View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2393-Insertion-5 (Length: 293)

Name: NF2393-Insertion-5
Description: NF2393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2393-Insertion-5
NF2393-Insertion-5
[»] chr1 (1 HSPs)
chr1 (8-293)||(7266924-7267209)


Alignment Details
Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 293
Target Start/End: Original strand, 7266924 - 7267209
Alignment:
Q  8 atcaaaacagtgtataactgatttgcttaaaaggatttgattccaaatactagtttaagttaaagggtcaagtgcagtgcaacgttgtaacatttgttca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7266924 atcaaaacagtgtataactgatttgcttaaaaggatttgattccaaatactagtttaagttaaagggtcaagtgcagtgcaacgttgtaacatttgttca 7267023  T
Q  108 aagactgagattgtaatacatttgttcatgtttatgacaaagtatgaagtgggtaaaatatgtttccttgattttgaatgtaacagacactgcactttta 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7267024 aagactgagattgtaatacatttgttcatgtttatgacaaagtatgaagtgggtaaaatatgtttccttgattttgaatgtaacagacactgcactttta 7267123  T
Q  208 cacacttcattttgaagctaatctttatcacattatctaatttaccatgtcttttatcatattaccatatggtctagtgatattaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7267124 cacacttcattttgaagctaatctttatcacattatctaatttaccatgtcttttatcatattaccatatggtctaatgatattaa 7267209  T

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