View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2394_high_3 (Length: 276)

Name: NF2394_high_3
Description: NF2394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2394_high_3
NF2394_high_3
[»] chr8 (27 HSPs)
chr8 (21-138)||(40006073-40006190)
chr8 (29-138)||(40006124-40006233)
chr8 (29-115)||(40006167-40006253)
chr8 (50-138)||(40005973-40006061)
chr8 (28-107)||(40005994-40006073)
chr8 (51-122)||(17057593-17057664)
chr8 (51-122)||(17590561-17590632)
chr8 (72-122)||(17225647-17225697)
chr8 (21-77)||(17225639-17225695)
chr8 (50-122)||(40005571-40005643)
chr8 (72-122)||(17225825-17225875)
chr8 (72-121)||(17225405-17225454)
chr8 (51-122)||(17057391-17057463)
chr8 (29-77)||(17057595-17057643)
chr8 (21-77)||(17225817-17225873)
chr8 (29-77)||(17590582-17590630)
chr8 (51-122)||(17590762-17590834)
chr8 (50-122)||(40005772-40005844)
chr8 (28-77)||(17225404-17225453)
chr8 (32-77)||(17057393-17057438)
chr8 (32-77)||(17590787-17590832)
chr8 (28-77)||(40005592-40005641)
chr8 (94-138)||(17057620-17057664)
chr8 (94-138)||(17590561-17590605)
chr8 (80-122)||(44508991-44509033)
chr8 (28-77)||(40005793-40005842)
chr8 (45-77)||(44508993-44509025)
[»] chr7 (31 HSPs)
chr7 (51-122)||(13420632-13420703)
chr7 (45-122)||(10564452-10564529)
chr7 (45-122)||(10564643-10564720)
chr7 (51-122)||(4721022-4721093)
chr7 (51-122)||(13420431-13420502)
chr7 (23-77)||(45402673-45402727)
chr7 (23-77)||(10564281-10564335)
chr7 (23-77)||(12283519-12283573)
chr7 (29-77)||(10564479-10564527)
chr7 (29-77)||(10564670-10564718)
chr7 (29-138)||(10564574-10564693)
chr7 (23-69)||(6797196-6797242)
chr7 (52-122)||(10564554-10564624)
chr7 (72-122)||(12283104-12283154)
chr7 (23-77)||(12283410-12283464)
chr7 (29-77)||(4721024-4721072)
chr7 (45-121)||(10564356-10564432)
chr7 (29-138)||(10564383-10564502)
chr7 (29-77)||(13420634-13420682)
chr7 (23-77)||(10563846-10563900)
chr7 (23-77)||(12283098-12283152)
chr7 (72-122)||(45402671-45402721)
chr7 (29-77)||(13420433-13420481)
chr7 (94-138)||(13420659-13420703)
chr7 (23-77)||(6797326-6797380)
chr7 (72-122)||(10564287-10564337)
chr7 (23-77)||(45402811-45402865)
chr7 (72-121)||(12283525-12283574)
chr7 (50-122)||(12283285-12283357)
chr7 (94-138)||(13420458-13420502)
chr7 (50-122)||(45402809-45402881)
[»] chr6 (28 HSPs)
chr6 (48-122)||(15034001-15034075)
chr6 (51-122)||(22038110-22038181)
chr6 (51-120)||(22038313-22038382)
chr6 (72-122)||(28123525-28123575)
chr6 (51-116)||(22038487-22038552)
chr6 (23-77)||(7851545-7851599)
chr6 (23-77)||(18762538-18762592)
chr6 (29-79)||(22038311-22038361)
chr6 (72-122)||(28123326-28123376)
chr6 (29-77)||(22038112-22038160)
chr6 (21-77)||(28123517-28123573)
chr6 (23-77)||(32556555-32556609)
chr6 (72-121)||(28123086-28123135)
chr6 (29-77)||(15034025-15034073)
chr6 (21-77)||(28123318-28123374)
chr6 (91-138)||(15034001-15034048)
chr6 (29-79)||(22038481-22038531)
chr6 (28-77)||(28123085-28123134)
chr6 (50-122)||(18762783-18762855)
chr6 (79-122)||(18762536-18762579)
chr6 (23-77)||(7851410-7851464)
chr6 (80-122)||(7851424-7851466)
chr6 (72-122)||(7851551-7851601)
chr6 (23-77)||(18762429-18762483)
chr6 (23-77)||(18762785-18762839)
chr6 (94-135)||(22038511-22038552)
chr6 (94-138)||(22038137-22038181)
chr6 (94-138)||(22038338-22038382)
[»] scaffold0023 (8 HSPs)
scaffold0023 (51-122)||(126259-126330)
scaffold0023 (51-122)||(126429-126500)
scaffold0023 (51-122)||(128582-128653)
scaffold0023 (29-77)||(126261-126309)
scaffold0023 (29-77)||(126431-126479)
scaffold0023 (29-77)||(128584-128632)
scaffold0023 (94-138)||(126286-126330)
scaffold0023 (94-138)||(126456-126500)
[»] chr3 (22 HSPs)
chr3 (51-122)||(11974903-11974974)
chr3 (51-122)||(11975413-11975484)
chr3 (51-122)||(11975073-11975144)
chr3 (51-122)||(11975243-11975314)
chr3 (23-77)||(32233200-32233254)
chr3 (50-122)||(40219306-40219378)
chr3 (50-122)||(40219507-40219579)
chr3 (50-122)||(40219708-40219780)
chr3 (50-122)||(40219909-40219981)
chr3 (29-77)||(11974924-11974972)
chr3 (29-77)||(11975094-11975142)
chr3 (29-77)||(11975264-11975312)
chr3 (29-77)||(11975434-11975482)
chr3 (72-122)||(32233206-32233256)
chr3 (28-77)||(40219308-40219357)
chr3 (28-77)||(40219509-40219558)
chr3 (28-77)||(40219710-40219759)
chr3 (28-77)||(40219911-40219960)
chr3 (94-138)||(11974903-11974947)
chr3 (94-138)||(11975073-11975117)
chr3 (94-138)||(11975243-11975287)
chr3 (94-138)||(11975413-11975457)
[»] chr2 (51 HSPs)
chr2 (51-122)||(21173671-21173742)
chr2 (51-122)||(27970533-27970604)
chr2 (51-120)||(27970332-27970401)
chr2 (51-120)||(28056837-28056906)
chr2 (51-120)||(30767545-30767614)
chr2 (51-120)||(30771708-30771777)
chr2 (51-122)||(44348261-44348332)
chr2 (51-120)||(44348464-44348533)
chr2 (51-122)||(21173501-21173572)
chr2 (51-122)||(27970162-27970233)
chr2 (51-122)||(28056667-28056738)
chr2 (51-122)||(44350785-44350856)
chr2 (23-77)||(28056209-28056263)
chr2 (51-116)||(44348638-44348703)
chr2 (51-110)||(28057038-28057097)
chr2 (72-122)||(28048269-28048319)
chr2 (29-79)||(44348462-44348512)
chr2 (29-78)||(27970353-27970402)
chr2 (51-120)||(27970703-27970772)
chr2 (29-78)||(28056858-28056907)
chr2 (29-78)||(30767566-30767615)
chr2 (29-78)||(30771729-30771778)
chr2 (29-77)||(21173673-21173721)
chr2 (29-77)||(27970554-27970602)
chr2 (29-77)||(44348263-44348311)
chr2 (72-122)||(28056215-28056265)
chr2 (28-77)||(28048268-28048317)
chr2 (29-77)||(21173503-21173551)
chr2 (29-77)||(44350787-44350835)
chr2 (29-79)||(44348632-44348682)
chr2 (94-138)||(21173698-21173742)
chr2 (29-77)||(27970183-27970231)
chr2 (94-138)||(27970332-27970376)
chr2 (94-138)||(27970533-27970577)
chr2 (31-79)||(27970726-27970774)
chr2 (29-77)||(28056688-28056736)
chr2 (94-138)||(28056837-28056881)
chr2 (94-138)||(28057038-28057082)
chr2 (94-138)||(30767545-30767589)
chr2 (94-138)||(30771708-30771752)
chr2 (51-102)||(27970904-27970955)
chr2 (29-67)||(28057059-28057097)
chr2 (94-135)||(27970904-27970945)
chr2 (94-135)||(44348662-44348703)
chr2 (94-138)||(21173528-21173572)
chr2 (50-122)||(24024563-24024635)
chr2 (94-138)||(27970162-27970206)
chr2 (94-138)||(28056667-28056711)
chr2 (23-79)||(30771422-30771478)
chr2 (94-138)||(44348288-44348332)
chr2 (94-138)||(44348489-44348533)
[»] chr4 (56 HSPs)
chr4 (212-270)||(37509334-37509392)
chr4 (48-122)||(54757688-54757762)
chr4 (51-120)||(808950-809019)
chr4 (51-122)||(809659-809730)
chr4 (51-122)||(810030-810101)
chr4 (48-122)||(54757487-54757561)
chr4 (51-120)||(809862-809931)
chr4 (51-122)||(808747-808818)
chr4 (51-122)||(809118-809189)
chr4 (51-122)||(809489-809560)
chr4 (51-122)||(54754321-54754392)
chr4 (23-77)||(2847913-2847967)
chr4 (23-77)||(20588047-20588101)
chr4 (48-122)||(54756683-54756757)
chr4 (48-122)||(54756884-54756958)
chr4 (48-120)||(54756482-54756554)
chr4 (48-120)||(54757286-54757358)
chr4 (29-79)||(808948-808998)
chr4 (23-73)||(1701131-1701181)
chr4 (29-77)||(808749-808797)
chr4 (29-77)||(809120-809168)
chr4 (29-77)||(809491-809539)
chr4 (29-77)||(809661-809709)
chr4 (29-77)||(810032-810080)
chr4 (51-122)||(809319-809390)
chr4 (79-122)||(9561588-9561631)
chr4 (29-79)||(809860-809910)
chr4 (48-122)||(54757085-54757159)
chr4 (72-122)||(55780323-55780373)
chr4 (72-122)||(55844503-55844553)
chr4 (28-77)||(55780322-55780371)
chr4 (28-77)||(55844502-55844551)
chr4 (72-120)||(810233-810281)
chr4 (29-77)||(54754342-54754390)
chr4 (51-102)||(808597-808648)
chr4 (28-78)||(810232-810282)
chr4 (74-116)||(1701131-1701173)
chr4 (72-122)||(2847911-2847961)
chr4 (23-77)||(9561590-9561644)
chr4 (72-122)||(20588045-20588095)
chr4 (94-138)||(808604-808648)
chr4 (94-138)||(808975-809019)
chr4 (29-77)||(809321-809369)
chr4 (94-138)||(809887-809931)
chr4 (50-122)||(34986297-34986369)
chr4 (29-77)||(54757712-54757760)
chr4 (91-138)||(54757688-54757735)
chr4 (23-77)||(9561067-9561121)
chr4 (23-77)||(34986313-34986367)
chr4 (70-103)||(54756423-54756456)
chr4 (94-138)||(809686-809730)
chr4 (94-138)||(810057-810101)
chr4 (50-122)||(9561203-9561275)
chr4 (45-77)||(54756723-54756755)
chr4 (45-77)||(54756924-54756956)
chr4 (45-77)||(54757527-54757559)
[»] scaffold0534 (5 HSPs)
scaffold0534 (51-122)||(8867-8938)
scaffold0534 (77-122)||(5925-5970)
scaffold0534 (29-77)||(8869-8917)
scaffold0534 (34-77)||(5925-5968)
scaffold0534 (94-138)||(8894-8938)
[»] scaffold0144 (40 HSPs)
scaffold0144 (51-122)||(19684-19755)
scaffold0144 (51-122)||(28798-28869)
scaffold0144 (51-122)||(33396-33467)
scaffold0144 (51-122)||(33906-33977)
scaffold0144 (51-122)||(19514-19585)
scaffold0144 (51-118)||(19854-19921)
scaffold0144 (51-122)||(30944-31015)
scaffold0144 (51-122)||(33566-33637)
scaffold0144 (51-122)||(34076-34147)
scaffold0144 (51-122)||(34246-34317)
scaffold0144 (51-122)||(34416-34487)
scaffold0144 (51-122)||(28628-28699)
scaffold0144 (51-122)||(33736-33807)
scaffold0144 (28-77)||(30964-31013)
scaffold0144 (29-77)||(19705-19753)
scaffold0144 (29-77)||(28819-28867)
scaffold0144 (29-77)||(33398-33446)
scaffold0144 (29-77)||(33908-33956)
scaffold0144 (51-122)||(34586-34657)
scaffold0144 (29-75)||(19875-19921)
scaffold0144 (70-122)||(19363-19415)
scaffold0144 (29-77)||(19535-19583)
scaffold0144 (29-77)||(28649-28697)
scaffold0144 (29-77)||(33568-33616)
scaffold0144 (29-77)||(34078-34126)
scaffold0144 (29-77)||(34248-34296)
scaffold0144 (29-77)||(34418-34466)
scaffold0144 (29-77)||(19365-19413)
scaffold0144 (29-77)||(33738-33786)
scaffold0144 (29-77)||(34588-34636)
scaffold0144 (94-138)||(19514-19558)
scaffold0144 (94-138)||(19684-19728)
scaffold0144 (94-138)||(19854-19898)
scaffold0144 (94-138)||(28798-28842)
scaffold0144 (94-138)||(33423-33467)
scaffold0144 (94-138)||(33593-33637)
scaffold0144 (94-138)||(33763-33807)
scaffold0144 (94-138)||(33933-33977)
scaffold0144 (94-138)||(34273-34317)
scaffold0144 (94-138)||(34443-34487)
[»] chr1 (24 HSPs)
chr1 (51-122)||(37223746-37223817)
chr1 (23-77)||(20481302-20481356)
chr1 (21-77)||(19846069-19846125)
chr1 (51-122)||(37223576-37223647)
chr1 (51-122)||(37223916-37223987)
chr1 (51-122)||(37224086-37224157)
chr1 (72-122)||(19846077-19846127)
chr1 (23-77)||(20372406-20372460)
chr1 (51-122)||(37223236-37223307)
chr1 (72-121)||(19845837-19845886)
chr1 (29-77)||(37223597-37223645)
chr1 (29-77)||(37223767-37223815)
chr1 (29-77)||(37223937-37223985)
chr1 (51-122)||(37223406-37223477)
chr1 (23-77)||(13590676-13590730)
chr1 (72-122)||(20481308-20481358)
chr1 (31-77)||(37223259-37223305)
chr1 (28-77)||(19845836-19845885)
chr1 (29-77)||(37224107-37224155)
chr1 (72-121)||(20372412-20372461)
chr1 (29-77)||(37223427-37223475)
chr1 (74-122)||(13590684-13590732)
chr1 (94-138)||(37223746-37223790)
chr1 (94-138)||(37224086-37224130)
[»] scaffold0558 (7 HSPs)
scaffold0558 (23-77)||(10772-10826)
scaffold0558 (50-122)||(10058-10130)
scaffold0558 (72-122)||(10778-10828)
scaffold0558 (72-122)||(10457-10507)
scaffold0558 (28-77)||(10079-10128)
scaffold0558 (28-77)||(10456-10505)
scaffold0558 (23-77)||(10655-10709)
[»] scaffold0019 (6 HSPs)
scaffold0019 (23-77)||(168668-168722)
scaffold0019 (72-122)||(168674-168724)
scaffold0019 (72-122)||(168345-168395)
scaffold0019 (23-77)||(168533-168587)
scaffold0019 (28-77)||(168344-168393)
scaffold0019 (50-122)||(168517-168589)
[»] chr5 (26 HSPs)
chr5 (48-122)||(30407686-30407760)
chr5 (48-122)||(30407887-30407961)
chr5 (48-122)||(30408089-30408163)
chr5 (48-122)||(30408894-30408968)
chr5 (23-77)||(7183346-7183400)
chr5 (48-122)||(30408291-30408365)
chr5 (48-122)||(30408493-30408567)
chr5 (48-122)||(30408694-30408768)
chr5 (23-77)||(39056255-39056309)
chr5 (23-77)||(33868988-33869042)
chr5 (21-77)||(25192289-25192345)
chr5 (72-122)||(25192287-25192337)
chr5 (72-122)||(7183352-7183402)
chr5 (72-122)||(39056253-39056303)
chr5 (23-68)||(15912943-15912988)
chr5 (50-122)||(39056391-39056463)
chr5 (23-77)||(33868850-33868904)
chr5 (80-122)||(33868864-33868906)
chr5 (72-122)||(33868994-33869044)
chr5 (23-77)||(39056393-39056447)
chr5 (50-122)||(7183192-7183264)
chr5 (45-77)||(30407688-30407720)
chr5 (45-77)||(30407889-30407921)
chr5 (45-77)||(30408091-30408123)
chr5 (45-77)||(30408696-30408728)
chr5 (45-77)||(30408896-30408928)
[»] scaffold0581 (3 HSPs)
scaffold0581 (48-122)||(71-145)
scaffold0581 (48-122)||(272-344)
scaffold0581 (45-77)||(310-342)
[»] scaffold0460 (2 HSPs)
scaffold0460 (23-77)||(1813-1867)
scaffold0460 (72-122)||(1819-1869)
[»] scaffold0455 (8 HSPs)
scaffold0455 (72-122)||(1810-1860)
scaffold0455 (72-120)||(1611-1659)
scaffold0455 (21-79)||(1603-1661)
scaffold0455 (21-77)||(1802-1858)
scaffold0455 (72-122)||(1412-1462)
scaffold0455 (72-121)||(1172-1221)
scaffold0455 (28-77)||(1171-1220)
scaffold0455 (21-77)||(1404-1460)
[»] scaffold0104 (7 HSPs)
scaffold0104 (23-77)||(39117-39171)
scaffold0104 (72-122)||(39115-39165)
