View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2398_high_6 (Length: 208)

Name: NF2398_high_6
Description: NF2398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2398_high_6
NF2398_high_6
[»] chr3 (63 HSPs)
chr3 (1-198)||(53092671-53092868)
chr3 (1-198)||(46308855-46309052)
chr3 (1-198)||(46310280-46310477)
chr3 (1-198)||(38193354-38193551)
chr3 (1-198)||(3150300-3150497)
chr3 (1-198)||(7883376-7883573)
chr3 (1-198)||(41979196-41979393)
chr3 (1-198)||(46609197-46609394)
chr3 (1-198)||(53187790-53187987)
chr3 (3-198)||(35903875-35904070)
chr3 (1-198)||(46611147-46611344)
chr3 (1-198)||(53094117-53094314)
chr3 (1-198)||(54899918-54900115)
chr3 (5-199)||(44795733-44795927)
chr3 (1-198)||(2661752-2661949)
chr3 (1-198)||(28626459-28626656)
chr3 (1-198)||(2378827-2379024)
chr3 (1-198)||(54412391-54412588)
chr3 (1-198)||(611066-611263)
chr3 (6-199)||(21350448-21350641)
chr3 (1-194)||(38191943-38192124)
chr3 (2-198)||(46113949-46114145)
chr3 (7-198)||(17516817-17517008)
chr3 (6-197)||(42282318-42282509)
chr3 (6-198)||(44268034-44268226)
chr3 (1-198)||(23291618-23291814)
chr3 (2-198)||(30598386-30598582)
chr3 (1-197)||(51686239-51686435)
chr3 (28-198)||(27897225-27897395)
chr3 (3-200)||(43766889-43767086)
chr3 (5-196)||(48829408-48829599)
chr3 (1-72)||(19987619-19987690)
chr3 (3-72)||(3152243-3152312)
chr3 (3-42)||(44794257-44794296)
chr3 (1-42)||(2660260-2660301)
chr3 (1-42)||(41977798-41977839)
chr3 (151-198)||(2661718-2661765)
chr3 (151-198)||(3150484-3150531)
chr3 (39-94)||(24846494-24846548)
chr3 (151-198)||(53187974-53188021)
chr3 (152-198)||(53092856-53092902)
chr3 (1-42)||(2226207-2226248)
chr3 (1-58)||(33051451-33051508)
chr3 (1-42)||(35905767-35905808)
chr3 (1-42)||(53190814-53190855)
chr3 (1-42)||(54898485-54898526)
chr3 (2-42)||(30599973-30600013)
chr3 (16-72)||(40963370-40963426)
chr3 (151-198)||(28626643-28626690)
chr3 (151-198)||(38193320-38193367)
chr3 (151-198)||(44795700-44795747)
chr3 (151-198)||(46309039-46309086)
chr3 (151-198)||(46310246-46310293)
chr3 (151-198)||(46609381-46609428)
chr3 (151-198)||(53094083-53094130)
chr3 (1-42)||(21348771-21348812)
chr3 (1-42)||(23774200-23774241)
chr3 (1-42)||(27899136-27899177)
chr3 (1-58)||(37865432-37865489)
chr3 (1-58)||(45897098-45897155)
chr3 (6-42)||(17515363-17515399)
chr3 (16-72)||(30501180-30501236)
chr3 (2-42)||(45898383-45898423)
[»] chr6 (30 HSPs)
chr6 (3-198)||(32518341-32518536)
chr6 (1-198)||(3480501-3480698)
chr6 (1-198)||(18644948-18645145)
chr6 (1-181)||(32454296-32454476)
chr6 (3-198)||(20525178-20525373)
chr6 (1-198)||(11357040-11357235)
chr6 (36-198)||(32437210-32437372)
chr6 (7-197)||(9399880-9400070)
chr6 (2-198)||(13610739-13610925)
chr6 (9-179)||(33267117-33267287)
chr6 (1-197)||(6902743-6902938)
chr6 (1-197)||(10569764-10569960)
chr6 (9-197)||(21068681-21068869)
chr6 (1-197)||(7051090-7051286)
chr6 (16-197)||(21091157-21091338)
chr6 (2-169)||(7371224-7371391)
chr6 (9-197)||(21045366-21045554)
chr6 (37-150)||(14337750-14337862)
chr6 (1-72)||(3456796-3456867)
chr6 (1-72)||(13613587-13613658)
chr6 (1-72)||(32455896-32455967)
chr6 (151-198)||(18644914-18644961)
chr6 (151-198)||(32518307-32518354)
chr6 (1-66)||(17950609-17950674)
chr6 (1-42)||(32439126-32439167)
chr6 (9-72)||(33276857-33276917)
chr6 (1-42)||(3018467-3018508)
chr6 (1-42)||(7372993-7373034)
chr6 (1-42)||(20523414-20523455)
chr6 (6-42)||(9398713-9398749)
[»] chr8 (54 HSPs)
chr8 (1-198)||(27692681-27692878)
chr8 (1-198)||(33761117-33761314)
chr8 (1-198)||(38548675-38548872)
chr8 (2-198)||(13283839-13284035)
chr8 (3-198)||(13106854-13107049)
chr8 (1-198)||(8608285-8608483)
chr8 (1-198)||(29237199-29237396)
chr8 (1-198)||(29239031-29239228)
chr8 (1-198)||(33707254-33707451)
chr8 (1-198)||(35509262-35509459)
chr8 (1-198)||(35510663-35510860)
chr8 (1-198)||(601548-601745)
chr8 (1-198)||(42943270-42943467)
chr8 (1-180)||(15308123-15308302)
chr8 (1-180)||(15488492-15488671)
chr8 (1-199)||(27404258-27404456)
chr8 (1-198)||(33762561-33762754)
chr8 (6-198)||(22273735-22273927)
chr8 (1-197)||(26238774-26238970)
chr8 (7-179)||(5037927-5038097)
chr8 (2-197)||(3152006-3152201)
chr8 (4-197)||(43261984-43262175)
chr8 (1-197)||(41823938-41824134)
chr8 (6-169)||(41040773-41040936)
chr8 (1-179)||(13484593-13484770)
chr8 (9-94)||(15562480-15562564)
chr8 (9-154)||(17807075-17807220)
chr8 (11-151)||(29694208-29694348)
chr8 (1-72)||(9672025-9672096)
chr8 (1-72)||(27691202-27691273)
chr8 (1-72)||(33708829-33708900)
chr8 (1-42)||(13108391-13108432)
chr8 (1-42)||(38547276-38547317)
chr8 (2-72)||(15305846-15305916)
chr8 (2-72)||(15486215-15486285)
chr8 (151-197)||(27692648-27692694)
chr8 (1-42)||(8609842-8609883)
chr8 (1-42)||(13282526-13282567)
chr8 (9-73)||(9186616-9186680)
chr8 (151-198)||(601514-601561)
chr8 (16-91)||(12515147-12515222)
chr8 (151-198)||(29238997-29239044)
chr8 (151-198)||(33761301-33761348)
chr8 (151-198)||(33762527-33762574)
chr8 (151-198)||(35509446-35509493)
chr8 (151-198)||(35510629-35510676)
chr8 (1-42)||(22272384-22272425)
chr8 (1-42)||(33750419-33750460)
chr8 (1-58)||(40019204-40019261)
chr8 (1-42)||(41825699-41825740)
chr8 (1-58)||(42894824-42894881)
chr8 (31-91)||(11719525-11719585)
chr8 (166-198)||(27404457-27404489)
chr8 (2-42)||(41042639-41042679)
[»] chr7 (46 HSPs)
chr7 (1-198)||(35403463-35403660)
chr7 (1-198)||(35402017-35402214)
chr7 (2-180)||(27664479-27664657)
chr7 (1-198)||(20479563-20479760)
chr7 (3-198)||(37113991-37114186)
chr7 (2-195)||(13169530-13169723)
chr7 (31-198)||(29994955-29995122)
chr7 (1-198)||(77858-78055)
chr7 (1-198)||(39857693-39857890)
chr7 (1-197)||(47384342-47384538)
chr7 (5-198)||(6605241-6605434)
chr7 (7-198)||(34775052-34775243)
chr7 (7-163)||(48227820-48227976)
chr7 (1-198)||(24226629-24226826)
chr7 (9-198)||(35691483-35691672)
chr7 (7-151)||(46437161-46437305)
chr7 (5-184)||(45361134-45361313)
chr7 (9-197)||(37791710-37791898)
chr7 (1-198)||(22211617-22211803)
chr7 (1-194)||(22155706-22155888)
chr7 (1-199)||(23904631-23904842)
chr7 (62-198)||(38472369-38472505)
chr7 (1-120)||(38549595-38549714)
chr7 (1-148)||(13039536-13039683)
chr7 (1-72)||(27666070-27666141)
chr7 (1-42)||(56378-56419)
chr7 (5-72)||(20478094-20478161)
chr7 (9-88)||(48311687-48311766)
chr7 (2-42)||(29996549-29996589)
chr7 (16-72)||(34785084-34785140)
chr7 (151-198)||(29995109-29995156)
chr7 (3-42)||(6602385-6602424)
chr7 (27-70)||(7403785-7403828)
chr7 (151-198)||(35403429-35403476)
chr7 (143-198)||(46437825-46437880)
chr7 (1-75)||(35344292-35344366)
chr7 (1-58)||(4321086-4321143)
chr7 (2-75)||(8423283-8423356)
chr7 (1-42)||(24228444-24228485)
chr7 (1-58)||(30108613-30108670)
chr7 (9-58)||(33775464-33775513)
chr7 (5-42)||(34776950-34776987)
chr7 (1-42)||(38474178-38474219)
chr7 (1-58)||(45465170-45465227)
chr7 (2-42)||(39859264-39859304)
chr7 (2-58)||(46810754-46810810)
[»] chr4 (47 HSPs)
chr4 (1-198)||(43507215-43507412)
chr4 (1-198)||(43508497-43508694)
chr4 (1-198)||(51013730-51013927)
chr4 (5-198)||(33265854-33266047)
chr4 (1-198)||(4173584-4173781)
chr4 (1-198)||(319321-319518)
chr4 (7-198)||(320744-320935)
chr4 (7-198)||(43520953-43521144)
chr4 (1-180)||(33264430-33264609)
chr4 (1-198)||(5439491-5439688)
chr4 (1-198)||(833271-833468)
chr4 (1-198)||(5437859-5438056)
chr4 (2-198)||(834886-835082)
chr4 (7-198)||(20493881-20494072)
chr4 (1-198)||(35401797-35401994)
chr4 (1-194)||(39345612-39345805)
chr4 (1-198)||(49524577-49524774)
chr4 (1-143)||(4169734-4169876)
chr4 (9-197)||(54387728-54387915)
chr4 (1-179)||(42982315-42982493)
chr4 (1-197)||(48645303-48645499)
chr4 (9-179)||(11254175-11254344)
chr4 (9-150)||(20820041-20820176)
chr4 (9-146)||(2691429-2691566)
chr4 (139-198)||(4172298-4172357)
chr4 (1-72)||(43519472-43519543)
chr4 (39-102)||(41759492-41759555)
chr4 (151-198)||(43520919-43520966)
chr4 (1-153)||(230484-230635)
chr4 (151-198)||(320710-320757)
chr4 (151-198)||(833455-833502)
chr4 (151-198)||(834852-834899)
chr4 (151-198)||(4173550-4173597)
chr4 (151-198)||(5438043-5438090)
chr4 (51-102)||(11642016-11642067)
chr4 (151-198)||(33264615-33264662)
chr4 (151-198)||(33265820-33265867)
chr4 (151-198)||(43507399-43507446)
chr4 (151-198)||(43508463-43508510)
chr4 (166-199)||(319520-319553)
chr4 (16-149)||(26397819-26397952)
chr4 (1-58)||(39922993-39923050)
chr4 (1-66)||(42879323-42879388)
chr4 (1-42)||(49523172-49523213)
chr4 (16-72)||(25995084-25995140)
chr4 (2-58)||(27626714-27626770)
chr4 (28-72)||(37481034-37481078)
[»] chr1 (49 HSPs)
chr1 (1-198)||(26223635-26223832)
chr1 (3-198)||(37345806-37346001)
chr1 (1-198)||(27089123-27089320)
chr1 (1-198)||(46582058-46582255)
chr1 (1-198)||(4854458-4854655)
chr1 (7-198)||(25276796-25276987)
chr1 (1-198)||(8167990-8168186)
chr1 (1-198)||(34776617-34776814)
chr1 (2-198)||(1444025-1444221)
chr1 (1-198)||(8169412-8169609)
chr1 (1-198)||(47011504-47011701)
chr1 (1-198)||(9120087-9120284)
chr1 (1-198)||(33599266-33599463)
chr1 (1-198)||(2870920-2871117)
chr1 (2-194)||(31236868-31237060)
chr1 (26-198)||(45044993-45045165)
chr1 (6-198)||(51894620-51894812)
chr1 (5-198)||(3011907-3012100)
chr1 (1-197)||(52641936-52642132)
chr1 (1-198)||(50554211-50554408)
chr1 (5-197)||(37087981-37088173)
chr1 (9-194)||(23577692-23577882)
chr1 (23-169)||(6816906-6817053)
chr1 (119-198)||(20944934-20945013)
chr1 (1-72)||(47013087-47013158)
chr1 (1-42)||(4856001-4856042)
chr1 (1-42)||(34778173-34778214)
chr1 (2-42)||(46583591-46583631)
chr1 (1-72)||(9121673-9121744)
chr1 (1-42)||(33602679-33602720)
chr1 (9-58)||(51123541-51123590)
chr1 (151-198)||(37345772-37345819)
chr1 (152-198)||(27089089-27089135)
chr1 (2-72)||(51896157-51896227)
chr1 (9-58)||(6577091-6577140)
chr1 (2-42)||(27087332-27087372)
chr1 (2-42)||(31238530-31238570)
chr1 (151-198)||(8168173-8168220)
chr1 (151-198)||(8169378-8169425)
chr1 (151-198)||(25276974-25277021)
chr1 (151-198)||(25277008-25277055)
chr1 (151-198)||(26223819-26223866)
chr1 (16-91)||(35009625-35009700)
chr1 (36-94)||(3369513-3369571)
chr1 (1-42)||(3013511-3013552)
chr1 (1-58)||(5784853-5784910)
chr1 (5-42)||(15104493-15104530)
chr1 (1-42)||(52643650-52643691)
chr1 (2-58)||(35478136-35478192)
[»] chr5 (40 HSPs)
chr5 (2-198)||(21842836-21843032)
chr5 (1-198)||(40782055-40782252)
chr5 (1-198)||(7269290-7269487)
chr5 (3-198)||(17577779-17577974)
chr5 (1-198)||(29620186-29620383)
chr5 (1-177)||(2852934-2853110)
chr5 (5-198)||(12738580-12738773)
chr5 (5-198)||(12801403-12801596)
chr5 (1-198)||(42471596-42471793)
chr5 (1-199)||(28813608-28813806)
chr5 (1-198)||(30463948-30464145)
chr5 (1-184)||(8541129-8541312)
chr5 (1-184)||(28821948-28822131)
chr5 (7-199)||(32134285-32134482)
chr5 (1-170)||(34328695-34328868)
chr5 (124-198)||(24539933-24540007)
chr5 (32-142)||(27077367-27077477)
chr5 (9-154)||(41493900-41494045)
chr5 (1-72)||(40780598-40780669)
chr5 (1-72)||(29621786-29621857)
chr5 (1-42)||(24541247-24541288)
chr5 (9-72)||(1344786-1344849)
chr5 (151-198)||(17577745-17577792)
chr5 (151-198)||(24539994-24540041)
chr5 (1-42)||(17574366-17574407)
chr5 (1-58)||(32835924-32835981)
chr5 (147-198)||(2181540-2181591)
chr5 (1-72)||(42473612-42473683)
chr5 (3-42)||(43492133-43492172)
chr5 (152-198)||(21842802-21842848)
chr5 (1-42)||(2854362-2854402)
chr5 (1-42)||(7267891-7267932)
chr5 (1-42)||(18625043-18625084)
chr5 (1-58)||(18726613-18726670)
chr5 (1-42)||(18728637-18728678)
chr5 (1-58)||(32089911-32089968)
chr5 (1-58)||(33257746-33257803)
chr5 (1-42)||(34327683-34327724)
chr5 (1-42)||(36057648-36057689)
chr5 (1-42)||(38596916-38596957)
[»] chr2 (34 HSPs)
chr2 (1-198)||(24205646-24205843)
chr2 (1-198)||(40561722-40561919)
chr2 (1-198)||(16764456-16764652)
chr2 (1-198)||(14387397-14387594)
chr2 (1-198)||(2577324-2577521)
chr2 (1-198)||(37022029-37022226)
chr2 (1-175)||(6783412-6783586)
chr2 (1-198)||(19906730-19906927)
chr2 (1-198)||(39663202-39663397)
chr2 (10-198)||(42517614-42517802)
chr2 (1-198)||(16376784-16376981)
chr2 (1-198)||(39456624-39456821)
chr2 (1-198)||(6799251-6799449)
chr2 (2-197)||(19581463-19581658)
chr2 (31-198)||(17697953-17698120)
chr2 (9-154)||(37646366-37646511)
chr2 (3-198)||(34400364-34400553)
chr2 (9-149)||(31474972-31475113)
chr2 (9-150)||(161967-162108)
chr2 (1-72)||(14389109-14389180)
chr2 (1-72)||(24208067-24208138)
chr2 (2-72)||(37020557-37020627)
chr2 (1-42)||(16763124-16763165)
chr2 (1-42)||(40560271-40560312)
chr2 (151-198)||(6783587-6783634)
chr2 (17-72)||(6786006-6786061)
chr2 (151-198)||(16764422-16764469)
chr2 (151-198)||(24205830-24205877)
chr2 (1-58)||(41128-41185)
chr2 (1-42)||(2766982-2767023)
chr2 (1-58)||(11021581-11021638)
chr2 (9-58)||(17948913-17948962)
chr2 (1-58)||(28248161-28248218)
chr2 (2-42)||(19908301-19908341)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-198)||(54102-54299)
[»] scaffold1712 (1 HSPs)
scaffold1712 (1-198)||(1030-1227)
[»] scaffold0345 (1 HSPs)
scaffold0345 (1-198)||(1401-1596)
[»] scaffold0058 (5 HSPs)
scaffold0058 (62-198)||(7081-7217)
scaffold0058 (1-92)||(14293-14384)
scaffold0058 (2-42)||(3343-3383)
scaffold0058 (2-42)||(4515-4555)
scaffold0058 (151-198)||(7047-7094)
[»] scaffold0004 (1 HSPs)
scaffold0004 (2-197)||(106717-106903)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 3e-96; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 53092671 - 53092868
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  53092671 cgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 53092770  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53092771 gtaacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 53092868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 46308855 - 46309052
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  46308855 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgt 46308954  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  46308955 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 46309052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 46310477 - 46310280
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||    
T  46310477 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggtctgttaacggaggtgacgt 46310378  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  46310377 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 46310280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 38193551 - 38193354
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| |    
T  38193551 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttggtctgttaacggaggtgacat 38193452  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  38193451 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 38193354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 3150300 - 3150497
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | |||||    
T  3150300 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggatgtgacgt 3150399  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  3150400 gtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggagaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 3150497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 7883376 - 7883573
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  7883376 cgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 7883475  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7883476 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 7883573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 41979393 - 41979196
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  41979393 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatttcaatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgt 41979294  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  41979293 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcgaggaccaaattgatg 41979196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 46609197 - 46609394
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||    
T  46609197 cgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctacgttaagttggtttgttaatggaggtgacgt 46609296  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  46609297 gtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 46609394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 53187790 - 53187987
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||| |||||    
T  53187790 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttgatctggtaacggaggtgacgt 53187889  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  53187890 gtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggagaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 53187987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 35903875 - 35904070
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||    
T  35903875 tccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgt 35903974  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35903975 aacgttaacctctgacaaagcttaccacatcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 35904070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 46611344 - 46611147
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  46611344 cgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgt 46611245  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||| |||||||||    
T  46611244 gtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcaaggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 46611147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 53094314 - 53094117
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  53094314 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatgagtccctccgttaagttggtctgttaacggaggtgacgt 53094215  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| || ||| |||||||||    
T  53094214 gtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagtgaccaaactgattgattcacacaaaatttcgaaggacgaaattgatg 53094117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 54900115 - 54899918
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  54900115 cgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgt 54900016  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  54900015 gtaacgttaacgtctgacaaagcttaccacgtcaaatgccacgcaagcagagaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 54899918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 44795927 - 44795733
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||| |||||| ||||| ||||||| |    
T  44795927 cctgaattttgcgaaatatcaaattagtccatgaatttacaaaatatcaaacaaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaa 44795828  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatga 199  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  44795827 cgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggatcaaactgattgatttacacaaaatttccaaggaccaaattgatga 44795733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 2661949 - 2661752
