View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2396_high_22 (Length: 235)
Name: NF2396_high_22
Description: NF2396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2396_high_22 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 4032029 - 4031829
Alignment:
| Q |
14 |
caaaggaagaaagagggtagtaggtacctctccaaaaaggtgagaccccagaatttggtttggaataaatttgcaacctttgagtttcaagtggtaattt |
113 |
Q |
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| T |
4032029 |
caaaggaagaaagagggtagtaggtacctctccaaaaaggtgagaccccagaatttggtttggaataaatttgcaacctttgagtttcaagtggtaattt |
4031930 |
T |
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| Q |
114 |
tgattcccctgaggccattgccgtgagatcaagcatttgttccaatgaaagacaacgtgtgtgcgatgacttcagtactcgtgtttttcaagtatccctc |
213 |
Q |
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| T |
4031929 |
tgattcccctgaggccattgccgtgagatcaagcatttgttccaatgaaagacaacgtgtgtgcgatgacttcagtactcgtgtttttcaagtatccctc |
4031830 |
T |
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| Q |
214 |
t |
214 |
Q |
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| T |
4031829 |
t |
4031829 |
T |
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