scaffold0104 (72-122)||(39479-39529)
scaffold0104 (28-77)||(39481-39530)
scaffold0104 (23-77)||(39252-39306)
scaffold0104 (74-122)||(38886-38934)
scaffold0104 (50-122)||(39250-39322)
[»] scaffold0069 (4 HSPs)
scaffold0069 (23-77)||(51568-51622)
scaffold0069 (72-121)||(51574-51623)
scaffold0069 (23-77)||(51430-51484)
scaffold0069 (50-122)||(51414-51486)
[»] scaffold0050 (10 HSPs)
scaffold0050 (23-77)||(22610-22664)
scaffold0050 (23-77)||(16128-16182)
scaffold0050 (23-77)||(22806-22860)
scaffold0050 (23-67)||(22720-22764)
scaffold0050 (72-122)||(16126-16176)
scaffold0050 (72-122)||(22608-22658)
scaffold0050 (25-77)||(16519-16571)
scaffold0050 (72-122)||(22804-22854)
scaffold0050 (49-122)||(16517-16590)
scaffold0050 (48-77)||(22902-22931)
[»] scaffold0012 (4 HSPs)
scaffold0012 (23-77)||(119411-119465)
scaffold0012 (72-122)||(119417-119467)
scaffold0012 (23-77)||(119273-119327)
scaffold0012 (50-122)||(119257-119329)
[»] scaffold0065 (6 HSPs)
scaffold0065 (50-122)||(24-96)
scaffold0065 (23-77)||(40-94)
scaffold0065 (23-77)||(805-858)
scaffold0065 (23-73)||(696-746)
scaffold0065 (72-122)||(811-860)
scaffold0065 (45-77)||(450-482)
[»] scaffold0717 (2 HSPs)
scaffold0717 (23-77)||(7145-7199)
scaffold0717 (72-122)||(7143-7193)
[»] scaffold0553 (2 HSPs)
scaffold0553 (79-122)||(6401-6444)
scaffold0553 (36-77)||(6401-6442)
[»] scaffold0006 (1 HSPs)
scaffold0006 (23-77)||(209535-209589)
[»] scaffold0002 (1 HSPs)
scaffold0002 (23-73)||(450410-450460)


Alignment Details
Target: chr8 (Bit Score: 114; Significance: 7e-58; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 40006073 - 40006190
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40006073 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggtttcacatagaacactatcaaaaccattacaccatacttatggttt 40006172  T
Q  121 cacatagaacactatcaa 138  Q
    ||||||||||||||||||    
T  40006173 cacatagaacactatcaa 40006190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 40006124 - 40006233
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttcacataga 128  Q
    |||||| ||||| || |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40006124 tggtttcacatagaacactatcaaaaccattacaccatacttatggtttcacatagaacactatcaaaaccattaaaccatacttatggtttcacataga 40006223  T
Q  129 acactatcaa 138  Q
    ||||||||||    
T  40006224 acactatcaa 40006233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 40006167 - 40006253
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttat 115  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  40006167 tggtttcacatagaacactatcaaaaccattaaaccatacttatggtttcacatagaacactatcaaaatcattagaccatacttat 40006253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 40005973 - 40006061
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    ||||||||||| |||||   | |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40005973 caaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttcacatagaacactatcaa 40006061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 40005994 - 40006073
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacacc 107  Q
    ||||||| ||||| || |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  40005994 ttggtttcacatagaacactatcaaaaccattagaccatacttatggtttcacatagaacactatcaaaaccattacacc 40006073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 17057664 - 17057593
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17057664 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggtttca 17057593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 17590561 - 17590632
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17590561 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggtttca 17590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 17225647 - 17225697
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17225647 tggttttacatagaacactatcaaaaccattaaaccatacttatggtttca 17225697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 17225639 - 17225695
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||||||||||||    
T  17225639 ccttaacttggttttacatagaacactatcaaaaccattaaaccatacttatggttt 17225695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 40005571 - 40005643
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| |||||   | |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  40005571 caaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttca 40005643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 17225825 - 17225875
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  17225825 tggttttacatagaacactattaaaaccattaaaccatacttatggtttca 17225875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 17225405 - 17225454
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttc 121  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  17225405 tggtttcacatagaacactatcaaaaccattaaaccatacttatggtttc 17225454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 17057463 - 17057391
Alignment:
Q  51 aaaaccattaaaccatacttatggtttt-acatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  ||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||    
T  17057463 aaaaccattacaccataagtatggtttttacataaaacactatcaaaaccattcaaccatacttatggtttca 17057391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 17057643 - 17057595
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  17057643 tggttttacatagaacactatcaaaaccattaaaccatacttatggttt 17057595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 17225817 - 17225873
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||    
T  17225817 ccttaacttggttttacatagaacactattaaaaccattaaaccatacttatggttt 17225873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 17590582 - 17590630
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  17590582 tggttttacatagaacactatcaaaaccattaaaccatacttatggttt 17590630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 17590762 - 17590834
Alignment:
Q  51 aaaaccattaaaccatacttatggtttt-acatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  ||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||    
T  17590762 aaaaccattacaccataagtatggtttttacataaaacactatcaaaaccattcaaccatacttatggtttca 17590834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 40005772 - 40005844
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| |||||   | |||||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  40005772 caaaaccattagaccattagtttggtttcacatagaacagtatcaaaaccattagaccatacttatggtttca 40005844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 17225404 - 17225453
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  17225404 ttggtttcacatagaacactatcaaaaccattaaaccatacttatggttt 17225453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 17057438 - 17057393
Alignment:
Q  32 ttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||    
T  17057438 ttttacataaaacactatcaaaaccattcaaccatacttatggttt 17057393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 17590787 - 17590832
Alignment:
Q  32 ttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||    
T  17590787 ttttacataaaacactatcaaaaccattcaaccatacttatggttt 17590832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 40005592 - 40005641
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||| ||||||||||||||||    
T  40005592 ttggtttcacatagaacactatcaaaaccattagaccatacttatggttt 40005641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 17057664 - 17057620
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  17057664 aaaaccattacaccataagtatggttttacatagaacactatcaa 17057620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 17590561 - 17590605
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  17590561 aaaaccattacaccataagtatggttttacatagaacactatcaa 17590605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 44509033 - 44508991
Alignment:
Q  80 catagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||| |||||||||||||||| |||||| |||||||||||    
T  44509033 catagaagactatcaaaaccattaaaccataattatggtttca 44508991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 40005793 - 40005842
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || | |||||||||||||| ||||||||||||||||    
T  40005793 ttggtttcacatagaacagtatcaaaaccattagaccatacttatggttt 40005842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 44509025 - 44508993
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||||||||||||| |||||||||    
T  44509025 actatcaaaaccattaaaccataattatggttt 44508993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 13420703 - 13420632
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13420703 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 13420632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 10564452 - 10564529
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||||||| || ||| ||||||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  10564452 actatcaaaaccattacacaatatttatggtttcacatacaatactatcaaaaccattaaaccatacttatggtttca 10564529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 10564643 - 10564720
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||||||| || ||| ||||||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  10564643 actatcaaaaccattacacaatatttatggtttcacatacaatactatcaaaaccattaaaccatacttatggtttca 10564720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 4721093 - 4721022
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  4721093 aaaaccattacaccataagtatggttttacatatgacactatcaaaaccattaaaccatacttatggtttca 4721022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 13420502 - 13420431
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  13420502 aaaaccattacaccataagtatggttttacaaagaacactatcaaaaccattcaaccatacttatggtttca 13420431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 45402727 - 45402673
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  45402727 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 45402673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 10564281 - 10564335
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  10564281 ttatcttggtttcacatacaatactatcaaaaccattaaatcatacttatggttt 10564335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 12283519 - 12283573
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  12283519 ttatcttggtttcacatacaatactgtcaaaaccattaaaccatacttatggttt 12283573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 10564479 - 10564527
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  10564479 tggtttcacatacaatactatcaaaaccattaaaccatacttatggttt 10564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 10564670 - 10564718
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  10564670 tggtttcacatacaatactatcaaaaccattaaaccatacttatggttt 10564718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 10564574 - 10564693
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta--cata--------gaacactatcaaaaccattacaccatacttatggt 118  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||| |  ||||        | | ||||||||||||||||||| ||| |||||||    
T  10564574 tggtttcacatacaataatatcaaaaccattaaaccatacttatggtttcagtcataatttcagtgtatactatcaaaaccattacacaatatttatggt 10564673  T
Q  119 ttcacatagaacactatcaa 138  Q
    |||||||| || ||||||||    
T  10564674 ttcacatacaatactatcaa 10564693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 6797242 - 6797196
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatact 69  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||    
T  6797242 ttatcttggtttcacatacaagactatcaaaaccattaaaccatact 6797196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 10564554 - 10564624
Alignment:
Q  52 aaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||| || ||| ||||||||| ||||| || | |||||||||||||| ||||||||||||||||||    
T  10564554 aaaccattacacaatatttatggtttcacatacaataatatcaaaaccattaaaccatacttatggtttca 10564624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 12283104 - 12283154
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  12283104 tggtttcacatagaacactatcaaaaccattaaaccatacttatagtttca 12283154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 12283410 - 12283464
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  12283410 ttatcttggtttcacatacaatactgtcaaaatcattaaaccatacttatggttt 12283464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 4721072 - 4721024
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||    
T  4721072 tggttttacatatgacactatcaaaaccattaaaccatacttatggttt 4721024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 10564356 - 10564432
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttc 121  Q
    ||||||||||||||   || ||| ||||||||| ||||| || | |||||||||||||| |||||||||||||||||    
T  10564356 actatcaaaaccatggcacaatatttatggtttcacatacaatattatcaaaaccattaaaccatacttatggtttc 10564432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 10564383 - 10564502