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||||    
T  2661949 cgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacagaggtgacgt 2661850  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  2661849 gtaacgttaacctctgacaaagcttaccacgtcatatgccatgcaagcagggaccaaactaattgatttacacaaaatttccaaggaccaaattgatg 2661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 28626459 - 28626656
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||    
T  28626459 cgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgt 28626558  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||| |||||||||    
T  28626559 gtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaatttcgaaggactaaattgatg 28626656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 2379024 - 2378827
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||| ||||| | | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2379024 cgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgt 2378925  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || | |||||| ||| ||| || ||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||    
T  2378924 gtaatgttaacatcttacatagcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttaaagaaaattgccaatgaccaaattgatg 2378827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 54412588 - 54412391
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  54412588 cgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtgtgttaacggaggtgacgt 54412489  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||| | |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  54412488 gtaacgttaaccttttacaatgcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 54412391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 611263 - 611066
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||| | | |||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  611263 cgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgt 611164  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||| ||| |||||||||    
T  611163 gtaacgttaacctcttacaaggtttaccacgttagatgccacgcaagcagggatcaaattgattgatttacagaaaattgccaaggactaaattgatg 611066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 21350641 - 21350448
Alignment:
Q  6 ctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcac 105  Q
    ||||||||||||||||| | | || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| ||    
T  21350641 ctgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgtcgtgtaac 21350542  T
Q  106 gttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatga 199  Q
    |||||||||| |||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||  |||||||||||||    
T  21350541 gttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaagaaccaaattgatga 21350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 38191943 - 38192124
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |    
T  38191943 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacat 38192042  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaatt 194  Q
    |||||||||||||||||||||| |||            |||||||||||| |||||||||||||||||||||||||||||| || ||| |||||    
T  38192043 gtcacgttaacctctgacaaagctta------------ccacgcaagcagtgaccaaactgattgatttacacaaaatttcgaaggacgaaatt 38192124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 46114145 - 46113949
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    |||| |||||||||||||||||| | ||||||  |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  46114145 gtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgttaacggaggtgacgtg 46114046  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    | |||||||||||| |||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||  ||| ||| |||||||||    
T  46114045 taacgttaacctcttacaaggtttaccatgtcagatgccacgcaagcagagaccaaattgattgatttacagaaaattgtcaaggactaaattgatg 46113949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 17517008 - 17516817
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    ||||||||||||||||   | || |||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| |||    
T  17517008 tgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacg 17516909  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  17516908 ttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 17516817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 6 - 197
Target Start/End: Complemental strand, 42282509 - 42282318
Alignment:
Q  6 ctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcac 105  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||  || ||||||||||||||||||||||||| ||||||| |||| ||| |||  |    
T  42282509 ctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcattaaatcagtccctccgttaagttggtatgttaaccgaggtgacatgtacc 42282410  T
Q  106 gttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||    
T  42282409 gttaacctcttacaaggtttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 42282318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 6 - 198
Target Start/End: Original strand, 44268034 - 44268226
Alignment:
Q  6 ctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcac 105  Q
    ||||||||||||||||| | | || |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||    
T  44268034 ctgaattttgcgaaatagctattttgtccttgaatttataaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaac 44268133  T
Q  106 gttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||  |||| |||||||||||||| ||||||| |||||||||||||| || |||||||||| |||||| |||| |||||||||||||    
T  44268134 gttaacctcctacaaggtttaccacgtcagttgccacgtaagcagggaccaaattggttgatttacagaaaattgccaaggaccaaattgatg 44268226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 23291618 - 23291814
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| || |||| |||||    
T  23291618 cgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttagtctgtt-acagaggtgacgt 23291716  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||| | ||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||||||  | | |||||||||||||    
T  23291717 gtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattaatttacagaaaattgtcgaggaccaaattgatg 23291814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 30598386 - 30598582
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||||||||||||| | | || |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  30598386 gtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaattagtccctccgttaagttggtatgttaacggaggtgacgtg 30598485  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    | ||||||| |||| |||| | || ||||||||||| |||||||||||| |||||||  |||||||||||| ||||||  |||||||||||||||||    
T  30598486 taacgttaaactcttacaaggcttgccacgtcagataccacgcaagcagagaccaaatagattgatttacagaaaattgtcaatgaccaaattgatg 30598582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 51686435 - 51686239
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||| |||||||||||||||  | |||||||  |||||||||||||||  |||||||||||||||| || |||||||| |||||||| ||| |||||    
T  51686435 cgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgttcatcaaatcagtccctctgtcaagttggtatgttaacgaaggtgacgt 51686336  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||  ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||    
T  51686335 gtaccgttaacctcttacaaagcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 51686239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 27897225 - 27897395
Alignment:
Q  28 ttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagtttac 127  Q
    |||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||  | ||||    
T  27897225 ttagtctctgaatttacaaaatatcaatcaaattagtccatccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatggcttac 27897324  T
Q  128 cacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  27897325 cacgtcagatgtcacgcaagtagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 27897395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 43767086 - 43766889
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    |||||||||||||| ||||| | | || |||| |||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| || ||||    
T  43767086 tccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcactccgttacgttggtctgttaacggaggtgatgtgt 43766987  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatgat 200  Q
     |||||||||||| | || | ||||||||||| ||| ||||||||||||||||||| ||||||||||||  ||||||  ||| |||||||||||||||    
T  43766986 aacgttaacctcttataaggcttaccacgtcaaatgtcacgcaagcagggaccaaattgattgatttacggaaaattgtcaaggaccaaattgatgat 43766889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 48829408 - 48829599
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||||||||||| | |||||||  | |||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| || ||||      
T  48829408 cctgaattttgcgaaatatctatttagtcctcggatttacaaaatgtccatcaaatcagtccctcggttaagttggtctgttaacggaggtgaagtgtac 48829507  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattga 196  Q
     |||||||||| |||| | ||||||||||||| | |||||||||| |||||||| ||||||||||||| ||||||  ||| |||||||||||    
T  48829508 tgttaacctcttacaaggcttaccacgtcagaggtcacgcaagcaaggaccaaattgattgatttacagaaaattgtcaaggaccaaattga 48829599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19987690 - 19987619
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||||||||||||||||||||||||||| |||||   | | ||| |||||||||||||||||||    
T  19987690 cgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgt 19987619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 3152312 - 3152243
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||||||||||||||||||||||||||   | | ||| |||||||| ||||||||||    
T  3152312 tccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgt 3152243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 44794257 - 44794296
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44794257 tccctgaattttgcgaaatatcaaattagtccctgaattt 44794296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2660260 - 2660301
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  2660260 cgtccctgaattttgcgaaatatcaaattagtccttgaattt 2660301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41977798 - 41977839
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  41977798 cgtccctgaatttggcgaaatatcaaattagtccctgaattt 41977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 2661765 - 2661718
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  2661765 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 2661718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 3150484 - 3150531
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  3150484 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 3150531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 24846548 - 24846494
Alignment:
Q  39 atttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggagg 94  Q
    |||| |||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  24846548 attttcaaaatgtcaattaaatcagtccctccgttaagttgg-atgttaacggagg 24846494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 53187974 - 53188021
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  53187974 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 53188021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 53092856 - 53092902
Alignment:
Q  152 gaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||    
T  53092856 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 53092902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2226248 - 2226207
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  2226248 cgtccctgaattttgcgaaatatctatttagtccctgaattt 2226207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33051508 - 33051451
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||||||| ||||||||| || ||||||||||||  ||||||||||||||    
T  33051508 cgtccctaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatgtcaatcaa 33051451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35905808 - 35905767
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  35905808 cgtccctgaattttgcgaaatatctatttagtccctgaattt 35905767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 53190855 - 53190814
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  53190855 cgtccctgaattttgcgaaatatctatttagtccctgaattt 53190814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 54898485 - 54898526
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  54898485 cgtccctgaattttgcgaaatatctatttagtccctgaattt 54898526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 30600013 - 30599973
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  30600013 gtccctgaattttgcgaaatatctatttagtccctgaattt 30599973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 40963426 - 40963370
Alignment:
Q  16 cgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||| ||| ||||||||||||||  |||||||||||||| | |||||||||||    
T  40963426 cgaaatatgaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccctccgt 40963370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 28626643 - 28626690
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  28626643 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 28626690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 38193367 - 38193320
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  38193367 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 38193320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 44795747 - 44795700
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| ||||  ||||||||||||||||||| |||||||||||||    
T  44795747 ggaccaaattgatgaatttacacaaaatttccaaggaccaaattgatg 44795700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 46309039 - 46309086
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  46309039 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 46309086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 46310293 - 46310246
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  46310293 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 46310246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 46609381 - 46609428
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  46609381 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 46609428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 53094130 - 53094083
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  53094130 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 53094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21348771 - 21348812
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||| |||||||||||||||||| | |||||||||||||||    
T  21348771 cgtccttgaattttgcgaaatatctatttagtccctgaattt 21348812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23774200 - 23774241
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||| |||| ||||||||||||| |||||||||||||||    
T  23774200 cgtccctcaattatgcgaaatatcaatttagtccctgaattt 23774241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27899177 - 27899136
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||| |||||||||||||||||| | |||||||||||||||    
T  27899177 cgtccttgaattttgcgaaatatctatttagtccctgaattt 27899136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37865432 - 37865489
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  37865432 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 37865489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45897098 - 45897155
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  45897098 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 45897155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 17515363 - 17515399
Alignment:
Q  6 ctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||| | |||||||||||||||    
T  17515363 ctgaattttgcgaaatatctatttagtccctgaattt 17515399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 30501180 - 30501236
Alignment:
Q  16 cgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||| ||||  ||||||||  |||||||||||||| | |||||||||||    
T  30501180 cgaaatatcaaaatagtttctgaatttgtaaaatgtcaatcaatttagtccctccgt 30501236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 45898423 - 45898383
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||| ||||||||||||| ||||||| |||||||    
T  45898423 gtccctgaattatgcgaaatatcaacttagtccttgaattt 45898383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 1e-92; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 32518536 - 32518341
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  32518536 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 32518437  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32518436 aatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 32518341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 3480698 - 3480501
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||    
T  3480698 cgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacggaggtgacgt 3480599  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  3480598 gtcacgttaatctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 3480501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 18645145 - 18644948
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |    
T  18645145 cgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacat 18645046  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  18645045 gtaacgttaacctctgacaaaacttaccacgttagatgtcacgcaagcagggaccaaactgatcgatttacacaaaatttccaaggaccaaattgatg 18644948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 32454296 - 32454476
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||    
T  32454296 cgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacggaggtgacgt 32454395  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 181  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32454396 gtcacgttaacctctaacaaagcttaccacgtcagatgccacgcaagcagagaccaaactgattgatttacacaaaatttc 32454476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 20525373 - 20525178
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    |||||||||||||| ||||| | | || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||     
T  20525373 tccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgc 20525274  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     |||||||||||| |||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  20525273 aacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgattgatttacagaacattgccaatgaccaaattgatg 20525178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 11357235 - 11357040
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||   |||||    
