661
Alignment:
Q  255 atatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  51577622 atatttgaacaatcactttttgataacttttgtgacaact 51577661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 149551 - 149509
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| |||||||||| || |||||||||||||    
T  149551 atgatatttgaacaatcactttttgataatttttgtgacaact 149509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 2401615 - 2401657
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  2401615 atgatatttgaacatccattttgtgacaacttttgtgacaact 2401657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 5622463 - 5622504
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  5622463 atgatatttgaacaacca-ttttttacaacttttgtgacaact 5622504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 23369398 - 23369357
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  23369398 atgatatttgaacaaccatttttt-acaacttttgtgacaact 23369357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 29227309 - 29227267
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||| || |||||||| ||||    
T  29227309 atgatatttgaacaaccactttttgataatttttgtgataact 29227267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 37997261 - 37997302
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  37997261 atgatatttgaacaacca-ttttttacaacttttgtgacaact 37997302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 54000703 - 54000745
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||||||||||||||||| |||| | ||||||    
T  54000703 atgatatttgaacaaccactttttgacaatttttataacaact 54000745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 56215610 - 56215644
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  56215610 atgatatttgtacaaccactttttgacaacttttg 56215644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 7632528 - 7632491
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtga 289  Q
    ||||||||||||||| || |||||||||||||||||||    
T  7632528 atgatatttgaacaatcaatttttgacaacttttgtga 7632491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 45082986 - 45083022
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtga 289  Q
    |||||||||||||||||| |||||||||||||||||||    
T  45082986 atgatatttgaacaacca-tttttgacaacttttgtga 45083022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 5386389 - 5386421
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||||||||||| ||||||||||||||    
T  5386389 atgatatttgaacaaccattttttgacaacttt 5386421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 18938442 - 18938402
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||| ||||||||||| ||||||    
T  18938442 atgatatttgaacaaccattttatgacaacttttatgacaa 18938402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 37297054 - 37297093
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  37297054 atgatatttgaacaacca-ttttttacaacttttgtgacaa 37297093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 42490925 - 42490957
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||| ||||||||||||||||||||||    
T  42490925 atgatatttgtacaaccactttttgacaacttt 42490957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 48494967 - 48494935
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||||||||||||||||| ||||||||    
T  48494967 atgatatttgaacaaccactttttaacaacttt 48494935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 56557738 - 56557778
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||| | ||| ||||||||||||||||||    
T  56557738 atgatatttgaacaacaattttatgacaacttttgtgacaa 56557778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 27742622 - 27742664
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27742622 atgatatttgaacaaccactttttgacaacttttgtgacaact 27742664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 48858828 - 48858870
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48858828 atgatatttgaacaaccactttttgacaacttttgtgacaact 48858870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 9567027 - 9566985
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  9567027 atgatatttgaacaaccattttttgacaacttttgtgacaact 9566985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 9987956 - 9987998
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  9987956 atgatatttgaacaaccaatttttgacaacttttgtgacaact 9987998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 19947807 - 19947765
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  19947807 atgatatttgaacaaccattttttgacaacttttgtgacaact 19947765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 24806288 - 24806246
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  24806288 atgatatttgaataaccactttttgacaacttttgtgacaact 24806246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 48983734 - 48983692
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  48983734 atgatatttgaacaaccattttttgacaacttttgtgacaact 48983692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 17082806 - 17082767
Alignment:
Q  255 atatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  17082806 atatttgaacaactactttttgacaacttttgtgacaact 17082767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 649773 - 649815
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  649773 atgatatttgaacaaccatttttttacaacttttgtgacaact 649815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 4213077 - 4213119
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  4213077 atgatatttgaacaaccattttttgataacttttgtgacaact 4213119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 47642673 - 47642631
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  47642673 atgatatttgaacaaccattttttgataacttttgtgacaact 47642631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 50148953 - 50148991
Alignment:
Q  254 gatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  50148953 gatatttgaacaaccaatttttgacaacttttgtgacaa 50148991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 48261144 - 48261185