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt----------tacatagaacactatcaaaaccattacaccatacttatggt 118  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||||          | ||  | | ||||||||||||||||||| ||| |||||||    
T  10564383 tggtttcacatacaatattatcaaaaccattaaaccatacttatggtttcggtcataatttcagtgtatactatcaaaaccattacacaatatttatggt 10564482  T
Q  119 ttcacatagaacactatcaa 138  Q
    |||||||| || ||||||||    
T  10564483 ttcacatacaatactatcaa 10564502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 13420682 - 13420634
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  13420682 tggttttacatagaacactatcaaaaccattacaccatacttatggttt 13420634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 10563846 - 10563900
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| ||||  || |||||||||||| ||||||||||||||||||||    
T  10563846 ttatcttggtttcacatttaatactatcaaaaccgttaaaccatacttatggttt 10563900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 12283098 - 12283152
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| ||||| || |||||||||||||||||||||||||||| ||||    
T  12283098 ttatgttggtttcacatagaacactatcaaaaccattaaaccatacttatagttt 12283152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 45402721 - 45402671
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  45402721 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttca 45402671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 13420481 - 13420433
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||| | || ||||||||||||||| |||||||||||||||||    
T  13420481 tggttttacaaagaacactatcaaaaccattcaaccatacttatggttt 13420433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 13420703 - 13420659
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  13420703 aaaaccattacaccataagtatggttttacatagaacactatcaa 13420659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 6797380 - 6797326
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  6797380 ttattttggtttctcataaaagactatcaaaaccattaaaccataattatggttt 6797326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 10564287 - 10564337
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| | ||||||||||||||||    
T  10564287 tggtttcacatacaatactatcaaaaccattaaatcatacttatggtttca 10564337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 45402865 - 45402811
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  45402865 ttattttggtttctcataaaagactatcaaaaccattaaaccataattatggttt 45402811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 12283525 - 12283574
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttc 121  Q
    |||||| ||||| || ||| |||||||||||| |||||||||||||||||    
T  12283525 tggtttcacatacaatactgtcaaaaccattaaaccatacttatggtttc 12283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 12283285 - 12283357
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || |||||| |||| ||| ||| |||||||||||| | ||||||||||||||||    
T  12283285 caaaaccattagacaattattttggtttcacattgaagactgtcaaaaccattaaatcatacttatggtttca 12283357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 13420502 - 13420458
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||| |||||||||||||    
T  13420502 aaaaccattacaccataagtatggttttacaaagaacactatcaa 13420458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 45402881 - 45402809
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || ||||||  |||| || |||||||||||||||| |||||| |||||||||||    
T  45402881 caaaaccattagactattattttggtttctcataaaagactatcaaaaccattaaaccataattatggtttca 45402809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 5e-25; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 15034001 - 15034075
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15034001 atcaaaaccattacaccataagtatggttttacatagaacactatcaaaaccattataccatacttatggtttca 15034075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 22038181 - 22038110
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  22038181 aaaaccattacaccataagtatggttttacataaaacactatcaaaaccattaaaccatacttatggtttca 22038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 22038382 - 22038313
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  22038382 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggttt 22038313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 28123525 - 28123575
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28123525 tggttttacatagaacactatcaaaaccattataccatacttatggtttca 28123575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 22038552 - 22038487
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatg 116  Q
    |||||||||| ||||||  ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  22038552 aaaaccattacaccataagtatggttttacatagaacactattaaaaccattaaaccatacttatg 22038487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 7851545 - 7851599
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  7851545 ttatcttggttttacatacaagactatcaaaatcattaaaccacacttatggttt 7851599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 18762592 - 18762538
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  18762592 ttatcttgttttcacatacaatactatcaaaaccattaaaccatacttatggttt 18762538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 22038361 - 22038311
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  22038361 tggttttacatataacactatcaaaaccattaaaccatacttatggtttta 22038311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 28123326 - 28123376
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  28123326 tggttttacatcgaacactatcaaaaccattataccatacttatggtttca 28123376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 22038160 - 22038112
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  22038160 tggttttacataaaacactatcaaaaccattaaaccatacttatggttt 22038112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 28123517 - 28123573
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  28123517 ccttatattggttttacatagaacactatcaaaaccattataccatacttatggttt 28123573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 32556555 - 32556609
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||    
T  32556555 ttatcttggtttcacatgcaagactatcaaaaccattaaaccatatttatggttt 32556609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 28123086 - 28123135
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttc 121  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  28123086 tggtttcacatagaacactatcaaaaccattaaaccatacatatggtttc 28123135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 15034025 - 15034073
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  15034025 tggttttacatagaacactatcaaaaccattataccatacttatggttt 15034073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 28123318 - 28123374
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||| ||||||||||||  || |||||||||||||||| ||||||||||||||||    
T  28123318 ccttatattggttttacatcgaacactatcaaaaccattataccatacttatggttt 28123374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 15034001 - 15034048
Alignment:
Q  91 atcaaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||    
T  15034001 atcaaaaccattacaccataagtatggttttacatagaacactatcaa 15034048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 22038531 - 22038481
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||||||||||| || ||||| ||||||||||||||||||||||| |||||    
T  22038531 tggttttacatagaacactattaaaaccattaaaccatacttatgatttta 22038481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 28123085 - 28123134
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||||||||| ||||||||    
T  28123085 ttggtttcacatagaacactatcaaaaccattaaaccatacatatggttt 28123134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 18762855 - 18762783
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || |||||| |||| ||| ||| |||||||||||| ||||||||||||||||||    
T  18762855 caaaaccattagacaattattttggtttcacattgaagactgtcaaaaccattaaaccatacttatggtttca 18762783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 18762579 - 18762536
Alignment:
Q  79 acatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||| || |||||||||||||||| ||||||||||||||||||    
T  18762579 acatacaatactatcaaaaccattaaaccatacttatggtttca 18762536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 7851410 - 7851464
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  7851410 ttattttggtttctcatagaagactatcaaaaccattaaaccataattatggttt 7851464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 7851424 - 7851466
Alignment:
Q  80 catagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||| |||||||||||||||| |||||| |||||||||||    
T  7851424 catagaagactatcaaaaccattaaaccataattatggtttca 7851466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 7851551 - 7851601
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||| || |||||||||| ||||| |||| |||||||||||||    
T  7851551 tggttttacatacaagactatcaaaatcattaaaccacacttatggtttca 7851601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 18762483 - 18762429
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||| ||| ||||  |||||||||||||||||||||| ||||    
T  18762483 ttatcttggtttcacatgcaatactaaaaaaaccattaaaccatacttattgttt 18762429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 18762839 - 18762785
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| ||||  || ||| |||||||||||||||||||||||||||||    
T  18762839 ttattttggtttcacattgaagactgtcaaaaccattaaaccatacttatggttt 18762785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 22038552 - 22038511
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactat 135  Q
    |||||||||||||||||  |||||||| ||||||||||||||    
T  22038552 aaaaccattacaccataagtatggttttacatagaacactat 22038511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 22038181 - 22038137
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  22038181 aaaaccattacaccataagtatggttttacataaaacactatcaa 22038137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 22038382 - 22038338
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  22038382 aaaaccattacaccataagtatggttttacatataacactatcaa 22038338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 3e-23; HSPs: 8)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 126330 - 126259
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  126330 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggtttca 126259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 126500 - 126429
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  126500 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatatttatggtttca 126429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 128653 - 128582
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  128653 aaaaccattacaccataagtatggttttacatatgacactatcaaaaccattaaaccatacttatggtttca 128582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 126309 - 126261
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  126309 tggttttacatagaacactatcaaaaccattaaaccatacttatggttt 126261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 126479 - 126431
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||    
T  126479 tggttttacatagaacactatcaaaaccattaaaccatatttatggttt 126431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 128632 - 128584
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||    
T  128632 tggttttacatatgacactatcaaaaccattaaaccatacttatggttt 128584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 126330 - 126286
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  126330 aaaaccattacaccataagtatggttttacatagaacactatcaa 126286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 126500 - 126456
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  126500 aaaaccattacaccataagtatggttttacatagaacactatcaa 126456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 11974903 - 11974974
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11974903 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggtttca 11974974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 11975413 - 11975484
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11975413 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattataccatacttatggtttca 11975484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 11975073 - 11975144
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  11975073 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaatcatacttatggtttca 11975144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 11975243 - 11975314
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  11975243 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatagtttca 11975314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 32233200 - 32233254
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  32233200 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 32233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 40219378 - 40219306