T  11357235 cgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgtcattcaaatcagtccctccgttaagttggtctgttaacgga--tgacgt 11357138  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||| | ||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  11357137 gtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 11357040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 32437210 - 32437372
Alignment:
Q  36 tgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagtttaccacgtcag 135  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||| ||||||||||||    
T  32437210 tgaatttacaaaatgccaatcaaatcaatccctccgttaagttggtatgttaacggagatgacgtgtaacgttaacctctgacaaagcttaccacgtcag 32437309  T
Q  136 atgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  32437310 ataccacgcaagcagggaccaaactgattgatttacacaacatttccgaggaccaaattgatg 32437372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 9400070 - 9399880
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| |||| ||||||| |||    
T  9400070 tgaattttgcgaaatatctaattagtccccgaatttacaaaatatcaatcaaatcagtctctccgttaagttggtctgttaacagaggtgacgtgtaacg 9399971  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||||||||| |||| | ||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||  ||| || |||||||||    
T  9399970 ttaacctcttacaaggcttaccacgttagatgccacgcaagcagggacctaattgattgatttacagaaaattgtcaaggatcaaattgat 9399880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 13610739 - 13610925
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  13610739 gtccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtg 13610837  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    | ||||||||| || |||| | ||||||||||||||| ||||||| |    ||||     ||||||||||| ||||||||||| |||||||||||||    
T  13610838 taacgttaaccccttacaaggcttaccacgtcagatgacacgcaaac----acca-----attgatttacaaaaaatttccaaggaccaaattgatg 13610925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 33267117 - 33267287
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||||||||||| | ||||| || ||||||| |||||||||||||||||||||| |||||||| ||||  |||||||||||| |||||||   |||    
T  33267117 aattttgcgaaatatctatttagttcccgaatttataaaatgtcaatcaaatcagtccttccgttaaattggcctgttaacggaggtgacgtgtagtgtt 33267216  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatt 179  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33267217 aacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacacaaaatt 33267287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 6902938 - 6902743
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||| ||||||||||| |||| | |||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||    
T  6902938 cgtccctaaattttgcgaa-tatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 6902840  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||  ||||||||||| ||||   ||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||  ||| ||| ||||||||    
T  6902839 gtaccgttaacctcttacaagacttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgtcaaggactaaattgat 6902743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 10569960 - 10569764
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||| ||||||| | |||||||  |||||||||||||||| ||||||||||||||||||| || ||||| |||||||||||| |||||    
T  10569960 cgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgtcaaattggtctgttaacggaggtgacgt 10569861  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||   |||||||||| ||   | |||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||| |||| ||||||||||||    
T  10569860 gtactgttaacctcttacgtggcttaccatgtcagatgccacgcaagcagggatcaaattgattgatttacagaaaattgccaaagaccaaattgat 10569764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 21068681 - 21068869
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||| ||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||   |||    
T  21068681 aattttacgaaatatctatttagtcctcgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtactgtt 21068780  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    || |||| |||| | ||||||||||||||  |||||||||| |||||||| ||||||||||| | |||||| |||| ||||||||||||    
T  21068781 aatctcttacaaggcttaccacgtcagatatcacgcaagcaaggaccaaattgattgatttatagaaaattgccaaggaccaaattgat 21068869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 7051286 - 7051090
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||| ||||||||||||||||||| | ||||| |  ||||||| ||||| || |  |||| ||||||||| |||||||||| |||||||||||| |||||    
T  7051286 cgtctctgaattttgcgaaatatctatttagtactcgaatttataaaatatccactaaattagtccctccattaagttggtctgttaacggaggtgacgt 7051187  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||   |||||||||| |||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||| || |||||||||    
T  7051186 gtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaacaaattgat 7051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 197
Target Start/End: Original strand, 21091157 - 21091338
Alignment:
Q  16 cgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctct 115  Q
    ||||||||| | |||||||| ||||||| |||||||||||||||||||||||||| |||||||||  |||||||||||| |||||||   ||||| ||||    
T  21091157 cgaaatatctatttagtccccgaatttataaaatgtcaatcaaatcagtccctccattaagttggcctgttaacggaggtgacgtgtactgttaatctct 21091256  T
Q  116 gacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
     |||| | ||||||||||||||| |||||||||| |||| ||| ||||||||||| | ||||||  ||| ||||||||||||    
T  21091257 tacaaggcttaccacgtcagatgtcacgcaagcatggactaaattgattgatttatagaaaattgtcaaggaccaaattgat 21091338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 7371224 - 7371391
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    |||||||||||||||||||||   | || |||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||    
T  7371224 gtccctgaattttgcgaaatagatattttgtccttgaatttataaaatgtcaatcaaatcagtccctcctttaagttggtctgttaaaggaggtgacgtg 7371323  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgattt 169  Q
    | || ||||||||| | ||   |||||||||||||| |||||||||||||||||||| |||| |||||    
T  7371324 taacattaacctcttataagacttaccacgtcagataccacgcaagcagggaccaaattgatggattt 7371391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 21045366 - 21045554
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||| ||||||||| | |||||||| |||||||||||||||||||||||||||||| ||||||||||| |  || ||| ||||| |||||||   |||    
T  21045366 aattttacgaaatatctatttagtccccgaatttacaaaatgtcaatcaaatcagtccatccgttaagttagcctggtaatggaggtgacgtgtactgtt 21045465  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    || |||| |||| | ||||||||||||||  ||||||||||||||||||| |||||||||||   ||||||  ||| ||||||||||||    
T  21045466 aatctcttacaaggcttaccacgtcagatatcacgcaagcagggaccaaattgattgatttattaaaaattgtcaaggaccaaattgat 21045554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 14337750 - 14337862
Alignment:
Q  37 gaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagtttaccacgtcaga 136  Q
    ||||||||||||| |||||||||||||||||||| |||||||||  ||||||| |||| ||| |||    ||||||||| || ||| |||||| ||||||    
T  14337750 gaatttacaaaatatcaatcaaatcagtccctccattaagttggcctgttaacagaggtgacatgtactattaacctcttac-aagcttaccatgtcaga 14337848  T
Q  137 tgccacgcaagcag 150  Q
    || |||||||||||    
T  14337849 tgtcacgcaagcag 14337862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3456796 - 3456867
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  3456796 cgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 3456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13613658 - 13613587
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  13613658 cgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagtccctccgt 13613587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 32455967 - 32455896
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||||| |||||||||||||||||| ||||||||   | | ||| |||||||||||||||||||    
T  32455967 cgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtccatcaaatcagtccctccgt 32455896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 18644961 - 18644914
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  18644961 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 18644914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 32518354 - 32518307
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  32518354 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 32518307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17950609 - 17950674
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtcc 66  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  17950609 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagtcagtcc 17950674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32439167 - 32439126
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  32439167 cgtccctgaattttgcgaaatatctatttagtccctgaattt 32439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 33276857 - 33276917
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||||||| | ||||   ||||||||| |||||||||||||||||||| |||||||    
T  33276857 aattttgcgaaatatctatttag---ctgaatttataaaatgtcaatcaaatcagttcctccgt 33276917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3018508 - 3018467
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||| |||| ||||||||||||| |||||||||||||||    
T  3018508 cgtccctcaattatgcgaaatatcaacttagtccctgaattt 3018467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7373034 - 7372993
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  7373034 cgtccctgaattttgcgaaatatttatttagtccctgaattt 7372993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20523414 - 20523455
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||| |||||||||||||||||| | |||||||||||||||    
T  20523414 cgtccttgaattttgcgaaatatctatttagtccctgaattt 20523455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 9398713 - 9398749
Alignment:
Q  6 ctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||| | |||||||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattt 9398749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 27692878 - 27692681
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  27692878 cgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaattaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 27692779  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27692778 gtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 27692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 33761117 - 33761314
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  33761117 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 33761216  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  33761217 gttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 33761314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 38548872 - 38548675
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  38548872 cgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 38548773  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  38548772 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 38548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 13284035 - 13283839
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  13284035 gtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtg 13283936  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    | ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13283935 taacgttaacctctgacaaagcttatcacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 13283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 13106854 - 13107049
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||    
T  13106854 tccctgaattttgcgaaatatcaaattagtccctgaatttataaaatttcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgt 13106953  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13106954 aacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 13107049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 8608285 - 8608483
Alignment:
Q  1 cgtccctgaa-ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacg 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  8608285 cgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacg 8608384  T
Q  100 tgtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8608385 tgtaacgttaacctctgacaaagcttaccacgtcagatgcaacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 8608483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 29237199 - 29237396
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||    
T  29237199 cgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggtctgttaacggaggtgacgt 29237298  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||||    
T  29237299 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaaggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 29237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 29239228 - 29239031
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  29239228 cgtccctaaatttttcgaaatatcaaattagtccctgaatttacaaaatatcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgt 29239129  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  29239128 gtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 29239031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 33707254 - 33707451
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  33707254 cgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtcactccgttaagttggtctgttaacggaggtgacgt 33707353  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  33707354 gtaacgttaacctctgacaaagcttaccacgtcagatgtcaagcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 33707451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 35509262 - 35509459
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||| ||| |||||    
T  35509262 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttgacctgttaacgaaggtgacgt 35509361  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| |||||||||    
T  35509362 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacaaaaaatttcgaaggacgaaattgatg 35509459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 35510860 - 35510663
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  35510860 cgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 35510761  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  35510760 atcacgttaacctctgacaaagcttaacacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 35510663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 601745 - 601548
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  601745 cgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgt 601646  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     ||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||| || ||| |||||||||    
T  601645 ttcacgttaacctctgacaaagcttaccacgtcaaataccacgcaagcagggaccaaactgattgatttacagaaaatttcgaaggacgaaattgatg 601548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 42943467 - 42943270
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  42943467 cgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 42943368  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  42943367 gtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 42943270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 15308302 - 15308123
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||    
T  15308302 cgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccctccgttaagttggtctgttaacggaggtgacgt 15308203  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt 180  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  15308202 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttatacaaaattt 15308123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 15488671 - 15488492
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||    
T  15488671 cgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccctccgttaagttggtctgttaacggaggtgacgt 15488572  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt 180  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  15488571 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttatacaaaattt 15488492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27404258 - 27404456
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | |||||||||||| |||||||| |||||| |||||||||||||||| ||||||| |||||||||||| |||||||||||| |||||    
T  27404258 cgtccctgaattattcgaaatatcaaaatagtccctaaatttataaaatgtcaatcaaattagtcccttcgttaagttggtctgttaacggaggtgacgt 27404357  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatga 199  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  27404358 gtcacgttaacctctgacaaagcgtaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcgaatgactaaattgatga 27404456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 33762754 - 33762561
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  33762754 cgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgt 33762655  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||    ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || ||| |||||||||    
T  33762654 gtcacgttaacct----caaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgattcacacaaaatttcgaaggacgaaattgatg 33762561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 22273927 - 22273735
Alignment:
Q  6 ctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcac 105  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||    
T  22273927 ctgaattttgcaaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaac 22273828  T
Q  106 gttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||| |||| | ||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  22273827 gttaacctcttacaaggcttaccacgtcagatgtcacacaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 22273735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 26238774 - 26238970
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||| | |||||||  |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| || ||    
T  26238774 cgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgttaagttagtctgttaacggaggtgatgt 26238873  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||   |||||||||| |||| | ||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||| |||| ||||||||||||    
T  26238874 gtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcatggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 26238970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 7 - 179
Target Start/End: Complemental strand, 5038097 - 5037927
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | |    
T  5038097 tgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatg 5037998  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatt 179  Q
    ||||||||| |||| | |||||||||||||||||||||||  | |||||||| ||||||||||||| ||||||    
