View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2393_high_4 (Length: 249)
Name: NF2393_high_4
Description: NF2393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2393_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 34484398 - 34484158
Alignment:
| Q |
1 |
ctagtaagccaaggttaggatgttttcttttgttgtgggtttaaagggatcccttccctccataattcccataattttgttttgttttataaactttgtg |
100 |
Q |
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| T |
34484398 |
ctagtaagccaaggttaggatgttttcttttgttgtgggtttaaagggatcccttccctccataattcccataattttgttttgttttataaactttgtg |
34484299 |
T |
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| Q |
101 |
gtagtgtcacaatgtttgtttgggaattttatatggttactacgcaacaaaaataacaataatacaaatggtttttgtacccaatgaatcataataatac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
34484298 |
gtagtgtcacaatgtttgtttgggaattttatatggttactacgcaacaaaattaacaataatacaaatggtttttgtacccaatgaataataataatac |
34484199 |
T |
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| Q |
201 |
cgaatggtttctgctttggaagtttcttttctgtctgtgct |
241 |
Q |
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|||||||||||||||||||||||||||||||||| |||||| |
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| T |
34484198 |
cgaatggtttctgctttggaagtttcttttctgtttgtgct |
34484158 |
T |
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