View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2391_low_38 (Length: 257)
Name: NF2391_low_38
Description: NF2391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2391_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 47625158 - 47624912
Alignment:
| Q |
1 |
cagtggcatgacatgattttactatagctgtttaagctgctagattattgttgtttagtgtttatatgtctgtgcaaattattcaagttaactctgctgc |
100 |
Q |
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| T |
47625158 |
cagtggcatgacatgattttactatagctgtttaagctgctagattattgttgtttagtgtttatatgtctgtgcaaattattcaagttaactctgctgc |
47625059 |
T |
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| Q |
101 |
ctgcaagttttgctgtggtagacaatgatctaaatatcgttttttggggtattgcaatgtggaaaacaaaacaaactatgtcatgaccatgacatttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47625058 |
ctgcaagttttgctgtggtagacaatgatctaaatatcgttttttggggtattgcaatgtggaaaacaaaacaaactatgtcatgaccatgacatttcat |
47624959 |
T |
|
| Q |
201 |
aactgtactataaagtttcatgcaatggtttatacatgtgctctctg |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47624958 |
aactgtactataaagtttcatgcaatggtttatacatgtgctctctg |
47624912 |
T |
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