T  5037997 ttaacctcttacaaggcttaccacgtcagatgccacgcaa--atggaccaaattgattgatttacagaaaatt 5037927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 3152006 - 3152201
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    |||||||| |||| | ||||| | | ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||  || | ||| ||    
T  3152006 gtccctgagtttttcaaaatagctatttagtcccttaatttacaaaatgtcaatcaaattagtccctctgttaagttggtatgttaatagatgtgacatg 3152105  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    | | |||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||||||    
T  3152106 taatgttaacctcttacaaggtttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaatgactaaattgat 3152201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 43262175 - 43261984
Alignment:
Q  4 ccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtc 103  Q
    |||| |||||||||||||||| | |||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||  || ||| | |     
T  43262175 ccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtcaatcaaatcagtctctccgttaagttggtctgttaacg--ggtgacatcta 43262078  T
Q  104 acgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
     ||||||||||| |||||| |||||||||| |||| ||||||||||||||||||| |||||||||| || ||||||| ||| ||||||||||||    
T  43262077 ccgttaacctcttacaaagcttaccacgtctgatgtcacgcaagcagggaccaaattgattgattttcagaaaattttcaaagaccaaattgat 43261984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 41823938 - 41824134
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||||||||||| | |||||||  |||||||||||||||  |||||||||||||||||||||||||||| | |||||||||| ||| |    
T  41823938 cgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatcaaatcagtccctccgttaagttggtctattaacggaggtgactt 41824037  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||   |||||||||| |||  | ||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||| |||| || |||||||||    
T  41824038 gtacagttaacctcttacatggcttaccacgtcagaagccacgcaaacagggaccaaattgattgatttacataaaattgccaaggatcaaattgat 41824134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 169
Target Start/End: Original strand, 41040773 - 41040936
Alignment:
Q  6 ctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcac 105  Q
    ||||||||| | ||||| | | || |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| ||||||| ||    
T  41040773 ctgaattttccaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcggtccctccgttaagttggtctgttaacagaggtgacgtgtaac 41040872  T
Q  106 gttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgattt 169  Q
    ||| |||||| ||||   ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  41040873 gttgacctcttacaagacttaccacgtcagatgtcacgcaagcagggaccaaattgattgattt 41040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 13484593 - 13484770
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||    | || |||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||||| ||| |||||    
T  13484593 cgtccctgaattttgcgaaattgttattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctattaacgaaggtgacgt 13484692  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatt 179  Q
    |  |||||||||| | |||| | ||||||||||||||||||| ||||||||||||||| |||| ||||| || ||||||    
T  13484693 g-aacgttaaccttttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgatggattttcagaaaatt 13484770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 15562480 - 15562564
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggagg 94  Q
    |||||||  ||||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15562480 aattttgtaaaatatcaatttagttcc-gaatttataaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggagg 15562564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 17807075 - 17807220
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||| ||||||  | |||||||| |||||||||||| |||||||||| ||| |||||| |||||||||  |||||||||||| ||| |||   |||    
T  17807075 aattttgcaaaatatttatttagtccccgaatttacaaaacgtcaatcaaaccagaccctccattaagttggcctgttaacggaggtgacatgtactgtt 17807174  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggac 154  Q
    ||||||| |||| | |||| | |||||||| |||| ||||| ||||    
T  17807175 aacctcttacaaggcttacgatgtcagatgtcacgtaagcatggac 17807220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 29694348 - 29694208
Alignment:
Q  11 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaa 110  Q
    |||||| ||||||| | ||||| | | |||||  ||||| |||||||||||||| |||| |||||||| |  |||||||||||| || ||||    ||||    
T  29694348 ttttgcaaaatatctatttagttcttaaatttttaaaatatcaatcaaatcagttcctctgttaagttagcctgttaacggaggtgatgtgtactattaa 29694249  T
Q  111 cctctgacaaagtttaccacgtcagatgccacgcaagcagg 151  Q
    || || |||| ||||||||||||| ||||||||||||||||    
T  29694248 ccgcttacaaggtttaccacgtcatatgccacgcaagcagg 29694208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9672025 - 9672096
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||| |||||||||||||||||| | |||||||| ||||||||||||| ||||||||||| || |||||||    
T  9672025 cgtccatgaattttgcgaaatatctatttagtccccgaatttacaaaatttcaatcaaatcggttcctccgt 9672096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 27691202 - 27691273
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||   | | ||| |||||||| ||||||||||    
T  27691202 cgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgt 27691273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33708900 - 33708829
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||||||||| ||||||||||||||||||   ||| ||| |||||||| ||||||||||    
T  33708900 cgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgt 33708829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13108432 - 13108391
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13108432 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 13108391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38547276 - 38547317
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  38547276 cgtccatgaattttgcgaaatatcaaattagtccctgaattt 38547317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 15305846 - 15305916
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||| |  ||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  15305846 gtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 15305916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 15486215 - 15486285
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||| |  ||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  15486215 gtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 15486285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 27692694 - 27692648
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||    
T  27692694 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 27692648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8609883 - 8609842
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  8609883 cgtccctgaattttgcgaaatatctatttagtccctgaattt 8609842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13282526 - 13282567
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  13282526 cgtccctgaattttgcgaaatatctatttagtccctgaattt 13282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 9186680 - 9186616
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgtt 73  Q
    |||| ||||||||||||||||||||||| |||||   | ||||||||||| | ||||||||||||    
T  9186680 aattatgcgaaatatcaaattagtccctaaatttggcatatgtcaatcaatttagtccctccgtt 9186616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 601561 - 601514
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  601561 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 601514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 12515147 - 12515222
Alignment:
Q  16 cgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacgg 91  Q
    |||||||| ||| ||||| ||||||||  |||||||||||||| | |||||||||||| | ||||  |||||||||    
T  12515147 cgaaatattaaaatagtctctgaatttgtaaaatgtcaatcaatttagtccctccgttcaattggagtgttaacgg 12515222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 29239044 - 29238997
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  29239044 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 29238997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 33761301 - 33761348
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  33761301 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 33761348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 33762574 - 33762527
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  33762574 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 33762527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 35509446 - 35509493
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  35509446 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 35509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 35510676 - 35510629
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  35510676 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 35510629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22272384 - 22272425
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||| |||||| | |||||||||||||||    
T  22272384 cgtccctgaattttgcgtaatatctatttagtccctgaattt 22272425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33750460 - 33750419
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||| |||| ||||||||||||| |||||||||||||||    
T  33750460 cgtccctcaattatgcgaaatatcaacttagtccctgaattt 33750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40019204 - 40019261
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  40019204 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 40019261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41825740 - 41825699
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||| |||||||||||||||||| | |||||||||||||||    
T  41825740 cgtccttgaattttgcgaaatatctatttagtccctgaattt 41825699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42894824 - 42894881
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  42894824 cgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 42894881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 11719525 - 11719585
Alignment:
Q  31 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacgg 91  Q
    ||||||||||||   ||||||||||||||| |||| ||| ||||||||||  |||||||||    
T  11719525 gtccctgaatttgttaaatgtcaatcaaattagtctctctgttaagttggcatgttaacgg 11719585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 27404457 - 27404489
Alignment:
Q  166 atttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||| |||||||||||||    
T  27404457 atttacacaaaatttccaaggaccaaattgatg 27404489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 41042679 - 41042639
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  41042679 gtccctgaattttgtgaaatatctatttagtccctgaattt 41042639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 35403660 - 35403463
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  35403660 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggtatgttaacggaggtgacgt 35403561  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| |||||||||    
T  35403560 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattggtttacacaaaatttcgaaggacgaaattgatg 35403463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 35402017 - 35402214
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  35402017 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggtctgttaacggaggtgacgt 35402116  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||| |||||||||||||| | |||||||||||||||||||| |||||||||||||||| || ||| |||||||||    
T  35402117 gtcacgttaacctctgacaaagcttatcacgtcagatgccatgtaagcagggaccaaactgattaatttacacaaaatttcgaaggacgaaattgatg 35402214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 27664479 - 27664657
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  27664479 gtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtg 27664578  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt 180  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  27664579 taacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattaatttactcaaaattt 27664657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 20479760 - 20479563
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||||| |||||    
T  20479760 cgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgt 20479661  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||    
T  20479660 gtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatg 20479563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 37113991 - 37114186
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  37113991 tccctgaattttgcgaaatatctatttagtccctaaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 37114090  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     || ||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  37114091 aacattaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaatgatcaaattgatg 37114186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 13169723 - 13169530
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  13169723 gtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtg 13169624  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattg 195  Q
    | |||||||||||| |||  | ||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  13169623 taacgttaacctcttacatggcttaccacgttagatgtcacgcaagcagggaccaaattgattgatttacataaaattgccaatgaccaaattg 13169530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 29994955 - 29995122
Alignment:
Q  31 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagtttaccac 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||||||||||||| || ||||    
T  29994955 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctctgacaaagctttccac 29995054  T
Q  131 gtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29995055 gtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 29995122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 78055 - 77858
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||  || |    
T  78055 cgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgccaatcaaatcagtccctccgttaagttggtctgttaacagaggttacat 77956  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||  ||||||| |||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  77955 gtaacgttaaccttcgacaaagcttaccatgtcagatttcatgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 77858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 39857693 - 39857890
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||    
T  39857693 cgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaaccgaggtgacgt 39857792  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||  | ||||||||||||||| ||||||| ||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  39857793 gtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaaacagggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 39857890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 47384342 - 47384538
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |    
T  47384342 cgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacat 47384441  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    || |||||||||||| |||| | ||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||  ||| ||||||||||||    
T  47384442 gtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagtgaccaaattgattgatttacataaaattgtcaaggaccaaattgat 47384538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 6605434 - 6605241
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| | ||||||| |    
T  6605434 cctgaattttgcgaaatagctatttagtccctgaatttacaaaatgccaatcaaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaa 6605335  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||| |||| | ||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||  ||| |||||||||||||    
T  6605334 cgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggactaaattgattgatttacagaaaattgtcaaggaccaaattgatg 6605241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 34775052 - 34775243
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    |||||||||| ||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  34775052 tgaattttgcaaaatagctatttagtccctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacg 34775151  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||| |||    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||| ||| |||||||||    
T  34775152 ttaacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggactaaattgatg 34775243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 48227976 - 48227820
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    |||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| |||    
T  48227976 tgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacg 48227877  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgat 163  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||    
T  48227876 ttaacctcttacaatgcttaccacgtcagatgccacgcaagcagggaccaaattgat 48227820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 24226629 - 24226826
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||||||||| | | || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  24226629 cgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 24226728  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||| |||||| |||| | ||||||||||||||  ||| ||||||||||||||| ||||||||||| | ||||||  ||| |||||||||||||    
T  24226729 gtaacgttgacctcttacaaggcttaccacgtcagatatcacacaagcagggaccaaattgattgatttagagaaaattgtcaaggaccaaattgatg 24226826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 35691483 - 35691672
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||||||||| | | || |||| ||||||||||||||||||||||||||||||||| |  ||| ||||| |||||||||||| | ||||| |||||    
T  35691483 aattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcccttcactaaattggtctgttaacggaggtggcgtgtaacgtt 35691582  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||| |||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  35691583 aacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 35691672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 46437161 - 46437305
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    |||||||||||||||| | | || |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  46437161 tgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaaccaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacg 46437260  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagg 151  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||    
T  46437261 ttaacctcttacaaagcttaccacgtcagatgccacgcaggcagg 46437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 45361313 - 45361134
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||| |||||   | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |    
