View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2395_low_2 (Length: 383)
Name: NF2395_low_2
Description: NF2395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2395_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 28 - 365
Target Start/End: Complemental strand, 7947867 - 7947530
Alignment:
| Q |
28 |
aagcatccatatggcaatttgtgccttccaactattacaccgtttatgtcttgaaggtgatatttgactagcaagtagtatacaagtacaagcttgaaat |
127 |
Q |
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| T |
7947867 |
aagcatccatatggcaatttgtgccttccaactattacaccgtttatgtcttgaaggtgatatttgactagcaagtagtatacaagtacaagcttgaaat |
7947768 |
T |
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| Q |
128 |
agcatgcaaatgcatgttcttcttctcatatgtcatatcatatcccatcaataatatcttaagattcaacttacaaagcataaaaggttgagaaatcaat |
227 |
Q |
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| T |
7947767 |
agcatgcaaatgcatgttcttcttctcaaatgccatatcatatcccatcaataatatcttaagattcaacttacaaagcataaaaggttgagaaatcaat |
7947668 |
T |
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| Q |
228 |
taaaataataattagtgaagggaaaccaaacaacatatggaatcaagtatgagagtcgttatattaaatcagacaatatggatttggccaaccatacaat |
327 |
Q |
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| T |
7947667 |
taaaataataattagtgaagggaaaccaaacaacatatggaatcaagtatgagagtcgttatattaaatcagacaatatggatttggccaaccatacaat |
7947568 |
T |
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| Q |
328 |
aagctacttttacattaacaaattatgcaatccatttc |
365 |
Q |
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| T |
7947567 |
aagctacttttacattaacaaattatgcaatccatttc |
7947530 |
T |
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