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| |||||   | |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  40219378 caaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttca 40219306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 40219579 - 40219507
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| |||||   | |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  40219579 caaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttca 40219507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 40219780 - 40219708
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| |||||   | |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  40219780 caaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttca 40219708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 40219981 - 40219909
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| |||||   | |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  40219981 caaaaccattagaccattagtttggtttcacatagaacactatcaaaaccattagaccatacttatggtttca 40219909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 11974924 - 11974972
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  11974924 tggttttacatagaacactatcaaaaccattaaaccatacttatggttt 11974972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 11975094 - 11975142
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||    
T  11975094 tggttttacatagaacactatcaaaaccattaaatcatacttatggttt 11975142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 11975264 - 11975312
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||| ||||    
T  11975264 tggttttacatagaacactatcaaaaccattaaaccatacttatagttt 11975312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 11975434 - 11975482
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  11975434 tggttttacatagaacactatcaaaaccattataccatacttatggttt 11975482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 32233206 - 32233256
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  32233206 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttca 32233256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 40219357 - 40219308
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||| ||||||||||||||||    
T  40219357 ttggtttcacatagaacactatcaaaaccattagaccatacttatggttt 40219308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 40219558 - 40219509
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||| ||||||||||||||||    
T  40219558 ttggtttcacatagaacactatcaaaaccattagaccatacttatggttt 40219509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 40219759 - 40219710
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||| ||||||||||||||||    
T  40219759 ttggtttcacatagaacactatcaaaaccattagaccatacttatggttt 40219710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 40219960 - 40219911
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||| ||||||||||||||||    
T  40219960 ttggtttcacatagaacactatcaaaaccattagaccatacttatggttt 40219911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 11974903 - 11974947
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  11974903 aaaaccattacaccataagtatggttttacatagaacactatcaa 11974947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 11975073 - 11975117
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  11975073 aaaaccattacaccataagtatggttttacatagaacactatcaa 11975117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 11975243 - 11975287
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  11975243 aaaaccattacaccataagtatggttttacatagaacactatcaa 11975287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 11975413 - 11975457
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  11975413 aaaaccattacaccataagtatggttttacatagaacactatcaa 11975457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 21173742 - 21173671
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21173742 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggtttca 21173671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 27970533 - 27970604
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27970533 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggtttca 27970604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 27970332 - 27970401
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27970332 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggttt 27970401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 28056837 - 28056906
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28056837 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggttt 28056906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 30767545 - 30767614
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30767545 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggttt 30767614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 30771708 - 30771777
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30771708 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggttt 30771777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 44348332 - 44348261
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  44348332 aaaaccattacaccataagtatggttttacataaaacactatcaaaaccattaaaccatacttatggtttca 44348261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 44348533 - 44348464
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  44348533 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggttt 44348464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 21173572 - 21173501
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  21173572 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacttatggtttca 21173501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 27970162 - 27970233
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  ||||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  27970162 aaaaccattacaccataagtatggttttacatagaacactgtcaaaaccattaaaccatatttatggtttca 27970233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 28056667 - 28056738
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  ||||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  28056667 aaaaccattacaccataagtatggttttacatagaacactgtcaaaaccattaaaccatatttatggtttca 28056738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 44350856 - 44350785
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  44350856 aaaaccattacaccataagtatggttttacatatgacactatcaaaaccattaaaccatacttatggtttca 44350785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 28056209 - 28056263
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28056209 ttatattggttttacatacaagactatcaaaaccattaaaccatacttatggttt 28056263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 44348703 - 44348638
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatg 116  Q
    |||||||||| ||||||  ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  44348703 aaaaccattacaccataagtatggttttacatagaacactattaaaaccattaaaccatacttatg 44348638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 28057038 - 28057097
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccata 110  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  28057038 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccata 28057097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 28048269 - 28048319
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  28048269 tggtttcacatagaacactatcaaaaccattaaaccatacttatggtttca 28048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 44348512 - 44348462
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  44348512 tggttttacatataacactatcaaaaccattaaaccatacttatggtttta 44348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 27970353 - 27970402
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttt 78  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  27970353 tggttttacatagaacactatcaaaaccattaaaccatacttatggtttt 27970402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 27970703 - 27970772
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  ||| |||||||||||||||  ||||||||||||| ||||||||||||||||    
T  27970703 aaaaccattacaccataagtatagttttacatagaacaaaatcaaaaccattaaaccatacttatggttt 27970772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 28056858 - 28056907
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttt 78  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  28056858 tggttttacatagaacactatcaaaaccattaaaccatacttatggtttt 28056907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 30767566 - 30767615
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttt 78  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  30767566 tggttttacatagaacactatcaaaaccattaaaccatacttatggtttt 30767615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 30771729 - 30771778
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttt 78  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  30771729 tggttttacatagaacactatcaaaaccattaaaccatacttatggtttt 30771778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 21173721 - 21173673
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  21173721 tggttttacatagaacactatcaaaaccattaaaccatacttatggttt 21173673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 27970554 - 27970602
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  27970554 tggttttacatagaacactatcaaaaccattaaaccatacttatggttt 27970602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 44348311 - 44348263
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  44348311 tggttttacataaaacactatcaaaaccattaaaccatacttatggttt 44348263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 28056215 - 28056265
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  28056215 tggttttacatacaagactatcaaaaccattaaaccatacttatggtttca 28056265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 28048268 - 28048317
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  28048268 ttggtttcacatagaacactatcaaaaccattaaaccatacttatggttt 28048317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 21173551 - 21173503
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||    
T  21173551 tggttttacatataacactatcaaaaccattaaatcatacttatggttt 21173503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 44350835 - 44350787
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||    
T  44350835 tggttttacatatgacactatcaaaaccattaaaccatacttatggttt 44350787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 44348682 - 44348632
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||||||||||| || ||||| ||||||||||||||||||||||| |||||    
T  44348682 tggttttacatagaacactattaaaaccattaaaccatacttatgatttta 44348632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 21173742 - 21173698
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  21173742 aaaaccattacaccataagtatggttttacatagaacactatcaa 21173698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 27970183 - 27970231
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || ||| ||||||||||||||||||| |||||||||    
T  27970183 tggttttacatagaacactgtcaaaaccattaaaccatatttatggttt 27970231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 27970332 - 27970376
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  27970332 aaaaccattacaccataagtatggttttacatagaacactatcaa 27970376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 27970533 - 27970577
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  27970533 aaaaccattacaccataagtatggttttacatagaacactatcaa 27970577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 27970726 - 27970774
Alignment:
Q  31 gttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||||||||| || |  ||||||||||||||||||||||||||||||||    
T  27970726 gttttacatagaacaaaatcaaaaccattaaaccatacttatggtttta 27970774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 28056688 - 28056736
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || ||| ||||||||||||||||||| |||||||||    
T  28056688 tggttttacatagaacactgtcaaaaccattaaaccatatttatggttt 28056736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 28056837 - 28056881
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  28056837 aaaaccattacaccataagtatggttttacatagaacactatcaa 28056881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 28057038 - 28057082
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  28057038 aaaaccattacaccataagtatggttttacatagaacactatcaa 28057082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 30767545 - 30767589
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  30767545 aaaaccattacaccataagtatggttttacatagaacactatcaa 30767589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 30771708 - 30771752
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  30771708 aaaaccattacaccataagtatggttttacatagaacactatcaa 30771752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 27970904 - 27970955
