View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2438_high_5 (Length: 250)
Name: NF2438_high_5
Description: NF2438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2438_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 35563886 - 35563647
Alignment:
| Q |
1 |
cacacccttttttcttaaagtaggttacacctaaaataatagaattattcctttaaaagaataattagctatcaaaatgagaatttgaaaaataaaccca |
100 |
Q |
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| T |
35563886 |
cacacccttttttcttaaagtaggttacacctaaaataatagaataattcctttaaaagaataattagctatcaaaatgagaatttgaaaaataaatccg |
35563787 |
T |
|
| Q |
101 |
tctccaatttttagacaaatttaataatttctttgcaaataatactaacatttgttgtttaaatttattttgcaaacatattggttagatttttattttg |
200 |
Q |
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|||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35563786 |
tctctaatttttagacaaatttcataatttctttgcaaacaatactaacatttgttgtttaaatttattttgcaaacatattggttagatttttattttg |
35563687 |
T |
|
| Q |
201 |
gacaaaattagttagaatgttgatcaaagaatagtctctg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
35563686 |
gacaaaattagttagaatgttgatcaaagaatagtctctg |
35563647 |
T |
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