View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2393-Insertion-3 (Length: 414)
Name: NF2393-Insertion-3
Description: NF2393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2393-Insertion-3 |
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Alignment Details
Target: chr6 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 8 - 413
Target Start/End: Original strand, 15114262 - 15114667
Alignment:
| Q |
8 |
atacatcctattcttactcgacacataaaatatccccggatgctgcaaaatcaccctcttaaacctcgatgctaaacccaaccactcaccaatcatcaaa |
107 |
Q |
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| T |
15114262 |
atacatcctattcttactcgacacataaaatatccccggatgctgcaaaatcaccctcttaaacctcgatgctaaacccaaccactcaccaatcatcaaa |
15114361 |
T |
|
| Q |
108 |
acattatctttctccgtctttttactcaccaagagattcaaaatctcatgtaaaaccccaacaacccacttatccgattcctcactcgaaccactcaaat |
207 |
Q |
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| T |
15114362 |
acattatctttctccgtctttttactcaccaaaagattcaaaatctcatgtaaaaccccaacaacccacttatccgattcctcactcgaaccactcaaat |
15114461 |
T |
|
| Q |
208 |
tcacaccattctcatacggactcacatacctcaaaccattccactccttcacccatttctcatacttcttatccatctcaaaacccgtcgaaaattgcac |
307 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15114462 |
tcaccccattctcatacggactcacatacctcaaaccattccactccttcacccatttctcatacttcttatccatctcaaaacccgtcgaaaattgcac |
15114561 |
T |
|
| Q |
308 |
cggaaaacccaattccttcccttgccctttcgctttatcgtcatatttcttctccaaaaacgacaccgcgtgttgtttactccaacaaaccaattccaaa |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||| |
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| T |
15114562 |
cggaaaacccaattccttcccttgccctttcgctttatcgccatatttcttctccaaaaacgacacagagtgttttttactccaacaaaccagttccaaa |
15114661 |
T |
|
| Q |
408 |
acagca |
413 |
Q |
| |
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| T |
15114662 |
acagca |
15114667 |
T |
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