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccatt 102  Q
    |||||||||| ||||||  ||||||||||||||||||||||| |||| ||||    
T  27970904 aaaaccattacaccataagtatggttttacatagaacactattaaaatcatt 27970955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 28057059 - 28057097
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccata 67  Q
    |||||||||||| || |||||||||||||||||||||||    
T  28057059 tggttttacatagaacactatcaaaaccattaaaccata 28057097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 27970904 - 27970945
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactat 135  Q
    |||||||||||||||||  |||||||| ||||||||||||||    
T  27970904 aaaaccattacaccataagtatggttttacatagaacactat 27970945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 44348703 - 44348662
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactat 135  Q
    |||||||||||||||||  |||||||| ||||||||||||||    
T  44348703 aaaaccattacaccataagtatggttttacatagaacactat 44348662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 21173572 - 21173528
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  21173572 aaaaccattacaccataagtatggttttacatataacactatcaa 21173528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 24024635 - 24024563
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || ||||||  ||||||| | |||||||||||||| |||||| |||||||||||    
T  24024635 caaaaccattagacaattattttggtttctcatagaagattatcaaaaccattaaaccataattatggtttca 24024563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 27970162 - 27970206
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||| ||||    
T  27970162 aaaaccattacaccataagtatggttttacatagaacactgtcaa 27970206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 28056667 - 28056711
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||| ||||    
T  28056667 aaaaccattacaccataagtatggttttacatagaacactgtcaa 28056711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 30771422 - 30771478
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||| ||||||| ||||  || ||| ||||||||||||| |||||||||||||||||    
T  30771422 ttattttggtttcacattgaagactgtcaaaaccattaagccatacttatggtttta 30771478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 44348332 - 44348288
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  44348332 aaaaccattacaccataagtatggttttacataaaacactatcaa 44348288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 44348533 - 44348489
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  44348533 aaaaccattacaccataagtatggttttacatataacactatcaa 44348489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 37509334 - 37509392
Alignment:
Q  212 aacaccccctcaaattcaaatctatcatgcacttattttctttatcaccttcatctcac 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37509334 aacaccccctcaaattcaaatctatcatgcacttattttctttatcaccttcatttcac 37509392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 54757688 - 54757762
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  54757688 atcaaaaccattacaccataagtatggttttacctagaacactatcaaaaccattataccatacttatggtttca 54757762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 809019 - 808950
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  809019 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattaaaccatacttatggttt 808950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 809730 - 809659
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  809730 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 809659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 810101 - 810030
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  810101 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 810030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 54757487 - 54757561
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  54757487 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattataccatacttatggtttca 54757561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 809931 - 809862
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  809931 aaaaccattacaccataagtatggttttacatagaacactatcaaaatcattaaaccatacttatggttt 809862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 808818 - 808747
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  808818 aaaaccattacaccataagtatggttttacatataatactatcaaaaccattaaaccatacttatggtttca 808747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 809189 - 809118
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  809189 aaaaccattacaccataagtatggttttacatataatactatcaaaaccattaaaccatacttatggtttca 809118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 809560 - 809489
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| | ||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  809560 aaaaccattacatcataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 809489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 54754321 - 54754392
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  54754321 aaaaccattacaccataagtatggttttacatatgacactatcaaaaccattaaaccatacttatggtttca 54754392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 2847967 - 2847913
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  2847967 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 2847913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 20588101 - 20588047
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  20588101 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 20588047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 54756683 - 54756757
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| | ||||  ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  54756683 atcaaaaccattacatcataagtatggttttacctagtacactatcaaaaccattataccatacttatggtttca 54756757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 54756884 - 54756958
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| || |||  ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  54756884 atcaaaaccattacacaataagtatggttttacctagtacactatcaaaaccattataccatacttatggtttca 54756958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 54756482 - 54756554
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||||||||||  ||||||||    
T  54756482 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattacaccataagtatggttt 54756554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 54757286 - 54757358
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||||||||||  ||||||||    
T  54757286 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattacaccataaatatggttt 54757358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 808998 - 808948
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  808998 tggttttacatagaacactatcaaaaccattaaaccatacttatggtttta 808948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 1701181 - 1701131
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatg 73  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  1701181 ttatcttagttttacatacaacactatcaaaaccattaaaccatacttatg 1701131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 808797 - 808749
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  808797 tggttttacatataatactatcaaaaccattaaaccatacttatggttt 808749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 809168 - 809120
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  809168 tggttttacatataatactatcaaaaccattaaaccatacttatggttt 809120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 809539 - 809491
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  809539 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 809491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 809709 - 809661
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  809709 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 809661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 810080 - 810032
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  810080 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 810032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 809390 - 809319
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||  ||||||||| ||||| ||||||||||||||||||    
T  809390 aaaaccattacaccataagtatggttttacatataattctatcaaaatcattaaaccatacttatggtttca 809319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 9561631 - 9561588
Alignment:
Q  79 acatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  9561631 acatagaacactatcaaaaccattaaaccatacttatggtttca 9561588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 809910 - 809860
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  809910 tggttttacatagaacactatcaaaatcattaaaccatacttatggtttta 809860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 54757085 - 54757159
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||| ||| ||||||  ||||||||||    
T  54757085 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccgttataccataagtatggtttca 54757159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 55780323 - 55780373
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  55780323 tggtttcacatagaatactatcaaaaccattaaaccatacttatggtttca 55780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 55844503 - 55844553
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  55844503 tggtttcacatagaatactatcaaaaccattaaaccatacttatggtttca 55844553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 55780322 - 55780371
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  55780322 ttggtttcacatagaatactatcaaaaccattaaaccatacttatggttt 55780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 55844502 - 55844551
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  55844502 ttggtttcacatagaatactatcaaaaccattaaaccatacttatggttt 55844551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 810281 - 810233
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  810281 tggtttcacataggacactatcaaaaccattaaaccatacttatggttt 810233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 54754342 - 54754390
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||    
T  54754342 tggttttacatatgacactatcaaaaccattaaaccatacttatggttt 54754390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 808648 - 808597
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccatt 102  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||| ||||    
T  808648 aaaaccattacaccataagtatggttttacatagaacactatcaaaatcatt 808597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 810282 - 810232
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggtttt 78  Q
    ||||||| |||||  | ||||||||||||||||||||||||||||||||||    
T  810282 ttggtttcacataggacactatcaaaaccattaaaccatacttatggtttt 810232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 1701173 - 1701131
Alignment:
Q  74 gttttacatagaacactatcaaaaccattacaccatacttatg 116  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  1701173 gttttacatacaacactatcaaaaccattaaaccatacttatg 1701131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 2847961 - 2847911
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  2847961 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttca 2847911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 9561644 - 9561590
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||| ||| ||||| || |||||||||||||||||||||||||||||||||    
T  9561644 ttattttgatttcacatagaacactatcaaaaccattaaaccatacttatggttt 9561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 20588095 - 20588045
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  20588095 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttca 20588045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 808648 - 808604
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  808648 aaaaccattacaccataagtatggttttacatagaacactatcaa 808604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 809019 - 808975
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  809019 aaaaccattacaccataagtatggttttacatagaacactatcaa 808975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 809369 - 809321
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| ||  ||||||||| ||||||||||||||||||||||    
T  809369 tggttttacatataattctatcaaaatcattaaaccatacttatggttt 809321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 809931 - 809887
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  809931 aaaaccattacaccataagtatggttttacatagaacactatcaa 809887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 34986297 - 34986369
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || ||||||  ||||||| |||||||||||||||| |||||| |||||||||||    
T  34986297 caaaaccattagacaattattttggtttctcatagaagactatcaaaaccattaaaccataattatggtttca 34986369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 54757712 - 54757760
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||| || || |||||||||||||||| ||||||||||||||||    
