View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2391_high_30 (Length: 277)
Name: NF2391_high_30
Description: NF2391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2391_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 22415035 - 22414766
Alignment:
| Q |
1 |
gcagatagagttgttttgaagaggcctacttctctgattggcttattggcatgaagctaaagcatcattatgt-----tgtttacttccttacccttaaa |
95 |
Q |
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| T |
22415035 |
gcagatagagttgttttgaagaggcctacttctctgattggcttattggcatgaagctaaagcatcattatgtggtgttgtttacttccttacccttaaa |
22414936 |
T |
|
| Q |
96 |
ctcaatcatccaagataagtagaggttcatacgactcttctcgtacacac--atcgnnnnnnnntatacattgaaactcatgacaaaataagtaaaagaa |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |
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| T |
22414935 |
ctcaatcatccaagataagtagaggttcatacgactcttctcgtacacacatatcgaaaaaaaatatacattgaaactcatgacaaaataagtaaaagaa |
22414836 |
T |
|
| Q |
194 |
ctatgcaggataaattcaagtagcaattactttgtcataaccgtgacttttatcatttccattatattct |
263 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22414835 |
ctatgcaagataaattcaagtagcaattactttgtcataaccgtgacttttatcatttccattatattct |
22414766 |
T |
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