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||| | |||||||||||||||||||||||||||||||    
T  48261144 atgatattcgtacaaccactttttgacaacttttgtgacaac 48261185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 15083116 - 15083077
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  15083116 atgatatttgaacaacca-tttttgacaacttttgtgacaa 15083077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 2571640 - 2571681
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  2571640 atgatatttgaacaacca-ttttttacaacttttgtgacaact 2571681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 3159381 - 3159422
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  3159381 atgatatttgaacaacca-ttttttacaacttttgtgacaact 3159422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 5771814 - 5771772
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| |||||||||| || |||||||||||||    
T  5771814 atgatatttgaacaatcactttttgataatttttgtgacaact 5771772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 8350262 - 8350221
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  8350262 atgatatttgaacaaccatttttt-acaacttttgtgacaact 8350221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 9897628 - 9897586
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| | ||||| ||||||||||||||||||||||||    
T  9897628 atgatatttgtagaaccattttttgacaacttttgtgacaact 9897586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 10890112 - 10890070
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  10890112 atgatatttgaacatccattttatgacaacttttgtgacaact 10890070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 11947800 - 11947842
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||    
T  11947800 atgatatttgtacaaccattttatgacaacttttgtgacaact 11947842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 13489667 - 13489709
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  13489667 atgatatttgaacatccattttatgacaacttttgtgacaact 13489709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 15705128 - 15705086
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  15705128 atgatatttgaacatccattttatgacaacttttgtgacaact 15705086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 30467592 - 30467550
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||  || ||||||||||||||||||||||||    
T  30467592 atgatatttgaacagtcattttttgacaacttttgtgacaact 30467550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 30735359 - 30735318
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  30735359 atgatatttgaacaaccatttttt-acaacttttgtgacaact 30735318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 35529446 - 35529404
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||  |||| |||||||||||||||||||    
T  35529446 atgatatttgaacaaccgattttagacaacttttgtgacaact 35529404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 37685336 - 37685377
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  37685336 atgatatttgaacaacca-ttttttacaacttttgtgacaact 37685377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 37700182 - 37700141
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  37700182 atgatatttgaacaaccatttttt-acaacttttgtgacaact 37700141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 40439906 - 40439864
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||    
T  40439906 atgatacttgaacaaccattttttgacaacttttatgacaact 40439864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 52362487 - 52362529
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  52362487 atgatatttgaacatccattttatgacaacttttgtgacaact 52362529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 18982524 - 18982565
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  18982524 atgatatttgaacatccattttttaacaacttttgtgacaac 18982565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 4857927 - 4857959
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    ||||||||||||||| |||||||||||||||||    
T  4857927 atgatatttgaacaatcactttttgacaacttt 4857959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 12798552 - 12798592
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    ||||||||||||| | |||||||||||||||| ||||||||    
T  12798552 atgatatttgaactatcactttttgacaacttatgtgacaa 12798592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 30570532 - 30570572
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||| ||||||||||||||||||| || |||||||||||    
T  30570532 atgatagttgaacaaccactttttgataaattttgtgacaa 30570572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 31826957 - 31826997
Alignment:
Q  254 gatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||| ||||| |||| |||||||||||||    
T  31826957 gatatttgaacaaccatttttttacaatttttgtgacaact 31826997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 36775112 - 36775152
Alignment:
Q  253 tgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    ||||||||||||| ||| ||||| |||||||||||||||||    
T  36775112 tgatatttgaacatccattttttaacaacttttgtgacaac 36775152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 45272215 - 45272183
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||| ||||||||||||||||||||||    
T  45272215 atgatatttgtacaaccactttttgacaacttt 45272183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 45333361 - 45333397
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtg 288  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  45333361 atgatatttgtacaaccactttttgataacttttgtg 45333397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 49020470 - 49020430
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||| ||||||| ||||| ||||||||||||||||    
T  49020470 atgatatttgtacaaccattttttaacaacttttgtgacaa 49020430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 51571420 - 51571452
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||| ||||||||||||||||||||||    
T  51571420 atgatatttgtacaaccactttttgacaacttt 51571452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 37731266 - 37731226