T  54757712 tggttttacctagaacactatcaaaaccattataccatacttatggttt 54757760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 54757688 - 54757735
Alignment:
Q  91 atcaaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    ||||||||||||||||||||  |||||||| || ||||||||||||||    
T  54757688 atcaaaaccattacaccataagtatggttttacctagaacactatcaa 54757735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 9561121 - 9561067
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| | |||||| | |||||||| ||||||||||||||||||||||    
T  9561121 ttattttggtttcatatacaagaatatcaaaatcattaaaccatacttatggttt 9561067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 34986313 - 34986367
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  34986313 ttattttggtttctcatagaagactatcaaaaccattaaaccataattatggttt 34986367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 54756423 - 54756456
Alignment:
Q  70 tatggttttacatagaacactatcaaaaccatta 103  Q
    |||| |||||||||||||||||||||||||||||    
T  54756423 tatgtttttacatagaacactatcaaaaccatta 54756456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 809730 - 809686
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  809730 aaaaccattacaccataagtatggttttacatataacactatcaa 809686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 810101 - 810057
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  810101 aaaaccattacaccataagtatggttttacatataacactatcaa 810057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 9561275 - 9561203
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || |||||| |||| ||| | |||||||||||||| | ||||||||||||||||    
T  9561275 caaaaccattagacaattattttggtttcacattgaagattatcaaaaccattaaatcatacttatggtttca 9561203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 54756723 - 54756755
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  54756723 actatcaaaaccattataccatacttatggttt 54756755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 54756924 - 54756956
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  54756924 actatcaaaaccattataccatacttatggttt 54756956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 54757527 - 54757559
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  54757527 actatcaaaaccattataccatacttatggttt 54757559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 52; Significance: 7e-21; HSPs: 5)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 8938 - 8867
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  8938 aaaaccattacaccataagtatggttttacatagaacactatcaaaaccattcaaccatacttatggtttca 8867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 5925 - 5970
Alignment:
Q  77 ttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  5925 ttacatagaacactatcaaaaccattaaaccatacttatggtttca 5970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 8917 - 8869
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||||    
T  8917 tggttttacatagaacactatcaaaaccattcaaccatacttatggttt 8869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 5925 - 5968
Alignment:
Q  34 ttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  5925 ttacatagaacactatcaaaaccattaaaccatacttatggttt 5968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 8938 - 8894
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| |||||||||||||||||    
T  8938 aaaaccattacaccataagtatggttttacatagaacactatcaa 8894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 52; Significance: 7e-21; HSPs: 40)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 19684 - 19755
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  19684 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 19755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 28798 - 28869
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  28798 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 28869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 33467 - 33396
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33467 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 33396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 33977 - 33906
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33977 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 33906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 19514 - 19585
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  19514 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacttatggtttca 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 19854 - 19921
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggt 118  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  19854 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggt 19921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 30944 - 31015
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  | |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  30944 aaaaccattacaccataagtttggttttacatataacactatcaaaaccattaaaccatacttatggtttca 31015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 33637 - 33566
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  33637 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacttatggtttca 33566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 34147 - 34076
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  34147 aaaaccattacaccataagtatggttttaaatataacactatcaaaaccattaaaccatacttatggtttca 34076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 34317 - 34246
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  34317 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccacacttatggtttca 34246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 34487 - 34416
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  34487 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacttatggtttca 34416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 28628 - 28699
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||| ||||| ||||||  |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  28628 aaaatcattacaccataagtatggttttacatataacactatcaaaatcattaaaccatacttatggtttca 28699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 33807 - 33736
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  33807 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaatcatacatatggtttca 33736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 30964 - 31013
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  30964 ttggttttacatataacactatcaaaaccattaaaccatacttatggttt 31013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 19705 - 19753
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  19705 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 19753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 28819 - 28867
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  28819 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 28867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 33446 - 33398
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  33446 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 33398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 33956 - 33908
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  33956 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 33908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 34657 - 34586
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||| ||||| ||||||  ||||||| |||||| |||||| |||||||||||| ||||||||||||||||||    
T  34657 aaaatcattacaccataagtatggttgtacatataacactgtcaaaaccattaaaccatacttatggtttca 34586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 19875 - 19921
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggt 75  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  19875 tggttttacatataacactatcaaaaccattaaaccatacttatggt 19921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 19363 - 19415
Alignment:
Q  70 tatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||| |||||| |||||| |||||||||||| ||||||||||||||||||    
T  19363 tatggttgtacatataacactgtcaaaaccattaaaccatacttatggtttca 19415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 19535 - 19583
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||    
T  19535 tggttttacatataacactatcaaaaccattaaatcatacttatggttt 19583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 28649 - 28697
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||| ||||||||||||||||||||||    
T  28649 tggttttacatataacactatcaaaatcattaaaccatacttatggttt 28697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 33616 - 33568
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||    
T  33616 tggttttacatataacactatcaaaaccattaaatcatacttatggttt 33568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 34126 - 34078
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||| ||| || |||||||||||||||||||||||||||||||||    
T  34126 tggttttaaatataacactatcaaaaccattaaaccatacttatggttt 34078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 34296 - 34248
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || ||||||||||||||||||||| |||||||||||    
T  34296 tggttttacatataacactatcaaaaccattaaaccacacttatggttt 34248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 34466 - 34418
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||    
T  34466 tggttttacatataacactatcaaaaccattaaatcatacttatggttt 34418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 19365 - 19413
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||| |||||| || ||| |||||||||||||||||||||||||||||    
T  19365 tggttgtacatataacactgtcaaaaccattaaaccatacttatggttt 19413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 33786 - 33738
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||| ||||| ||||||||    
T  33786 tggttttacatataacactatcaaaaccattaaatcatacatatggttt 33738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 34636 - 34588
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||| |||||| || ||| |||||||||||||||||||||||||||||    
T  34636 tggttgtacatataacactgtcaaaaccattaaaccatacttatggttt 34588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 19514 - 19558
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  19514 aaaaccattacaccataagtatggttttacatataacactatcaa 19558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 19684 - 19728
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  19684 aaaaccattacaccataagtatggttttacatataacactatcaa 19728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 19854 - 19898
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  19854 aaaaccattacaccataagtatggttttacatataacactatcaa 19898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 28798 - 28842
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  28798 aaaaccattacaccataagtatggttttacatataacactatcaa 28842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 33467 - 33423
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  33467 aaaaccattacaccataagtatggttttacatataacactatcaa 33423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 33637 - 33593
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  33637 aaaaccattacaccataagtatggttttacatataacactatcaa 33593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 33807 - 33763
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  33807 aaaaccattacaccataagtatggttttacatataacactatcaa 33763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 33977 - 33933
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  33977 aaaaccattacaccataagtatggttttacatataacactatcaa 33933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 34317 - 34273
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  34317 aaaaccattacaccataagtatggttttacatataacactatcaa 34273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 34487 - 34443
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  34487 aaaaccattacaccataagtatggttttacatataacactatcaa 34443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 37223746 - 37223817
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37223746 aaaaccattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 37223817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 20481302 - 20481356
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20481302 ttatcttggttttacatacaagactatcaaaaccattaaaccatacttatggttt 20481356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 19846069 - 19846125
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  19846069 ccttatcttggttttacatagaacactatcaaaaccattaaaccatacttatggttt 19846125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 37223576 - 37223647
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| |||||   |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37223576 aaaaccattacaccattagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 37223647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 37223916 - 37223987