T  45361313 cctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaa 45361214  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaa 184  Q
    ||||||||||| |||  | ||||||||||||||| ||||||||||||||||||| ||||  |||| || |||||| ||||    
T  45361213 cgttaacctcttacatggcttaccacgtcagatgtcacgcaagcagggaccaaattgatgtattttcataaaattgccaa 45361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 37791710 - 37791898
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||| ||||||| | ||||||||| |||||  |||||||||||||||||| ||| ||| |||||||||  |||||||||||| |||||||  ||||    
T  37791710 aattttgccaaatatctatttagtccctaaatttttaaaatgtcaatcaaatcaatccatccattaagttggcatgttaacggaggtgacgtgtaccgtt 37791809  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    |||| || |||| | |||||||||||||||||| ||| |||||||||||| ||||||||||||| |||||| ||||  ||||| |||||    
T  37791810 aaccacttacaaggcttaccacgtcagatgccatgcaggcagggaccaaattgattgatttacaaaaaattgccaagaaccaacttgat 37791898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 22211803 - 22211617
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccg-ttaagttggtttgttaacggaggcgacg 99  Q
    ||||| |||||||||| ||||| | | || ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||    
T  22211803 cgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacg 22211704  T
Q  100 tgtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||| |||||||||||| |||| | |            |||||||||||||||||||||| | ||||||||||| |||||| |||| |||||||||||||    
T  22211703 tgtaacgttaacctcttacaaggct------------tgccacgcaagcagggaccaaattaattgatttacagaaaattgccaaggaccaaattgatg 22211617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 22155888 - 22155706
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccg-ttaagttggtttgttaacggaggcgacg 99  Q
    ||||| |||||||||| ||||| | | || ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||    
T  22155888 cgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacg 22155789  T
Q  100 tgtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaatt 194  Q
    ||| |||||||||||| |||| | |            |||||||||||||||||||||| | ||||||||||| |||||| |||| |||||||||    
T  22155788 tgtaacgttaacctcttacaaggct------------tgccacgcaagcagggaccaaattaattgatttacagaaaattgccaaggaccaaatt 22155706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23904631 - 23904842
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||| ||||||||||| ||||| | | ||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||  ||||| | ||| |||||    
T  23904631 cgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgtcaatcaaatcagtccctccattaagttagtccgttaaggaaggtgacgt 23904730  T
Q  101 gtcacgttaa--------------cctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatg 186  Q
    || |||||||              ||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||| ||| |    
T  23904731 gtaacgttaacctcttacaaggctcctcttacaaggtttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttatagaaaattt-caagg 23904829  T
Q  187 accaaattgatga 199  Q
    |||||||||||||    
T  23904830 accaaattgatga 23904842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 38472369 - 38472505
Alignment:
Q  62 agtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactg 161  Q
    |||| ||| ||||||||||| |||||||||||| ||||||| |||||||||||| |||| | || |||||||| ||||||||||| ||| ||||||| ||    
T  38472369 agtctctctgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacgtcaaatgccacgcaaacagagaccaaattg 38472468  T
Q  162 attgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||| ||||||  ||| |||||||||||||    
T  38472469 attgatttacagaaaattgtcaaggaccaaattgatg 38472505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 38549595 - 38549714
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||| |||||||| | ||| |||  |||||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||| |||||    
T  38549595 cgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgtccatcaaatcagtcccttcgttaagttggtctgttaacgaaggtgacgt 38549694  T
Q  101 gtcacgttaacctctgacaa 120  Q
    ||  ||||||||||| ||||    
T  38549695 gtaccgttaacctcttacaa 38549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13039683 - 13039536
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||| |||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||| |  ||||||||||  ||||||| |||| |||||    
T  13039683 cgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatcagtccatatgttaagttggcctgttaacagaggtgacgt 13039584  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagc 148  Q
     |  |||||||| || ||||   ||||||||| ||||| |||||||||    
T  13039583 ttaccgttaaccgcttacaagacttaccacgttagatgtcacgcaagc 13039536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27666141 - 27666070
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||| ||| |||||||| ||||||||||    
T  27666141 cgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgt 27666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 56378 - 56419
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  56378 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 56419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 20478094 - 20478161
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  20478094 cctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 20478161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 48311766 - 48311687
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaa 88  Q
    ||||||||||||| || ||||  |||||||||||| |||||| |||||||||  |||| ||||||||||||| |||||||    
T  48311766 aattttgcgaaatgtctaattcatccctgaatttataaaatggcaatcaaatttgtccgtccgttaagttgggttgttaa 48311687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 29996589 - 29996549
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29996589 gtccctgaattttgcgaaatatcaaattaatccctgaattt 29996549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 34785140 - 34785084
Alignment:
Q  16 cgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||| ||||||||||||||  |||||||||||||| | |||||||||||    
T  34785140 cgaaatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccctccgt 34785084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 29995109 - 29995156
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  29995109 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 29995156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 6602385 - 6602424
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  6602385 tccctgaattttgcgaaatatctatttagtccctgaattt 6602424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 7403828 - 7403785
Alignment:
Q  27 attagtccctgaatttacaaaatgtcaatcaaatcagtccctcc 70  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  7403828 attagtccctgaatttatcaaatgtcaatcaaattagtccctcc 7403785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 35403476 - 35403429
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  35403476 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 35403429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 46437825 - 46437880
Alignment:
Q  143 gcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||| ||||||||||||  |||||| | || |||||||||||||    
T  46437825 gcaagcagggaccaaattgattgatttactgaaaattgcaaaggaccaaattgatg 46437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35344366 - 35344292
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaa 75  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||| || | ||| ||||||   |||||||||||||    
T  35344366 cgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgttaa 35344292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4321086 - 4321143
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  4321086 cgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 4321143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 8423356 - 8423283
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaa 75  Q
    |||||| |||| ||||||||||||| ||| ||||||||||||  | | ||||||||||   |||||||||||||    
T  8423356 gtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtcaatcaaaaaggtccctccgttaa 8423283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24228485 - 24228444
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||| ||||||||    
T  24228485 cgtccctgaattttgcgaaatatctatttagtctctgaattt 24228444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30108613 - 30108670
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  30108613 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 30108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 33775464 - 33775513
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    |||| ||||||||||||| ||| ||||||||||||  |||||||||||||    
T  33775464 aattatgcgaaatatcaatttaatccctgaatttattaaatgtcaatcaa 33775513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 34776987 - 34776950
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  34776987 cctgaattttgcgaaatatctatttagtccctgaattt 34776950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38474219 - 38474178
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | ||||||| |||||||    
T  38474219 cgtccctgaattttgcgaaatatctatttagtccttgaattt 38474178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45465227 - 45465170
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  45465227 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 45465170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 39859304 - 39859264
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||| | ||||||| |||||||    
T  39859304 gtccctgaattttgcgaaatatctatttagtccttgaattt 39859264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 46810754 - 46810810
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    |||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  46810754 gtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 46810810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 5e-89; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 43507215 - 43507412
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  43507215 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggactgttaacggaggtgacgt 43507314  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  43507315 gtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 43507412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 43508694 - 43508497
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| |||||    
T  43508694 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacgaaggtgacgt 43508595  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  43508594 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 43508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 51013927 - 51013730
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  51013927 cgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 51013828  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  51013827 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattaatttacacaaaatttccaaggaccaaattgatg 51013730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 33266047 - 33265854
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||    
T  33266047 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttagtctgttaacggaggtgacgtgtca 33265948  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| |||||||||    
T  33265947 cgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacataaaatttcgaaggacgaaattgatg 33265854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 4173781 - 4173584
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||  |||||||||||| |||||    
T  4173781 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgtcaatcaactcagtccctccgttaagttggcctgttaacggaggtgacgt 4173682  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  4173681 gtcacgttaacatctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 4173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 319321 - 319518
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||||    
T  319321 cgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggtctgttaacagaggtgacgt 319420  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  319421 gtcacgttaacctctgacaaaacttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 319518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 320935 - 320744
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||  |||||||||||| |||||||||||    
T  320935 tgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtcaatcaactcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacg 320836  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  320835 ttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 320744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 43521144 - 43520953
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | |||||||| ||| ||||||| |||    
T  43521144 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagttcttccgttaagttgttctgttaacgtaggtgacgtgttacg 43521045  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  43521044 ttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 43520953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 33264430 - 33264609
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  33264430 cgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 33264529  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattt 180  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  33264530 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgtaagcatggaccaaactgattgatttacgcaaaattt 33264609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 5439688 - 5439491
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||    
T  5439688 cgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgt 5439589  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||| |||||||||    
T  5439588 gtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaatttcgaaggactaaattgatg 5439491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 833271 - 833468
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||    
T  833271 cgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgt 833370  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| || ||| |||||||||    
T  833371 gtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatgaatttacacaaaatttcgaaggactaaattgatg 833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 5437859 - 5438056
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||    
T  5437859 cgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgt 5437958  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||| |||||||||    
T  5437959 gtcacgttaacctctgacaaagcgtaacacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaatttcgaaggactaaattgatg 5438056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 835082 - 834886
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||| ||||||    
T  835082 gtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtg 834983  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||| |||||||||    
T  834982 tcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaatttcgaaggactaaattgatg 834886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 20493881 - 20494072
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  20493881 tgaattttgcgaaatatctatttagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacg 20493980  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  20493981 ttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattggcaaggaccaaattgatg 20494072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 35401797 - 35401994
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  35401797 cgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagctggtctgttaacggaggtgacgt 35401896  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||  ||||||||||||    
T  35401897 gtaacgttaacctcttacaaaccttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaagcaccaaattgatg 35401994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 39345612 - 39345805
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  39345612 cgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtctctccgttaagttggtatgttaacggaggtgacgt 39345711  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaatt 194  Q
    || |||||||||||| |||| | ||||||| | ||||||||| ||||||||||||||| ||||||||||||| |||||| |||| || ||||||    
T  39345712 gtaacgttaacctcttacaaggcttaccacataagatgccacacaagcagggaccaaattgattgatttacagaaaattgccaaggatcaaatt 39345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 49524774 - 49524577
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  49524774 cgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtccttccgttaagttggtctgttaacggaggtgacgt 49524675  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| || | | ||||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  49524674 gtaacgttaacctcttaccaggcttaccacgtcatatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 49524577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 4169734 - 4169876
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| |||||    
T  4169734 cgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggtctgttaatggaggtgacgt 4169833  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacg 143  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  4169834 gtcacgttaacctctgacaaagcttaccacgtcagatgccacg 4169876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 54387915 - 54387728
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||||||||||| | |||||||  |||||||||||||||| ||||||||||| | |||||||||||||| |||||||||||| || ||||  ||||    
T  54387915 aattttgcgaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagttcatccgttaagttggtctgttaacggaggtga-gtgtaccgtt 54387817  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||||||| |||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||    
T  54387816 aacctcttacaaggcttaccacgtcaaatgccacgcaagcagggactaaactgattgatttacagaaaattgccaaggaccaaattgat 54387728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 42982493 - 42982315
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||   | || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  42982493 cgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgt 42982394  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatt 179  Q
    || ||||| |||| | ||||   ||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||    
T  42982393 gtaacgttgaccttttacaagccttaccacgtcagatgccacacaagcagggaccaaattgattgatttagagaaaatt 42982315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 48645303 - 48645499
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||||||||||| | |||||||  |||||||||||||||  ||||||||||| |||||||| | ||||| |||||||| ||| |||||    
T  48645303 cgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatcaaatcagtacctccgttcaattggtctgttaacgaaggtgacgt 48645402  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||   |||||||||| |||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||  ||| || |||||||||    