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37731266 atgatatttgaacaaccactttttgacaacttttgtgacaa 37731226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 15260312 - 15260354
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  15260312 atgatatttgaacaaccacttttagacaacttttgtgacaact 15260354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 37316877 - 37316839
Alignment:
Q  256 tatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37316877 tatttgaacaaccactttttgacaacttttgtgacaact 37316839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 43057069 - 43057111
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  43057069 atgatatttgaacaaccactttttaacaacttttgtgacaact 43057111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 45376287 - 45376246
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  45376287 atgatatttgtacaaccactttttgacaacttttgtgacaac 45376246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 11965798 - 11965837
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgaca 291  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  11965798 atgatatttgaacaatcactttttgacaacttttgtgaca 11965837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 8848761 - 8848720
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  8848761 atgatatttgaacaacca-tttttgacaacttttgtgacaact 8848720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 27490796 - 27490755
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  27490796 atgatatttgaacaacca-tttttgacaacttttgtgacaact 27490755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 38821371 - 38821411
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  38821371 atgatatttgaacaaccattttatgacaacttttgtgacaa 38821411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 14871852 - 14871891
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgaca 291  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  14871852 atgatatgtgaacaaccattttttgacaacttttgtgaca 14871891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 2563709 - 2563751
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  2563709 atgatatttgaacatccattttatgacaacttttgtgacaact 2563751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 6999134 - 6999092
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  6999134 atgatatttgaacatccattttatgacaacttttgtgacaact 6999092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 7502494 - 7502452
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||| |||||||||| |||||||||||||    
T  7502494 atgatatttgtacaaccattttttgacaatttttgtgacaact 7502452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 13765405 - 13765447
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  13765405 atgatatttgaacatccattttatgacaacttttgtgacaact 13765447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 14876962 - 14877004
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||| |||||||| | ||||||||||||||||||||||||    
T  14876962 atgatatgtgaacaactattttttgacaacttttgtgacaact 14877004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 18254275 - 18254234
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  18254275 atgatatttgaacaaccatttttt-acaacttttgtgacaact 18254234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 19916660 - 19916702
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||| | || |||||||||||||    
T  19916660 atgatatttgaacaaccactttttaataatttttgtgacaact 19916702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 22526060 - 22526018
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| |||||||||| |||||||||||||    
T  22526060 atgatatttgaacatccattttttgacaatttttgtgacaact 22526018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 22888887 - 22888846
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  22888887 atgatatttgaacaacca-tttttgacaatttttgtgacaact 22888846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 23690576 - 23690534
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||| | ||||||||||||||||||||||| ||||||||    
T  23690576 atgatattagtacaaccactttttgacaacttttatgacaact 23690534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Complemental strand, 24727656 - 24727622
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  24727656 atgatatttgtacaaccactttttgacaacttttg 24727622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 25507260 - 25507294
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  25507260 atgatatttgtacaaccactttttgacaacttttg 25507294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 31922359 - 31922317
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||| ||||||||| |||||||||| |||||||||||||    
T  31922359 atgatattcgaacaaccagtttttgacaatttttgtgacaact 31922317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 41042259 - 41042300
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  41042259 atgatatttgaacaacca-tttttaacaacttttgtgacaact 41042300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 2144725 - 2144766
Alignment:
Q  253 tgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||    
T  2144725 tgatatttgaacaaccattttttgacaacgtttgtgataact 2144766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 9979101 - 9979142
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||||| ||||||||||||| |||| ||||||||||||    
T  9979101 atgatatttgtacaaccactttttcacaatttttgtgacaac 9979142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 14233785 - 14233745
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  14233785 atgatatttgaacatccattttgtgacaacttttgtgacaa 14233745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 40504229 - 40504269
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||| |||||||| |||||||||    
T  40504229 atgatatttgaacaaccattttatgacaactgttgtgacaa 40504269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 10941 - 10983
