View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2438_high_6 (Length: 239)
Name: NF2438_high_6
Description: NF2438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2438_high_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 35564153 - 35563927
Alignment:
| Q |
18 |
aaatcagggatgtattttaagacacgtgaaattgttaccggaatgctcannnnnnnctgcaacatcaacatggaataaaatatatattaatgacaatatt |
117 |
Q |
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| T |
35564153 |
aaatcagggatgtattttaagacacgtgaaattgttaccggaatgctcatttttttctgcaacatcaacatggaataaaatatatattaatgacaatatt |
35564054 |
T |
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| Q |
118 |
ttatgtgcaaagttt-----caatattatattgatatgattccattcatattatgaatacgtcactttcatttctataaaagaaaatgtcattttcaatt |
212 |
Q |
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| T |
35564053 |
ttatgtgcaaagtttaatttcaattttatattgatatgattccattcatattatgaatacgtcactttcatttctataaaagaaaatgtcattttcaatt |
35563954 |
T |
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| Q |
213 |
tatactgtgacatagttccaaaacatt |
239 |
Q |
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| T |
35563953 |
tatactgtgacatagttccaaaacatt |
35563927 |
T |
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