T  48645403 gtattgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggatcaaattgat 48645499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 11254175 - 11254344
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||||||||| |   || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||    
T  11254175 aattttgcgaaatagctcttttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgatgtgtaacgtt 11254274  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatt 179  Q
     | |||| |||| | |||||||||||||||||| |||||||||||||||| |||| ||||| || ||||||    
T  11254275 -atctcttacaaggcttaccacgtcagatgccatgcaagcagggaccaaattgatggattttcataaaatt 11254344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 20820041 - 20820176
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||| ||||||  | ||||||||||||||| ||||||||||||||||||||| | |||||||||||||  ||||||| |||| |||||      ||    
T  20820041 aattttgcaaaatatttatttagtccctgaattttcaaaatgtcaatcaaatcagttcatccgttaagttggcctgttaacagaggtgacgt------tt 20820134  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcag 150  Q
    |||| || |||| | ||||||| |||||| ||||||||||||    
T  20820135 aaccgcttacaaggcttaccacatcagataccacgcaagcag 20820176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 2691429 - 2691566
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||| ||||||| | |||||||||||||||  |||||||||||||||||||||  |||||||||||||  |||||| ||||| || |||   ||||    
T  2691429 aattttgcaaaatatctatttagtccctgaatttttaaaatgtcaatcaaatcagtcaatccgttaagttggcctgttaagggaggtgatgtgcatcgtt 2691528  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaa 146  Q
    || | || ||||   ||||||||||| |||||||||||    
T  2691529 aatcgcttacaagacttaccacgtcaaatgccacgcaa 2691566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 4172298 - 4172357
Alignment:
Q  139 ccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  4172298 ccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 4172357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43519472 - 43519543
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||| ||| |||||||| ||||||||||    
T  43519472 cgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgt 43519543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 41759492 - 41759555
Alignment:
Q  39 atttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| ||| |||| |||||||    
T  41759492 atttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgtcaacagaggtgacgtgt 41759555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 43520966 - 43520919
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  43520966 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 43520919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 230484 - 230635
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||| |||| |||||||||||||||||||| ||||||||   | ||||| ||||| | |||||||| ||| | || |  ||||||||| |  |||||    
T  230484 cgtccctcaattatgcgaaatatcaaattagtctctgaatttggcatatgtcgatcaatttagtccctctgttcaatttgggtgttaacggtgctgacgt 230583  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcaggga 153  Q
    | | ||||||||||| |||  | |  ||| |||||||||||| ||||||||||    
T  230584 ggc-cgttaacctctcacatgggtctccatgtcagatgccacacaagcaggga 230635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 320757 - 320710
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  320757 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 320710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 833455 - 833502
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  833455 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 833502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 834899 - 834852
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  834899 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 834852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 4173597 - 4173550
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  4173597 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 4173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 5438043 - 5438090
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  5438043 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 5438090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 11642067 - 11642016
Alignment:
Q  51 tcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    |||||||| ||||||| || |||||||||| ||||||||||||| |||||||    
T  11642067 tcaatcaattcagtccatctgttaagttggcttgttaacggaggtgacgtgt 11642016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 33264615 - 33264662
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  33264615 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 33264662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 33265867 - 33265820
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  33265867 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 33265820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 43507399 - 43507446
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  43507399 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 43507446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 43508510 - 43508463
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  43508510 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 43508463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 319520 - 319553
Alignment:
Q  166 atttacacaaaatttccaatgaccaaattgatga 199  Q
    ||||||||||||||||||| ||||||||||||||    
T  319520 atttacacaaaatttccaaggaccaaattgatga 319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 26397952 - 26397819
Alignment:
Q  16 cgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctct 115  Q
    |||||||||| ||||||  ||||| ||   ||||||||||||||| |||| ||||||||||||||  | ||||||| |  |||||||   ||||||||||    
T  26397952 cgaaatatcacattagtttctgaagttgtcaaatgtcaatcaaattagtctctccgttaagttgggatattaacggtgatgacgtgttctgttaacctct 26397853  T
Q  116 gacaaagtttaccacgtcagatgccacgcaagca 149  Q
     |||| | ||  || |||||||| ||| ||||||    
T  26397852 cacaaggcttgtcatgtcagatgtcacacaagca 26397819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39923050 - 39922993
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  39923050 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 39922993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42879323 - 42879388
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtcc 66  Q
    ||||||| |||| ||||||||||||| ||| ||| |||||||   ||||||||||||| |||||||    
T  42879323 cgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgtcaatcaagtcagtcc 42879388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49523172 - 49523213
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||| |||||||||||||||||| | |||||||||||||||    
T  49523172 cgtccatgaattttgcgaaatatctatttagtccctgaattt 49523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 25995140 - 25995084
Alignment:
Q  16 cgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||| |||| |||||||||  |||||||||||||| | | |||||||||    
T  25995140 cgaaatatcaaaatagttcctgaatttgtaaaatgtcaatcaatttattccctccgt 25995084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 27626770 - 27626714
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    |||| |||||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  27626770 gtccatgaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 27626714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 37481078 - 37481034
Alignment:
Q  28 ttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||  ||||||||||||||| ||||| |||||    
T  37481078 ttagtccctgaatttaacaaatgtcaatcaaattagtccttccgt 37481034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 5e-89; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 26223635 - 26223832
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||    
T  26223635 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggtctgttaacggaggtgacgt 26223734  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  26223735 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttaaacaaaatttccaaggaccaaattgatg 26223832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 37346001 - 37345806
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  37346001 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgt 37345902  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  37345901 aatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgacttacacaaaatttccaaggaccaaattgatg 37345806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 27089320 - 27089123
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  27089320 cgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtcaatcaaatcagtccttccgttaagttggtttgttaacggaggtgacgt 27089221  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27089220 gtaacgttaacctctgacaaagcttaccacgttagatgccacgcaagcaggaaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 27089123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 46582058 - 46582255
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  46582058 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 46582157  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||  ||||||||||||    
T  46582158 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaaatgatagatttacacaaaattttcaagaaccaaattgatg 46582255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 4854458 - 4854655
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| || ||    
T  4854458 cgtccctgaattttgcgaaagatcaaattagtccctgaatttacaaaatttcaatcaaatcagtcactccgttaagttggtctgttaacggaggtgatgt 4854557  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4854558 gtaacgttaacctctgacaaagcttaccacgtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 4854655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 25276796 - 25276987
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacg 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | |    
T  25276796 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatg 25276895  T
Q  107 ttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  25276896 ttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 25276987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 8167990 - 8168186
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  8167990 cgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 8168089  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || ||| |||||||||    
T  8168090 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagta-ggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 8168186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 34776617 - 34776814
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  34776617 cgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatttcaatcagatcagtccctccgttaagttggtctgttaacggaggtgacgt 34776716  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34776717 gtaacgttaacctctgacaaagcttaacacgtcagatgaaacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 34776814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 1444221 - 1444025
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||    
T  1444221 gtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtg 1444122  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||    
T  1444121 tcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatg 1444025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 8169609 - 8169412
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  8169609 cgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgt 8169510  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || ||| |||||||||    
T  8169509 gtcacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgattcacacaaaatttcgaaggacgaaattgatg 8169412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 47011504 - 47011701
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||  |||||||||||| |||||    
T  47011504 cgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtcaatcaactcagtccctccgttaatttggcctgttaacggaggtgacgt 47011603  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  47011604 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 47011701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 9120087 - 9120284
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  |||||||| || |||||    
T  9120087 cgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacgggggtgacgt 9120186  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||    
T  9120187 gtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatg 9120284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 33599266 - 33599463
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  33599266 cgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacgt 33599365  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || || ||||||||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33599366 gtaactttaacctcttacaaaacttaccacgtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 33599463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 2871117 - 2870920
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||| | | || |||  |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |||||    
T  2871117 cgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttgctctgttaacggaagtgacgt 2871018  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||| | ||||||||||||||||||| ||||||||||||||| |||||||||| || |||||| |||| |||||||||||||    
T  2871017 gtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgattgatttgcagaaaattgccaaggaccaaattgatg 2870920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 2 - 194
Target Start/End: Original strand, 31236868 - 31237060
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  31236868 gtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtctgttaatggaggtgacgtg 31236967  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaatt 194  Q
    | ||||||||| || |||| | |||||||||||||| |||||||||||| ||||||| ||||||||||||| ||||||  ||| |||||||||    
T  31236968 taacgttaaccgcttacaaggcttaccacgtcagataccacgcaagcagagaccaaattgattgatttacataaaattgtcaaggaccaaatt 31237060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 45044993 - 45045165
Alignment:
Q  26 aattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagttt 125  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||| |||||||||||| |||| | ||    
T  45044993 aattcgtccctgaatttacaaaatgtcaatcaaattagtctctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggctt 45045092  T
Q  126 accacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||  ||||||||||||    
T  45045093 accacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaagaaccaaattgatg 45045165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 6 - 198
Target Start/End: Original strand, 51894620 - 51894812
Alignment:
Q  6 ctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcac 105  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |     
T  51894620 ctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaat 51894719  T
Q  106 gttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||| |||| ||||   ||||||| ||||||||||||| ||||||||||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  51894720 gttaaactcttacaagacttaccacatcagatgccacgccagcagggaccaaattgattgatttacagaaaattgtcaacgaccaaattgatg 51894812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 3011907 - 3012100
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||  ||||||| |    
T  3011907 cctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttggtctattaacggagatgacgtgtaa 3012006  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||| |||| | ||| |||||||||| |||||||||||| ||||||| ||||||||||||| |||||| | || |||||||||||||    
T  3012007 cgttaacctcttacaaggcttatcacgtcagataccacgcaagcagagaccaaattgattgatttacagaaaattgctaaggaccaaattgatg 3012100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 52641936 - 52642132
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||  | |||||||   ||||||||||||||  |||||||||||||||||||||||||||| | |||||||||| ||| |    
T  52641936 cgtccctgaattttgcgaaatatatatttagtcctcaaatttacaaaatgttcatcaaatcagtccctccgttaagttggtatattaacggaggtgacat 52642035  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    ||  ||||||| ||| |||||  ||||||||||||||||||| ||||||||||||||| |||||||||| || |||||||| |||||||||||||||    
T  52642036 gtaccgttaacttcttacaaaacttaccacgtcagatgccacacaagcagggaccaaattgattgattttcagaaaatttctaatgaccaaattgat 52642132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 50554211 - 50554408
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||  ||||| | | ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||| || |||||    
T  50554211 cgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtcaatcaaatcagtcccttcgttaagttggtctgttaacgggggtgacgt 50554310  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||  | ||||||||||| ||| || ||||  |||||||||| |||||||||||||||||||| |||| |||||||||||||    
T  50554311 gtaacgttaacctcttacatggcttaccacgtcaaatgtcatgcaataagggaccaaattgattgatttacacaaaattgccaaggaccaaattgatg 50554408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 37088173 - 37087981
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||||||||| | | || |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| |    
T  37088173 cctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggtgatgacgtgtaa 37088074  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
     |||||||||| ||||   |||||| |||||||||||| |||| |||||||||| ||||||||||| | ||||||  ||| | ||||||||||    
T  37088073 agttaacctcttacaagacttaccaagtcagatgccacacaagtagggaccaaattgattgatttagagaaaattgtcaagggccaaattgat 37087981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 23577692 - 23577882
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||| |||||||| ||||  |||||||||||| |||||||||||||    
T  23577692 aattttgcgaaatatcaaattagtcaatgaatttgcaaaatgtcaaccaaatcagtccgtccgttaaattggcctgttaacggaggtgacgtgtcacgtt 23577791  T
Q  109 aacctctgacaaagtttaccac-----gtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaatt 194  Q
    |||||||||||||| |||||||     ||||||| |||||||| ||||||  || || |||||||| |||||| |||| || ||| |||||    
T  23577792 aacctctgacaaagcttaccacgtcaagtcagatcccacgcaaccagggaaaaagcttattgatttgcacaaattttcgaaggacgaaatt 23577882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 6816906 - 6817053
Alignment:
Q  23 tcaaattagtccctgaattta-caaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaa 121  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||| |||||||||||| ||||     
T  6816906 tcaaattcgtccctgaattttgcaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacatgtaacgttaacctcttacaag 6817005  T