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  10941 atgataattgaacaaccactttttgacaacttttgtgacaact 10983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 28393 - 28351
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  28393 atgatatttgaacaaccactttttgataacttttgtgacaact 28351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 13089848 - 13089806
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  13089848 atgatatttgaacaaccattttttgacaacttttgtgacaact 13089806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 21155992 - 21156031
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgaca 291  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21155992 atgatatttgaacaaccattttttgacaacttttgtgaca 21156031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 611869 - 611911
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  611869 atgatatttgaacaattactttttgacaacttttgtgacaact 611911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 1274363 - 1274404
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  1274363 atgatatttgaacaacca-tttttgacaacttttgtgacaact 1274404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 4719655 - 4719696
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  4719655 atgatatttgtacaaccaatttttgacaacttttgtgacaac 4719696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 17097868 - 17097828
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  17097868 atgatatttgaacaaccattttttgataacttttgtgacaa 17097828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 18660764 - 18660803
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  18660764 atgatatttgaacaacca-tttttgacaacttttgtgacaa 18660803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 21210835 - 21210867
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttt 284  Q
    |||||||||||||||||||||||||||||||||    
T  21210835 atgatatttgaacaaccactttttgacaacttt 21210867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 32872964 - 32872924
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  32872964 atgatatttgaacaactattttttgacaacttttgtgacaa 32872924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 1293152 - 1293110
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||    
T  1293152 atgatatttgtacaaccattttttaacaacttttgtgacaact 1293110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 6517717 - 6517759
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  6517717 atgatatttgaacatccattttatgacaacttttgtgacaact 6517759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 7287256 - 7287214
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||    
T  7287256 atgatatttaaacaaccatttttttacaacttttgtgacaact 7287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Complemental strand, 8728647 - 8728613
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  8728647 atgatatttgtacaaccactttttgacaacttttg 8728613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 8920083 - 8920125
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  8920083 atgatatttgaacatccattttgtgacaacttttgtgacaact 8920125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 10649440 - 10649482
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  10649440 atgatatttgaacatccattttatgacaacttttgtgacaact 10649482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 13739455 - 13739497
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||| |||||||||||||  |||||||||||||||||||    
T  13739455 atgatattcgaacaaccactttcagacaacttttgtgacaact 13739497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 16594442 - 16594400
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||    
T  16594442 atgatatttgaacatccattttttaacaacttttgtgacaact 16594400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 19522069 - 19522028
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  19522069 atgatatttgaacaaccatttttt-acaacttttgtgacaact 19522028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 28306198 - 28306157
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  28306198 atgatatttgaacaaccatttttt-acaacttttgtgacaact 28306157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 29462998 - 29463040
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    |||||||||||||||| | ||||||||||| ||||||||||||    
T  29462998 atgatatttgaacaacaattttttgacaacgtttgtgacaact 29463040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 39195722 - 39195764
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| |||||||||| || |||||||||||||    
T  39195722 atgatatttgaacaatcactttttgataatttttgtgacaact 39195764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Complemental strand, 41621994 - 41621960
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  41621994 atgatatttgtacaaccactttttgacaacttttg 41621960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 43057440 - 43057474
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttg 286  Q
    |||||||||| ||||||||||||||||||||||||    
T  43057440 atgatatttgtacaaccactttttgacaacttttg 43057474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 11148516 - 11148557
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaac 293  Q
    |||||||||| |||| || |||||||||||||||||||||||    
T  11148516 atgatatttgtacaatcaatttttgacaacttttgtgacaac 11148557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 27487892 - 27487932
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaa 292  Q
    ||||||||||||||| || ||||| ||||||||||||||||    
T  27487892 atgatatttgaacaatcaatttttaacaacttttgtgacaa 27487932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 101972 - 101930
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  101972 atgatatctgaacaaccattttttgacaacttttgtgacaact 101930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 6586 - 6544
Alignment:
Q  252 atgatatttgaacaaccactttttgacaacttttgtgacaact 294  Q
    ||||||||||||||| || ||||| ||||||||||||||||||    
T  6586 atgatatttgaacaatcattttttaacaacttttgtgacaact 6544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University