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||| ||||| ||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37223916 aaaatcattacaccataagtatggttttacatataacactatcaaaaccattaaaccatacttatggtttca 37223987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 37224086 - 37224157
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  37224086 aaaaccattacaccataagtatggttttacatataacactatcaaaatcattaaaccatacttatggtttca 37224157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 19846077 - 19846127
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19846077 tggttttacatagaacactatcaaaaccattaaaccatacttatggtttca 19846127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 20372406 - 20372460
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  20372406 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 20372460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 37223236 - 37223307
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||| |||| ||||||  ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37223236 aaaactattacaccataagtatcgttttacatataacactatcaaaaccattaaaccatacttatggtttca 37223307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 19845837 - 19845886
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttc 121  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  19845837 tggtttcacatagaacactatcaaaaccattaaaccatacttatggtttc 19845886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 37223597 - 37223645
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  37223597 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 37223645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 37223767 - 37223815
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  37223767 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 37223815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 37223937 - 37223985
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||    
T  37223937 tggttttacatataacactatcaaaaccattaaaccatacttatggttt 37223985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 37223406 - 37223477
Alignment:
Q  51 aaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||| ||||||   |||||| |||||| |||||| |||||||||||| ||||||||||||||||||    
T  37223406 aaaaccattacaccataagcatggttctacatataacactgtcaaaaccattaaaccatacttatggtttca 37223477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 13590676 - 13590730
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| |||| |||||||| |||||||||||||||||| ||||||||||||||    
T  13590676 ttatcttcgtttcacatacaagactatcaaaaccattaaatcatacttatggttt 13590730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 20481308 - 20481358
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  20481308 tggttttacatacaagactatcaaaaccattaaaccatacttatggtttca 20481358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 37223259 - 37223305
Alignment:
Q  31 gttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||| || |||||||||||||||||||||||||||||||||    
T  37223259 gttttacatataacactatcaaaaccattaaaccatacttatggttt 37223305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 19845836 - 19845885
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  19845836 ttggtttcacatagaacactatcaaaaccattaaaccatacttatggttt 19845885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 37224107 - 37224155
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| || |||||||||| ||||||||||||||||||||||    
T  37224107 tggttttacatataacactatcaaaatcattaaaccatacttatggttt 37224155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 20372412 - 20372461
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttc 121  Q
    |||||| ||||| || |||||||||||||||| |||||||||||||||||    
T  20372412 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttc 20372461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 37223427 - 37223475
Alignment:
Q  29 tggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||| |||||| || ||| |||||||||||||||||||||||||||||    
T  37223427 tggttctacatataacactgtcaaaaccattaaaccatacttatggttt 37223475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 13590684 - 13590732
Alignment:
Q  74 gttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||| ||||| || |||||||||||||||| | ||||||||||||||||    
T  13590684 gtttcacatacaagactatcaaaaccattaaatcatacttatggtttca 13590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 37223746 - 37223790
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  37223746 aaaaccattacaccataagtatggttttacatataacactatcaa 37223790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 37224086 - 37224130
Alignment:
Q  94 aaaaccattacaccatacttatggtttcacatagaacactatcaa 138  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||    
T  37224086 aaaaccattacaccataagtatggttttacatataacactatcaa 37224130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 51; Significance: 3e-20; HSPs: 7)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 10772 - 10826
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10772 ttatcttggttttacatacaacactatcaaaaccattaaaccatacttatggttt 10826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 10058 - 10130
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || |||  | |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  10058 caaaaccattagacaataagtttggtttcacatagaacactatcaaaaccattaaaccatacttatggtttca 10130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 10778 - 10828
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  10778 tggttttacatacaacactatcaaaaccattaaaccatacttatggtttca 10828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 10457 - 10507
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  10457 tggtttcacatagaacactaccaaaaccattaaaccatacttatggtttca 10507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 10079 - 10128
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  10079 ttggtttcacatagaacactatcaaaaccattaaaccatacttatggttt 10128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 10456 - 10505
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||| ||||||||||||||||||||||||||||    
T  10456 ttggtttcacatagaacactaccaaaaccattaaaccatacttatggttt 10505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 10655 - 10709
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| ||||  |||||||||||||||||||||| |||| ||||||||    
T  10655 ttattttggtttcacattgaaaactatcaaaaccattaaactatacgtatggttt 10709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 3e-20; HSPs: 6)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 168668 - 168722
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  168668 ttatcttggttttacatacaacactatcaaaaccattaaaccatacttatggttt 168722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 168674 - 168724
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  168674 tggttttacatacaacactatcaaaaccattaaaccatacttatggtttca 168724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 168345 - 168395
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  168345 tggtttcacatagaacactatcaaaaccattaaatcatacttatggtttca 168395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 168533 - 168587
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| ||||  ||||||||||||||||||||||||||| ||||||||    
T  168533 ttattttggtttcacattgaaaactatcaaaaccattaaaccatacgtatggttt 168587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 168344 - 168393
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||| ||||||||||||||    
T  168344 ttggtttcacatagaacactatcaaaaccattaaatcatacttatggttt 168393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 168517 - 168589
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || |||||| |||| ||| |||||||||||||||| ||||||| ||||||||||    
T  168517 caaaaccattagacaattattttggtttcacattgaaaactatcaaaaccattaaaccatacgtatggtttca 168589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 30407760 - 30407686
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  30407760 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattataccatacttatggtttca 30407686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 30407961 - 30407887
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  30407961 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattataccatacttatggtttca 30407887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 30408163 - 30408089
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  30408163 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattataccatacttatggtttca 30408089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 30408968 - 30408894
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  30408968 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattataccatacttatggtttca 30408894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 7183346 - 7183400
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  7183346 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 7183400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 30408365 - 30408291
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||| | ||||||||||||||||    
T  30408365 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattatagcatacttatggtttca 30408291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 30408567 - 30408493
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||||||||||||||||| |||||||||||| |||||    
T  30408567 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattataccatacttatgatttca 30408493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 30408768 - 30408694
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| || |||  ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  30408768 atcaaaaccattacacaataagtatggttttacctagtacactatcaaaaccattataccatacttatggtttca 30408694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 39056309 - 39056255
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  39056309 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 39056255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 33868988 - 33869042
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  33868988 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttttggttt 33869042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 25192345 - 25192289
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||    
T  25192345 ccttatcttggttttacatagaacactttcaaaaccattaaaccatacgtatggttt 25192289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 25192337 - 25192287
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  25192337 tggttttacatagaacactttcaaaaccattaaaccatacgtatggtttca 25192287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 7183352 - 7183402
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  7183352 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttca 7183402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 39056303 - 39056253
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  39056303 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttca 39056253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 15912988 - 15912943
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatac 68  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||||    
T  15912988 ttatattggtttcacatacaagactatcaaaaccattaaaccatac 15912943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 39056463 - 39056391
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || ||||||  ||||||| |||||||||||||||| |||||| |||||||||||    
T  39056463 caaaaccattagacaattattttggtttctcatagaagactatcaaaaccattaaaccataattatggtttca 39056391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 33868850 - 33868904
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  33868850 ttattttggtttctcatagaagactatcaaaaccattaaaccataattatggttt 33868904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 33868864 - 33868906
Alignment:
Q  80 catagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||| |||||||||||||||| |||||| |||||||||||    
T  33868864 catagaagactatcaaaaccattaaaccataattatggtttca 33868906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 33868994 - 33869044
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||| ||||||||    
T  33868994 tggtttcacatacaagactatcaaaaccattaaaccatacttttggtttca 33869044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 39056447 - 39056393
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  39056447 ttattttggtttctcatagaagactatcaaaaccattaaaccataattatggttt 39056393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 7183192 - 7183264
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || ||||||  ||||||| |||||||||| ||||| |||||| |||||||||||    
T  7183192 caaaaccattagacaattattttggtttctcatagaagactatcaaaatcattaaaccataattatggtttca 7183264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 30407720 - 30407688