Q  122 gtttaccacgtcagatgccacgcaagcagggaccaaactgattgattt 169  Q
    | ||||||||||||||||||||||| || |||||||| |||| |||||    
T  6817006 ggttaccacgtcagatgccacgcaaacaaggaccaaattgatagattt 6817053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 20945013 - 20944934
Alignment:
Q  119 aaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||||    
T  20945013 aaagcttaccacgtcagatgccacgcaagcagggatcaaactgattgatttacacaaaatttcgaaggacgaaattgatg 20944934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47013158 - 47013087
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||||| |||||||||||||||||||||||||||   ||| ||| |||||||||||||||||||    
T  47013158 cgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgt 47013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4856042 - 4856001
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4856042 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 4856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34778214 - 34778173
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34778214 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 34778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 46583631 - 46583591
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46583631 gtccctgaattttgcgaaatatcaaattagtccctgaattt 46583591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9121744 - 9121673
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||| |||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  9121744 cgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 9121673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33602720 - 33602679
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  33602720 cgtccctgaattttgtgaaatatcaaattagtccctgaattt 33602679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 51123590 - 51123541
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  51123590 aattttgcgaaatatcaatttcgtccctgaatttataaaatgtcaatcaa 51123541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 37345819 - 37345772
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  37345819 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 37345772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 27089135 - 27089089
Alignment:
Q  152 gaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||    
T  27089135 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 27089089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 51896227 - 51896157
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||||||||| | |||||||||||||||   | ||||| ||||||  |||||||||||    
T  51896227 gtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctccgt 51896157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 6577140 - 6577091
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    |||| ||||||||||||| ||| ||||||||||||| |||||||||||||    
T  6577140 aattatgcgaaatatcaatttaatccctgaatttactaaatgtcaatcaa 6577091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 27087332 - 27087372
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  27087332 gtccctgaattttgcgaaatatctatttagtccctgaattt 27087372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 31238570 - 31238530
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  31238570 gtccctgaattttgcgaaatatctatttagtccctgaattt 31238530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 8168173 - 8168220
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  8168173 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 8168220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 8169425 - 8169378
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  8169425 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 8169378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 25276974 - 25277021
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  25276974 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 25277021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 25277008 - 25277055
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||| ||||||||||| |||||||||||||    
T  25277008 ggaccaaattgatggatttacataaaatttccaaggaccaaattgatg 25277055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 26223819 - 26223866
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||| ||| |||||||||||||    
T  26223819 ggaccaaattgatggatttacacaaaattttcaacgaccaaattgatg 26223866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 35009700 - 35009625
Alignment:
Q  16 cgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacgg 91  Q
    |||||||||| ||||||||||||| ||   ||||||||||||||| |||| || ||| |||||||  |||||||||    
T  35009700 cgaaatatcacattagtccctgaagttgtcaaatgtcaatcaaattagtctcttcgtcaagttgggatgttaacgg 35009625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 3369513 - 3369571
Alignment:
Q  36 tgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggagg 94  Q
    ||||||||| | |||||||||||||  ||| ||||||||||||||  ||||||||||||    
T  3369513 tgaatttaccacatgtcaatcaaattcgtcactccgttaagttggcctgttaacggagg 3369571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3013552 - 3013511
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||| |||||||||||||||||| | |||||||||||||||    
T  3013552 cgtccatgaattttgcgaaatatctatttagtccctgaattt 3013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5784910 - 5784853
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  5784910 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 5784853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 15104493 - 15104530
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||| | |||||||||||||||    
T  15104493 cctgaattttgcgaaatatctatttagtccctgaattt 15104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 52643691 - 52643650
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  52643691 cgtccctgaattttgcgaaatatttatttagtccctgaattt 52643650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 35478136 - 35478192
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    |||||| |||| ||| ||||||||| ||| ||||||||||||  |||||||||||||    
T  35478136 gtccctcaattatgcaaaatatcaatttaatccctgaatttattaaatgtcaatcaa 35478192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 2e-88; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 21843032 - 21842836
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| ||||||    
T  21843032 gtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttttttttttaacggaggtgacgtg 21842933  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21842932 ttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaatgaccaaattgatg 21842836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 40782252 - 40782055
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||||| |||||    
T  40782252 cgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgt 40782153  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  40782152 gtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 40782055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 7269487 - 7269290
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  |||||||||||| | |||||||||||| |||||    
T  7269487 cgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgttaatcaaatcagtcagtccgttaagttgatctgttaacggaggtgacgt 7269388  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7269387 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 7269290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 17577974 - 17577779
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |||||||    
T  17577974 tccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggtctgttaacggagctgacgtgt 17577875  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17577874 aacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 17577779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 29620186 - 29620383
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||||| |||||    
T  29620186 cgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgt 29620285  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||    
T  29620286 gtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatg 29620383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 2852934 - 2853110
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  2852934 cgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 2853033  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaa 177  Q
    || ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  2853034 gtaacgttaacctctgacaaagcttaccacttcagatgccacgcaagcaggaaccaaactgattgatttacgcaaaa 2853110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 12738773 - 12738580
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  12738773 cctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaa 12738674  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||| |||    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  12738673 cgttaacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 12738580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 12801596 - 12801403
Alignment:
Q  5 cctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtca 104  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  12801596 cctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaa 12801497  T
Q  105 cgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||| |||    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  12801496 cgttaacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 12801403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 42471596 - 42471793
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | |||||||||||| |||| | ||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||| |||||    
T  42471596 cgtccctgaattattcgaaatatcaaaatagtacatgaatttacaaaatgtcaatcaaattagtccctctgttaaattggtctgttaacggaggtgacgt 42471695  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  42471696 gtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 42471793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28813806 - 28813608
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  28813806 cgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaaattggtgtgttaacggaggtgacgt 28813707  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatga 199  Q
    || |||||||||||| |||| | ||||||||| ||||| ||||||||||| ||||||| ||||||||||||| |||||| |||| ||||||||||||||    
T  28813706 gtaacgttaacctcttacaaggcttaccacgttagatgtcacgcaagcagcgaccaaattgattgatttacagaaaattgccaaggaccaaattgatga 28813608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 30463948 - 30464145
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||| |||||    
T  30463948 cgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatatcaatcaaatcagtccctctgttaagttggtctgtttacggaggtgacgt 30464047  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||| | |||||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  30464048 gtaacgttaacctcttacaaggcttaccatgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 30464145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 8541312 - 8541129
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||    
T  8541312 cgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgatgt 8541213  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaa 184  Q
    || |||||||||||| |||| | ||||||||||||||| || |||||||||||||||| ||||||||||||| |||||| ||||    
T  8541212 gtaacgttaacctcttacaaggcttaccacgtcagatgtcatgcaagcagggaccaaattgattgatttacagaaaattgccaa 8541129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28822131 - 28821948
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||  | | || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||    
T  28822131 cgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaagtgacgt 28822032  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaa 184  Q
    || |||||||||||| |||| | |||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||| ||||    
T  28822031 gtaacgttaacctcttacaaggcttaccatgtcagatgccaagcaagcagggaccaaattgattgatttacagaaaattgccaa 28821948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 32134285 - 32134482
Alignment:
Q  7 tgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctc-----cgttaagttggtttgttaacggaggcgacgtg 101  Q
    |||||||||  ||||||| | |||||||||||||||| |||||||||||||||||||||  ||      ||||||||||| |||||||||||| ||||||    
T  32134285 tgaattttgtaaaatatctatttagtccctgaatttataaaatgtcaatcaaatcagtctatctgttaagttaagttggtctgttaacggaggtgacgtg 32134384  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatga 199  Q
    | |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||    
T  32134385 taacgttaacctcttacaaagcttatcacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatga 32134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 34328868 - 34328695
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||| ||||| | | || |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || |||||    
T  34328868 cgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcgctccgttaagttggtctgttaacggtggtgacgt 34328769  T
Q  101 gtcacgttaacctctgacaa----agtttaccacgtcagatgccacgcaagcagggaccaaactgattgattta 170  Q
    || |||||||||||| ||||    || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  34328768 gtaacgttaacctcttacaaggctagcttaccacgtcagatgccacgcaagcagggaccaaattgattgattta 34328695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 24539933 - 24540007
Alignment:
Q  124 ttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  24539933 ttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 24540007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 27077477 - 27077367
Alignment:
Q  32 tccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagtttaccacg 131  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||  |||||| ||||| |||||||   |||||||||| |||| | || ||| |    
T  27077477 tccctgaatttaccaaatgtcaatcaaatcggtccctccgttaagttggcatgttaatggaggtgacgtgtactgttaacctctcacaaggcttgccatg 27077378  T
Q  132 tcagatgccac 142  Q
    |||||||||||    
T  27077377 tcagatgccac 27077367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 41493900 - 41494045
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    ||||||| |||||||| | ||||||| ||||| | |||||||||||||||||| |||| |||||||||||||  |||||||||||  |||||||  ||||    
T  41493900 aattttgtgaaatatctatttagtccatgaatattcaaaatgtcaatcaaatccgtccatccgttaagttggcctgttaacggagatgacgtgtaccgtt 41493999  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggac 154  Q
    |||  || |||| | | ||||| ||||||| ||| |||||| ||||    
T  41494000 aactgcttacaaggctcaccacatcagatgtcacacaagcatggac 41494045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40780598 - 40780669
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||||| |||||||||||||||||||||||||||   ||| ||| |||||||||||||||||||    
T  40780598 cgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgt 40780669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29621857 - 29621786
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  29621857 cgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 29621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24541288 - 24541247
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24541288 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 24541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 1344849 - 1344786
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||| |||||||||||| |||||| |||||||  |||||||||||||| | |||||||||||    
T  1344849 aattttacgaaatatcaaaatagtccttgaatttgtaaaatgtcaatcaatttagtccctccgt 1344786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 17577792 - 17577745
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  17577792 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 17577745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 24539994 - 24540041
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  24539994 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 24540041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17574366 - 17574407
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  17574366 cgtccctgaattttgcgaaatatctatttagtccctgaattt 17574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32835924 - 32835981
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| ||||||||||||  |||||||||||||    
T  32835924 cgtcccttaattatgcgaaatatcaatttaatccctgaatttattaaatgtcaatcaa 32835981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 2181591 - 2181540
Alignment:
Q  147 gcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||| ||||| ||||||| |||||| |||| |||||||||||||    
T  2181591 gcagggaccaaattgattaatttacagaaaattgccaaggaccaaattgatg 2181540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42473683 - 42473612
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||| | |||||||||||| ||||||||||||||   | | ||| ||||||||||||| |||||    
T  42473683 cgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtccatcaaatcagtccttccgt 42473612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 43492172 - 43492133
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  43492172 tccctgaattttgcgaaatatctatttagtccctgaattt 43492133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 21842848 - 21842802
Alignment:
Q  152 gaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||| |||| |||||||||||||||| ||| |||||||||||||    
T  21842848 gaccaaattgatggatttacacaaaattttcaaggaccaaattgatg 21842802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2854402 - 2854362
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  2854402 cgtccctgaatttttcgaaa-atcaaattagtccctgaattt 2854362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7267891 - 7267932
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||| ||||||||||||||||||| | |||||||||||||||    
T  7267891 cgtcactgaattttgcgaaatatctatttagtccctgaattt 7267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18625084 - 18625043
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||| |||||||| | |||||||||||||||    
T  18625084 cgtccctgaattttgtgaaatatctatttagtccctgaattt 18625043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18726613 - 18726670
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||||||||| |||||   |||||||||||||    
T  18726613 cgtccctcaattatgcgaaatatcaatttagtcccttaatttgttaaatgtcaatcaa 18726670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18728678 - 18728637
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||| |||| ||||||||||||| |||||||||||||||    
T  18728678 cgtcccttaattatgcgaaatatcaacttagtccctgaattt 18728637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32089968 - 32089911
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  32089968 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 32089911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33257803 - 33257746
