View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2396_high_16 (Length: 259)
Name: NF2396_high_16
Description: NF2396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2396_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 45545834 - 45546066
Alignment:
| Q |
18 |
gtttgtgttgctcttattgttgtcatcttattgtttatttgttgtggatttcagatttagttggagttgttaagaatgtgtcttcaaccatgagcatccg |
117 |
Q |
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| T |
45545834 |
gtttgtgttgctcttattgttgtcatcttattgtttatttgttgtggatttcagatttagttggagttgttaagaatgtgtcttcaaccatgagcatccg |
45545933 |
T |
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| Q |
118 |
aagaaagagcaacaatgagactgttccaaagcgtgacattactattgccgatgaaacgttagtgttttcgattctcttttacagtgttaggcaagtgttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
45545934 |
tagaaagagcaacaatgagactgttccaaagcgtgacattactattgccgatgaaacgttagtgttttcgattctcttttacagtgttaggcaagtg-tt |
45546032 |
T |
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| Q |
218 |
attttataatgnnnnnnngatcaatccctatgct |
251 |
Q |
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| T |
45546033 |
attttataatgtgtttttgatcaatccctatgct |
45546066 |
T |
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