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  30407720 actatcaaaaccattataccatacttatggttt 30407688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 30407921 - 30407889
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  30407921 actatcaaaaccattataccatacttatggttt 30407889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 30408123 - 30408091
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  30408123 actatcaaaaccattataccatacttatggttt 30408091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 30408728 - 30408696
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  30408728 actatcaaaaccattataccatacttatggttt 30408696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 30408928 - 30408896
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  30408928 actatcaaaaccattataccatacttatggttt 30408896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 71 - 145
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| ||||||||||||||||||  |||||||||||||||||    
T  71 atcaaaaccattacaccataagtatggttttacctagtacactatcaaaaccattatcccatacttatggtttca 145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 272 - 344
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||| ||||||  ||||||||||| ||| ||  |||||||||||||| ||||||||||||||||||    
T  272 atcaaaaccattacaccataagtatggttttacctagtac--tatcaaaaccattataccatacttatggtttca 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 310 - 342
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  310 actatcaaaaccattataccatacttatggttt 342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 1813 - 1867
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  1813 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 1867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 1819 - 1869
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  1819 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttca 1869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 47; Significance: 7e-18; HSPs: 8)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 1810 - 1860
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1810 tggttttacatagaacactatcaaaaccattataccatacttatggtttca 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 1611 - 1659
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggttt 120  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1611 tggttttacatagaacactatcaaaaccattataccatacttatggttt 1659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 1603 - 1661
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggtttta 79  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  1603 ccttatattggttttacatagaacactatcaaaaccattataccatacttatggtttta 1661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 1802 - 1858
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  1802 ccttatattggttttacatagaacactatcaaaaccattataccatacttatggttt 1858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 1412 - 1462
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  1412 tggttttacatcgaacactatcaaaaccattatcccatacttatggtttca 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 1172 - 1221
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttc 121  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  1172 tggtttcacatagaacactatcaaaaccattaaaccatacatatggtttc 1221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 1171 - 1220
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || |||||||||||||||||||||||| ||||||||    
T  1171 ttggtttcacatagaacactatcaaaaccattaaaccatacatatggttt 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 1404 - 1460
Alignment:
Q  21 ccttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||| ||||||||||||  || ||||||||||||||||  |||||||||||||||    
T  1404 ccttatattggttttacatcgaacactatcaaaaccattatcccatacttatggttt 1460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 47; Significance: 7e-18; HSPs: 7)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 39171 - 39117
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  39171 ttatcttggttttacatacaacactatcaaaatcattaaaccatacttatggttt 39117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 39165 - 39115
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  39165 tggttttacatacaacactatcaaaatcattaaaccatacttatggtttca 39115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 39529 - 39479
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  39529 tggtttcacatagaacactatcaaaactattaaaccatacttatggtttca 39479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 39530 - 39481
Alignment:
Q  28 ttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||||| ||||| || ||||||||||| |||||||||||||||||||||    
T  39530 ttggtttcacatagaacactatcaaaactattaaaccatacttatggttt 39481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 39306 - 39252
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| ||||  |||| |||||||||||||||||||||| ||||||||    
T  39306 ttattttggtttcacattgaaaattatcaaaaccattaaaccatacgtatggttt 39252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 38934 - 38886
Alignment:
Q  74 gttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||| ||||||||||||||||||||||||| ||| |||| | |||||||    
T  38934 gtttcacatagaacactatcaaaaccattaaaccttactcacggtttca 38886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 39322 - 39250
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || |||||| |||| ||| | |||||||||||||| ||||||| ||||||||||    
T  39322 caaaaccattagacaattattttggtttcacattgaaaattatcaaaaccattaaaccatacgtatggtttca 39250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 47; Significance: 7e-18; HSPs: 4)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 51568 - 51622
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  51568 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 51622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 51574 - 51623
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttc 121  Q
    |||||| ||||| || |||||||||||||||| |||||||||||||||||    
T  51574 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttc 51623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 51430 - 51484
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  51430 ttattttggtttctcatataagactatcaaaaccattaaaccataattatggttt 51484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 51414 - 51486
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || ||||||  |||| || |||||||||||||||| |||||| |||||||||||    
T  51414 caaaaccattagacaattattttggtttctcatataagactatcaaaaccattaaaccataattatggtttca 51486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 47; Significance: 7e-18; HSPs: 10)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 22664 - 22610
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  22664 ttatcttggtttcacatacaatactatcaaaaccattaaaccatacttatggttt 22610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 16182 - 16128
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  16182 ttattttggtttcacatacaatactatcaaaaccattaaaccatacttatggttt 16128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 22860 - 22806
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  22860 ttattttggtttcacatacaatactatcaaaatcattaaaccatacttatggttt 22806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 22764 - 22720
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccata 67  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  22764 ttatcttggtttcacatacaatactatcaaaaccattaaaccata 22720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 16176 - 16126
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  16176 tggtttcacatacaatactatcaaaaccattaaaccatacttatggtttca 16126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 22658 - 22608
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  22658 tggtttcacatacaatactatcaaaaccattaaaccatacttatggtttca 22608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 16571 - 16519
Alignment:
Q  25 atcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||| ||||  || ||||| |||||||||||||||||||||||||||    
T  16571 atcttggtttcacatttaatactattaaaaccattaaaccatacttatggttt 16519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 22854 - 22804
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||| ||||| ||||||||||||||||||    
T  22854 tggtttcacatacaatactatcaaaatcattaaaccatacttatggtttca 22804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 16590 - 16517
Alignment:
Q  49 tcaaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||||||||| || ||| |  |||||| ||||  || ||||| |||||||||| ||||||||||||||||||    
T  16590 tcaaaaccattacacaataatcttggtttcacatttaatactattaaaaccattaaaccatacttatggtttca 16517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 77
Target Start/End: Complemental strand, 22931 - 22902
Alignment:
Q  48 atcaaaaccattaaaccatacttatggttt 77  Q
    ||||||||||||||||||||||||||||||    
T  22931 atcaaaaccattaaaccatacttatggttt 22902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 47; Significance: 7e-18; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 119411 - 119465
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  119411 ttatcttggtttcacatacaagactatcaaaaccattaaaccatacttatggttt 119465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 119417 - 119467
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  119417 tggtttcacatacaagactatcaaaaccattaaaccatacttatggtttca 119467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 119273 - 119327
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  119273 ttattttggtttctcatataagactatcaaaaccattaaaccataattatggttt 119327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 119257 - 119329
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || ||||||  |||| || |||||||||||||||| |||||| |||||||||||    
T  119257 caaaaccattagacaattattttggtttctcatataagactatcaaaaccattaaaccataattatggtttca 119329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 45; Significance: 1e-16; HSPs: 6)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 24 - 96
Alignment:
Q  50 caaaaccattaaaccatacttatggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||| || ||  || |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  24 caaaaccattagacaattattttggtttcacatagaacactatcaaaaccattaaaccatacttatggtttca 96  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 40 - 94
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||| ||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  40 ttattttggtttcacatagaacactatcaaaaccattaaaccatacttatggttt 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 805 - 858
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  805 ttatcttggtttcacatacaagactatcaaaaccatt-aaccatacttatggttt 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 696 - 746
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatg 73  Q
    |||||||||||| |||||||| ||||| |||| |||||||| |||||||||    
T  696 ttatcttggtttgacatacaagactataaaaaacattaaacgatacttatg 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 811 - 860
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  811 tggtttcacatacaagactatcaaaaccatta-accatacttatggtttca 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 450 - 482
Alignment:
Q  45 actatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||||| ||||||||||||||||||    
T  450 actatcaaaaccatgaaaccatacttatggttt 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 7199 - 7145
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  7199 ttatcttggtttcacatacaagactatcaaaacaattaaaccatacttatggttt 7145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 7193 - 7143
Alignment:
Q  72 tggttttacatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    |||||| ||||| || ||||||||||| |||| ||||||||||||||||||    
T  7193 tggtttcacatacaagactatcaaaacaattaaaccatacttatggtttca 7143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 6401 - 6444
Alignment:
Q  79 acatagaacactatcaaaaccattacaccatacttatggtttca 122  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  6401 acatagaacactatcaaaaccattaaaccatacttatggtttca 6444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 6401 - 6442
Alignment:
Q  36 acatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  6401 acatagaacactatcaaaaccattaaaccatacttatggttt 6442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 209535 - 209589
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatggttt 77  Q
    |||||||||||| |||||||| | ||||||||||||||||| |||||||||||||    
T  209535 ttatcttggtttcacatacaagattatcaaaaccattaaactatacttatggttt 209589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 450410 - 450460
Alignment:
Q  23 ttatcttggttttacatacaaaactatcaaaaccattaaaccatacttatg 73  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  450410 ttatcttggtttcacatacaagactatcaaaaccattaaatcatacttatg 450460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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