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  33257803 cgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 33257746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34327683 - 34327724
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||| ||||||||||||||||||| | |||||||||||||||    
T  34327683 cgtcgctgaattttgcgaaatatctatttagtccctgaattt 34327724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36057689 - 36057648
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||| ||||||||||    
T  36057689 cgtccctgaattttgcgaaatatctatttagaccctgaattt 36057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38596916 - 38596957
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||| |||| ||||||||||||| |||||||||||||||    
T  38596916 cgtccctcaattatgcgaaatatcaacttagtccctgaattt 38596957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 3e-84; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 24205646 - 24205843
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||    
T  24205646 cgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttcagttggtctgttaacggaggtgacgt 24205745  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  24205746 gtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 24205843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 40561919 - 40561722
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  40561919 cgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtcaatcaaatcggtccctccgttaagttggtttgttaacggaggtgacgt 40561820  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||    
T  40561819 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacacaacatttccaaggaccaaattgatg 40561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 16764652 - 16764456
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||    
T  16764652 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttg-tctgttaacggaggtgacgt 16764554  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  16764553 gtaacgttaacctctgacaaagcttaccatgtcagatgtcacgcaagcagagaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 16764456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 14387397 - 14387594
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |  |||||| | ||| |||||    
T  14387397 cgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaataagtccctccgttaaattagactgttaaagaaggtgacgt 14387496  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14387497 gtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 14387594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 2577521 - 2577324
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||| |||||    
T  2577521 cgtccctgaattttttgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtctgttaacagaggtgacgt 2577422  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||    
T  2577421 gtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactaattgatttacacaaaatttcgaaggacgaaattgatg 2577324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 37022226 - 37022029
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||| | |||||    
T  37022226 cgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaagtgacgt 37022127  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||    
T  37022126 gtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatg 37022029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 6783412 - 6783586
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  6783412 cgtccctgaattattcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattattccctccgttaagttggtctgttaacggaggtgacgt 6783511  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaa 175  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6783512 gtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaa 6783586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 19906730 - 19906927
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||    
T  19906730 cgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaaccgaggtgacgt 19906829  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||  | ||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  19906830 gtaacgttaacctcttacatggcttaccacgtcagatgccacgcaaacagggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 19906927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 39663202 - 39663397
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  39663202 cgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgt 39663301  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||  | ||||||||||||||| |||||||||||||| |||| ||||||||||  ||| |||| |||| |||||||||||||    
T  39663302 gtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcagggatcaaattgattgattt--acataattgccaaggaccaaattgatg 39663397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 42517614 - 42517802
Alignment:
Q  10 attttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtta 109  Q
    ||||| ||||||| | | || |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||| ||||||    
T  42517614 attttacgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcccttcgttaagttggtctgttaacggaggtgacgtgtaacgtta 42517713  T
Q  110 acctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||  |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||| || ||||||||||    
T  42517714 acctcatacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggagcaaattgatg 42517802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 16376784 - 16376981
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||  || |    
T  16376784 cgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtctattaacagaggtaacat 16376883  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     | |||||||||||| |||| | ||||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  16376884 ttaacgttaacctcttacaaggcttaccacgtcatatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 16376981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 39456821 - 39456624
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    ||||| |||||||||| ||||| | | |||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  39456821 cgtccatgaattttgcaaaatagctatttagtccctgaatttataaaatgtcaatcaaatcagtccatccgttaagttggtctgttaacggaggtgacgt 39456722  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || || ||||||||| |||| | ||||||||||| ||| ||||||||||||||||||| ||||||||||| | ||||||  ||| ||| |||||||||    
T  39456721 gtaacattaacctcttacaaggcttaccacgtcatatgtcacgcaagcagggaccaaattgattgatttatagaaaattgtcaaggactaaattgatg 39456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 6799449 - 6799251
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt-caatcaaatcagtccctccgttaagttggtttgttaacggaggcgacg 99  Q
    ||||| |||||||||| ||||| | | || |||| |||||||| ||||| | |||||||||||||||||||||||||||||| ||||||||| || ||||    
T  6799449 cgtccatgaattttgccaaatagctattttgtccttgaatttataaaattttcaatcaaatcagtccctccgttaagttggtctgttaacggtggtgacg 6799350  T
Q  100 tgtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||| |||||||||||| |||| | |||||||| ||||||||||||||| |||||||||  ||||||||||| | |||||| |||| |||||||||||||    
T  6799349 tgtaacgttaacctcttacaaggcttaccacgccagatgccacgcaagtagggaccaagttgattgatttagagaaaattgccaaggaccaaattgatg 6799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 19581463 - 19581658
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    ||||||||||||||||||||||| | |||||||  |||||||| ||||||| ||||||||||||  ||||||||||| || |||||||||||| ||| ||    
T  19581463 gtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtccatcaaatcagtctttccgttaagtttgtatgttaacggaggtgacatg 19581562  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    |    ||||| ||| |||| | ||||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||    
T  19581563 tactattaacttcttacaaggcttaccacgtcaaatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 19581658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 198
Target Start/End: Complemental strand, 17698120 - 17697953
Alignment:
Q  31 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagtttaccac 130  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| | | |||||||||| ||||||| ||||||| |||| | ||   |||||||    
T  17698120 gtccttgaatttacaaaatgtcaatcaaatcagtctctccgttaagttgatatattaacggaggtgacgtgtaacgttaatctcttaaaagacttaccac 17698021  T
Q  131 gtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || ||||| ||||||||||||||||||| | |||  |||||  ||||||  ||| |||||||||||||    
T  17698020 gttagatgtcacgcaagcagggaccaaattaattagtttactgaaaattgtcaaggaccaaattgatg 17697953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 37646511 - 37646366
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||| ||||||||||| | ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||  |||||||||| | ||| |||   |||    
T  37646511 aattctgcgaaatatctatttagtccctgaattttcaaaatgccaatcaaatcagtccctctgttaagttggcctgttaacggacgtgacatgtactgtt 37646412  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcagggac 154  Q
    |||| || |||| | ||||||||||||||| |||||||||||||||    
T  37646411 aaccgcttacaaggcttaccacgtcagatgtcacgcaagcagggac 37646366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 34400364 - 34400553
Alignment:
Q  3 tccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgt 102  Q
    |||||||||||||||||||| | | || |||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||  |||    
T  34400364 tccctgaattttgcgaaatagctattttgtccttgaatttacaaaatatcaatcaaatcggtccctccgttaagttggtctgttaacggaggtgatatgt 34400463  T
Q  103 cacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
     | ||| |||||| ||||   ||||||||||||||| |||||       ||||||| ||||||||||||| |||| |  ||| |||||||||||||    
T  34400464 aatgttgacctcttacaagacttaccacgtcagatgtcacgc------cgaccaaattgattgatttacagaaaaatgtcaaggaccaaattgatg 34400553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 31475113 - 31474972
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaa-tgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgt 107  Q
    ||||||| |||||||| | ||| ||||||||||| ||||| ||||||||||||| ||||||| |||||||||   |||||||||||| |||||||   ||    
T  31475113 aattttgagaaatatctatttaatccctgaattttcaaaaatgtcaatcaaatcggtccctctgttaagttgacatgttaacggaggtgacgtgtactgt 31475014  T
Q  108 taacctctgacaaagtttaccacgtcagatgccacgcaagca 149  Q
    ||||| || |||| | ||||||||||||||| ||||||||||    
T  31475013 taaccgcttacaatgcttaccacgtcagatgtcacgcaagca 31474972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 162108 - 161967
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtgtcacgtt 108  Q
    |||||| | ||||||| | ||||| | ||||||| ||||| ||||||||||||  ||| |||||||||||||| | |||||||||| ||| |||  ||||    
T  162108 aattttacaaaatatctatttagttcttgaattttcaaaacgtcaatcaaatcgatccatccgttaagttggtctattaacggaggtgacatgtaccgtt 162009  T
Q  109 aacctctgacaaagtttaccacgtcagatgccacgcaagcag 150  Q
    |||| || ||||   ||||||||||||||| |||||||||||    
T  162008 aaccgcttacaagacttaccacgtcagatgtcacgcaagcag 161967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14389180 - 14389109
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||||||||||||||| | ||||||||||||||| | ||||||| ||||||   ||||||||||    
T  14389180 cgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatggtccctccgt 14389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24208138 - 24208067
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||||||||||| | |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  24208138 cgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 24208067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 37020557 - 37020627
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    |||| ||||||||  ||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  37020557 gtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 37020627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16763124 - 16763165
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  16763124 cgtccctgaattttgcgaaatatctatttagtccctgaattt 16763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40560271 - 40560312
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  40560271 cgtccctgaattttgcgaaatatctatttagtccctgaattt 40560312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 6783587 - 6783634
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  6783587 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 6783634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 6786061 - 6786006
Alignment:
Q  17 gaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 72  Q
    ||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  6786061 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 6786006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 16764469 - 16764422
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| ||||||||||||||||| || |||||||||||||    
T  16764469 ggaccaaattgatggatttacacaaaatttctaaggaccaaattgatg 16764422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 24205830 - 24205877
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  24205830 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 24205877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41185 - 41128
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| ||||||||||||  || ||||||||||    
T  41185 cgtccctcaattatgcgaaatatcaatttaatccctgaatttattaattgtcaatcaa 41128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2766982 - 2767023
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||| |||||||||||||||||| | |||||||||||||||    
T  2766982 cgtccttgaattttgcgaaatatctatttagtccctgaattt 2767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11021581 - 11021638
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  11021581 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 11021638  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 17948962 - 17948913
Alignment:
Q  9 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    |||||||||||||||||| || |||| |||||||  ||||||||||||||    
T  17948962 aattttgcgaaatatcaatttcgtccttgaatttgtaaaatgtcaatcaa 17948913  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28248218 - 28248161
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 58  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  28248218 cgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 28248161  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 19908341 - 19908301
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    ||||||||||||||||||||||| | ||||||| |||||||    
T  19908341 gtccctgaattttgcgaaatatctatttagtccttgaattt 19908301  T

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Target: scaffold0081 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 54299 - 54102
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||||| |||||    
T  54299 cgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgt 54200  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||    
T  54199 gtcacgttaacctttgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatg 54102  T

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Target: scaffold1712 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 1030 - 1227
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||    
T  1030 cgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgt 1129  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| || ||| |||||||||    
T  1130 gtcacgttaacctctgacaaagcgtaccacgtcaaatgccacgcaagcagggaccaaattgatggatttacacaaaatttcgaaggactaaattgatg 1227  T

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Target: scaffold0345 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 1596 - 1401
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgt 100  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||   |||||    
T  1596 cgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgtcattcaaatcagtccctccgttaagttggtctgttaacgga--tgacgt 1499  T
Q  101 gtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    || |||||||||||| |||| | ||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||| |||| |||||||||||||    
T  1498 gtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 1401  T

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Target: scaffold0058 (Bit Score: 117; Significance: 8e-60; HSPs: 5)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 62 - 198
Target Start/End: Complemental strand, 7217 - 7081
Alignment:
Q  62 agtccctccgttaagttggtttgttaacggaggcgacgtgtcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactg 161  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7217 agtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactg 7118  T
Q  162 attgatttacacaaaatttccaatgaccaaattgatg 198  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7117 attgatttacacaaaatttccaaggaccaaattgatg 7081  T

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Target: scaffold0058; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14384 - 14293
Alignment:
Q  1 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacgga 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14384 cgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacgga 14293  T

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Target: scaffold0058; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 3343 - 3383
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3343 gtccctgaattttgcgaaatatcaaattagtccctgaattt 3383  T

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Target: scaffold0058; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 4515 - 4555
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaattt 42  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4515 gtccctgaattttgcgaaatatcaaattagtccctgaattt 4555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 7094 - 7047
Alignment:
Q  151 ggaccaaactgattgatttacacaaaatttccaatgaccaaattgatg 198  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||    
T  7094 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 7047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 106717 - 106903
Alignment:
Q  2 gtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggcgacgtg 101  Q
    |||| |||||||| ||||||||| | |||||  | ||||||||||||||||||||||||||||||||||||||||||||| ||||         ||||||    
T  106717 gtccatgaattttacgaaatatctatttagtttccgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgtt---------gacgtg 106807  T
Q  102 tcacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaatgaccaaattgat 197  Q
    |  |||| |||||| |||| | ||||||||| ||||| ||||||||||||||||||| ||||||||||||  ||||||  ||| ||||||||||||    
T  106808 taccgttgacctcttacaaggcttaccacgttagatgtcacgcaagcagggaccaaattgattgatttacgtaaaattgtcaaggaccaaattgat 106903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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