View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2391_low_49 (Length: 217)
Name: NF2391_low_49
Description: NF2391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2391_low_49 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 39586463 - 39586679
Alignment:
| Q |
1 |
taattcttgcaagttcaagagatgatcaatcatgttattccccttctccttcttcctcctatgctcatcaatcaaaccctgcaaaaacccatcaaatctt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
39586463 |
taattcttgcaagttcaagagatgatcaatcatgttattccccttctccttcttcctcctatgctcatcaatcaaaccttgcaaaaacccatcaaatctt |
39586562 |
T |
|
| Q |
101 |
cttgcaatccttttcaacttcttttcataaccaccaaaatcgaaccacctcaaaatcccaacaaattcaccaggattactcgaaccacccaacgatacca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39586563 |
cttgcaatccttttcaacttcttttcataaccaccaaaatcaaaccacctcaaaatcccaacaaattcaccaggattactcgaaccacccaacgatacca |
39586662 |
T |
|
| Q |
201 |
tctccttaatcatctcc |
217 |
Q |
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||||||||||||||||| |
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| T |
39586663 |
tctccttaatcatctcc |
39586679 |
T |
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