View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2391_low_39 (Length: 254)
Name: NF2391_low_39
Description: NF2391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2391_low_39 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 34899524 - 34899761
Alignment:
| Q |
16 |
atctatgaagaagtgtctgctaagacttacaaataattagttggtagctgaatgcagaaaattgaatatcgaaaatgtgtctctaaaaatgttcttagtt |
115 |
Q |
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| T |
34899524 |
atctatgaagaagtgtctgctaagacttacaaataattagttggtagctgaatgcagaaaattgaatatcgaaaatgtgtctctaaaaatgttcttagtt |
34899623 |
T |
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| Q |
116 |
attaggagaacctcaattagtgggtcagttgacatgttccacttggtttttatgcgtaacgtaccacacaagcatatgcaaatgttataataagataggc |
215 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
34899624 |
attaggagaacctcaactagtgggtcagttgacatgttccacttggtttttatgcgtaa-gtaccacacaagcatatgcaaatgttataataagataggc |
34899722 |
T |
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| Q |
216 |
aagagataccaaattatcatattgtcagtgatatcatct |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
34899723 |
aagagataccaaattatcatattgtcagtgatatcatct |
34899761 |
T |
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